work/3574109544_sv1_basic_stats.tsv - Workdir - call-prepare_allele_exp_inputs

Filename: work/3574109544_sv1_basic_stats.tsv
Full Path: s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/b2/b2370ffc5f508c9dfb9aeec2df0f3d78/work/3574109544_sv1_basic_stats.tsv
Size: 1.4 KB
Task: call-prepare_allele_exp_inputs
Attempt

name	reads	unmapped	frac_unmapped	unique_reads	frac_dupes	pairs	frac_reads_on_target	frac_reads_off_target	frac_pairs_on_target	frac_pairs_off_target	frag_size_q20	frag_size_median	frag_size_q80	proper_pairs	frac_proper_pairs	pairs_on_target	pairs_off_target	reads_on_target	reads_off_target	frag_size_mean	frag_size_std	dupes	n_q20	n_q25	n_q30	n_bases	bed	saturation_at_1000000_reads	gc_0.0	gc_0.05	gc_0.1	gc_0.15	gc_0.2	gc_0.25	gc_0.3	gc_0.35	gc_0.4	gc_0.45	gc_0.5	gc_0.55	gc_0.6	gc_0.65	gc_0.7	gc_0.75	gc_0.8	gc_0.85	gc_0.9	gc_0.95	gc_1.0	min_depth	mean_depth	cv_depth	max_depth	q1_depth	q5_depth	q50_depth	q95_depth	q99_depth	lt100x	lt700x	n_bases_gt30x	n_bases_gt100x	frac_bases_gt30x	frac_bases_gt100x	roi_size	contam	n_sites	loglik	lrt	bed_base_count
3574109544_sv1	28947048	68376	0.002362	23100742	0.201966	11511225	0.74964	0.2474	0.85971	0.14029	196	305	465	11219767	0.974681	9645748	1574019	17317232	5715134	337.358946	126.649612	5846306	0.976719	0.940028	0.940028	4331800800	horizon_dec2024.widened_active_targets.low_depth_removed_050625.CDS_region_patch.bed	175187	0.142526	0.0	0.148603	0.173037	0.238454	0.349823	0.82393	1.164204	1.000218	0.900796	1.010308	1.01441	0.990952	1.153554	1.092975	0.996502	0.67031	0.32893	0.349133	0.0	0.0	0.0	236.816972	0.308217	1383.0	67.0	98.0	237.0	390.0	445.0	0.054068	0.999707	6345341	6022240	1.00	0.945932	6366463	0.0129	693	-1948.7801	232.6172	6388832

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