mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-27_t82r1 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:42:06,315 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:42:07,190 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:42:07,383 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:42:54,255 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:42:54,510 - cnv_pipe.batch.run_model - INFO - Processing cluster 437 with 195 probes
2026-06-03 05:42:54,942 - cnv_pipe.batch.run_model.cluster437 - INFO - Child process started for cluster 437 with 195 probes
2026-06-03 05:48:48,773 - cnv_pipe.batch.run_model.cluster437 - INFO - Child process finished cluster 437. Wrote cluster_437_samples.csv and cluster_437_params.csv
2026-06-03 05:48:48,776 - cnv_pipe.batch.run_model - INFO - Cluster 437 finished in 354.27 seconds. Status: SUCCESS