cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i 1029_1BK-N1-BDNA-1_B23KGCJLT4_1.md.bam --algo AlignmentStat 1029_1BK-N1-BDNA-1_B23KGCJLT4_1.sentieon.alignment_summary_metrics --algo InsertSizeMetricAlgo 1029_1BK-N1-BDNA-1_B23KGCJLT4_1.sentieon.insert_size_metrics --algo QualDistribution 1029_1BK-N1-BDNA-1_B23KGCJLT4_1.sentieon.quality_distribution_metrics --algo BaseDistributionByCycle 1029_1BK-N1-BDNA-1_B23KGCJLT4_1.sentieon.base_distribution_by_cycle_metrics --algo MeanQualityByCycle 1029_1BK-N1-BDNA-1_B23KGCJLT4_1.sentieon.quality_by_cycle_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:177000001, elapsed 3.7s, est remaining 70.5s, peak mem 1067MB, user 90.1s, sys 1.0s, output queue size 146
progress 10% @chr2:94000001, elapsed 6.9s, est remaining 62.2s, peak mem 1512MB, user 186.2s, sys 1.8s, output queue size 166
progress 15% @chr2:197000001, elapsed 10.5s, est remaining 59.5s, peak mem 2152MB, user 291.4s, sys 4.1s, output queue size 203
progress 20% @chr3:158000001, elapsed 13.2s, est remaining 52.7s, peak mem 2212MB, user 376.2s, sys 6.7s, output queue size 283
progress 25% @chr4:134000001, elapsed 15.1s, est remaining 45.4s, peak mem 2212MB, user 444.3s, sys 7.5s, output queue size 302
progress 30% @chr5:107000001, elapsed 16.6s, est remaining 38.7s, peak mem 2251MB, user 487.1s, sys 7.9s, output queue size 464
progress 35% @chr6:86000001, elapsed 18.7s, est remaining 34.7s, peak mem 2263MB, user 543.1s, sys 8.3s, output queue size 625
progress 40% @chr7:66000001, elapsed 21.1s, est remaining 31.6s, peak mem 2387MB, user 609.8s, sys 8.8s, output queue size 786
progress 45% @chr8:82000001, elapsed 23.8s, est remaining 29.1s, peak mem 2427MB, user 690.3s, sys 9.1s, output queue size 948
progress 50% @chr9:81000001, elapsed 26.1s, est remaining 26.1s, peak mem 2455MB, user 761.4s, sys 10.0s, output queue size 366
progress 55% @chr10:103000001, elapsed 29.0s, est remaining 23.7s, peak mem 2497MB, user 845.6s, sys 10.6s, output queue size 527
progress 60% @chr12:3000001, elapsed 32.0s, est remaining 21.3s, peak mem 2497MB, user 935.1s, sys 11.9s, output queue size 689
progress 65% @chr13:36000001, elapsed 35.0s, est remaining 18.9s, peak mem 2497MB, user 1024.8s, sys 13.0s, output queue size 672
progress 70% @chr14:60000001, elapsed 36.7s, est remaining 15.7s, peak mem 2497MB, user 1074.9s, sys 13.4s, output queue size 833
progress 75% @chr16:42000001, elapsed 40.1s, est remaining 13.4s, peak mem 2544MB, user 1174.7s, sys 14.2s, output queue size 995
progress 80% @chr18:25000001, elapsed 44.9s, est remaining 11.2s, peak mem 2573MB, user 1321.1s, sys 15.8s, output queue size 623
progress 85% @chr20:43000001, elapsed 49.3s, est remaining 8.7s, peak mem 2576MB, user 1463.9s, sys 16.6s, output queue size 351
progress 90% @chrX:43000001, elapsed 52.0s, est remaining 5.8s, peak mem 2656MB, user 1553.3s, sys 17.4s, output queue size 513
progress 95% @chrY:54000001, elapsed 54.0s, est remaining 2.8s, peak mem 2659MB, user 1606.8s, sys 18.0s, output queue size 675
progress 100% @chrX:67000001, elapsed 60.4s, est remaining 0.0s, peak mem 2659MB, user 1700.6s, sys 18.8s, output queue size 3540
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.83
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: 1f8bfbff fffab20b
  extended: f1bf27eb 1b407f7e
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 192
algo: AlignmentStat InsertSizeMetricAlgo QualDistribution BaseDistributionByCycle MeanQualityByCycle
license: sentieon:Metrics=31
input file size: 18012890574
reads: 362675322
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 321.893 user 8.578 sys 329.434 real
done: 1 calls 0.005 user 0.004 sys 0.016 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.005 real
execute: 1 calls 0.000 user 0.003 sys 60.512 real
idle: 219 calls 0.146 user 0.001 sys 185.216 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 2789007360 mem 1702.316 user 19.189 sys 61.677 real