[2026-05-27T04:54:31.282843Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Initiating pyFlow run
[2026-05-27T04:54:31.284347Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-05-27T04:54:31.284377Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-05-27T04:54:31.284384Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-05-27T04:54:31.284389Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXAji0Jt'
[2026-05-27T04:54:31.284394Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-05-27T04:54:31.284399Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] [RunParameters] mode: local
[2026-05-27T04:54:31.284404Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-05-27T04:54:31.284408Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] [RunParameters] memMb: 1523736
[2026-05-27T04:54:31.284412Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-05-27T04:54:31.284416Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-05-27T04:54:31.284419Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-05-27T04:54:31.284423Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-05-27T04:54:31.284427Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-05-27T04:54:31.284958Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-05-27T04:54:31.285084Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-05-27T04:54:31.290994Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-05-27T04:54:31.291593Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-05-27T04:54:31.291734Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-05-27T04:54:31.291906Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-05-27T04:54:31.292200Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.293087Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.293179Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.293265Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.293537Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.293838Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.293956Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-05-27T04:54:31.294349Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.294860Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.295311Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.295459Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.296736Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.297170Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.297688Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-05-27T04:54:31.297936Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.298122Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.298342Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.298612Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.298886Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.298952Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.299134Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0000' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.299198Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0000' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.299342Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0001' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.299438Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0001' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.299552Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0002' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.299615Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0002' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.299729Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0003' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.299795Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0003' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.299986Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0004' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.300101Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0004' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.300565Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0005' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.300932Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0005' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.301055Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0006' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.301118Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0006' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.301231Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0000' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.301294Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0000' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.301404Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0001' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.301469Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0001' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.301590Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0002' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.301652Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0002' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.301763Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0003' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.301825Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0003' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.302076Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0004' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.302380Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0004' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.302488Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0005' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.302552Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0005' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.302667Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0006' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.302784Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0006' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.302894Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0000' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.302958Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0000' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.303064Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0001' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.303127Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0001' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.303235Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0002' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.303296Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0002' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.303519Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0003' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.303906Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0003' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.316989Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0004' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.317099Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0004' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.317170Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.317329Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.317397Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.317482Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.317552Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.317656Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.317724Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-05-27T04:54:31.317774Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-05-27T04:54:31.326928Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:31.327481Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0006' from sub-workflow 'CallGenome'
[2026-05-27T04:54:31.327834Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0000' from sub-workflow 'CallGenome'
[2026-05-27T04:54:31.328460Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-05-27T04:54:31.329046Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-05-27T04:54:31.329652Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0006' from sub-workflow 'CallGenome'
[2026-05-27T04:54:31.330208Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0003' from sub-workflow 'CallGenome'
[2026-05-27T04:54:31.332351Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0001' from sub-workflow 'CallGenome'
[2026-05-27T04:54:31.333109Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-05-27T04:54:31.338543Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0000] Task initiated on local node
[2026-05-27T04:54:31.342608Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0002] Task initiated on local node
[2026-05-27T04:54:31.345757Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0006] Task initiated on local node
[2026-05-27T04:54:31.348097Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0001] Task initiated on local node
[2026-05-27T04:54:31.350361Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0001] Task initiated on local node
[2026-05-27T04:54:31.350604Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0003] Task initiated on local node
[2026-05-27T04:54:31.352652Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0006] Task initiated on local node
[2026-05-27T04:54:31.450107Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:31.451020Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0000' from sub-workflow 'CallGenome'
[2026-05-27T04:54:31.454340Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0000] Task initiated on local node
[2026-05-27T04:54:32.719867Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:32.720824Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0001' from sub-workflow 'CallGenome'
[2026-05-27T04:54:32.724563Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0001] Task initiated on local node
[2026-05-27T04:54:32.785735Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:32.786633Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0002' from sub-workflow 'CallGenome'
[2026-05-27T04:54:32.790559Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0002] Task initiated on local node
[2026-05-27T04:54:32.951898Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:32.952791Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0003' from sub-workflow 'CallGenome'
[2026-05-27T04:54:32.955994Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0003] Task initiated on local node
[2026-05-27T04:54:33.017241Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:33.018025Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0004' from sub-workflow 'CallGenome'
[2026-05-27T04:54:33.021003Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0004] Task initiated on local node
[2026-05-27T04:54:33.082726Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:33.083578Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-05-27T04:54:33.086500Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0001] Task initiated on local node
[2026-05-27T04:54:33.148075Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:33.149089Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-05-27T04:54:33.152229Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0007] Task initiated on local node
[2026-05-27T04:54:34.166409Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:34.167701Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-05-27T04:54:34.171102Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0006] Task initiated on local node
[2026-05-27T04:54:34.232388Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:34.233647Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0002' from sub-workflow 'CallGenome'
[2026-05-27T04:54:34.237261Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0002] Task initiated on local node
[2026-05-27T04:54:34.950512Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:34.951435Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0005' from sub-workflow 'CallGenome'
[2026-05-27T04:54:34.955006Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0005] Task initiated on local node
[2026-05-27T04:54:35.420003Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0006] Task initiated on local node
[2026-05-27T04:54:35.467613Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:35.467720Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:35.467746Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:35.468647Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0006' from sub-workflow 'CallGenome'
[2026-05-27T04:54:35.468988Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0002' from sub-workflow 'CallGenome'
[2026-05-27T04:54:35.469417Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0003' from sub-workflow 'CallGenome'
[2026-05-27T04:54:35.472294Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0006] Task initiated on local node
[2026-05-27T04:54:35.475541Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0002] Task initiated on local node
[2026-05-27T04:54:35.535993Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:35.536742Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0004' from sub-workflow 'CallGenome'
[2026-05-27T04:54:35.540238Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0004] Task initiated on local node
[2026-05-27T04:54:35.544668Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0003] Task initiated on local node
[2026-05-27T04:54:35.552969Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:35.553751Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0002' from sub-workflow 'CallGenome'
[2026-05-27T04:54:35.556618Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0002] Task initiated on local node
[2026-05-27T04:54:35.585844Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:35.586597Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-05-27T04:54:35.589969Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0007] Task initiated on local node
[2026-05-27T04:54:35.594345Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:35.594869Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-05-27T04:54:35.597868Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0000] Task initiated on local node
[2026-05-27T04:54:35.602900Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:35.603465Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0004' from sub-workflow 'CallGenome'
[2026-05-27T04:54:35.606294Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0004] Task initiated on local node
[2026-05-27T04:54:35.635674Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:35.636761Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0000' from sub-workflow 'CallGenome'
[2026-05-27T04:54:35.637098Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:35.640019Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0002' from sub-workflow 'CallGenome'
[2026-05-27T04:54:35.640903Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0000] Task initiated on local node
[2026-05-27T04:54:35.643336Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0002] Task initiated on local node
[2026-05-27T04:54:35.672658Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:35.673678Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0001' from sub-workflow 'CallGenome'
[2026-05-27T04:54:35.674024Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:35.675002Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0005' from sub-workflow 'CallGenome'
[2026-05-27T04:54:35.678169Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0001] Task initiated on local node
[2026-05-27T04:54:35.679379Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0005] Task initiated on local node
[2026-05-27T04:54:35.739237Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:35.740050Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0000' from sub-workflow 'CallGenome'
[2026-05-27T04:54:35.742971Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0000] Task initiated on local node
[2026-05-27T04:54:35.804637Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:35.805549Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0003' from sub-workflow 'CallGenome'
[2026-05-27T04:54:35.808806Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0003] Task initiated on local node
[2026-05-27T04:54:35.837734Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:35.838376Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-05-27T04:54:35.841949Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0003] Task initiated on local node
[2026-05-27T04:54:35.854657Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:35.855331Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-05-27T04:54:35.857997Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0004] Task initiated on local node
[2026-05-27T04:54:35.919691Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:35.920493Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0001' from sub-workflow 'CallGenome'
[2026-05-27T04:54:35.924136Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0001] Task initiated on local node
[2026-05-27T04:54:36.336533Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:36.337544Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0002' from sub-workflow 'CallGenome'
[2026-05-27T04:54:36.340659Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0002] Task initiated on local node
[2026-05-27T04:54:36.402046Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:36.402816Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-05-27T04:54:36.406259Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0005] Task initiated on local node
[2026-05-27T04:54:36.718493Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:36.719143Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0003' from sub-workflow 'CallGenome'
[2026-05-27T04:54:36.722390Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0003] Task initiated on local node
[2026-05-27T04:54:36.783679Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:36.784818Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-05-27T04:54:36.787718Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0002] Task initiated on local node
[2026-05-27T04:54:36.849123Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:36.849936Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-05-27T04:54:36.853136Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0003] Task initiated on local node
[2026-05-27T04:54:36.914251Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:36.915025Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0004' from sub-workflow 'CallGenome'
[2026-05-27T04:54:36.918037Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0004] Task initiated on local node
[2026-05-27T04:54:36.923112Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:36.923755Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0005' from sub-workflow 'CallGenome'
[2026-05-27T04:54:36.926809Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0005] Task initiated on local node
[2026-05-27T04:54:36.955883Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:36.956766Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0006' from sub-workflow 'CallGenome'
[2026-05-27T04:54:36.959490Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0006] Task initiated on local node
[2026-05-27T04:54:36.960477Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:36.961069Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0003' from sub-workflow 'CallGenome'
[2026-05-27T04:54:36.963872Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0003] Task initiated on local node
[2026-05-27T04:54:36.993029Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:36.993123Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:36.994097Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-05-27T04:54:36.994704Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0000' from sub-workflow 'CallGenome'
[2026-05-27T04:54:36.997831Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_015_chr16_0000] Task initiated on local node
[2026-05-27T04:54:36.999180Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0000] Task initiated on local node
[2026-05-27T04:54:37.027036Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:37.027932Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0004' from sub-workflow 'CallGenome'
[2026-05-27T04:54:37.031512Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0004] Task initiated on local node
[2026-05-27T04:54:37.044164Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:37.044885Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0001' from sub-workflow 'CallGenome'
[2026-05-27T04:54:37.047604Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0001] Task initiated on local node
[2026-05-27T04:54:37.048547Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:37.049141Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-05-27T04:54:37.051797Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0000] Task initiated on local node
[2026-05-27T04:54:37.081275Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:37.089305Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:37.153651Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:37.154254Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-05-27T04:54:37.157459Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0004] Task initiated on local node
[2026-05-27T04:54:37.218783Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:37.283321Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:37.283863Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0000' from sub-workflow 'CallGenome'
[2026-05-27T04:54:37.286707Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0000] Task initiated on local node
[2026-05-27T04:54:37.348261Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:37.562899Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:37.563409Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0005' from sub-workflow 'CallGenome'
[2026-05-27T04:54:37.566849Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0005] Task initiated on local node
[2026-05-27T04:54:37.628114Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:37.792581Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:37.793099Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-05-27T04:54:37.795874Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0005] Task initiated on local node
[2026-05-27T04:54:37.825217Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:37.825716Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0001' from sub-workflow 'CallGenome'
[2026-05-27T04:54:37.828433Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0001] Task initiated on local node
[2026-05-27T04:54:37.841897Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:37.874080Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:38.589966Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:38.590358Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0004' from sub-workflow 'CallGenome'
[2026-05-27T04:54:38.593226Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0004] Task initiated on local node
[2026-05-27T04:54:38.622447Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:38.622681Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:38.622808Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-05-27T04:54:38.623523Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-27T04:54:38.625146Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-27T04:54:38.626355Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-05-27T04:54:38.628008Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-05-27T04:54:38.629115Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-05-27T04:54:38.658622Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:38.658682Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:38.658706Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:38.658902Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-05-27T04:54:38.659177Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-05-27T04:54:38.661678Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-05-27T04:54:38.662536Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-05-27T04:54:38.691146Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:38.691220Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:38.691405Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-05-27T04:54:38.693762Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-05-27T04:54:38.723615Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-27T04:54:41.844918Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-05-27T04:54:50.172997Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-05-27T04:54:50.172997Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] 
[2026-05-27T04:54:50.172997Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-05-27T04:54:50.173060Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] 
[2026-05-27T04:54:50.173067Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-05-27T04:54:50.173073Z] [nf-9ce38f8e841b6aba3d8c4f95821d2010-b029d-sktrs] [663_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec