work/3599846532_sv1_basic_stats.tsv - Workdir - call-prepare_allele_exp_inputs

Filename: work/3599846532_sv1_basic_stats.tsv
Full Path: s3://natera-rnd-pltf-dev-miniwdl-scratch-01/work/b2/b2370ffc5f508c9dfb9aeec2df0f3d78/work/3599846532_sv1_basic_stats.tsv
Size: 1.4 KB
Task: call-prepare_allele_exp_inputs
Attempt

name	reads	unmapped	frac_unmapped	unique_reads	frac_dupes	pairs	frac_reads_on_target	frac_reads_off_target	frac_pairs_on_target	frac_pairs_off_target	frag_size_q20	frag_size_median	frag_size_q80	proper_pairs	frac_proper_pairs	pairs_on_target	pairs_off_target	reads_on_target	reads_off_target	frag_size_mean	frag_size_std	dupes	n_q20	n_q25	n_q30	n_bases	bed	saturation_at_1000000_reads	gc_0.0	gc_0.05	gc_0.1	gc_0.15	gc_0.2	gc_0.25	gc_0.3	gc_0.35	gc_0.4	gc_0.45	gc_0.5	gc_0.55	gc_0.6	gc_0.65	gc_0.7	gc_0.75	gc_0.8	gc_0.85	gc_0.9	gc_0.95	gc_1.0	min_depth	mean_depth	cv_depth	max_depth	q1_depth	q5_depth	q50_depth	q95_depth	q99_depth	lt100x	lt700x	n_bases_gt30x	n_bases_gt100x	frac_bases_gt30x	frac_bases_gt100x	roi_size	contam	n_sites	loglik	lrt	bed_base_count
3599846532_sv1	30712332	49961	0.001627	24478814	0.202965	12209302	0.739809	0.25815	0.864099	0.135901	231	333	486	11838928	0.969665	10230001	1608927	18109638	6319215	363.322624	120.593498	6233518	0.976292	0.93838	0.93838	4599355650	horizon_dec2024.widened_active_targets.low_depth_removed_050625.CDS_region_patch.bed	193688	0.105358	0.0	0.10947	0.135681	0.242906	0.361372	0.840567	1.178611	0.994573	0.914454	1.018627	1.024873	0.991421	1.105001	1.041742	0.884431	0.605298	0.307925	0.370039	0.0	0.0	0.0	258.72642	0.360123	1425.0	57.0	91.0	255.0	448.0	509.0	0.066724	0.999319	6364223	5941666	1.00	0.933276	6366463	0.0093	597	-1598.6834	153.4874	6388832

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