mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-vv2xvec_ because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:42:50,647 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:42:51,748 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:42:51,952 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:43:48,424 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:43:48,537 - cnv_pipe.batch.run_model - INFO - Processing cluster 546 with 151 probes
2026-06-03 05:43:49,239 - cnv_pipe.batch.run_model.cluster546 - INFO - Child process started for cluster 546 with 151 probes
2026-06-03 05:48:13,899 - cnv_pipe.batch.run_model.cluster546 - INFO - Child process finished cluster 546. Wrote cluster_546_samples.csv and cluster_546_params.csv
2026-06-03 05:48:13,901 - cnv_pipe.batch.run_model - INFO - Cluster 546 finished in 265.36 seconds. Status: SUCCESS