work/3599843941_sv1_basic_stats.tsv - Workdir - call-prepare_allele_exp_inputs

Filename: work/3599843941_sv1_basic_stats.tsv
Full Path: s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/b2/b2370ffc5f508c9dfb9aeec2df0f3d78/work/3599843941_sv1_basic_stats.tsv
Size: 1.4 KB
Task: call-prepare_allele_exp_inputs
Attempt

name	reads	unmapped	frac_unmapped	unique_reads	frac_dupes	pairs	frac_reads_on_target	frac_reads_off_target	frac_pairs_on_target	frac_pairs_off_target	frag_size_q20	frag_size_median	frag_size_q80	proper_pairs	frac_proper_pairs	pairs_on_target	pairs_off_target	reads_on_target	reads_off_target	frag_size_mean	frag_size_std	dupes	n_q20	n_q25	n_q30	n_bases	bed	saturation_at_1000000_reads	gc_0.0	gc_0.05	gc_0.1	gc_0.15	gc_0.2	gc_0.25	gc_0.3	gc_0.35	gc_0.4	gc_0.45	gc_0.5	gc_0.55	gc_0.6	gc_0.65	gc_0.7	gc_0.75	gc_0.8	gc_0.85	gc_0.9	gc_0.95	gc_1.0	min_depth	mean_depth	cv_depth	max_depth	q1_depth	q5_depth	q50_depth	q95_depth	q99_depth	lt100x	lt700x	n_bases_gt30x	n_bases_gt100x	frac_bases_gt30x	frac_bases_gt100x	roi_size	contam	n_sites	loglik	lrt	bed_base_count
3599843941_sv1	30876468	51622	0.001672	24103328	0.219363	12021201	0.75	0.247858	0.879425	0.120575	238	339	490	11649407	0.969072	10244784	1404623	18077501	5974205	368.763798	119.531647	6773140	0.976693	0.938904	0.938904	4623726900	horizon_dec2024.widened_active_targets.low_depth_removed_050625.CDS_region_patch.bed	177749	0.19695	0.0	0.202963	0.24132	0.292668	0.38648	0.884235	1.218164	1.023911	0.903594	0.993614	0.989913	0.953551	1.088692	1.030056	0.900009	0.612769	0.302548	0.32875	0.0	0.0	0.0	258.714711	0.322985	1049.0	70.0	99.0	262.0	424.0	483.0	0.050466	0.999261	6346516	6045176	1.00	0.949534	6366463	0.0072	637	-1440.2854	102.7156	6388832

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