work/3599846523_sv1_basic_stats.tsv - Workdir - call-prepare_allele_exp_inputs

Filename: work/3599846523_sv1_basic_stats.tsv
Full Path: s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/b2/b2370ffc5f508c9dfb9aeec2df0f3d78/work/3599846523_sv1_basic_stats.tsv
Size: 1.4 KB
Task: call-prepare_allele_exp_inputs
Attempt

name	reads	unmapped	frac_unmapped	unique_reads	frac_dupes	pairs	frac_reads_on_target	frac_reads_off_target	frac_pairs_on_target	frac_pairs_off_target	frag_size_q20	frag_size_median	frag_size_q80	proper_pairs	frac_proper_pairs	pairs_on_target	pairs_off_target	reads_on_target	reads_off_target	frag_size_mean	frag_size_std	dupes	n_q20	n_q25	n_q30	n_bases	bed	saturation_at_1000000_reads	gc_0.0	gc_0.05	gc_0.1	gc_0.15	gc_0.2	gc_0.25	gc_0.3	gc_0.35	gc_0.4	gc_0.45	gc_0.5	gc_0.55	gc_0.6	gc_0.65	gc_0.7	gc_0.75	gc_0.8	gc_0.85	gc_0.9	gc_0.95	gc_1.0	min_depth	mean_depth	cv_depth	max_depth	q1_depth	q5_depth	q50_depth	q95_depth	q99_depth	lt100x	lt700x	n_bases_gt30x	n_bases_gt100x	frac_bases_gt30x	frac_bases_gt100x	roi_size	contam	n_sites	loglik	lrt	bed_base_count
3599846523_sv1	39075234	62796	0.001607	31613355	0.190962	15770184	0.761016	0.236998	0.866031	0.133969	196	299	453	15390825	0.975945	13328929	2061896	24058269	7492290	330.444662	121.732132	7461879	0.97731	0.941801	0.941801	5851865700	horizon_dec2024.widened_active_targets.low_depth_removed_050625.CDS_region_patch.bed	234089	0.168546	0.0	0.144756	0.21166	0.257948	0.36409	0.853587	1.193287	1.017794	0.910999	1.008391	0.998277	0.962693	1.106662	1.041498	0.93752	0.631524	0.307023	0.382253	0.0	0.0	0.0	329.643588	0.305079	1976.0	96.0	138.0	332.0	533.0	605.0	0.011787	0.997634	6345039	6291419	1.00	0.988213	6366463	0.009	715	-2382.8965	211.3037	6388832

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