Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/95/94ef07bdb84b6f772c7d3683b3fd86/1029_BTOJ-N1-BDNA-1_B23KGCJLT4_1.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/26/bae8a5e5e24749d96fa2b2407b3653/1029_BTOJ-N1-BDNA-1_B23KGCJLT4_1.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ca/e096d4067cbe60ba5323e6d05bc290/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0e/26d464a8be50b1d1224b887c074012/1029_BTOJ-N1-BDNA-1_B23KGCJLT4_1.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/01/70041dcda245b25ae99ddc54a15ac2/1029_BTOJ-N1-BDNA-1_B23KGCJLT4_1.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/69/9db6aa0ba0ca973ad19d7ff8d9ddf4/1029_BTOJ-N1-BDNA-1_B23KGCJLT4_1.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c6/62edc15de3b64bd86bec847895dc0b/1029_BTOJ-N1-BDNA-1_B23KGCJLT4_1.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/34/083d799ba77f555b783349ab083dc6/1029_BTOJ-N1-BDNA-1_B23KGCJLT4_1.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ca/e096d4067cbe60ba5323e6d05bc290/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2c/c437cb5d8ed1f0c70155739c4db02a/1029_BTOJ-N1-BDNA-1_B23KGCJLT4_1.bam
==> STAGING COMPLETE (12 inputs)

ls: cannot access '*.cram': No such file or directory
ls: cannot access '*.crai': No such file or directory