mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-rfp194ga because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:43:10,869 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:43:11,864 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:43:12,062 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:44:03,964 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:44:04,254 - cnv_pipe.batch.run_model - INFO - Processing cluster 607 with 183 probes
2026-06-03 05:44:04,721 - cnv_pipe.batch.run_model.cluster607 - INFO - Child process started for cluster 607 with 183 probes
2026-06-03 05:49:34,152 - cnv_pipe.batch.run_model.cluster607 - INFO - Child process finished cluster 607. Wrote cluster_607_samples.csv and cluster_607_params.csv
2026-06-03 05:49:34,154 - cnv_pipe.batch.run_model - INFO - Cluster 607 finished in 329.90 seconds. Status: SUCCESS