work/3574154988_sv1_basic_stats.tsv - Workdir - call-prepare_allele_exp_inputs

Filename: work/3574154988_sv1_basic_stats.tsv
Full Path: s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/b2/b2370ffc5f508c9dfb9aeec2df0f3d78/work/3574154988_sv1_basic_stats.tsv
Size: 1.4 KB
Task: call-prepare_allele_exp_inputs
Attempt

name	reads	unmapped	frac_unmapped	unique_reads	frac_dupes	pairs	frac_reads_on_target	frac_reads_off_target	frac_pairs_on_target	frac_pairs_off_target	frag_size_q20	frag_size_median	frag_size_q80	proper_pairs	frac_proper_pairs	pairs_on_target	pairs_off_target	reads_on_target	reads_off_target	frag_size_mean	frag_size_std	dupes	n_q20	n_q25	n_q30	n_bases	bed	saturation_at_1000000_reads	gc_0.0	gc_0.05	gc_0.1	gc_0.15	gc_0.2	gc_0.25	gc_0.3	gc_0.35	gc_0.4	gc_0.45	gc_0.5	gc_0.55	gc_0.6	gc_0.65	gc_0.7	gc_0.75	gc_0.8	gc_0.85	gc_0.9	gc_0.95	gc_1.0	min_depth	mean_depth	cv_depth	max_depth	q1_depth	q5_depth	q50_depth	q95_depth	q99_depth	lt100x	lt700x	n_bases_gt30x	n_bases_gt100x	frac_bases_gt30x	frac_bases_gt100x	roi_size	contam	n_sites	loglik	lrt	bed_base_count
3574154988_sv1	30756658	50608	0.001645	24409961	0.206352	12175216	0.76461	0.233317	0.871427	0.128573	199	301	449	11858850	0.974016	10334127	1524723	18664106	5695247	330.335586	118.383286	6346697	0.978266	0.944064	0.944064	4605907500	horizon_dec2024.widened_active_targets.low_depth_removed_050625.CDS_region_patch.bed	193668	0.069429	0.0	0.110572	0.109979	0.216001	0.342519	0.828806	1.165959	0.982795	0.904328	1.017543	1.033861	1.001575	1.140882	1.078852	0.941712	0.635337	0.331642	0.401145	0.0	0.0	0.0	257.285839	0.34671	1378.0	61.0	95.0	256.0	439.0	499.0	0.0577	0.999201	6364588	5999120	1.00	0.9423	6366463	0.0111	626	-1778.4982	194.7088	6388832

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