work/3599843902_sv1_basic_stats.tsv - Workdir - call-prepare_allele_exp_inputs

Filename: work/3599843902_sv1_basic_stats.tsv
Full Path: s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/b2/b2370ffc5f508c9dfb9aeec2df0f3d78/work/3599843902_sv1_basic_stats.tsv
Size: 1.4 KB
Task: call-prepare_allele_exp_inputs
Attempt

name	reads	unmapped	frac_unmapped	unique_reads	frac_dupes	pairs	frac_reads_on_target	frac_reads_off_target	frac_pairs_on_target	frac_pairs_off_target	frag_size_q20	frag_size_median	frag_size_q80	proper_pairs	frac_proper_pairs	pairs_on_target	pairs_off_target	reads_on_target	reads_off_target	frag_size_mean	frag_size_std	dupes	n_q20	n_q25	n_q30	n_bases	bed	saturation_at_1000000_reads	gc_0.0	gc_0.05	gc_0.1	gc_0.15	gc_0.2	gc_0.25	gc_0.3	gc_0.35	gc_0.4	gc_0.45	gc_0.5	gc_0.55	gc_0.6	gc_0.65	gc_0.7	gc_0.75	gc_0.8	gc_0.85	gc_0.9	gc_0.95	gc_1.0	min_depth	mean_depth	cv_depth	max_depth	q1_depth	q5_depth	q50_depth	q95_depth	q99_depth	lt100x	lt700x	n_bases_gt30x	n_bases_gt100x	frac_bases_gt30x	frac_bases_gt100x	roi_size	contam	n_sites	loglik	lrt	bed_base_count
3599843902_sv1	30722232	43868	0.001428	24790672	0.193071	12369080	0.756418	0.241813	0.876778	0.123222	233	328	471	12035402	0.973023	10552375	1483027	18752099	5994705	356.764867	114.147141	5931560	0.978844	0.944392	0.944392	4601754600	horizon_dec2024.widened_active_targets.low_depth_removed_050625.CDS_region_patch.bed	184636	0.164562	0.0	0.170714	0.21074	0.262047	0.365749	0.864924	1.208478	1.025038	0.909355	1.003412	0.992485	0.95302	1.094973	1.031269	0.905633	0.607905	0.292653	0.377314	0.0	0.0	0.0	269.311156	0.323369	1480.0	72.0	103.0	272.0	444.0	503.0	0.043507	0.999121	6346182	6089480	1.00	0.956493	6366463	0.0065	693	-1511.8221	89.7061	6388832

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