work/3579426121_sv1_basic_stats.tsv - Workdir - call-prepare_allele_exp_inputs

Filename: work/3579426121_sv1_basic_stats.tsv
Full Path: s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/b2/b2370ffc5f508c9dfb9aeec2df0f3d78/work/3579426121_sv1_basic_stats.tsv
Size: 1.4 KB
Task: call-prepare_allele_exp_inputs
Attempt

name	reads	unmapped	frac_unmapped	unique_reads	frac_dupes	pairs	frac_reads_on_target	frac_reads_off_target	frac_pairs_on_target	frac_pairs_off_target	frag_size_q20	frag_size_median	frag_size_q80	proper_pairs	frac_proper_pairs	pairs_on_target	pairs_off_target	reads_on_target	reads_off_target	frag_size_mean	frag_size_std	dupes	n_q20	n_q25	n_q30	n_bases	bed	saturation_at_1000000_reads	gc_0.0	gc_0.05	gc_0.1	gc_0.15	gc_0.2	gc_0.25	gc_0.3	gc_0.35	gc_0.4	gc_0.45	gc_0.5	gc_0.55	gc_0.6	gc_0.65	gc_0.7	gc_0.75	gc_0.8	gc_0.85	gc_0.9	gc_0.95	gc_1.0	min_depth	mean_depth	cv_depth	max_depth	q1_depth	q5_depth	q50_depth	q95_depth	q99_depth	lt100x	lt700x	n_bases_gt30x	n_bases_gt100x	frac_bases_gt30x	frac_bases_gt100x	roi_size	contam	n_sites	loglik	lrt	bed_base_count
3579426121_sv1	17823058	25131	0.00141	14621398	0.179636	7294282	0.756763	0.241519	0.877368	0.122632	221	325	481	7088038	0.971725	6218818	869220	11064928	3531339	356.384474	123.404541	3201660	0.974541	0.931208	0.931208	2669689050	horizon_dec2024.widened_active_targets.low_depth_removed_050625.CDS_region_patch.bed	108032	0.166208	0.0	0.172268	0.202166	0.276831	0.366169	0.854327	1.190343	1.021608	0.907646	1.005082	1.004517	0.972655	1.105371	1.027269	0.883226	0.594372	0.290369	0.380893	0.0	0.0	0.0	155.151402	0.321719	745.0	41.0	60.0	156.0	256.0	292.0	0.209096	0.999994	6339585	5035259	1.00	0.790904	6366463	0.009	556	-831.7769	84.9457	6388832

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