work/3579467454_sv1_basic_stats.tsv - Workdir - call-prepare_allele_exp_inputs

Filename: work/3579467454_sv1_basic_stats.tsv
Full Path: s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/b2/b2370ffc5f508c9dfb9aeec2df0f3d78/work/3579467454_sv1_basic_stats.tsv
Size: 1.4 KB
Task: call-prepare_allele_exp_inputs
Attempt

name	reads	unmapped	frac_unmapped	unique_reads	frac_dupes	pairs	frac_reads_on_target	frac_reads_off_target	frac_pairs_on_target	frac_pairs_off_target	frag_size_q20	frag_size_median	frag_size_q80	proper_pairs	frac_proper_pairs	pairs_on_target	pairs_off_target	reads_on_target	reads_off_target	frag_size_mean	frag_size_std	dupes	n_q20	n_q25	n_q30	n_bases	bed	saturation_at_1000000_reads	gc_0.0	gc_0.05	gc_0.1	gc_0.15	gc_0.2	gc_0.25	gc_0.3	gc_0.35	gc_0.4	gc_0.45	gc_0.5	gc_0.55	gc_0.6	gc_0.65	gc_0.7	gc_0.75	gc_0.8	gc_0.85	gc_0.9	gc_0.95	gc_1.0	min_depth	mean_depth	cv_depth	max_depth	q1_depth	q5_depth	q50_depth	q95_depth	q99_depth	lt100x	lt700x	n_bases_gt30x	n_bases_gt100x	frac_bases_gt30x	frac_bases_gt100x	roi_size	contam	n_sites	loglik	lrt	bed_base_count
3579467454_sv1	27462858	34679	0.001263	21779981	0.20693	10869155	0.755159	0.243249	0.881569	0.118431	230	334	490	10551711	0.970794	9302065	1249646	16447347	5297955	364.876931	122.73037	5682877	0.97849	0.942446	0.942446	4114226850	horizon_dec2024.widened_active_targets.low_depth_removed_050625.CDS_region_patch.bed	159500	0.140849	0.0	0.151113	0.211076	0.259909	0.36983	0.875016	1.218861	1.024432	0.903092	1.000781	0.993513	0.95469	1.088489	1.014372	0.891828	0.592844	0.26622	0.403729	0.0	0.0	0.0	233.491016	0.320614	1311.0	63.0	90.0	236.0	382.0	437.0	0.071322	0.999414	6346191	5912397	1.00	0.928678	6366463	0.0063	540	-1026.6764	68.2046	6388832

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