work/3574108799_sv1_basic_stats.tsv - Workdir - call-prepare_allele_exp_inputs

Filename: work/3574108799_sv1_basic_stats.tsv
Full Path: s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/b2/b2370ffc5f508c9dfb9aeec2df0f3d78/work/3574108799_sv1_basic_stats.tsv
Size: 1.4 KB
Task: call-prepare_allele_exp_inputs
Attempt

name	reads	unmapped	frac_unmapped	unique_reads	frac_dupes	pairs	frac_reads_on_target	frac_reads_off_target	frac_pairs_on_target	frac_pairs_off_target	frag_size_q20	frag_size_median	frag_size_q80	proper_pairs	frac_proper_pairs	pairs_on_target	pairs_off_target	reads_on_target	reads_off_target	frag_size_mean	frag_size_std	dupes	n_q20	n_q25	n_q30	n_bases	bed	saturation_at_1000000_reads	gc_0.0	gc_0.05	gc_0.1	gc_0.15	gc_0.2	gc_0.25	gc_0.3	gc_0.35	gc_0.4	gc_0.45	gc_0.5	gc_0.55	gc_0.6	gc_0.65	gc_0.7	gc_0.75	gc_0.8	gc_0.85	gc_0.9	gc_0.95	gc_1.0	min_depth	mean_depth	cv_depth	max_depth	q1_depth	q5_depth	q50_depth	q95_depth	q99_depth	lt100x	lt700x	n_bases_gt30x	n_bases_gt100x	frac_bases_gt30x	frac_bases_gt100x	roi_size	contam	n_sites	loglik	lrt	bed_base_count
3574108799_sv1	31076800	44191	0.001422	24153961	0.222766	12050616	0.748363	0.249808	0.86917	0.13083	217	325	485	11691913	0.970234	10162259	1529654	18075927	6033843	356.428255	126.409386	6922839	0.977809	0.941762	0.941762	4654891350	horizon_dec2024.widened_active_targets.low_depth_removed_050625.CDS_region_patch.bed	180420	0.17018	0.0	0.180848	0.215704	0.26227	0.361836	0.846002	1.191458	1.021618	0.914033	1.013255	1.002267	0.963776	1.098953	1.02842	0.896142	0.599348	0.306687	0.367792	0.0	0.0	0.0	253.815683	0.31853	1556.0	69.0	100.0	255.0	419.0	476.0	0.049775	0.999326	6345966	6049573	1.00	0.950225	6366463	0.0065	734	-1583.5573	93.2306	6388832

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