work/3574108896_sv1_basic_stats.tsv - Workdir - call-prepare_allele_exp_inputs

Filename: work/3574108896_sv1_basic_stats.tsv
Full Path: s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/b2/b2370ffc5f508c9dfb9aeec2df0f3d78/work/3574108896_sv1_basic_stats.tsv
Size: 1.4 KB
Task: call-prepare_allele_exp_inputs
Attempt

name	reads	unmapped	frac_unmapped	unique_reads	frac_dupes	pairs	frac_reads_on_target	frac_reads_off_target	frac_pairs_on_target	frac_pairs_off_target	frag_size_q20	frag_size_median	frag_size_q80	proper_pairs	frac_proper_pairs	pairs_on_target	pairs_off_target	reads_on_target	reads_off_target	frag_size_mean	frag_size_std	dupes	n_q20	n_q25	n_q30	n_bases	bed	saturation_at_1000000_reads	gc_0.0	gc_0.05	gc_0.1	gc_0.15	gc_0.2	gc_0.25	gc_0.3	gc_0.35	gc_0.4	gc_0.45	gc_0.5	gc_0.55	gc_0.6	gc_0.65	gc_0.7	gc_0.75	gc_0.8	gc_0.85	gc_0.9	gc_0.95	gc_1.0	min_depth	mean_depth	cv_depth	max_depth	q1_depth	q5_depth	q50_depth	q95_depth	q99_depth	lt100x	lt700x	n_bases_gt30x	n_bases_gt100x	frac_bases_gt30x	frac_bases_gt100x	roi_size	contam	n_sites	loglik	lrt	bed_base_count
3574108896_sv1	31002964	44296	0.001429	23623988	0.238009	11785765	0.747479	0.250646	0.878407	0.121593	238	339	492	11424434	0.969342	10035303	1389131	17658434	5921258	370.107841	121.486809	7378976	0.977885	0.941959	0.941959	4643800200	horizon_dec2024.widened_active_targets.low_depth_removed_050625.CDS_region_patch.bed	186521	0.095487	0.0	0.120243	0.133534	0.245415	0.364926	0.850397	1.186169	0.995479	0.910766	1.012923	1.01675	0.990401	1.113709	1.03728	0.87317	0.594801	0.314105	0.371844	0.0	0.0	0.0	253.821787	0.360312	1068.0	56.0	89.0	251.0	440.0	501.0	0.070302	0.999409	6363479	5918885	1.00	0.929698	6366463	0.005	670	-1296.1949	55.1714	6388832

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