work/3574155022_sv1_basic_stats.tsv - Workdir - call-prepare_allele_exp_inputs

Filename: work/3574155022_sv1_basic_stats.tsv
Full Path: s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/b2/b2370ffc5f508c9dfb9aeec2df0f3d78/work/3574155022_sv1_basic_stats.tsv
Size: 1.4 KB
Task: call-prepare_allele_exp_inputs
Attempt

name	reads	unmapped	frac_unmapped	unique_reads	frac_dupes	pairs	frac_reads_on_target	frac_reads_off_target	frac_pairs_on_target	frac_pairs_off_target	frag_size_q20	frag_size_median	frag_size_q80	proper_pairs	frac_proper_pairs	pairs_on_target	pairs_off_target	reads_on_target	reads_off_target	frag_size_mean	frag_size_std	dupes	n_q20	n_q25	n_q30	n_bases	bed	saturation_at_1000000_reads	gc_0.0	gc_0.05	gc_0.1	gc_0.15	gc_0.2	gc_0.25	gc_0.3	gc_0.35	gc_0.4	gc_0.45	gc_0.5	gc_0.55	gc_0.6	gc_0.65	gc_0.7	gc_0.75	gc_0.8	gc_0.85	gc_0.9	gc_0.95	gc_1.0	min_depth	mean_depth	cv_depth	max_depth	q1_depth	q5_depth	q50_depth	q95_depth	q99_depth	lt100x	lt700x	n_bases_gt30x	n_bases_gt100x	frac_bases_gt30x	frac_bases_gt100x	roi_size	contam	n_sites	loglik	lrt	bed_base_count
3574155022_sv1	34036434	50784	0.001492	26836865	0.211525	13388591	0.758747	0.239361	0.868014	0.131986	199	307	467	13064533	0.975796	11340192	1724341	20362383	6423698	339.280222	125.983772	7199569	0.978559	0.943797	0.943797	5097847500	horizon_dec2024.widened_active_targets.low_depth_removed_050625.CDS_region_patch.bed	215020	0.072371	0.0	0.097886	0.13061	0.223298	0.337005	0.80927	1.150497	0.973652	0.901468	1.0193	1.037309	1.014772	1.166053	1.112206	0.985655	0.67963	0.344357	0.428657	0.0	0.0	0.0	279.952968	0.354368	1470.0	64.0	101.0	276.0	488.0	558.0	0.048166	0.998937	6365708	6059818	1.00	0.951834	6366463	0.0054	698	-1481.9036	78.0208	6388832

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