work/3599843982_sv1_basic_stats.tsv - Workdir - call-prepare_allele_exp_inputs

Filename: work/3599843982_sv1_basic_stats.tsv
Full Path: s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/b2/b2370ffc5f508c9dfb9aeec2df0f3d78/work/3599843982_sv1_basic_stats.tsv
Size: 1.4 KB
Task: call-prepare_allele_exp_inputs
Attempt

name	reads	unmapped	frac_unmapped	unique_reads	frac_dupes	pairs	frac_reads_on_target	frac_reads_off_target	frac_pairs_on_target	frac_pairs_off_target	frag_size_q20	frag_size_median	frag_size_q80	proper_pairs	frac_proper_pairs	pairs_on_target	pairs_off_target	reads_on_target	reads_off_target	frag_size_mean	frag_size_std	dupes	n_q20	n_q25	n_q30	n_bases	bed	saturation_at_1000000_reads	gc_0.0	gc_0.05	gc_0.1	gc_0.15	gc_0.2	gc_0.25	gc_0.3	gc_0.35	gc_0.4	gc_0.45	gc_0.5	gc_0.55	gc_0.6	gc_0.65	gc_0.7	gc_0.75	gc_0.8	gc_0.85	gc_0.9	gc_0.95	gc_1.0	min_depth	mean_depth	cv_depth	max_depth	q1_depth	q5_depth	q50_depth	q95_depth	q99_depth	lt100x	lt700x	n_bases_gt30x	n_bases_gt100x	frac_bases_gt30x	frac_bases_gt100x	roi_size	contam	n_sites	loglik	lrt	bed_base_count
3599843982_sv1	32707820	56760	0.001735	25922738	0.207445	12927825	0.760101	0.237709	0.878026	0.121974	216	321	477	12602533	0.974838	11065357	1537176	19703898	6162080	352.110988	123.734512	6785082	0.977741	0.941817	0.941817	4897659000	horizon_dec2024.widened_active_targets.low_depth_removed_050625.CDS_region_patch.bed	192647	0.166253	0.0	0.155234	0.215381	0.265111	0.382844	0.87546	1.216364	1.02684	0.905655	0.996361	0.984252	0.947254	1.098902	1.032506	0.926172	0.617662	0.301022	0.390959	0.0	0.0	0.0	276.856362	0.314067	1372.0	78.0	111.0	280.0	452.0	517.0	0.030934	0.99906	6346025	6169523	1.00	0.969066	6366463	0.0089	681	-1843.9516	156.2775	6388832

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