work/3574155015_sv1_basic_stats.tsv - Workdir - call-prepare_allele_exp_inputs

Filename: work/3574155015_sv1_basic_stats.tsv
Full Path: s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/b2/b2370ffc5f508c9dfb9aeec2df0f3d78/work/3574155015_sv1_basic_stats.tsv
Size: 1.4 KB
Task: call-prepare_allele_exp_inputs
Attempt

name	reads	unmapped	frac_unmapped	unique_reads	frac_dupes	pairs	frac_reads_on_target	frac_reads_off_target	frac_pairs_on_target	frac_pairs_off_target	frag_size_q20	frag_size_median	frag_size_q80	proper_pairs	frac_proper_pairs	pairs_on_target	pairs_off_target	reads_on_target	reads_off_target	frag_size_mean	frag_size_std	dupes	n_q20	n_q25	n_q30	n_bases	bed	saturation_at_1000000_reads	gc_0.0	gc_0.05	gc_0.1	gc_0.15	gc_0.2	gc_0.25	gc_0.3	gc_0.35	gc_0.4	gc_0.45	gc_0.5	gc_0.55	gc_0.6	gc_0.65	gc_0.7	gc_0.75	gc_0.8	gc_0.85	gc_0.9	gc_0.95	gc_1.0	min_depth	mean_depth	cv_depth	max_depth	q1_depth	q5_depth	q50_depth	q95_depth	q99_depth	lt100x	lt700x	n_bases_gt30x	n_bases_gt100x	frac_bases_gt30x	frac_bases_gt100x	roi_size	contam	n_sites	loglik	lrt	bed_base_count
3574155015_sv1	27252774	54063	0.001984	21035029	0.228151	10486157	0.742615	0.254815	0.866193	0.133807	219	327	490	10163522	0.969232	8803575	1359947	15620934	5360032	359.637388	127.735756	6217745	0.977301	0.940479	0.940479	4079806650	horizon_dec2024.widened_active_targets.low_depth_removed_050625.CDS_region_patch.bed	158679	0.126295	0.0	0.134519	0.192492	0.258464	0.350574	0.83718	1.174495	1.009694	0.905105	1.011343	1.013609	0.983595	1.125052	1.060256	0.933049	0.633276	0.298408	0.385346	0.0	0.0	0.0	220.210467	0.318863	1124.0	59.0	86.0	221.0	365.0	418.0	0.083245	0.999834	6345386	5836486	1.00	0.916755	6366463	0.0065	722	-1313.8582	79.747	6388832

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