work/3599836363_sv1_basic_stats.tsv - Workdir - call-prepare_allele_exp_inputs

Filename: work/3599836363_sv1_basic_stats.tsv
Full Path: s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/b2/b2370ffc5f508c9dfb9aeec2df0f3d78/work/3599836363_sv1_basic_stats.tsv
Size: 1.4 KB
Task: call-prepare_allele_exp_inputs
Attempt

name	reads	unmapped	frac_unmapped	unique_reads	frac_dupes	pairs	frac_reads_on_target	frac_reads_off_target	frac_pairs_on_target	frac_pairs_off_target	frag_size_q20	frag_size_median	frag_size_q80	proper_pairs	frac_proper_pairs	pairs_on_target	pairs_off_target	reads_on_target	reads_off_target	frag_size_mean	frag_size_std	dupes	n_q20	n_q25	n_q30	n_bases	bed	saturation_at_1000000_reads	gc_0.0	gc_0.05	gc_0.1	gc_0.15	gc_0.2	gc_0.25	gc_0.3	gc_0.35	gc_0.4	gc_0.45	gc_0.5	gc_0.55	gc_0.6	gc_0.65	gc_0.7	gc_0.75	gc_0.8	gc_0.85	gc_0.9	gc_0.95	gc_1.0	min_depth	mean_depth	cv_depth	max_depth	q1_depth	q5_depth	q50_depth	q95_depth	q99_depth	lt100x	lt700x	n_bases_gt30x	n_bases_gt100x	frac_bases_gt30x	frac_bases_gt100x	roi_size	contam	n_sites	loglik	lrt	bed_base_count
3599836363_sv1	29388192	48838	0.001662	23764809	0.191348	11852831	0.740068	0.257877	0.869337	0.130663	229	336	495	11433357	0.96461	9939446	1493911	17587563	6128408	367.180248	125.458969	5623383	0.975961	0.937479	0.937479	4400903100	horizon_dec2024.widened_active_targets.low_depth_removed_050625.CDS_region_patch.bed	177477	0.18597	0.0	0.156129	0.204292	0.281838	0.364633	0.83946	1.178212	1.014389	0.910695	1.015319	1.022588	0.977637	1.101704	1.026903	0.874426	0.598604	0.282114	0.407108	0.0	0.0	0.0	249.972645	0.323288	1077.0	67.0	96.0	251.0	415.0	471.0	0.056713	0.999661	6346354	6005402	1.00	0.943287	6366463	0.0115	683	-1928.7329	208.7149	6388832

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