work/3599846480_sv1_basic_stats.tsv - Workdir - call-prepare_allele_exp_inputs

Filename: work/3599846480_sv1_basic_stats.tsv
Full Path: s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/b2/b2370ffc5f508c9dfb9aeec2df0f3d78/work/3599846480_sv1_basic_stats.tsv
Size: 1.4 KB
Task: call-prepare_allele_exp_inputs
Attempt

name	reads	unmapped	frac_unmapped	unique_reads	frac_dupes	pairs	frac_reads_on_target	frac_reads_off_target	frac_pairs_on_target	frac_pairs_off_target	frag_size_q20	frag_size_median	frag_size_q80	proper_pairs	frac_proper_pairs	pairs_on_target	pairs_off_target	reads_on_target	reads_off_target	frag_size_mean	frag_size_std	dupes	n_q20	n_q25	n_q30	n_bases	bed	saturation_at_1000000_reads	gc_0.0	gc_0.05	gc_0.1	gc_0.15	gc_0.2	gc_0.25	gc_0.3	gc_0.35	gc_0.4	gc_0.45	gc_0.5	gc_0.55	gc_0.6	gc_0.65	gc_0.7	gc_0.75	gc_0.8	gc_0.85	gc_0.9	gc_0.95	gc_1.0	min_depth	mean_depth	cv_depth	max_depth	q1_depth	q5_depth	q50_depth	q95_depth	q99_depth	lt100x	lt700x	n_bases_gt30x	n_bases_gt100x	frac_bases_gt30x	frac_bases_gt100x	roi_size	contam	n_sites	loglik	lrt	bed_base_count
3599846480_sv1	40482176	70919	0.001752	32177146	0.205153	16047661	0.752814	0.244982	0.86647	0.13353	209	314	469	15613889	0.97297	13528961	2084928	24223410	7882817	344.791501	123.207832	8305030	0.97701	0.940706	0.940706	6061688550	horizon_dec2024.widened_active_targets.low_depth_removed_050625.CDS_region_patch.bed	239943	0.146566	0.0	0.142657	0.192174	0.260397	0.367213	0.864424	1.199306	1.019611	0.90831	1.002082	0.9972	0.96184	1.104299	1.036117	0.926067	0.619323	0.306979	0.379899	0.0	0.0	0.0	337.718342	0.310824	1878.0	96.0	137.0	341.0	552.0	627.0	0.01177	0.99743	6346833	6291530	1.00	0.98823	6366463	0.0068	590	-1659.4479	109.2335	6388832

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