work/3574155018_sv1_basic_stats.tsv - Workdir - call-prepare_allele_exp_inputs

Filename: work/3574155018_sv1_basic_stats.tsv
Full Path: s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/b2/b2370ffc5f508c9dfb9aeec2df0f3d78/work/3574155018_sv1_basic_stats.tsv
Size: 1.4 KB
Task: call-prepare_allele_exp_inputs
Attempt

name	reads	unmapped	frac_unmapped	unique_reads	frac_dupes	pairs	frac_reads_on_target	frac_reads_off_target	frac_pairs_on_target	frac_pairs_off_target	frag_size_q20	frag_size_median	frag_size_q80	proper_pairs	frac_proper_pairs	pairs_on_target	pairs_off_target	reads_on_target	reads_off_target	frag_size_mean	frag_size_std	dupes	n_q20	n_q25	n_q30	n_bases	bed	saturation_at_1000000_reads	gc_0.0	gc_0.05	gc_0.1	gc_0.15	gc_0.2	gc_0.25	gc_0.3	gc_0.35	gc_0.4	gc_0.45	gc_0.5	gc_0.55	gc_0.6	gc_0.65	gc_0.7	gc_0.75	gc_0.8	gc_0.85	gc_0.9	gc_0.95	gc_1.0	min_depth	mean_depth	cv_depth	max_depth	q1_depth	q5_depth	q50_depth	q95_depth	q99_depth	lt100x	lt700x	n_bases_gt30x	n_bases_gt100x	frac_bases_gt30x	frac_bases_gt100x	roi_size	contam	n_sites	loglik	lrt	bed_base_count
3574155018_sv1	33007524	50706	0.001536	25850717	0.216824	12895567	0.766327	0.231712	0.874379	0.125621	192	299	458	12571948	0.974905	10992647	1579301	19810091	5989920	332.217325	125.188225	7156807	0.978341	0.944409	0.944409	4943522700	horizon_dec2024.widened_active_targets.low_depth_removed_050625.CDS_region_patch.bed	192966	0.18495	0.0	0.185908	0.19844	0.251139	0.366176	0.851875	1.185907	1.013619	0.905969	1.00445	1.00154	0.973734	1.123597	1.052821	0.937978	0.623793	0.298165	0.344984	0.0	0.0	0.0	270.738235	0.304232	1393.0	80.0	114.0	271.0	445.0	509.0	0.02705	0.999279	6346347	6194248	1.00	0.97295	6366463	0.0073	598	-1493.7745	105.5891	6388832

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