work/3574155019_sv1_basic_stats.tsv - Workdir - call-prepare_allele_exp_inputs

Filename: work/3574155019_sv1_basic_stats.tsv
Full Path: s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/b2/b2370ffc5f508c9dfb9aeec2df0f3d78/work/3574155019_sv1_basic_stats.tsv
Size: 1.4 KB
Task: call-prepare_allele_exp_inputs
Attempt

name	reads	unmapped	frac_unmapped	unique_reads	frac_dupes	pairs	frac_reads_on_target	frac_reads_off_target	frac_pairs_on_target	frac_pairs_off_target	frag_size_q20	frag_size_median	frag_size_q80	proper_pairs	frac_proper_pairs	pairs_on_target	pairs_off_target	reads_on_target	reads_off_target	frag_size_mean	frag_size_std	dupes	n_q20	n_q25	n_q30	n_bases	bed	saturation_at_1000000_reads	gc_0.0	gc_0.05	gc_0.1	gc_0.15	gc_0.2	gc_0.25	gc_0.3	gc_0.35	gc_0.4	gc_0.45	gc_0.5	gc_0.55	gc_0.6	gc_0.65	gc_0.7	gc_0.75	gc_0.8	gc_0.85	gc_0.9	gc_0.95	gc_1.0	min_depth	mean_depth	cv_depth	max_depth	q1_depth	q5_depth	q50_depth	q95_depth	q99_depth	lt100x	lt700x	n_bases_gt30x	n_bases_gt100x	frac_bases_gt30x	frac_bases_gt100x	roi_size	contam	n_sites	loglik	lrt	bed_base_count
3574155019_sv1	30556796	42190	0.001381	23649348	0.226053	11799651	0.757184	0.241032	0.87742	0.12258	216	322	481	11488463	0.973627	10080203	1408260	17906918	5700240	354.227265	125.827728	6907448	0.978338	0.943047	0.943047	4577190900	horizon_dec2024.widened_active_targets.low_depth_removed_050625.CDS_region_patch.bed	186925	0.082773	0.0	0.102309	0.132879	0.230576	0.364414	0.852166	1.186099	0.992238	0.904416	1.007999	1.017952	0.992128	1.124551	1.060056	0.897676	0.604854	0.3023	0.411292	0.0	0.0	0.0	250.731181	0.352362	2017.0	58.0	91.0	248.0	431.0	492.0	0.065711	0.999129	6364658	5948114	1.00	0.934289	6366463	0.0198	703	-3001.3629	523.998	6388832

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