work/3574154990_sv1_basic_stats.tsv - Workdir - call-prepare_allele_exp_inputs

Filename: work/3574154990_sv1_basic_stats.tsv
Full Path: s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/b2/b2370ffc5f508c9dfb9aeec2df0f3d78/work/3574154990_sv1_basic_stats.tsv
Size: 1.4 KB
Task: call-prepare_allele_exp_inputs
Attempt

name	reads	unmapped	frac_unmapped	unique_reads	frac_dupes	pairs	frac_reads_on_target	frac_reads_off_target	frac_pairs_on_target	frac_pairs_off_target	frag_size_q20	frag_size_median	frag_size_q80	proper_pairs	frac_proper_pairs	pairs_on_target	pairs_off_target	reads_on_target	reads_off_target	frag_size_mean	frag_size_std	dupes	n_q20	n_q25	n_q30	n_bases	bed	saturation_at_1000000_reads	gc_0.0	gc_0.05	gc_0.1	gc_0.15	gc_0.2	gc_0.25	gc_0.3	gc_0.35	gc_0.4	gc_0.45	gc_0.5	gc_0.55	gc_0.6	gc_0.65	gc_0.7	gc_0.75	gc_0.8	gc_0.85	gc_0.9	gc_0.95	gc_1.0	min_depth	mean_depth	cv_depth	max_depth	q1_depth	q5_depth	q50_depth	q95_depth	q99_depth	lt100x	lt700x	n_bases_gt30x	n_bases_gt100x	frac_bases_gt30x	frac_bases_gt100x	roi_size	contam	n_sites	loglik	lrt	bed_base_count
3574154990_sv1	30620738	47107	0.001538	24531432	0.198862	12237759	0.766411	0.231668	0.871975	0.128025	206	301	444	11952470	0.976688	10422261	1530209	18801169	5683156	331.757872	114.629173	6089306	0.978751	0.94473	0.94473	4586044650	horizon_dec2024.widened_active_targets.low_depth_removed_050625.CDS_region_patch.bed	187625	0.155893	0.0	0.130682	0.192818	0.235297	0.354104	0.839205	1.170489	0.997625	0.891526	1.002736	1.005935	0.987059	1.164255	1.120525	1.040073	0.706908	0.34045	0.411598	0.0	0.0	0.0	261.066349	0.310594	1333.0	75.0	107.0	263.0	431.0	493.0	0.037055	0.999237	6346794	6130551	1.00	0.962945	6366463	0.0073	651	-1428.7138	101.5659	6388832

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