mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-6c5wdpkx because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:43:16,907 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:43:17,861 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:43:18,051 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:44:09,600 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:44:09,722 - cnv_pipe.batch.run_model - INFO - Processing cluster 646 with 189 probes
2026-06-03 05:44:10,210 - cnv_pipe.batch.run_model.cluster646 - INFO - Child process started for cluster 646 with 189 probes
2026-06-03 05:49:42,384 - cnv_pipe.batch.run_model.cluster646 - INFO - Child process finished cluster 646. Wrote cluster_646_samples.csv and cluster_646_params.csv
2026-06-03 05:49:42,386 - cnv_pipe.batch.run_model - INFO - Cluster 646 finished in 332.66 seconds. Status: SUCCESS