work/3579426078_sv1_basic_stats.tsv - Workdir - call-prepare_allele_exp_inputs

Filename: work/3579426078_sv1_basic_stats.tsv
Full Path: s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/b2/b2370ffc5f508c9dfb9aeec2df0f3d78/work/3579426078_sv1_basic_stats.tsv
Size: 1.4 KB
Task: call-prepare_allele_exp_inputs
Attempt

name	reads	unmapped	frac_unmapped	unique_reads	frac_dupes	pairs	frac_reads_on_target	frac_reads_off_target	frac_pairs_on_target	frac_pairs_off_target	frag_size_q20	frag_size_median	frag_size_q80	proper_pairs	frac_proper_pairs	pairs_on_target	pairs_off_target	reads_on_target	reads_off_target	frag_size_mean	frag_size_std	dupes	n_q20	n_q25	n_q30	n_bases	bed	saturation_at_1000000_reads	gc_0.0	gc_0.05	gc_0.1	gc_0.15	gc_0.2	gc_0.25	gc_0.3	gc_0.35	gc_0.4	gc_0.45	gc_0.5	gc_0.55	gc_0.6	gc_0.65	gc_0.7	gc_0.75	gc_0.8	gc_0.85	gc_0.9	gc_0.95	gc_1.0	min_depth	mean_depth	cv_depth	max_depth	q1_depth	q5_depth	q50_depth	q95_depth	q99_depth	lt100x	lt700x	n_bases_gt30x	n_bases_gt100x	frac_bases_gt30x	frac_bases_gt100x	roi_size	contam	n_sites	loglik	lrt	bed_base_count
3579426078_sv1	27898026	42477	0.001523	21375267	0.233807	10662238	0.73431	0.263702	0.875482	0.124518	228	350	526	10219704	0.958495	8947166	1272538	15696081	5636709	382.325399	138.593811	6522759	0.97576	0.936027	0.936027	4178332350	horizon_dec2024.widened_active_targets.low_depth_removed_050625.CDS_region_patch.bed	157479	0.148833	0.0	0.164678	0.191711	0.284699	0.354327	0.830427	1.17204	1.003637	0.903246	1.013981	1.030702	1.00165	1.122627	1.024733	0.851791	0.580274	0.276484	0.378024	0.0	0.0	0.0	221.320914	0.324598	939.0	59.0	86.0	221.0	371.0	429.0	0.083693	0.999471	6346493	5833633	1.00	0.916307	6366463	0.0107	664	-1653.5499	144.9796	6388832

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