work/3599843980_sv1_basic_stats.tsv - Workdir - call-prepare_allele_exp_inputs

Filename: work/3599843980_sv1_basic_stats.tsv
Full Path: s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/b2/b2370ffc5f508c9dfb9aeec2df0f3d78/work/3599843980_sv1_basic_stats.tsv
Size: 1.4 KB
Task: call-prepare_allele_exp_inputs
Attempt

name	reads	unmapped	frac_unmapped	unique_reads	frac_dupes	pairs	frac_reads_on_target	frac_reads_off_target	frac_pairs_on_target	frac_pairs_off_target	frag_size_q20	frag_size_median	frag_size_q80	proper_pairs	frac_proper_pairs	pairs_on_target	pairs_off_target	reads_on_target	reads_off_target	frag_size_mean	frag_size_std	dupes	n_q20	n_q25	n_q30	n_bases	bed	saturation_at_1000000_reads	gc_0.0	gc_0.05	gc_0.1	gc_0.15	gc_0.2	gc_0.25	gc_0.3	gc_0.35	gc_0.4	gc_0.45	gc_0.5	gc_0.55	gc_0.6	gc_0.65	gc_0.7	gc_0.75	gc_0.8	gc_0.85	gc_0.9	gc_0.95	gc_1.0	min_depth	mean_depth	cv_depth	max_depth	q1_depth	q5_depth	q50_depth	q95_depth	q99_depth	lt100x	lt700x	n_bases_gt30x	n_bases_gt100x	frac_bases_gt30x	frac_bases_gt100x	roi_size	contam	n_sites	loglik	lrt	bed_base_count
3599843980_sv1	37345626	60511	0.00162	28707635	0.231299	14318672	0.757608	0.240284	0.874017	0.125983	212	317	472	13910991	0.971528	12158448	1752543	21749127	6897997	347.871694	122.364227	8637991	0.977194	0.940957	0.940957	5592767250	horizon_dec2024.widened_active_targets.low_depth_removed_050625.CDS_region_patch.bed	211574	0.20206	0.0	0.166353	0.232532	0.278168	0.383726	0.890079	1.22034	1.029559	0.902815	0.990811	0.983685	0.946771	1.09256	1.027087	0.915476	0.603465	0.290697	0.329345	0.0	0.0	0.0	304.749113	0.312401	1635.0	86.0	123.0	308.0	496.0	566.0	0.019269	0.998712	6346313	6243785	1.00	0.980731	6366463	0.006	622	-1577.2014	82.575	6388832

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