work/3599846385_sv1_basic_stats.tsv - Workdir - call-prepare_allele_exp_inputs

Filename: work/3599846385_sv1_basic_stats.tsv
Full Path: s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/b2/b2370ffc5f508c9dfb9aeec2df0f3d78/work/3599846385_sv1_basic_stats.tsv
Size: 1.4 KB
Task: call-prepare_allele_exp_inputs
Attempt

name	reads	unmapped	frac_unmapped	unique_reads	frac_dupes	pairs	frac_reads_on_target	frac_reads_off_target	frac_pairs_on_target	frac_pairs_off_target	frag_size_q20	frag_size_median	frag_size_q80	proper_pairs	frac_proper_pairs	pairs_on_target	pairs_off_target	reads_on_target	reads_off_target	frag_size_mean	frag_size_std	dupes	n_q20	n_q25	n_q30	n_bases	bed	saturation_at_1000000_reads	gc_0.0	gc_0.05	gc_0.1	gc_0.15	gc_0.2	gc_0.25	gc_0.3	gc_0.35	gc_0.4	gc_0.45	gc_0.5	gc_0.55	gc_0.6	gc_0.65	gc_0.7	gc_0.75	gc_0.8	gc_0.85	gc_0.9	gc_0.95	gc_1.0	min_depth	mean_depth	cv_depth	max_depth	q1_depth	q5_depth	q50_depth	q95_depth	q99_depth	lt100x	lt700x	n_bases_gt30x	n_bases_gt100x	frac_bases_gt30x	frac_bases_gt100x	roi_size	contam	n_sites	loglik	lrt	bed_base_count
3599846385_sv1	38333562	61818	0.001613	30371389	0.207708	15149948	0.766909	0.231056	0.873234	0.126766	205	303	450	14791139	0.976316	12916130	1875009	23292087	7017484	332.90208	116.518478	7962173	0.978158	0.943615	0.943615	5740761600	horizon_dec2024.widened_active_targets.low_depth_removed_050625.CDS_region_patch.bed	224224	0.190471	0.0	0.156955	0.221095	0.263799	0.374564	0.872255	1.214626	1.028182	0.906482	0.995506	0.979236	0.94745	1.100744	1.044655	0.953251	0.637848	0.326171	0.362957	0.0	0.0	0.0	323.99587	0.30781	1543.0	94.0	134.0	327.0	523.0	595.0	0.012643	0.997829	6346177	6285970	1.00	0.987357	6366463	0.0073	704	-1833.9459	126.5749	6388832

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