mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-goz_jdfa because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:43:13,664 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:43:14,751 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:43:14,960 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:44:07,904 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:44:08,200 - cnv_pipe.batch.run_model - INFO - Processing cluster 620 with 179 probes
2026-06-03 05:44:08,673 - cnv_pipe.batch.run_model.cluster620 - INFO - Child process started for cluster 620 with 179 probes
2026-06-03 05:49:17,219 - cnv_pipe.batch.run_model.cluster620 - INFO - Child process finished cluster 620. Wrote cluster_620_samples.csv and cluster_620_params.csv
2026-06-03 05:49:17,221 - cnv_pipe.batch.run_model - INFO - Cluster 620 finished in 309.02 seconds. Status: SUCCESS