mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-lwkr_aga because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:44:17,266 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:44:18,064 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:44:18,246 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:45:02,590 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:45:02,697 - cnv_pipe.batch.run_model - INFO - Processing cluster 789 with 168 probes
2026-06-03 05:45:03,266 - cnv_pipe.batch.run_model.cluster789 - INFO - Child process started for cluster 789 with 168 probes
2026-06-03 05:50:01,530 - cnv_pipe.batch.run_model.cluster789 - INFO - Child process finished cluster 789. Wrote cluster_789_samples.csv and cluster_789_params.csv
2026-06-03 05:50:01,533 - cnv_pipe.batch.run_model - INFO - Cluster 789 finished in 298.84 seconds. Status: SUCCESS