work/3579426122_sv1_basic_stats.tsv - Workdir - call-prepare_allele_exp_inputs

Filename: work/3579426122_sv1_basic_stats.tsv
Full Path: s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/b2/b2370ffc5f508c9dfb9aeec2df0f3d78/work/3579426122_sv1_basic_stats.tsv
Size: 1.4 KB
Task: call-prepare_allele_exp_inputs
Attempt

name	reads	unmapped	frac_unmapped	unique_reads	frac_dupes	pairs	frac_reads_on_target	frac_reads_off_target	frac_pairs_on_target	frac_pairs_off_target	frag_size_q20	frag_size_median	frag_size_q80	proper_pairs	frac_proper_pairs	pairs_on_target	pairs_off_target	reads_on_target	reads_off_target	frag_size_mean	frag_size_std	dupes	n_q20	n_q25	n_q30	n_bases	bed	saturation_at_1000000_reads	gc_0.0	gc_0.05	gc_0.1	gc_0.15	gc_0.2	gc_0.25	gc_0.3	gc_0.35	gc_0.4	gc_0.45	gc_0.5	gc_0.55	gc_0.6	gc_0.65	gc_0.7	gc_0.75	gc_0.8	gc_0.85	gc_0.9	gc_0.95	gc_1.0	min_depth	mean_depth	cv_depth	max_depth	q1_depth	q5_depth	q50_depth	q95_depth	q99_depth	lt100x	lt700x	n_bases_gt30x	n_bases_gt100x	frac_bases_gt30x	frac_bases_gt100x	roi_size	contam	n_sites	loglik	lrt	bed_base_count
3579426122_sv1	34371658	60166	0.00175	25930764	0.245577	12929827	0.721501	0.276179	0.877428	0.122572	257	374	544	12298279	0.951156	10790850	1507429	18709064	7161534	404.920979	133.734329	8440894	0.973051	0.928604	0.928604	5146723800	horizon_dec2024.widened_active_targets.low_depth_removed_050625.CDS_region_patch.bed	200767	0.07269	0.0	0.088843	0.119148	0.281849	0.35131	0.833867	1.159734	0.975123	0.899323	1.014146	1.05787	1.025267	1.130798	1.055093	0.853361	0.600315	0.307939	0.39127	0.0	0.0	0.0	269.748486	0.369213	1324.0	57.0	91.0	265.0	470.0	536.0	0.065756	0.999386	6363766	5947830	1.00	0.934244	6366463	0.005	586	-1184.5128	52.5696	6388832

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