mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-bqm788am because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:43:28,197 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:43:29,146 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:43:29,332 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:44:20,951 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:44:21,091 - cnv_pipe.batch.run_model - INFO - Processing cluster 670 with 151 probes
2026-06-03 05:44:21,790 - cnv_pipe.batch.run_model.cluster670 - INFO - Child process started for cluster 670 with 151 probes
2026-06-03 05:49:02,371 - cnv_pipe.batch.run_model.cluster670 - INFO - Child process finished cluster 670. Wrote cluster_670_samples.csv and cluster_670_params.csv
2026-06-03 05:49:02,373 - cnv_pipe.batch.run_model - INFO - Cluster 670 finished in 281.28 seconds. Status: SUCCESS