work/3599837442_sv1_basic_stats.tsv - Workdir - call-prepare_allele_exp_inputs

Filename: work/3599837442_sv1_basic_stats.tsv
Full Path: s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/b2/b2370ffc5f508c9dfb9aeec2df0f3d78/work/3599837442_sv1_basic_stats.tsv
Size: 1.4 KB
Task: call-prepare_allele_exp_inputs
Attempt

name	reads	unmapped	frac_unmapped	unique_reads	frac_dupes	pairs	frac_reads_on_target	frac_reads_off_target	frac_pairs_on_target	frac_pairs_off_target	frag_size_q20	frag_size_median	frag_size_q80	proper_pairs	frac_proper_pairs	pairs_on_target	pairs_off_target	reads_on_target	reads_off_target	frag_size_mean	frag_size_std	dupes	n_q20	n_q25	n_q30	n_bases	bed	saturation_at_1000000_reads	gc_0.0	gc_0.05	gc_0.1	gc_0.15	gc_0.2	gc_0.25	gc_0.3	gc_0.35	gc_0.4	gc_0.45	gc_0.5	gc_0.55	gc_0.6	gc_0.65	gc_0.7	gc_0.75	gc_0.8	gc_0.85	gc_0.9	gc_0.95	gc_1.0	min_depth	mean_depth	cv_depth	max_depth	q1_depth	q5_depth	q50_depth	q95_depth	q99_depth	lt100x	lt700x	n_bases_gt30x	n_bases_gt100x	frac_bases_gt30x	frac_bases_gt100x	roi_size	contam	n_sites	loglik	lrt	bed_base_count
3599837442_sv1	32514820	59777	0.001838	25760177	0.20774	12844843	0.742237	0.255443	0.866686	0.133314	217	326	489	12393720	0.964879	10741460	1652260	19120151	6580249	357.937705	127.921486	6754643	0.975198	0.936042	0.936042	4868256450	horizon_dec2024.widened_active_targets.low_depth_removed_050625.CDS_region_patch.bed	195133	0.161704	0.0	0.151537	0.192764	0.265345	0.353364	0.815603	1.152316	0.995651	0.904934	1.017137	1.034563	1.005573	1.145732	1.065631	0.919633	0.615853	0.294498	0.305979	0.0	0.0	0.0	267.835859	0.321726	1252.0	73.0	105.0	267.0	451.0	517.0	0.040736	0.999074	6346303	6107121	1.00	0.959264	6366463	0.0095	630	-1631.645	153.9229	6388832

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