cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i 1029_F0L-N1-BDNA-1_B23KGCJLT4_1.md.bam --algo AlignmentStat 1029_F0L-N1-BDNA-1_B23KGCJLT4_1.sentieon.alignment_summary_metrics --algo InsertSizeMetricAlgo 1029_F0L-N1-BDNA-1_B23KGCJLT4_1.sentieon.insert_size_metrics --algo QualDistribution 1029_F0L-N1-BDNA-1_B23KGCJLT4_1.sentieon.quality_distribution_metrics --algo BaseDistributionByCycle 1029_F0L-N1-BDNA-1_B23KGCJLT4_1.sentieon.base_distribution_by_cycle_metrics --algo MeanQualityByCycle 1029_F0L-N1-BDNA-1_B23KGCJLT4_1.sentieon.quality_by_cycle_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:188000001, elapsed 4.3s, est remaining 81.6s, peak mem 1156MB, user 101.8s, sys 2.7s, output queue size 146
progress 10% @chr2:17000001, elapsed 7.6s, est remaining 68.8s, peak mem 1652MB, user 208.8s, sys 4.0s, output queue size 117
progress 15% @chr3:16000001, elapsed 11.6s, est remaining 65.9s, peak mem 2905MB, user 322.3s, sys 4.5s, output queue size 203
progress 20% @chr3:155000001, elapsed 15.2s, est remaining 60.8s, peak mem 2961MB, user 424.6s, sys 5.0s, output queue size 364
progress 25% @chr4:133000001, elapsed 18.4s, est remaining 55.3s, peak mem 3022MB, user 537.5s, sys 6.9s, output queue size 302
progress 30% @chr5:97000001, elapsed 20.9s, est remaining 48.9s, peak mem 3050MB, user 608.5s, sys 7.2s, output queue size 464
progress 35% @chr6:79000001, elapsed 24.4s, est remaining 45.3s, peak mem 3095MB, user 707.7s, sys 7.8s, output queue size 625
progress 40% @chr7:64000001, elapsed 28.3s, est remaining 42.5s, peak mem 3194MB, user 808.3s, sys 8.1s, output queue size 786
progress 45% @chr8:70000001, elapsed 32.8s, est remaining 40.1s, peak mem 3261MB, user 967.6s, sys 8.8s, output queue size 261
progress 50% @chr9:88000001, elapsed 36.1s, est remaining 36.1s, peak mem 3310MB, user 1055.4s, sys 9.2s, output queue size 366
progress 55% @chr10:118000001, elapsed 40.3s, est remaining 33.0s, peak mem 3350MB, user 1181.9s, sys 9.8s, output queue size 527
progress 60% @chr11:130000001, elapsed 44.5s, est remaining 29.7s, peak mem 3350MB, user 1309.6s, sys 10.2s, output queue size 689
progress 65% @chr12:102000001, elapsed 48.3s, est remaining 26.0s, peak mem 3350MB, user 1432.0s, sys 10.5s, output queue size 672
progress 70% @chr14:71000001, elapsed 50.3s, est remaining 21.6s, peak mem 3350MB, user 1498.4s, sys 10.7s, output queue size 833
progress 75% @chr16:42000001, elapsed 54.1s, est remaining 18.0s, peak mem 3403MB, user 1601.0s, sys 11.1s, output queue size 995
progress 80% @chr16:2000001, elapsed 59.4s, est remaining 14.9s, peak mem 3419MB, user 1767.6s, sys 11.6s, output queue size 623
progress 85% @chr19:47000001, elapsed 63.9s, est remaining 11.3s, peak mem 3419MB, user 1932.0s, sys 12.2s, output queue size 351
progress 90% @chrX:32000001, elapsed 66.7s, est remaining 7.4s, peak mem 3454MB, user 2018.4s, sys 12.6s, output queue size 513
progress 95% @chrY:54000001, elapsed 68.8s, est remaining 3.6s, peak mem 3462MB, user 2072.4s, sys 13.0s, output queue size 675
progress 100% @chrX:67000001, elapsed 75.1s, est remaining 0.0s, peak mem 3517MB, user 2162.8s, sys 13.5s, output queue size 3540
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.83
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: 1f8bfbff fffab20b
  extended: f1bf27eb 1b407f7e
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 192
algo: AlignmentStat InsertSizeMetricAlgo QualDistribution BaseDistributionByCycle MeanQualityByCycle
license: sentieon:Metrics=31
input file size: 20487237904
reads: 409336898
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 426.594 user 9.393 sys 435.911 real
done: 1 calls 0.020 user 0.010 sys 0.032 real
exec_no_coor: 1 calls 0.002 user 0.000 sys 0.008 real
execute: 1 calls 0.002 user 0.002 sys 75.163 real
idle: 207 calls 0.164 user 0.004 sys 180.011 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 3687997440 mem 2164.938 user 13.737 sys 76.257 real