work/3574109570_sv1_basic_stats.tsv - Workdir - call-prepare_allele_exp_inputs

Filename: work/3574109570_sv1_basic_stats.tsv
Full Path: s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/b2/b2370ffc5f508c9dfb9aeec2df0f3d78/work/3574109570_sv1_basic_stats.tsv
Size: 1.4 KB
Task: call-prepare_allele_exp_inputs
Attempt

name	reads	unmapped	frac_unmapped	unique_reads	frac_dupes	pairs	frac_reads_on_target	frac_reads_off_target	frac_pairs_on_target	frac_pairs_off_target	frag_size_q20	frag_size_median	frag_size_q80	proper_pairs	frac_proper_pairs	pairs_on_target	pairs_off_target	reads_on_target	reads_off_target	frag_size_mean	frag_size_std	dupes	n_q20	n_q25	n_q30	n_bases	bed	saturation_at_1000000_reads	gc_0.0	gc_0.05	gc_0.1	gc_0.15	gc_0.2	gc_0.25	gc_0.3	gc_0.35	gc_0.4	gc_0.45	gc_0.5	gc_0.55	gc_0.6	gc_0.65	gc_0.7	gc_0.75	gc_0.8	gc_0.85	gc_0.9	gc_0.95	gc_1.0	min_depth	mean_depth	cv_depth	max_depth	q1_depth	q5_depth	q50_depth	q95_depth	q99_depth	lt100x	lt700x	n_bases_gt30x	n_bases_gt100x	frac_bases_gt30x	frac_bases_gt100x	roi_size	contam	n_sites	loglik	lrt	bed_base_count
3574109570_sv1	37385726	57527	0.001539	30288439	0.189839	15110570	0.755401	0.2427	0.863903	0.136097	197	302	461	14693087	0.972371	12693397	1999690	22879909	7351003	335.472334	124.790428	7097287	0.977037	0.940916	0.940916	5599229850	horizon_dec2024.widened_active_targets.low_depth_removed_050625.CDS_region_patch.bed	227284	0.160631	0.0	0.152641	0.203651	0.25826	0.363655	0.848056	1.179049	1.0057	0.903545	1.004748	1.007257	0.980634	1.131469	1.071931	0.964972	0.654051	0.316936	0.346491	0.0	0.0	0.0	314.066441	0.308994	1414.0	91.0	130.0	316.0	515.0	588.0	0.015133	0.997995	6346581	6270117	1.00	0.984867	6366463	0.0108	687	-2179.1739	220.6556	6388832

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