work/3579450862_sv1_basic_stats.tsv - Workdir - call-prepare_allele_exp_inputs

Filename: work/3579450862_sv1_basic_stats.tsv
Full Path: s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/b2/b2370ffc5f508c9dfb9aeec2df0f3d78/work/3579450862_sv1_basic_stats.tsv
Size: 1.4 KB
Task: call-prepare_allele_exp_inputs
Attempt

name	reads	unmapped	frac_unmapped	unique_reads	frac_dupes	pairs	frac_reads_on_target	frac_reads_off_target	frac_pairs_on_target	frac_pairs_off_target	frag_size_q20	frag_size_median	frag_size_q80	proper_pairs	frac_proper_pairs	pairs_on_target	pairs_off_target	reads_on_target	reads_off_target	frag_size_mean	frag_size_std	dupes	n_q20	n_q25	n_q30	n_bases	bed	saturation_at_1000000_reads	gc_0.0	gc_0.05	gc_0.1	gc_0.15	gc_0.2	gc_0.25	gc_0.3	gc_0.35	gc_0.4	gc_0.45	gc_0.5	gc_0.55	gc_0.6	gc_0.65	gc_0.7	gc_0.75	gc_0.8	gc_0.85	gc_0.9	gc_0.95	gc_1.0	min_depth	mean_depth	cv_depth	max_depth	q1_depth	q5_depth	q50_depth	q95_depth	q99_depth	lt100x	lt700x	n_bases_gt30x	n_bases_gt100x	frac_bases_gt30x	frac_bases_gt100x	roi_size	contam	n_sites	loglik	lrt	bed_base_count
3579450862_sv1	23116296	31986	0.001384	17183282	0.256659	8572391	0.723273	0.274866	0.874698	0.125302	247	376	555	8183865	0.954677	7158407	1025458	12428196	4723100	405.167394	141.29129	5933014	0.974203	0.929306	0.929306	3462646500	horizon_dec2024.widened_active_targets.low_depth_removed_050625.CDS_region_patch.bed	134519	0.075523	0.0	0.113285	0.118264	0.260546	0.335845	0.800293	1.141561	0.97117	0.907795	1.028489	1.068539	1.03756	1.144293	1.042041	0.821589	0.567121	0.263753	0.283212	0.0	0.0	0.0	177.168787	0.377374	821.0	35.0	57.0	173.0	317.0	365.0	0.190917	0.999981	6338231	5150996	1.00	0.809083	6366463	0.0041	578	-749.2731	26.8066	6388832

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