work/3574155047_sv1_basic_stats.tsv - Workdir - call-prepare_allele_exp_inputs

Filename: work/3574155047_sv1_basic_stats.tsv
Full Path: s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/b2/b2370ffc5f508c9dfb9aeec2df0f3d78/work/3574155047_sv1_basic_stats.tsv
Size: 1.4 KB
Task: call-prepare_allele_exp_inputs
Attempt

name	reads	unmapped	frac_unmapped	unique_reads	frac_dupes	pairs	frac_reads_on_target	frac_reads_off_target	frac_pairs_on_target	frac_pairs_off_target	frag_size_q20	frag_size_median	frag_size_q80	proper_pairs	frac_proper_pairs	pairs_on_target	pairs_off_target	reads_on_target	reads_off_target	frag_size_mean	frag_size_std	dupes	n_q20	n_q25	n_q30	n_bases	bed	saturation_at_1000000_reads	gc_0.0	gc_0.05	gc_0.1	gc_0.15	gc_0.2	gc_0.25	gc_0.3	gc_0.35	gc_0.4	gc_0.45	gc_0.5	gc_0.55	gc_0.6	gc_0.65	gc_0.7	gc_0.75	gc_0.8	gc_0.85	gc_0.9	gc_0.95	gc_1.0	min_depth	mean_depth	cv_depth	max_depth	q1_depth	q5_depth	q50_depth	q95_depth	q99_depth	lt100x	lt700x	n_bases_gt30x	n_bases_gt100x	frac_bases_gt30x	frac_bases_gt100x	roi_size	contam	n_sites	loglik	lrt	bed_base_count
3574155047_sv1	24780616	36369	0.001468	19540585	0.211457	9748355	0.770965	0.227174	0.87477	0.12523	191	293	446	9516776	0.976244	8324989	1191787	15065100	4439116	325.830628	121.323799	5240031	0.979029	0.94565	0.94565	3711637050	horizon_dec2024.widened_active_targets.low_depth_removed_050625.CDS_region_patch.bed	145017	0.176838	0.0	0.156218	0.212841	0.264156	0.378383	0.858108	1.186613	1.010395	0.897146	0.999334	1.000263	0.975459	1.131668	1.07177	0.976518	0.656662	0.334216	0.362425	0.0	0.0	0.0	204.002021	0.306778	1105.0	59.0	86.0	204.0	337.0	388.0	0.088251	0.999907	6345596	5804617	1.00	0.911749	6366463	0.0071	587	-1111.0484	74.7687	6388832

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