mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-jurii14i because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:44:45,063 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:44:46,102 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:44:46,304 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:45:39,421 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:45:39,730 - cnv_pipe.batch.run_model - INFO - Processing cluster 900 with 181 probes
2026-06-03 05:45:40,249 - cnv_pipe.batch.run_model.cluster900 - INFO - Child process started for cluster 900 with 181 probes
2026-06-03 05:50:37,233 - cnv_pipe.batch.run_model.cluster900 - INFO - Child process finished cluster 900. Wrote cluster_900_samples.csv and cluster_900_params.csv
2026-06-03 05:50:37,235 - cnv_pipe.batch.run_model - INFO - Cluster 900 finished in 297.50 seconds. Status: SUCCESS