work/3579426061_sv1_basic_stats.tsv - Workdir - call-prepare_allele_exp_inputs

Filename: work/3579426061_sv1_basic_stats.tsv
Full Path: s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/b2/b2370ffc5f508c9dfb9aeec2df0f3d78/work/3579426061_sv1_basic_stats.tsv
Size: 1.4 KB
Task: call-prepare_allele_exp_inputs
Attempt

name	reads	unmapped	frac_unmapped	unique_reads	frac_dupes	pairs	frac_reads_on_target	frac_reads_off_target	frac_pairs_on_target	frac_pairs_off_target	frag_size_q20	frag_size_median	frag_size_q80	proper_pairs	frac_proper_pairs	pairs_on_target	pairs_off_target	reads_on_target	reads_off_target	frag_size_mean	frag_size_std	dupes	n_q20	n_q25	n_q30	n_bases	bed	saturation_at_1000000_reads	gc_0.0	gc_0.05	gc_0.1	gc_0.15	gc_0.2	gc_0.25	gc_0.3	gc_0.35	gc_0.4	gc_0.45	gc_0.5	gc_0.55	gc_0.6	gc_0.65	gc_0.7	gc_0.75	gc_0.8	gc_0.85	gc_0.9	gc_0.95	gc_1.0	min_depth	mean_depth	cv_depth	max_depth	q1_depth	q5_depth	q50_depth	q95_depth	q99_depth	lt100x	lt700x	n_bases_gt30x	n_bases_gt100x	frac_bases_gt30x	frac_bases_gt100x	roi_size	contam	n_sites	loglik	lrt	bed_base_count
3579426061_sv1	16215526	21332	0.001316	12014467	0.259076	5993376	0.689075	0.30915	0.874349	0.125651	252	421	637	5526239	0.922058	4831859	694380	8278867	3714268	449.306185	171.737457	4201059	0.969446	0.917534	0.917534	2429129100	horizon_dec2024.widened_active_targets.low_depth_removed_050625.CDS_region_patch.bed	91233	0.082281	0.0	0.101696	0.109803	0.317965	0.312488	0.754689	1.077524	0.943866	0.906943	1.042959	1.132644	1.106781	1.162929	1.053589	0.726564	0.547889	0.259126	0.332822	0.0	0.0	0.0	116.877945	0.386532	844.0	22.0	37.0	113.0	212.0	247.0	0.419493	0.999988	6200219	3695778	0.97	0.580507	6366463	0.006	736	-678.7162	39.3702	6388832

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