work/3574108809_sv1_basic_stats.tsv - Workdir - call-prepare_allele_exp_inputs

Filename: work/3574108809_sv1_basic_stats.tsv
Full Path: s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/b2/b2370ffc5f508c9dfb9aeec2df0f3d78/work/3574108809_sv1_basic_stats.tsv
Size: 1.4 KB
Task: call-prepare_allele_exp_inputs
Attempt

name	reads	unmapped	frac_unmapped	unique_reads	frac_dupes	pairs	frac_reads_on_target	frac_reads_off_target	frac_pairs_on_target	frac_pairs_off_target	frag_size_q20	frag_size_median	frag_size_q80	proper_pairs	frac_proper_pairs	pairs_on_target	pairs_off_target	reads_on_target	reads_off_target	frag_size_mean	frag_size_std	dupes	n_q20	n_q25	n_q30	n_bases	bed	saturation_at_1000000_reads	gc_0.0	gc_0.05	gc_0.1	gc_0.15	gc_0.2	gc_0.25	gc_0.3	gc_0.35	gc_0.4	gc_0.45	gc_0.5	gc_0.55	gc_0.6	gc_0.65	gc_0.7	gc_0.75	gc_0.8	gc_0.85	gc_0.9	gc_0.95	gc_1.0	min_depth	mean_depth	cv_depth	max_depth	q1_depth	q5_depth	q50_depth	q95_depth	q99_depth	lt100x	lt700x	n_bases_gt30x	n_bases_gt100x	frac_bases_gt30x	frac_bases_gt100x	roi_size	contam	n_sites	loglik	lrt	bed_base_count
3574108809_sv1	41713484	59743	0.001432	31780677	0.23812	15855855	0.742071	0.256049	0.867975	0.132025	221	332	495	15316746	0.965999	13294552	2022194	23583516	8137418	362.999198	128.458099	9932807	0.977125	0.939463	0.939463	6248061150	horizon_dec2024.widened_active_targets.low_depth_removed_050625.CDS_region_patch.bed	236116	0.152258	0.0	0.145062	0.202428	0.278123	0.367727	0.862371	1.197153	1.01907	0.909553	1.00342	1.006297	0.966674	1.097079	1.024252	0.884403	0.601269	0.276163	0.343906	0.0	0.0	0.0	331.96842	0.316846	1824.0	92.0	131.0	336.0	543.0	618.0	0.014618	0.997768	6346864	6273398	1.00	0.985382	6366463	0.0091	579	-1941.3078	177.5293	6388832

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