work/3579467449_sv1_basic_stats.tsv - Workdir - call-prepare_allele_exp_inputs

Filename: work/3579467449_sv1_basic_stats.tsv
Full Path: s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/b2/b2370ffc5f508c9dfb9aeec2df0f3d78/work/3579467449_sv1_basic_stats.tsv
Size: 1.4 KB
Task: call-prepare_allele_exp_inputs
Attempt

name	reads	unmapped	frac_unmapped	unique_reads	frac_dupes	pairs	frac_reads_on_target	frac_reads_off_target	frac_pairs_on_target	frac_pairs_off_target	frag_size_q20	frag_size_median	frag_size_q80	proper_pairs	frac_proper_pairs	pairs_on_target	pairs_off_target	reads_on_target	reads_off_target	frag_size_mean	frag_size_std	dupes	n_q20	n_q25	n_q30	n_bases	bed	saturation_at_1000000_reads	gc_0.0	gc_0.05	gc_0.1	gc_0.15	gc_0.2	gc_0.25	gc_0.3	gc_0.35	gc_0.4	gc_0.45	gc_0.5	gc_0.55	gc_0.6	gc_0.65	gc_0.7	gc_0.75	gc_0.8	gc_0.85	gc_0.9	gc_0.95	gc_1.0	min_depth	mean_depth	cv_depth	max_depth	q1_depth	q5_depth	q50_depth	q95_depth	q99_depth	lt100x	lt700x	n_bases_gt30x	n_bases_gt100x	frac_bases_gt30x	frac_bases_gt100x	roi_size	contam	n_sites	loglik	lrt	bed_base_count
3579467449_sv1	34110070	55617	0.001631	26827786	0.213494	13382174	0.7576	0.240326	0.881149	0.118851	223	327	483	12971655	0.969323	11429967	1541688	20324742	6447427	357.991022	123.085938	7282284	0.978566	0.943193	0.943193	5108167950	horizon_dec2024.widened_active_targets.low_depth_removed_050625.CDS_region_patch.bed	196616	0.148221	0.0	0.147308	0.207825	0.271622	0.368713	0.872842	1.209672	1.023975	0.909247	1.001138	0.998959	0.956569	1.09015	1.011153	0.873296	0.586815	0.281586	0.324717	0.0	0.0	0.0	287.644346	0.316433	1441.0	79.0	113.0	291.0	469.0	530.0	0.028989	0.999023	6346849	6181903	1.00	0.971011	6366463	0.0096	755	-2206.9202	186.3789	6388832

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