work/3599843893_sv1_basic_stats.tsv - Workdir - call-prepare_allele_exp_inputs

Filename: work/3599843893_sv1_basic_stats.tsv
Full Path: s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/b2/b2370ffc5f508c9dfb9aeec2df0f3d78/work/3599843893_sv1_basic_stats.tsv
Size: 1.4 KB
Task: call-prepare_allele_exp_inputs
Attempt

name	reads	unmapped	frac_unmapped	unique_reads	frac_dupes	pairs	frac_reads_on_target	frac_reads_off_target	frac_pairs_on_target	frac_pairs_off_target	frag_size_q20	frag_size_median	frag_size_q80	proper_pairs	frac_proper_pairs	pairs_on_target	pairs_off_target	reads_on_target	reads_off_target	frag_size_mean	frag_size_std	dupes	n_q20	n_q25	n_q30	n_bases	bed	saturation_at_1000000_reads	gc_0.0	gc_0.05	gc_0.1	gc_0.15	gc_0.2	gc_0.25	gc_0.3	gc_0.35	gc_0.4	gc_0.45	gc_0.5	gc_0.55	gc_0.6	gc_0.65	gc_0.7	gc_0.75	gc_0.8	gc_0.85	gc_0.9	gc_0.95	gc_1.0	min_depth	mean_depth	cv_depth	max_depth	q1_depth	q5_depth	q50_depth	q95_depth	q99_depth	lt100x	lt700x	n_bases_gt30x	n_bases_gt100x	frac_bases_gt30x	frac_bases_gt100x	roi_size	contam	n_sites	loglik	lrt	bed_base_count
3599843893_sv1	34488528	49734	0.001442	28228861	0.1815	14085378	0.765829	0.23241	0.877818	0.122182	218	314	459	13755035	0.976547	12074415	1680620	21618471	6560656	343.505418	114.996841	6259667	0.979645	0.946332	0.946332	5165819100	horizon_dec2024.widened_active_targets.low_depth_removed_050625.CDS_region_patch.bed	211059	0.163281	0.0	0.170558	0.208238	0.25869	0.370654	0.867491	1.209658	1.02499	0.909644	1.001402	0.988167	0.949469	1.095855	1.035743	0.942316	0.627348	0.311228	0.3584	0.0	0.0	0.0	306.011608	0.313998	1355.0	86.0	122.0	310.0	498.0	564.0	0.01988	0.998774	6345966	6239897	1.00	0.98012	6366463	0.007	636	-1626.8956	103.5351	6388832

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