mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-bn6w49n_ because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:43:37,348 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:43:38,202 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:43:38,385 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:44:20,655 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:44:20,874 - cnv_pipe.batch.run_model - INFO - Processing cluster 712 with 199 probes
2026-06-03 05:44:21,243 - cnv_pipe.batch.run_model.cluster712 - INFO - Child process started for cluster 712 with 199 probes
2026-06-03 05:50:08,799 - cnv_pipe.batch.run_model.cluster712 - INFO - Child process finished cluster 712. Wrote cluster_712_samples.csv and cluster_712_params.csv
2026-06-03 05:50:08,802 - cnv_pipe.batch.run_model - INFO - Cluster 712 finished in 347.93 seconds. Status: SUCCESS