work/3579467511_sv1_basic_stats.tsv - Workdir - call-prepare_allele_exp_inputs

Filename: work/3579467511_sv1_basic_stats.tsv
Full Path: s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/b2/b2370ffc5f508c9dfb9aeec2df0f3d78/work/3579467511_sv1_basic_stats.tsv
Size: 1.4 KB
Task: call-prepare_allele_exp_inputs
Attempt

name	reads	unmapped	frac_unmapped	unique_reads	frac_dupes	pairs	frac_reads_on_target	frac_reads_off_target	frac_pairs_on_target	frac_pairs_off_target	frag_size_q20	frag_size_median	frag_size_q80	proper_pairs	frac_proper_pairs	pairs_on_target	pairs_off_target	reads_on_target	reads_off_target	frag_size_mean	frag_size_std	dupes	n_q20	n_q25	n_q30	n_bases	bed	saturation_at_1000000_reads	gc_0.0	gc_0.05	gc_0.1	gc_0.15	gc_0.2	gc_0.25	gc_0.3	gc_0.35	gc_0.4	gc_0.45	gc_0.5	gc_0.55	gc_0.6	gc_0.65	gc_0.7	gc_0.75	gc_0.8	gc_0.85	gc_0.9	gc_0.95	gc_1.0	min_depth	mean_depth	cv_depth	max_depth	q1_depth	q5_depth	q50_depth	q95_depth	q99_depth	lt100x	lt700x	n_bases_gt30x	n_bases_gt100x	frac_bases_gt30x	frac_bases_gt100x	roi_size	contam	n_sites	loglik	lrt	bed_base_count
3579467511_sv1	32038214	34862	0.001088	24188492	0.245011	12073588	0.761647	0.236912	0.876632	0.123368	212	323	483	11801779	0.977487	10345813	1455966	18423093	5730537	353.628193	127.096207	7849722	0.980834	0.949022	0.949022	4800502800	horizon_dec2024.widened_active_targets.low_depth_removed_050625.CDS_region_patch.bed	192212	0.090756	0.0	0.114538	0.1229	0.228156	0.372214	0.876093	1.217476	1.006258	0.907857	0.997588	0.993401	0.964442	1.10305	1.037606	0.915783	0.615092	0.302707	0.430972	0.0	0.0	0.0	256.290696	0.356318	956.0	58.0	92.0	253.0	439.0	502.0	0.064897	0.999475	6362746	5953301	1.00	0.935103	6366463	0.0066	592	-1344.1423	88.4937	6388832

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