work/3599843965_sv1_basic_stats.tsv - Workdir - call-prepare_allele_exp_inputs

Filename: work/3599843965_sv1_basic_stats.tsv
Full Path: s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/b2/b2370ffc5f508c9dfb9aeec2df0f3d78/work/3599843965_sv1_basic_stats.tsv
Size: 1.4 KB
Task: call-prepare_allele_exp_inputs
Attempt

name	reads	unmapped	frac_unmapped	unique_reads	frac_dupes	pairs	frac_reads_on_target	frac_reads_off_target	frac_pairs_on_target	frac_pairs_off_target	frag_size_q20	frag_size_median	frag_size_q80	proper_pairs	frac_proper_pairs	pairs_on_target	pairs_off_target	reads_on_target	reads_off_target	frag_size_mean	frag_size_std	dupes	n_q20	n_q25	n_q30	n_bases	bed	saturation_at_1000000_reads	gc_0.0	gc_0.05	gc_0.1	gc_0.15	gc_0.2	gc_0.25	gc_0.3	gc_0.35	gc_0.4	gc_0.45	gc_0.5	gc_0.55	gc_0.6	gc_0.65	gc_0.7	gc_0.75	gc_0.8	gc_0.85	gc_0.9	gc_0.95	gc_1.0	min_depth	mean_depth	cv_depth	max_depth	q1_depth	q5_depth	q50_depth	q95_depth	q99_depth	lt100x	lt700x	n_bases_gt30x	n_bases_gt100x	frac_bases_gt30x	frac_bases_gt100x	roi_size	contam	n_sites	loglik	lrt	bed_base_count
3599843965_sv1	29330828	46800	0.001596	22626032	0.228592	11285186	0.756354	0.241577	0.878088	0.121912	228	327	474	10964809	0.971611	9628071	1336738	17113301	5465931	355.869558	116.645096	6704796	0.977224	0.940876	0.940876	4392604200	horizon_dec2024.widened_active_targets.low_depth_removed_050625.CDS_region_patch.bed	177905	0.099804	0.0	0.113076	0.153055	0.245282	0.367849	0.857919	1.186611	0.999944	0.909295	1.007803	1.0144	0.980751	1.11357	1.049984	0.906892	0.62259	0.307755	0.441687	0.0	0.0	0.0	243.55952	0.356613	1300.0	54.0	87.0	241.0	417.0	475.0	0.076565	0.999536	6362585	5879017	1.00	0.923435	6366463	0.0098	657	-1776.0012	161.8696	6388832

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