work/3579426097_sv1_basic_stats.tsv - Workdir - call-prepare_allele_exp_inputs

Filename: work/3579426097_sv1_basic_stats.tsv
Full Path: s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/b2/b2370ffc5f508c9dfb9aeec2df0f3d78/work/3579426097_sv1_basic_stats.tsv
Size: 1.4 KB
Task: call-prepare_allele_exp_inputs
Attempt

name	reads	unmapped	frac_unmapped	unique_reads	frac_dupes	pairs	frac_reads_on_target	frac_reads_off_target	frac_pairs_on_target	frac_pairs_off_target	frag_size_q20	frag_size_median	frag_size_q80	proper_pairs	frac_proper_pairs	pairs_on_target	pairs_off_target	reads_on_target	reads_off_target	frag_size_mean	frag_size_std	dupes	n_q20	n_q25	n_q30	n_bases	bed	saturation_at_1000000_reads	gc_0.0	gc_0.05	gc_0.1	gc_0.15	gc_0.2	gc_0.25	gc_0.3	gc_0.35	gc_0.4	gc_0.45	gc_0.5	gc_0.55	gc_0.6	gc_0.65	gc_0.7	gc_0.75	gc_0.8	gc_0.85	gc_0.9	gc_0.95	gc_1.0	min_depth	mean_depth	cv_depth	max_depth	q1_depth	q5_depth	q50_depth	q95_depth	q99_depth	lt100x	lt700x	n_bases_gt30x	n_bases_gt100x	frac_bases_gt30x	frac_bases_gt100x	roi_size	contam	n_sites	loglik	lrt	bed_base_count
3579426097_sv1	31530320	38957	0.001236	24340359	0.228033	12147070	0.735646	0.262753	0.882334	0.117666	235	361	539	11617455	0.9564	10250474	1366981	17905896	6395506	391.963995	140.153992	7189961	0.975903	0.934953	0.934953	4723704450	horizon_dec2024.widened_active_targets.low_depth_removed_050625.CDS_region_patch.bed	188342	0.068414	0.0	0.091054	0.119336	0.268336	0.33163	0.809588	1.15122	0.975516	0.905017	1.026747	1.066371	1.031034	1.130015	1.034492	0.828389	0.579297	0.272952	0.39178	0.0	0.0	0.0	253.973259	0.366414	1390.0	54.0	87.0	250.0	443.0	508.0	0.075691	0.999169	6363319	5884576	1.00	0.924309	6366463	0.0144	656	-2369.1146	312.0535	6388832

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