work/3574108764_sv1_basic_stats.tsv - Workdir - call-prepare_allele_exp_inputs

Filename: work/3574108764_sv1_basic_stats.tsv
Full Path: s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/b2/b2370ffc5f508c9dfb9aeec2df0f3d78/work/3574108764_sv1_basic_stats.tsv
Size: 1.4 KB
Task: call-prepare_allele_exp_inputs
Attempt

name	reads	unmapped	frac_unmapped	unique_reads	frac_dupes	pairs	frac_reads_on_target	frac_reads_off_target	frac_pairs_on_target	frac_pairs_off_target	frag_size_q20	frag_size_median	frag_size_q80	proper_pairs	frac_proper_pairs	pairs_on_target	pairs_off_target	reads_on_target	reads_off_target	frag_size_mean	frag_size_std	dupes	n_q20	n_q25	n_q30	n_bases	bed	saturation_at_1000000_reads	gc_0.0	gc_0.05	gc_0.1	gc_0.15	gc_0.2	gc_0.25	gc_0.3	gc_0.35	gc_0.4	gc_0.45	gc_0.5	gc_0.55	gc_0.6	gc_0.65	gc_0.7	gc_0.75	gc_0.8	gc_0.85	gc_0.9	gc_0.95	gc_1.0	min_depth	mean_depth	cv_depth	max_depth	q1_depth	q5_depth	q50_depth	q95_depth	q99_depth	lt100x	lt700x	n_bases_gt30x	n_bases_gt100x	frac_bases_gt30x	frac_bases_gt100x	roi_size	contam	n_sites	loglik	lrt	bed_base_count
3574108764_sv1	36299764	64934	0.001789	27763958	0.235148	13844848	0.754469	0.243192	0.877351	0.122649	214	323	484	13415061	0.968957	11769712	1645349	20947038	6751986	354.312277	127.218201	8535806	0.977784	0.94203	0.94203	5435224500	horizon_dec2024.widened_active_targets.low_depth_removed_050625.CDS_region_patch.bed	207099	0.164871	0.0	0.151456	0.190136	0.27039	0.363594	0.842866	1.183343	1.012004	0.907355	1.009228	1.013605	0.978892	1.118153	1.034513	0.89275	0.601566	0.285233	0.37215	0.0	0.0	0.0	292.697279	0.314933	1118.0	83.0	118.0	294.0	485.0	553.0	0.02327	0.999043	6347005	6218316	1.00	0.97673	6366463	0.0181	720	-3297.3879	520.2182	6388832

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