work/3574108782_sv1_basic_stats.tsv - Workdir - call-prepare_allele_exp_inputs

Filename: work/3574108782_sv1_basic_stats.tsv
Full Path: s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/b2/b2370ffc5f508c9dfb9aeec2df0f3d78/work/3574108782_sv1_basic_stats.tsv
Size: 1.4 KB
Task: call-prepare_allele_exp_inputs
Attempt

name	reads	unmapped	frac_unmapped	unique_reads	frac_dupes	pairs	frac_reads_on_target	frac_reads_off_target	frac_pairs_on_target	frac_pairs_off_target	frag_size_q20	frag_size_median	frag_size_q80	proper_pairs	frac_proper_pairs	pairs_on_target	pairs_off_target	reads_on_target	reads_off_target	frag_size_mean	frag_size_std	dupes	n_q20	n_q25	n_q30	n_bases	bed	saturation_at_1000000_reads	gc_0.0	gc_0.05	gc_0.1	gc_0.15	gc_0.2	gc_0.25	gc_0.3	gc_0.35	gc_0.4	gc_0.45	gc_0.5	gc_0.55	gc_0.6	gc_0.65	gc_0.7	gc_0.75	gc_0.8	gc_0.85	gc_0.9	gc_0.95	gc_1.0	min_depth	mean_depth	cv_depth	max_depth	q1_depth	q5_depth	q50_depth	q95_depth	q99_depth	lt100x	lt700x	n_bases_gt30x	n_bases_gt100x	frac_bases_gt30x	frac_bases_gt100x	roi_size	contam	n_sites	loglik	lrt	bed_base_count
3574108782_sv1	35685196	50449	0.001414	28268900	0.207826	14104768	0.7521	0.246115	0.870318	0.129682	220	324	479	13738864	0.974058	11957179	1781685	21261050	6957401	355.136795	122.603531	7416296	0.978707	0.94373	0.94373	5345212050	horizon_dec2024.widened_active_targets.low_depth_removed_050625.CDS_region_patch.bed	210840	0.18634	0.0	0.140642	0.211049	0.261654	0.3692	0.86743	1.208188	1.022935	0.906177	1.001227	0.993544	0.955794	1.098495	1.030512	0.924562	0.614573	0.303468	0.443667	0.0	0.0	0.0	300.600222	0.31677	1443.0	83.0	119.0	304.0	492.0	559.0	0.023207	0.998896	6346961	6218714	1.00	0.976793	6366463	0.0052	675	-1496.7923	61.1817	6388832

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