stdout.txt - Workdir - call-multicov-156

File Info

Filename: stdout.txt
Full Path: s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/8a/8ac632fe8d73ae95ec72750c11bfbf9f/stdout.txt
Size: 369 bytes
Task: call-multicov-156
Attempt

Content

Current Conda environment: bedtools
Concatenated BED files:  /tmp/miniwdl_task/work/_miniwdl_inputs/0/smn_hg38.bed /tmp/miniwdl_task/work/_miniwdl_inputs/0/gba_hg38.bed /tmp/miniwdl_task/work/_miniwdl_inputs/0/cyp21_hg38.bed
bedtools multicov -q 0 -bams /tmp/miniwdl_task/work/_miniwdl_inputs/0/downloaded.bam -bed concatenated.bed > 3599843959_sv1_multicov_output.tsv