File Info
- Filename
- HCC1395_tumor.csv
- Full Path
- s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ce/2ef7d0d76e7bbe6fa73bbdbcc429b7/HCC1395_tumor.csv
- Size
- 1.4 MB
- Attempt
Content
View in new tab| ReadGroup | CovariateValue | CovariateName | EventType | Observations | Errors | EmpiricalQuality | AverageReportedQuality | Accuracy | Recalibration |
| REGRESSION.HCC1395_tumor.L001 | AA | Context | Base Substitution | 522741 | 1338.70 | 26.00 | 29.64 | -3.64 | Before |
| REGRESSION.HCC1395_tumor.L001 | AAA | Context | Base Insertion | 177482 | 30.42 | 44.00 | 45.00 | -1.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | AAA | Context | Base Deletion | 177482 | 85.13 | 41.00 | 45.00 | -4.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | AAC | Context | Base Insertion | 85270 | 1.02 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | AAC | Context | Base Deletion | 85270 | 0.77 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | AAG | Context | Base Insertion | 134127 | 2.65 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | AAG | Context | Base Deletion | 134127 | 5.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | AAT | Context | Base Insertion | 100895 | 0.01 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | AAT | Context | Base Deletion | 100895 | 0.86 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | AC | Context | Base Substitution | 355810 | 1126.14 | 25.00 | 28.68 | -3.68 | Before |
| REGRESSION.HCC1395_tumor.L001 | ACA | Context | Base Insertion | 131768 | 3.67 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | ACA | Context | Base Deletion | 131768 | 5.03 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | ACC | Context | Base Insertion | 104363 | 2.92 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | ACC | Context | Base Deletion | 104363 | 1.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | ACG | Context | Base Insertion | 20341 | 0.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | ACG | Context | Base Deletion | 20341 | 1.67 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | ACT | Context | Base Insertion | 104569 | 0.61 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | ACT | Context | Base Deletion | 104569 | 3.75 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | AG | Context | Base Substitution | 560304 | 519.87 | 30.00 | 31.82 | -1.82 | Before |
| REGRESSION.HCC1395_tumor.L001 | AGA | Context | Base Insertion | 151049 | 1.91 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | AGA | Context | Base Deletion | 151049 | 4.09 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | AGC | Context | Base Insertion | 139847 | 0.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | AGC | Context | Base Deletion | 139847 | 3.90 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | AGG | Context | Base Insertion | 163060 | 4.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | AGG | Context | Base Deletion | 163060 | 3.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | AGT | Context | Base Insertion | 102973 | 0.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | AGT | Context | Base Deletion | 102973 | 5.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | AT | Context | Base Substitution | 366874 | 467.75 | 29.00 | 32.17 | -3.17 | Before |
| REGRESSION.HCC1395_tumor.L001 | ATA | Context | Base Insertion | 73829 | 0.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | ATA | Context | Base Deletion | 73829 | 0.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | ATC | Context | Base Insertion | 78273 | 0.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | ATC | Context | Base Deletion | 78273 | 0.91 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | ATG | Context | Base Insertion | 114465 | 1.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | ATG | Context | Base Deletion | 114465 | 0.57 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | ATT | Context | Base Insertion | 108035 | 0.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | ATT | Context | Base Deletion | 108035 | 2.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | CA | Context | Base Substitution | 593080 | 1226.03 | 27.00 | 30.01 | -3.01 | Before |
| REGRESSION.HCC1395_tumor.L001 | CAA | Context | Base Insertion | 112268 | 4.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | CAA | Context | Base Deletion | 112268 | 4.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | CAC | Context | Base Insertion | 124762 | 5.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | CAC | Context | Base Deletion | 124762 | 5.07 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | CAG | Context | Base Insertion | 212968 | 5.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | CAG | Context | Base Deletion | 212968 | 8.78 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | CAT | Context | Base Insertion | 110632 | 0.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | CAT | Context | Base Deletion | 110632 | 1.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | CC | Context | Base Substitution | 550117 | 1751.43 | 25.00 | 28.95 | -3.95 | Before |
| REGRESSION.HCC1395_tumor.L001 | CCA | Context | Base Insertion | 176349 | 2.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | CCA | Context | Base Deletion | 176349 | 2.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | CCC | Context | Base Insertion | 151127 | 5.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | CCC | Context | Base Deletion | 151127 | 5.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | CCG | Context | Base Insertion | 36635 | 0.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | CCG | Context | Base Deletion | 36635 | 1.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | CCT | Context | Base Insertion | 177890 | 1.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | CCT | Context | Base Deletion | 177890 | 5.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | CG | Context | Base Substitution | 111585 | 352.01 | 26.00 | 29.91 | -3.91 | Before |
| REGRESSION.HCC1395_tumor.L001 | CGA | Context | Base Insertion | 44199 | 3.04 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | CGA | Context | Base Deletion | 44199 | 0.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | CGC | Context | Base Insertion | 63184 | 0.65 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | CGC | Context | Base Deletion | 63184 | 2.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | CGG | Context | Base Insertion | 76416 | 1.12 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | CGG | Context | Base Deletion | 76416 | 3.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | CGT | Context | Base Insertion | 49409 | 0.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | CGT | Context | Base Deletion | 49409 | 0.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | CT | Context | Base Substitution | 594779 | 439.62 | 31.00 | 32.51 | -1.51 | Before |
| REGRESSION.HCC1395_tumor.L001 | CTA | Context | Base Insertion | 58086 | 0.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | CTA | Context | Base Deletion | 58086 | 3.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | CTC | Context | Base Insertion | 145186 | 1.60 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | CTC | Context | Base Deletion | 145186 | 9.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | CTG | Context | Base Insertion | 213484 | 0.83 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | CTG | Context | Base Deletion | 213484 | 5.98 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | CTT | Context | Base Insertion | 146241 | 2.12 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | CTT | Context | Base Deletion | 146241 | 4.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | GA | Context | Base Substitution | 494026 | 807.43 | 28.00 | 29.73 | -1.73 | Before |
| REGRESSION.HCC1395_tumor.L001 | GAA | Context | Base Insertion | 141324 | 1.61 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | GAA | Context | Base Deletion | 141324 | 3.07 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | GAC | Context | Base Insertion | 83595 | 0.81 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | GAC | Context | Base Deletion | 83595 | 0.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | GAG | Context | Base Insertion | 149025 | 0.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | GAG | Context | Base Deletion | 149025 | 3.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | GAT | Context | Base Insertion | 82676 | 0.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | GAT | Context | Base Deletion | 82676 | 1.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | GC | Context | Base Substitution | 486449 | 1081.35 | 27.00 | 30.31 | -3.31 | Before |
| REGRESSION.HCC1395_tumor.L001 | GCA | Context | Base Insertion | 148396 | 2.66 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | GCA | Context | Base Deletion | 148396 | 3.60 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | GCC | Context | Base Insertion | 146283 | 0.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | GCC | Context | Base Deletion | 146283 | 5.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | GCG | Context | Base Insertion | 35537 | 0.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | GCG | Context | Base Deletion | 35537 | 1.96 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | GCT | Context | Base Insertion | 155357 | 1.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | GCT | Context | Base Deletion | 155357 | 2.78 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | GG | Context | Base Substitution | 574848 | 755.72 | 29.00 | 31.74 | -2.74 | Before |
| REGRESSION.HCC1395_tumor.L001 | GGA | Context | Base Insertion | 155937 | 2.83 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | GGA | Context | Base Deletion | 155937 | 5.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | GGC | Context | Base Insertion | 144363 | 0.90 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | GGC | Context | Base Deletion | 144363 | 5.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | GGG | Context | Base Insertion | 157522 | 3.69 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | GGG | Context | Base Deletion | 157522 | 11.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | GGT | Context | Base Insertion | 114712 | 1.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | GGT | Context | Base Deletion | 114712 | 1.73 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | GT | Context | Base Substitution | 408594 | 693.56 | 28.00 | 32.23 | -4.23 | Before |
| REGRESSION.HCC1395_tumor.L001 | GTA | Context | Base Insertion | 66253 | 1.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | GTA | Context | Base Deletion | 66253 | 0.61 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | GTC | Context | Base Insertion | 91325 | 1.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | GTC | Context | Base Deletion | 91325 | 0.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | GTG | Context | Base Insertion | 139770 | 1.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | GTG | Context | Base Deletion | 139770 | 10.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | GTT | Context | Base Insertion | 99489 | 0.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | GTT | Context | Base Deletion | 99489 | 1.93 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | TA | Context | Base Substitution | 286844 | 782.92 | 26.00 | 29.80 | -3.80 | Before |
| REGRESSION.HCC1395_tumor.L001 | TAA | Context | Base Insertion | 87095 | 1.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | TAA | Context | Base Deletion | 87095 | 4.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | TAC | Context | Base Insertion | 59860 | 0.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | TAC | Context | Base Deletion | 59860 | 3.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | TAG | Context | Base Insertion | 59720 | 0.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | TAG | Context | Base Deletion | 59720 | 0.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | TAT | Context | Base Insertion | 70044 | 0.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | TAT | Context | Base Deletion | 70044 | 0.90 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | TC | Context | Base Substitution | 447139 | 998.84 | 27.00 | 30.51 | -3.51 | Before |
| REGRESSION.HCC1395_tumor.L001 | TCA | Context | Base Insertion | 131794 | 2.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | TCA | Context | Base Deletion | 131794 | 5.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | TCC | Context | Base Insertion | 144773 | 0.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | TCC | Context | Base Deletion | 144773 | 3.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | TCG | Context | Base Insertion | 18213 | 0.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | TCG | Context | Base Deletion | 18213 | 0.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | TCT | Context | Base Insertion | 152906 | 2.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | TCT | Context | Base Deletion | 152906 | 5.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | TG | Context | Base Substitution | 585781 | 455.22 | 31.00 | 31.83 | -0.83 | Before |
| REGRESSION.HCC1395_tumor.L001 | TGA | Context | Base Insertion | 138949 | 0.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | TGA | Context | Base Deletion | 138949 | 0.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | TGC | Context | Base Insertion | 135884 | 1.69 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | TGC | Context | Base Deletion | 135884 | 2.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | TGG | Context | Base Insertion | 173596 | 0.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | TGG | Context | Base Deletion | 173596 | 6.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | TGT | Context | Base Insertion | 138840 | 1.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | TGT | Context | Base Deletion | 138840 | 7.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | TT | Context | Base Substitution | 534858 | 695.23 | 29.00 | 32.84 | -3.84 | Before |
| REGRESSION.HCC1395_tumor.L001 | TTA | Context | Base Insertion | 86447 | 2.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | TTA | Context | Base Deletion | 86447 | 4.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | TTC | Context | Base Insertion | 129740 | 0.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | TTC | Context | Base Deletion | 129740 | 5.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | TTG | Context | Base Insertion | 113852 | 0.09 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | TTG | Context | Base Deletion | 113852 | 2.82 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | TTT | Context | Base Insertion | 177479 | 22.28 | 44.00 | 45.00 | -1.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | TTT | Context | Base Deletion | 177479 | 53.51 | 42.00 | 45.00 | -3.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -1 | Cycle | Base Substitution | 26565 | 89.07 | 25.00 | 25.98 | -0.98 | Before |
| REGRESSION.HCC1395_tumor.L001 | -10 | Cycle | Base Substitution | 26785 | 42.45 | 31.00 | 32.17 | -1.17 | Before |
| REGRESSION.HCC1395_tumor.L001 | -10 | Cycle | Base Insertion | 26785 | 0.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -10 | Cycle | Base Deletion | 26785 | 1.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -100 | Cycle | Base Substitution | 24859 | 39.57 | 29.00 | 30.08 | -1.08 | Before |
| REGRESSION.HCC1395_tumor.L001 | -100 | Cycle | Base Insertion | 24625 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -100 | Cycle | Base Deletion | 24625 | 1.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -101 | Cycle | Base Substitution | 24762 | 54.37 | 29.00 | 30.29 | -1.29 | Before |
| REGRESSION.HCC1395_tumor.L001 | -101 | Cycle | Base Insertion | 24523 | 0.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -101 | Cycle | Base Deletion | 24523 | 1.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -102 | Cycle | Base Substitution | 24695 | 54.42 | 29.00 | 30.36 | -1.36 | Before |
| REGRESSION.HCC1395_tumor.L001 | -102 | Cycle | Base Insertion | 24438 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -102 | Cycle | Base Deletion | 24438 | 0.84 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -103 | Cycle | Base Substitution | 24521 | 49.33 | 29.00 | 30.33 | -1.33 | Before |
| REGRESSION.HCC1395_tumor.L001 | -103 | Cycle | Base Insertion | 24265 | 0.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -103 | Cycle | Base Deletion | 24265 | 1.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -104 | Cycle | Base Substitution | 24491 | 39.27 | 29.00 | 30.11 | -1.11 | Before |
| REGRESSION.HCC1395_tumor.L001 | -104 | Cycle | Base Insertion | 24207 | 0.69 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -104 | Cycle | Base Deletion | 24207 | 1.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -105 | Cycle | Base Substitution | 24398 | 47.13 | 28.00 | 29.85 | -1.85 | Before |
| REGRESSION.HCC1395_tumor.L001 | -105 | Cycle | Base Insertion | 24107 | 0.83 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -105 | Cycle | Base Deletion | 24107 | 1.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -106 | Cycle | Base Substitution | 24453 | 46.46 | 28.00 | 29.82 | -1.82 | Before |
| REGRESSION.HCC1395_tumor.L001 | -106 | Cycle | Base Insertion | 24182 | 0.60 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -106 | Cycle | Base Deletion | 24182 | 1.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -107 | Cycle | Base Substitution | 24271 | 43.68 | 28.00 | 29.97 | -1.97 | Before |
| REGRESSION.HCC1395_tumor.L001 | -107 | Cycle | Base Insertion | 24008 | 0.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -107 | Cycle | Base Deletion | 24008 | 0.98 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -108 | Cycle | Base Substitution | 24269 | 48.24 | 29.00 | 30.41 | -1.41 | Before |
| REGRESSION.HCC1395_tumor.L001 | -108 | Cycle | Base Insertion | 24000 | 0.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -108 | Cycle | Base Deletion | 24000 | 1.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -109 | Cycle | Base Substitution | 24205 | 41.50 | 29.00 | 30.31 | -1.31 | Before |
| REGRESSION.HCC1395_tumor.L001 | -109 | Cycle | Base Insertion | 23952 | 0.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -109 | Cycle | Base Deletion | 23952 | 1.90 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -11 | Cycle | Base Substitution | 26835 | 44.10 | 30.00 | 31.62 | -1.62 | Before |
| REGRESSION.HCC1395_tumor.L001 | -11 | Cycle | Base Insertion | 26835 | 0.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -11 | Cycle | Base Deletion | 26835 | 1.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -110 | Cycle | Base Substitution | 24193 | 50.41 | 29.00 | 30.05 | -1.05 | Before |
| REGRESSION.HCC1395_tumor.L001 | -110 | Cycle | Base Insertion | 23914 | 0.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -110 | Cycle | Base Deletion | 23914 | 0.88 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -111 | Cycle | Base Substitution | 24080 | 44.56 | 28.00 | 29.99 | -1.99 | Before |
| REGRESSION.HCC1395_tumor.L001 | -111 | Cycle | Base Insertion | 23781 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -111 | Cycle | Base Deletion | 23781 | 0.91 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -112 | Cycle | Base Substitution | 24081 | 35.67 | 29.00 | 30.27 | -1.27 | Before |
| REGRESSION.HCC1395_tumor.L001 | -112 | Cycle | Base Insertion | 23785 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -112 | Cycle | Base Deletion | 23785 | 1.03 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -113 | Cycle | Base Substitution | 23999 | 26.69 | 30.00 | 30.30 | -0.30 | Before |
| REGRESSION.HCC1395_tumor.L001 | -113 | Cycle | Base Insertion | 23715 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -113 | Cycle | Base Deletion | 23715 | 0.75 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -114 | Cycle | Base Substitution | 23926 | 38.59 | 29.00 | 30.08 | -1.08 | Before |
| REGRESSION.HCC1395_tumor.L001 | -114 | Cycle | Base Insertion | 23657 | 0.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -114 | Cycle | Base Deletion | 23657 | 1.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -115 | Cycle | Base Substitution | 23935 | 52.23 | 28.00 | 29.93 | -1.93 | Before |
| REGRESSION.HCC1395_tumor.L001 | -115 | Cycle | Base Insertion | 23669 | 0.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -115 | Cycle | Base Deletion | 23669 | 0.91 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -116 | Cycle | Base Substitution | 23752 | 47.00 | 29.00 | 30.40 | -1.40 | Before |
| REGRESSION.HCC1395_tumor.L001 | -116 | Cycle | Base Insertion | 23485 | 0.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -116 | Cycle | Base Deletion | 23485 | 1.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -117 | Cycle | Base Substitution | 23668 | 49.31 | 28.00 | 29.86 | -1.86 | Before |
| REGRESSION.HCC1395_tumor.L001 | -117 | Cycle | Base Insertion | 23384 | 0.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -117 | Cycle | Base Deletion | 23384 | 0.80 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -118 | Cycle | Base Substitution | 23683 | 37.99 | 29.00 | 30.30 | -1.30 | Before |
| REGRESSION.HCC1395_tumor.L001 | -118 | Cycle | Base Insertion | 23375 | 0.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -118 | Cycle | Base Deletion | 23375 | 0.66 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -119 | Cycle | Base Substitution | 23584 | 48.25 | 29.00 | 30.06 | -1.06 | Before |
| REGRESSION.HCC1395_tumor.L001 | -119 | Cycle | Base Insertion | 23274 | 0.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -119 | Cycle | Base Deletion | 23274 | 0.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -12 | Cycle | Base Substitution | 26782 | 31.88 | 30.00 | 31.93 | -1.93 | Before |
| REGRESSION.HCC1395_tumor.L001 | -12 | Cycle | Base Insertion | 26782 | 0.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -12 | Cycle | Base Deletion | 26782 | 1.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -120 | Cycle | Base Substitution | 23489 | 53.35 | 28.00 | 29.98 | -1.98 | Before |
| REGRESSION.HCC1395_tumor.L001 | -120 | Cycle | Base Insertion | 23204 | 0.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -120 | Cycle | Base Deletion | 23204 | 0.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -121 | Cycle | Base Substitution | 23531 | 56.61 | 28.00 | 29.86 | -1.86 | Before |
| REGRESSION.HCC1395_tumor.L001 | -121 | Cycle | Base Insertion | 23245 | 0.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -121 | Cycle | Base Deletion | 23245 | 0.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -122 | Cycle | Base Substitution | 23361 | 44.74 | 28.00 | 29.66 | -1.66 | Before |
| REGRESSION.HCC1395_tumor.L001 | -122 | Cycle | Base Insertion | 23092 | 0.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -122 | Cycle | Base Deletion | 23092 | 0.82 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -123 | Cycle | Base Substitution | 23321 | 59.95 | 28.00 | 29.70 | -1.70 | Before |
| REGRESSION.HCC1395_tumor.L001 | -123 | Cycle | Base Insertion | 23040 | 0.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -123 | Cycle | Base Deletion | 23040 | 0.92 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -124 | Cycle | Base Substitution | 23275 | 37.41 | 29.00 | 30.19 | -1.19 | Before |
| REGRESSION.HCC1395_tumor.L001 | -124 | Cycle | Base Insertion | 22964 | 0.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -124 | Cycle | Base Deletion | 22964 | 0.84 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -125 | Cycle | Base Substitution | 23201 | 49.66 | 28.00 | 29.66 | -1.66 | Before |
| REGRESSION.HCC1395_tumor.L001 | -125 | Cycle | Base Insertion | 22895 | 0.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -125 | Cycle | Base Deletion | 22895 | 0.60 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -126 | Cycle | Base Substitution | 23171 | 46.17 | 28.00 | 29.77 | -1.77 | Before |
| REGRESSION.HCC1395_tumor.L001 | -126 | Cycle | Base Insertion | 22858 | 1.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -126 | Cycle | Base Deletion | 22858 | 1.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -127 | Cycle | Base Substitution | 23184 | 54.12 | 28.00 | 29.89 | -1.89 | Before |
| REGRESSION.HCC1395_tumor.L001 | -127 | Cycle | Base Insertion | 22877 | 0.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -127 | Cycle | Base Deletion | 22877 | 1.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -128 | Cycle | Base Substitution | 22989 | 47.33 | 29.00 | 30.24 | -1.24 | Before |
| REGRESSION.HCC1395_tumor.L001 | -128 | Cycle | Base Insertion | 22682 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -128 | Cycle | Base Deletion | 22682 | 1.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -129 | Cycle | Base Substitution | 22939 | 57.60 | 28.00 | 30.01 | -2.01 | Before |
| REGRESSION.HCC1395_tumor.L001 | -129 | Cycle | Base Insertion | 22643 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -129 | Cycle | Base Deletion | 22643 | 1.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -13 | Cycle | Base Substitution | 26779 | 39.89 | 30.00 | 31.74 | -1.74 | Before |
| REGRESSION.HCC1395_tumor.L001 | -13 | Cycle | Base Insertion | 26779 | 0.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -13 | Cycle | Base Deletion | 26779 | 1.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -130 | Cycle | Base Substitution | 22897 | 33.44 | 30.00 | 30.05 | -0.05 | Before |
| REGRESSION.HCC1395_tumor.L001 | -130 | Cycle | Base Insertion | 22582 | 0.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -130 | Cycle | Base Deletion | 22582 | 0.99 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -131 | Cycle | Base Substitution | 22819 | 40.92 | 28.00 | 29.85 | -1.85 | Before |
| REGRESSION.HCC1395_tumor.L001 | -131 | Cycle | Base Insertion | 22490 | 0.07 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -131 | Cycle | Base Deletion | 22490 | 0.73 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -132 | Cycle | Base Substitution | 22797 | 43.59 | 28.00 | 29.87 | -1.87 | Before |
| REGRESSION.HCC1395_tumor.L001 | -132 | Cycle | Base Insertion | 22456 | 1.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -132 | Cycle | Base Deletion | 22456 | 0.84 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -133 | Cycle | Base Substitution | 22650 | 42.36 | 28.00 | 29.84 | -1.84 | Before |
| REGRESSION.HCC1395_tumor.L001 | -133 | Cycle | Base Insertion | 22307 | 0.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -133 | Cycle | Base Deletion | 22307 | 0.84 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -134 | Cycle | Base Substitution | 22538 | 35.10 | 29.00 | 29.85 | -0.85 | Before |
| REGRESSION.HCC1395_tumor.L001 | -134 | Cycle | Base Insertion | 22209 | 0.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -134 | Cycle | Base Deletion | 22209 | 1.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -135 | Cycle | Base Substitution | 22479 | 49.39 | 28.00 | 29.61 | -1.61 | Before |
| REGRESSION.HCC1395_tumor.L001 | -135 | Cycle | Base Insertion | 22144 | 0.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -135 | Cycle | Base Deletion | 22144 | 1.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -136 | Cycle | Base Substitution | 22363 | 47.28 | 28.00 | 29.84 | -1.84 | Before |
| REGRESSION.HCC1395_tumor.L001 | -136 | Cycle | Base Insertion | 22021 | 0.07 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -136 | Cycle | Base Deletion | 22021 | 0.87 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -137 | Cycle | Base Substitution | 22257 | 35.82 | 29.00 | 29.56 | -0.56 | Before |
| REGRESSION.HCC1395_tumor.L001 | -137 | Cycle | Base Insertion | 21907 | 0.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -137 | Cycle | Base Deletion | 21907 | 0.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -138 | Cycle | Base Substitution | 22228 | 36.64 | 29.00 | 29.82 | -0.82 | Before |
| REGRESSION.HCC1395_tumor.L001 | -138 | Cycle | Base Insertion | 21845 | 0.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -138 | Cycle | Base Deletion | 21845 | 0.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -139 | Cycle | Base Substitution | 22185 | 48.11 | 28.00 | 29.52 | -1.52 | Before |
| REGRESSION.HCC1395_tumor.L001 | -139 | Cycle | Base Insertion | 21813 | 0.60 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -139 | Cycle | Base Deletion | 21813 | 0.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -14 | Cycle | Base Substitution | 26791 | 45.08 | 30.00 | 31.86 | -1.86 | Before |
| REGRESSION.HCC1395_tumor.L001 | -14 | Cycle | Base Insertion | 26791 | 0.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -14 | Cycle | Base Deletion | 26791 | 1.61 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -140 | Cycle | Base Substitution | 22184 | 34.37 | 29.00 | 29.85 | -0.85 | Before |
| REGRESSION.HCC1395_tumor.L001 | -140 | Cycle | Base Insertion | 21779 | 0.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -140 | Cycle | Base Deletion | 21779 | 0.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -141 | Cycle | Base Substitution | 22042 | 28.54 | 29.00 | 29.66 | -0.66 | Before |
| REGRESSION.HCC1395_tumor.L001 | -141 | Cycle | Base Insertion | 21623 | 0.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -141 | Cycle | Base Deletion | 21623 | 0.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -142 | Cycle | Base Substitution | 21947 | 30.00 | 29.00 | 29.77 | -0.77 | Before |
| REGRESSION.HCC1395_tumor.L001 | -142 | Cycle | Base Insertion | 21511 | 0.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -142 | Cycle | Base Deletion | 21511 | 0.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -143 | Cycle | Base Substitution | 21773 | 31.13 | 29.00 | 29.88 | -0.88 | Before |
| REGRESSION.HCC1395_tumor.L001 | -143 | Cycle | Base Insertion | 21329 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -143 | Cycle | Base Deletion | 21329 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -144 | Cycle | Base Substitution | 21700 | 35.39 | 29.00 | 29.65 | -0.65 | Before |
| REGRESSION.HCC1395_tumor.L001 | -144 | Cycle | Base Insertion | 21240 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -144 | Cycle | Base Deletion | 21240 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -145 | Cycle | Base Substitution | 21609 | 39.02 | 29.00 | 30.04 | -1.04 | Before |
| REGRESSION.HCC1395_tumor.L001 | -145 | Cycle | Base Insertion | 16602 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -145 | Cycle | Base Deletion | 16602 | 0.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -146 | Cycle | Base Substitution | 21520 | 64.54 | 27.00 | 29.97 | -2.97 | Before |
| REGRESSION.HCC1395_tumor.L001 | -146 | Cycle | Base Insertion | 16524 | 1.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -146 | Cycle | Base Deletion | 16524 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -147 | Cycle | Base Substitution | 21391 | 222.65 | 23.00 | 30.16 | -7.16 | Before |
| REGRESSION.HCC1395_tumor.L001 | -148 | Cycle | Base Substitution | 21215 | 850.73 | 15.00 | 30.31 | -15.31 | Before |
| REGRESSION.HCC1395_tumor.L001 | -149 | Cycle | Base Substitution | 13230 | 773.61 | 14.00 | 30.95 | -16.95 | Before |
| REGRESSION.HCC1395_tumor.L001 | -15 | Cycle | Base Substitution | 26692 | 31.78 | 31.00 | 32.03 | -1.03 | Before |
| REGRESSION.HCC1395_tumor.L001 | -15 | Cycle | Base Insertion | 26692 | 0.57 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -15 | Cycle | Base Deletion | 26692 | 1.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -150 | Cycle | Base Substitution | 4662 | 7.51 | 30.00 | 30.50 | -0.50 | Before |
| REGRESSION.HCC1395_tumor.L001 | -16 | Cycle | Base Substitution | 26697 | 40.78 | 30.00 | 31.67 | -1.67 | Before |
| REGRESSION.HCC1395_tumor.L001 | -16 | Cycle | Base Insertion | 26697 | 0.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -16 | Cycle | Base Deletion | 26697 | 1.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -17 | Cycle | Base Substitution | 26774 | 41.70 | 30.00 | 31.76 | -1.76 | Before |
| REGRESSION.HCC1395_tumor.L001 | -17 | Cycle | Base Insertion | 26774 | 0.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -17 | Cycle | Base Deletion | 26774 | 1.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -18 | Cycle | Base Substitution | 26790 | 29.31 | 31.00 | 32.05 | -1.05 | Before |
| REGRESSION.HCC1395_tumor.L001 | -18 | Cycle | Base Insertion | 26790 | 0.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -18 | Cycle | Base Deletion | 26790 | 1.60 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -19 | Cycle | Base Substitution | 26627 | 38.39 | 30.00 | 31.51 | -1.51 | Before |
| REGRESSION.HCC1395_tumor.L001 | -19 | Cycle | Base Insertion | 26627 | 0.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -19 | Cycle | Base Deletion | 26627 | 1.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -2 | Cycle | Base Substitution | 26982 | 72.68 | 27.00 | 28.63 | -1.63 | Before |
| REGRESSION.HCC1395_tumor.L001 | -20 | Cycle | Base Substitution | 26769 | 35.20 | 30.00 | 31.60 | -1.60 | Before |
| REGRESSION.HCC1395_tumor.L001 | -20 | Cycle | Base Insertion | 26769 | 0.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -20 | Cycle | Base Deletion | 26769 | 1.78 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -21 | Cycle | Base Substitution | 26642 | 35.45 | 31.00 | 32.14 | -1.14 | Before |
| REGRESSION.HCC1395_tumor.L001 | -21 | Cycle | Base Insertion | 26642 | 0.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -21 | Cycle | Base Deletion | 26642 | 1.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -22 | Cycle | Base Substitution | 26701 | 40.89 | 31.00 | 32.14 | -1.14 | Before |
| REGRESSION.HCC1395_tumor.L001 | -22 | Cycle | Base Insertion | 26701 | 0.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -22 | Cycle | Base Deletion | 26701 | 1.65 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -23 | Cycle | Base Substitution | 26646 | 31.70 | 31.00 | 32.08 | -1.08 | Before |
| REGRESSION.HCC1395_tumor.L001 | -23 | Cycle | Base Insertion | 26646 | 0.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -23 | Cycle | Base Deletion | 26646 | 1.77 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -24 | Cycle | Base Substitution | 26654 | 38.63 | 30.00 | 31.94 | -1.94 | Before |
| REGRESSION.HCC1395_tumor.L001 | -24 | Cycle | Base Insertion | 26654 | 0.85 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -24 | Cycle | Base Deletion | 26654 | 1.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -25 | Cycle | Base Substitution | 26651 | 35.33 | 30.00 | 31.72 | -1.72 | Before |
| REGRESSION.HCC1395_tumor.L001 | -25 | Cycle | Base Insertion | 26651 | 1.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -25 | Cycle | Base Deletion | 26651 | 1.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -26 | Cycle | Base Substitution | 26525 | 34.95 | 30.00 | 30.64 | -0.64 | Before |
| REGRESSION.HCC1395_tumor.L001 | -26 | Cycle | Base Insertion | 26525 | 0.79 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -26 | Cycle | Base Deletion | 26525 | 0.99 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -27 | Cycle | Base Substitution | 26635 | 32.19 | 30.00 | 30.14 | -0.14 | Before |
| REGRESSION.HCC1395_tumor.L001 | -27 | Cycle | Base Insertion | 26635 | 0.98 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -27 | Cycle | Base Deletion | 26635 | 1.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -28 | Cycle | Base Substitution | 26679 | 46.31 | 29.00 | 30.01 | -1.01 | Before |
| REGRESSION.HCC1395_tumor.L001 | -28 | Cycle | Base Insertion | 26679 | 0.62 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -28 | Cycle | Base Deletion | 26679 | 1.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -29 | Cycle | Base Substitution | 26641 | 27.40 | 30.00 | 30.71 | -0.71 | Before |
| REGRESSION.HCC1395_tumor.L001 | -29 | Cycle | Base Insertion | 26641 | 0.74 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -29 | Cycle | Base Deletion | 26641 | 1.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -3 | Cycle | Base Substitution | 27040 | 68.62 | 28.00 | 29.87 | -1.87 | Before |
| REGRESSION.HCC1395_tumor.L001 | -30 | Cycle | Base Substitution | 26589 | 46.95 | 29.00 | 30.59 | -1.59 | Before |
| REGRESSION.HCC1395_tumor.L001 | -30 | Cycle | Base Insertion | 26588 | 0.92 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -30 | Cycle | Base Deletion | 26588 | 1.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -31 | Cycle | Base Substitution | 26609 | 37.40 | 30.00 | 30.45 | -0.45 | Before |
| REGRESSION.HCC1395_tumor.L001 | -31 | Cycle | Base Insertion | 26608 | 0.82 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -31 | Cycle | Base Deletion | 26608 | 1.65 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -32 | Cycle | Base Substitution | 26518 | 39.56 | 29.00 | 30.52 | -1.52 | Before |
| REGRESSION.HCC1395_tumor.L001 | -32 | Cycle | Base Insertion | 26517 | 0.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -32 | Cycle | Base Deletion | 26517 | 1.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -33 | Cycle | Base Substitution | 26578 | 31.63 | 30.00 | 30.61 | -0.61 | Before |
| REGRESSION.HCC1395_tumor.L001 | -33 | Cycle | Base Insertion | 26577 | 1.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -33 | Cycle | Base Deletion | 26577 | 1.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -34 | Cycle | Base Substitution | 26545 | 28.86 | 30.00 | 30.77 | -0.77 | Before |
| REGRESSION.HCC1395_tumor.L001 | -34 | Cycle | Base Insertion | 26544 | 0.60 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -34 | Cycle | Base Deletion | 26544 | 1.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -35 | Cycle | Base Substitution | 26497 | 35.06 | 30.00 | 30.53 | -0.53 | Before |
| REGRESSION.HCC1395_tumor.L001 | -35 | Cycle | Base Insertion | 26496 | 1.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -35 | Cycle | Base Deletion | 26496 | 1.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -36 | Cycle | Base Substitution | 26582 | 38.44 | 29.00 | 30.58 | -1.58 | Before |
| REGRESSION.HCC1395_tumor.L001 | -36 | Cycle | Base Insertion | 26582 | 0.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -36 | Cycle | Base Deletion | 26582 | 1.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -37 | Cycle | Base Substitution | 26559 | 30.93 | 30.00 | 30.53 | -0.53 | Before |
| REGRESSION.HCC1395_tumor.L001 | -37 | Cycle | Base Insertion | 26558 | 0.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -37 | Cycle | Base Deletion | 26558 | 1.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -38 | Cycle | Base Substitution | 26433 | 41.90 | 29.00 | 30.78 | -1.78 | Before |
| REGRESSION.HCC1395_tumor.L001 | -38 | Cycle | Base Insertion | 26431 | 0.96 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -38 | Cycle | Base Deletion | 26431 | 1.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -39 | Cycle | Base Substitution | 26481 | 36.37 | 30.00 | 30.62 | -0.62 | Before |
| REGRESSION.HCC1395_tumor.L001 | -39 | Cycle | Base Insertion | 26480 | 0.98 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -39 | Cycle | Base Deletion | 26480 | 1.69 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -4 | Cycle | Base Substitution | 26902 | 62.40 | 28.00 | 29.93 | -1.93 | Before |
| REGRESSION.HCC1395_tumor.L001 | -40 | Cycle | Base Substitution | 26451 | 32.72 | 30.00 | 30.66 | -0.66 | Before |
| REGRESSION.HCC1395_tumor.L001 | -40 | Cycle | Base Insertion | 26450 | 0.84 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -40 | Cycle | Base Deletion | 26450 | 1.81 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -41 | Cycle | Base Substitution | 26406 | 29.91 | 30.00 | 30.60 | -0.60 | Before |
| REGRESSION.HCC1395_tumor.L001 | -41 | Cycle | Base Insertion | 26403 | 0.88 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -41 | Cycle | Base Deletion | 26403 | 1.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -42 | Cycle | Base Substitution | 26490 | 33.97 | 30.00 | 30.78 | -0.78 | Before |
| REGRESSION.HCC1395_tumor.L001 | -42 | Cycle | Base Insertion | 26486 | 0.74 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -42 | Cycle | Base Deletion | 26486 | 1.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -43 | Cycle | Base Substitution | 26523 | 32.28 | 30.00 | 30.63 | -0.63 | Before |
| REGRESSION.HCC1395_tumor.L001 | -43 | Cycle | Base Insertion | 26517 | 0.95 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -43 | Cycle | Base Deletion | 26517 | 1.77 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -44 | Cycle | Base Substitution | 26527 | 37.66 | 29.00 | 30.75 | -1.75 | Before |
| REGRESSION.HCC1395_tumor.L001 | -44 | Cycle | Base Insertion | 26519 | 0.82 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -44 | Cycle | Base Deletion | 26519 | 1.83 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -45 | Cycle | Base Substitution | 26503 | 38.22 | 29.00 | 30.55 | -1.55 | Before |
| REGRESSION.HCC1395_tumor.L001 | -45 | Cycle | Base Insertion | 26493 | 0.87 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -45 | Cycle | Base Deletion | 26493 | 2.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -46 | Cycle | Base Substitution | 26454 | 34.15 | 30.00 | 30.91 | -0.91 | Before |
| REGRESSION.HCC1395_tumor.L001 | -46 | Cycle | Base Insertion | 26446 | 1.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -46 | Cycle | Base Deletion | 26446 | 2.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -47 | Cycle | Base Substitution | 26391 | 39.19 | 29.00 | 30.74 | -1.74 | Before |
| REGRESSION.HCC1395_tumor.L001 | -47 | Cycle | Base Insertion | 26385 | 0.90 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -47 | Cycle | Base Deletion | 26385 | 1.85 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -48 | Cycle | Base Substitution | 26319 | 34.73 | 30.00 | 30.85 | -0.85 | Before |
| REGRESSION.HCC1395_tumor.L001 | -48 | Cycle | Base Insertion | 26310 | 0.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -48 | Cycle | Base Deletion | 26310 | 1.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -49 | Cycle | Base Substitution | 26425 | 32.84 | 30.00 | 30.41 | -0.41 | Before |
| REGRESSION.HCC1395_tumor.L001 | -49 | Cycle | Base Insertion | 26411 | 0.91 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -49 | Cycle | Base Deletion | 26411 | 1.74 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -5 | Cycle | Base Substitution | 26904 | 38.40 | 29.00 | 30.97 | -1.97 | Before |
| REGRESSION.HCC1395_tumor.L001 | -5 | Cycle | Base Insertion | 26904 | 0.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -5 | Cycle | Base Deletion | 26904 | 0.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -50 | Cycle | Base Substitution | 26447 | 43.30 | 29.00 | 30.75 | -1.75 | Before |
| REGRESSION.HCC1395_tumor.L001 | -50 | Cycle | Base Insertion | 26428 | 1.07 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -50 | Cycle | Base Deletion | 26428 | 1.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -51 | Cycle | Base Substitution | 26523 | 47.17 | 29.00 | 30.80 | -1.80 | Before |
| REGRESSION.HCC1395_tumor.L001 | -51 | Cycle | Base Insertion | 26506 | 0.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -51 | Cycle | Base Deletion | 26506 | 1.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -52 | Cycle | Base Substitution | 26379 | 45.96 | 29.00 | 30.62 | -1.62 | Before |
| REGRESSION.HCC1395_tumor.L001 | -52 | Cycle | Base Insertion | 26362 | 1.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -52 | Cycle | Base Deletion | 26362 | 3.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -53 | Cycle | Base Substitution | 26404 | 42.79 | 29.00 | 30.34 | -1.34 | Before |
| REGRESSION.HCC1395_tumor.L001 | -53 | Cycle | Base Insertion | 26387 | 1.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -53 | Cycle | Base Deletion | 26387 | 1.86 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -54 | Cycle | Base Substitution | 26329 | 43.33 | 29.00 | 30.97 | -1.97 | Before |
| REGRESSION.HCC1395_tumor.L001 | -54 | Cycle | Base Insertion | 26311 | 0.88 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -54 | Cycle | Base Deletion | 26311 | 2.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -55 | Cycle | Base Substitution | 26470 | 52.60 | 29.00 | 30.53 | -1.53 | Before |
| REGRESSION.HCC1395_tumor.L001 | -55 | Cycle | Base Insertion | 26447 | 0.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -55 | Cycle | Base Deletion | 26447 | 1.91 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -56 | Cycle | Base Substitution | 26226 | 49.60 | 29.00 | 30.82 | -1.82 | Before |
| REGRESSION.HCC1395_tumor.L001 | -56 | Cycle | Base Insertion | 26198 | 0.98 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -56 | Cycle | Base Deletion | 26198 | 1.78 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -57 | Cycle | Base Substitution | 26350 | 38.76 | 29.00 | 30.80 | -1.80 | Before |
| REGRESSION.HCC1395_tumor.L001 | -57 | Cycle | Base Insertion | 26307 | 0.84 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -57 | Cycle | Base Deletion | 26307 | 1.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -58 | Cycle | Base Substitution | 26333 | 28.50 | 30.00 | 30.87 | -0.87 | Before |
| REGRESSION.HCC1395_tumor.L001 | -58 | Cycle | Base Insertion | 26293 | 0.94 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -58 | Cycle | Base Deletion | 26293 | 1.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -59 | Cycle | Base Substitution | 26285 | 45.41 | 29.00 | 30.80 | -1.80 | Before |
| REGRESSION.HCC1395_tumor.L001 | -59 | Cycle | Base Insertion | 26225 | 0.80 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -59 | Cycle | Base Deletion | 26225 | 1.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -6 | Cycle | Base Substitution | 26687 | 44.27 | 30.00 | 31.20 | -1.20 | Before |
| REGRESSION.HCC1395_tumor.L001 | -6 | Cycle | Base Insertion | 26687 | 0.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -6 | Cycle | Base Deletion | 26687 | 0.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -60 | Cycle | Base Substitution | 26250 | 44.40 | 29.00 | 30.88 | -1.88 | Before |
| REGRESSION.HCC1395_tumor.L001 | -60 | Cycle | Base Insertion | 26196 | 0.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -60 | Cycle | Base Deletion | 26196 | 1.09 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -61 | Cycle | Base Substitution | 26104 | 47.74 | 29.00 | 30.66 | -1.66 | Before |
| REGRESSION.HCC1395_tumor.L001 | -61 | Cycle | Base Insertion | 26047 | 1.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -61 | Cycle | Base Deletion | 26047 | 1.75 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -62 | Cycle | Base Substitution | 26329 | 42.12 | 29.00 | 30.72 | -1.72 | Before |
| REGRESSION.HCC1395_tumor.L001 | -62 | Cycle | Base Insertion | 26268 | 0.57 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -62 | Cycle | Base Deletion | 26268 | 1.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -63 | Cycle | Base Substitution | 26182 | 28.00 | 30.00 | 30.99 | -0.99 | Before |
| REGRESSION.HCC1395_tumor.L001 | -63 | Cycle | Base Insertion | 26128 | 0.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -63 | Cycle | Base Deletion | 26128 | 1.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -64 | Cycle | Base Substitution | 26055 | 28.65 | 31.00 | 31.03 | -0.03 | Before |
| REGRESSION.HCC1395_tumor.L001 | -64 | Cycle | Base Insertion | 25991 | 0.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -64 | Cycle | Base Deletion | 25991 | 1.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -65 | Cycle | Base Substitution | 26088 | 42.62 | 29.00 | 30.90 | -1.90 | Before |
| REGRESSION.HCC1395_tumor.L001 | -65 | Cycle | Base Insertion | 26018 | 0.73 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -65 | Cycle | Base Deletion | 26018 | 0.96 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -66 | Cycle | Base Substitution | 26150 | 40.96 | 30.00 | 31.04 | -1.04 | Before |
| REGRESSION.HCC1395_tumor.L001 | -66 | Cycle | Base Insertion | 26065 | 0.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -66 | Cycle | Base Deletion | 26065 | 0.88 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -67 | Cycle | Base Substitution | 26114 | 34.64 | 30.00 | 30.67 | -0.67 | Before |
| REGRESSION.HCC1395_tumor.L001 | -67 | Cycle | Base Insertion | 26027 | 0.52 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -67 | Cycle | Base Deletion | 26027 | 1.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -68 | Cycle | Base Substitution | 26002 | 41.15 | 29.00 | 30.49 | -1.49 | Before |
| REGRESSION.HCC1395_tumor.L001 | -68 | Cycle | Base Insertion | 25912 | 0.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -68 | Cycle | Base Deletion | 25912 | 0.96 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -69 | Cycle | Base Substitution | 26075 | 40.02 | 29.00 | 30.62 | -1.62 | Before |
| REGRESSION.HCC1395_tumor.L001 | -69 | Cycle | Base Insertion | 25985 | 0.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -69 | Cycle | Base Deletion | 25985 | 1.04 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -7 | Cycle | Base Substitution | 26828 | 51.36 | 29.00 | 30.79 | -1.79 | Before |
| REGRESSION.HCC1395_tumor.L001 | -7 | Cycle | Base Insertion | 26828 | 0.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -7 | Cycle | Base Deletion | 26828 | 0.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -70 | Cycle | Base Substitution | 25996 | 30.88 | 30.00 | 30.41 | -0.41 | Before |
| REGRESSION.HCC1395_tumor.L001 | -70 | Cycle | Base Insertion | 25910 | 0.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -70 | Cycle | Base Deletion | 25910 | 0.97 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -71 | Cycle | Base Substitution | 26010 | 46.76 | 29.00 | 30.86 | -1.86 | Before |
| REGRESSION.HCC1395_tumor.L001 | -71 | Cycle | Base Insertion | 25906 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -71 | Cycle | Base Deletion | 25906 | 1.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -72 | Cycle | Base Substitution | 25963 | 38.48 | 29.00 | 30.83 | -1.83 | Before |
| REGRESSION.HCC1395_tumor.L001 | -72 | Cycle | Base Insertion | 25858 | 0.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -72 | Cycle | Base Deletion | 25858 | 1.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -73 | Cycle | Base Substitution | 25909 | 50.05 | 29.00 | 30.54 | -1.54 | Before |
| REGRESSION.HCC1395_tumor.L001 | -73 | Cycle | Base Insertion | 25796 | 0.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -73 | Cycle | Base Deletion | 25796 | 1.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -74 | Cycle | Base Substitution | 25923 | 44.59 | 29.00 | 30.81 | -1.81 | Before |
| REGRESSION.HCC1395_tumor.L001 | -74 | Cycle | Base Insertion | 25803 | 0.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -74 | Cycle | Base Deletion | 25803 | 1.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -75 | Cycle | Base Substitution | 25920 | 51.60 | 29.00 | 30.65 | -1.65 | Before |
| REGRESSION.HCC1395_tumor.L001 | -75 | Cycle | Base Insertion | 25795 | 0.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -75 | Cycle | Base Deletion | 25795 | 1.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -76 | Cycle | Base Substitution | 25829 | 42.39 | 29.00 | 30.74 | -1.74 | Before |
| REGRESSION.HCC1395_tumor.L001 | -76 | Cycle | Base Insertion | 25698 | 0.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -76 | Cycle | Base Deletion | 25698 | 1.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -77 | Cycle | Base Substitution | 25827 | 32.46 | 30.00 | 30.65 | -0.65 | Before |
| REGRESSION.HCC1395_tumor.L001 | -77 | Cycle | Base Insertion | 25691 | 0.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -77 | Cycle | Base Deletion | 25691 | 1.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -78 | Cycle | Base Substitution | 25726 | 38.08 | 29.00 | 30.62 | -1.62 | Before |
| REGRESSION.HCC1395_tumor.L001 | -78 | Cycle | Base Insertion | 25574 | 0.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -78 | Cycle | Base Deletion | 25574 | 1.83 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -79 | Cycle | Base Substitution | 25770 | 37.60 | 29.00 | 30.87 | -1.87 | Before |
| REGRESSION.HCC1395_tumor.L001 | -79 | Cycle | Base Insertion | 25606 | 0.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -79 | Cycle | Base Deletion | 25606 | 2.03 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -8 | Cycle | Base Substitution | 26826 | 43.12 | 30.00 | 31.06 | -1.06 | Before |
| REGRESSION.HCC1395_tumor.L001 | -8 | Cycle | Base Insertion | 26826 | 0.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -8 | Cycle | Base Deletion | 26826 | 0.75 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -80 | Cycle | Base Substitution | 25697 | 35.41 | 30.00 | 30.52 | -0.52 | Before |
| REGRESSION.HCC1395_tumor.L001 | -80 | Cycle | Base Insertion | 25552 | 0.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -80 | Cycle | Base Deletion | 25552 | 2.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -81 | Cycle | Base Substitution | 25637 | 33.72 | 30.00 | 30.74 | -0.74 | Before |
| REGRESSION.HCC1395_tumor.L001 | -81 | Cycle | Base Insertion | 25474 | 0.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -81 | Cycle | Base Deletion | 25474 | 1.82 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -82 | Cycle | Base Substitution | 25665 | 52.34 | 29.00 | 30.56 | -1.56 | Before |
| REGRESSION.HCC1395_tumor.L001 | -82 | Cycle | Base Insertion | 25502 | 0.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -82 | Cycle | Base Deletion | 25502 | 1.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -83 | Cycle | Base Substitution | 25469 | 46.64 | 29.00 | 30.89 | -1.89 | Before |
| REGRESSION.HCC1395_tumor.L001 | -83 | Cycle | Base Insertion | 25301 | 0.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -83 | Cycle | Base Deletion | 25301 | 1.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -84 | Cycle | Base Substitution | 25547 | 41.79 | 29.00 | 30.25 | -1.25 | Before |
| REGRESSION.HCC1395_tumor.L001 | -84 | Cycle | Base Insertion | 25382 | 0.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -84 | Cycle | Base Deletion | 25382 | 1.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -85 | Cycle | Base Substitution | 25476 | 46.34 | 29.00 | 30.32 | -1.32 | Before |
| REGRESSION.HCC1395_tumor.L001 | -85 | Cycle | Base Insertion | 25282 | 0.09 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -85 | Cycle | Base Deletion | 25282 | 0.98 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -86 | Cycle | Base Substitution | 25421 | 48.36 | 29.00 | 30.26 | -1.26 | Before |
| REGRESSION.HCC1395_tumor.L001 | -86 | Cycle | Base Insertion | 25251 | 0.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -86 | Cycle | Base Deletion | 25251 | 0.94 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -87 | Cycle | Base Substitution | 25340 | 49.72 | 29.00 | 30.55 | -1.55 | Before |
| REGRESSION.HCC1395_tumor.L001 | -87 | Cycle | Base Insertion | 25147 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -87 | Cycle | Base Deletion | 25147 | 0.76 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -88 | Cycle | Base Substitution | 25284 | 47.66 | 29.00 | 30.13 | -1.13 | Before |
| REGRESSION.HCC1395_tumor.L001 | -88 | Cycle | Base Insertion | 25109 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -88 | Cycle | Base Deletion | 25109 | 0.90 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -89 | Cycle | Base Substitution | 25353 | 47.53 | 28.00 | 29.96 | -1.96 | Before |
| REGRESSION.HCC1395_tumor.L001 | -89 | Cycle | Base Insertion | 25177 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -89 | Cycle | Base Deletion | 25177 | 0.94 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -9 | Cycle | Base Substitution | 26949 | 38.24 | 30.00 | 31.14 | -1.14 | Before |
| REGRESSION.HCC1395_tumor.L001 | -9 | Cycle | Base Insertion | 26949 | 0.52 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -9 | Cycle | Base Deletion | 26949 | 1.82 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -90 | Cycle | Base Substitution | 25293 | 48.21 | 29.00 | 30.33 | -1.33 | Before |
| REGRESSION.HCC1395_tumor.L001 | -90 | Cycle | Base Insertion | 25094 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -90 | Cycle | Base Deletion | 25094 | 0.97 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -91 | Cycle | Base Substitution | 25186 | 42.66 | 29.00 | 30.08 | -1.08 | Before |
| REGRESSION.HCC1395_tumor.L001 | -91 | Cycle | Base Insertion | 24996 | 0.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -91 | Cycle | Base Deletion | 24996 | 1.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -92 | Cycle | Base Substitution | 25184 | 34.08 | 30.00 | 30.96 | -0.96 | Before |
| REGRESSION.HCC1395_tumor.L001 | -92 | Cycle | Base Insertion | 24974 | 0.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -92 | Cycle | Base Deletion | 24974 | 0.99 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -93 | Cycle | Base Substitution | 25033 | 45.57 | 29.00 | 30.29 | -1.29 | Before |
| REGRESSION.HCC1395_tumor.L001 | -93 | Cycle | Base Insertion | 24820 | 0.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -93 | Cycle | Base Deletion | 24820 | 0.95 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -94 | Cycle | Base Substitution | 25234 | 41.85 | 29.00 | 30.47 | -1.47 | Before |
| REGRESSION.HCC1395_tumor.L001 | -94 | Cycle | Base Insertion | 25010 | 0.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -94 | Cycle | Base Deletion | 25010 | 1.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -95 | Cycle | Base Substitution | 25004 | 40.99 | 29.00 | 30.20 | -1.20 | Before |
| REGRESSION.HCC1395_tumor.L001 | -95 | Cycle | Base Insertion | 24753 | 0.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -95 | Cycle | Base Deletion | 24753 | 0.91 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -96 | Cycle | Base Substitution | 25044 | 50.05 | 29.00 | 30.30 | -1.30 | Before |
| REGRESSION.HCC1395_tumor.L001 | -96 | Cycle | Base Insertion | 24778 | 0.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -96 | Cycle | Base Deletion | 24778 | 0.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -97 | Cycle | Base Substitution | 24935 | 42.10 | 29.00 | 30.43 | -1.43 | Before |
| REGRESSION.HCC1395_tumor.L001 | -97 | Cycle | Base Insertion | 24692 | 0.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -97 | Cycle | Base Deletion | 24692 | 0.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -98 | Cycle | Base Substitution | 24846 | 55.11 | 29.00 | 30.26 | -1.26 | Before |
| REGRESSION.HCC1395_tumor.L001 | -98 | Cycle | Base Insertion | 24619 | 0.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -98 | Cycle | Base Deletion | 24619 | 0.61 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -99 | Cycle | Base Substitution | 24844 | 42.56 | 29.00 | 30.48 | -1.48 | Before |
| REGRESSION.HCC1395_tumor.L001 | -99 | Cycle | Base Insertion | 24615 | 0.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | -99 | Cycle | Base Deletion | 24615 | 1.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 1 | Cycle | Base Substitution | 26567 | 58.08 | 27.00 | 28.73 | -1.73 | Before |
| REGRESSION.HCC1395_tumor.L001 | 10 | Cycle | Base Substitution | 26895 | 32.21 | 30.00 | 31.22 | -1.22 | Before |
| REGRESSION.HCC1395_tumor.L001 | 10 | Cycle | Base Insertion | 26895 | 0.69 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 10 | Cycle | Base Deletion | 26895 | 0.99 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 100 | Cycle | Base Substitution | 24830 | 41.70 | 29.00 | 30.76 | -1.76 | Before |
| REGRESSION.HCC1395_tumor.L001 | 100 | Cycle | Base Insertion | 24592 | 0.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 100 | Cycle | Base Deletion | 24592 | 0.66 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 101 | Cycle | Base Substitution | 24709 | 31.35 | 30.00 | 30.52 | -0.52 | Before |
| REGRESSION.HCC1395_tumor.L001 | 101 | Cycle | Base Insertion | 24451 | 0.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 101 | Cycle | Base Deletion | 24451 | 0.80 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 102 | Cycle | Base Substitution | 24562 | 54.90 | 29.00 | 30.40 | -1.40 | Before |
| REGRESSION.HCC1395_tumor.L001 | 102 | Cycle | Base Insertion | 24297 | 0.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 102 | Cycle | Base Deletion | 24297 | 1.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 103 | Cycle | Base Substitution | 24515 | 35.68 | 29.00 | 30.68 | -1.68 | Before |
| REGRESSION.HCC1395_tumor.L001 | 103 | Cycle | Base Insertion | 24244 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 103 | Cycle | Base Deletion | 24244 | 1.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 104 | Cycle | Base Substitution | 24564 | 32.25 | 30.00 | 30.77 | -0.77 | Before |
| REGRESSION.HCC1395_tumor.L001 | 104 | Cycle | Base Insertion | 24289 | 0.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 104 | Cycle | Base Deletion | 24289 | 1.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 105 | Cycle | Base Substitution | 24462 | 39.11 | 29.00 | 30.47 | -1.47 | Before |
| REGRESSION.HCC1395_tumor.L001 | 105 | Cycle | Base Insertion | 24178 | 0.09 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 105 | Cycle | Base Deletion | 24178 | 0.96 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 106 | Cycle | Base Substitution | 24307 | 49.48 | 29.00 | 30.15 | -1.15 | Before |
| REGRESSION.HCC1395_tumor.L001 | 106 | Cycle | Base Insertion | 24032 | 0.09 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 106 | Cycle | Base Deletion | 24032 | 0.91 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 107 | Cycle | Base Substitution | 24409 | 43.24 | 29.00 | 30.54 | -1.54 | Before |
| REGRESSION.HCC1395_tumor.L001 | 107 | Cycle | Base Insertion | 24144 | 0.09 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 107 | Cycle | Base Deletion | 24144 | 0.69 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 108 | Cycle | Base Substitution | 24267 | 54.89 | 29.00 | 30.11 | -1.11 | Before |
| REGRESSION.HCC1395_tumor.L001 | 108 | Cycle | Base Insertion | 23991 | 0.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 108 | Cycle | Base Deletion | 23991 | 0.98 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 109 | Cycle | Base Substitution | 24185 | 39.72 | 29.00 | 30.17 | -1.17 | Before |
| REGRESSION.HCC1395_tumor.L001 | 109 | Cycle | Base Insertion | 23923 | 0.86 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 109 | Cycle | Base Deletion | 23923 | 0.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 11 | Cycle | Base Substitution | 26812 | 32.57 | 30.00 | 31.07 | -1.07 | Before |
| REGRESSION.HCC1395_tumor.L001 | 11 | Cycle | Base Insertion | 26812 | 0.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 11 | Cycle | Base Deletion | 26812 | 1.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 110 | Cycle | Base Substitution | 24133 | 36.49 | 29.00 | 30.33 | -1.33 | Before |
| REGRESSION.HCC1395_tumor.L001 | 110 | Cycle | Base Insertion | 23850 | 1.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 110 | Cycle | Base Deletion | 23850 | 1.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 111 | Cycle | Base Substitution | 24022 | 39.88 | 29.00 | 30.44 | -1.44 | Before |
| REGRESSION.HCC1395_tumor.L001 | 111 | Cycle | Base Insertion | 23737 | 0.78 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 111 | Cycle | Base Deletion | 23737 | 1.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 112 | Cycle | Base Substitution | 24079 | 50.61 | 29.00 | 30.28 | -1.28 | Before |
| REGRESSION.HCC1395_tumor.L001 | 112 | Cycle | Base Insertion | 23800 | 0.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 112 | Cycle | Base Deletion | 23800 | 0.94 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 113 | Cycle | Base Substitution | 24088 | 43.28 | 29.00 | 30.35 | -1.35 | Before |
| REGRESSION.HCC1395_tumor.L001 | 113 | Cycle | Base Insertion | 23791 | 0.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 113 | Cycle | Base Deletion | 23791 | 0.81 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 114 | Cycle | Base Substitution | 23822 | 50.38 | 29.00 | 30.34 | -1.34 | Before |
| REGRESSION.HCC1395_tumor.L001 | 114 | Cycle | Base Insertion | 23555 | 0.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 114 | Cycle | Base Deletion | 23555 | 1.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 115 | Cycle | Base Substitution | 23904 | 40.32 | 29.00 | 30.19 | -1.19 | Before |
| REGRESSION.HCC1395_tumor.L001 | 115 | Cycle | Base Insertion | 23635 | 0.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 115 | Cycle | Base Deletion | 23635 | 1.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 116 | Cycle | Base Substitution | 23803 | 37.77 | 29.00 | 30.14 | -1.14 | Before |
| REGRESSION.HCC1395_tumor.L001 | 116 | Cycle | Base Insertion | 23516 | 0.57 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 116 | Cycle | Base Deletion | 23516 | 1.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 117 | Cycle | Base Substitution | 23671 | 48.15 | 29.00 | 30.21 | -1.21 | Before |
| REGRESSION.HCC1395_tumor.L001 | 117 | Cycle | Base Insertion | 23387 | 0.76 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 117 | Cycle | Base Deletion | 23387 | 1.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 118 | Cycle | Base Substitution | 23645 | 37.10 | 29.00 | 30.41 | -1.41 | Before |
| REGRESSION.HCC1395_tumor.L001 | 118 | Cycle | Base Insertion | 23354 | 0.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 118 | Cycle | Base Deletion | 23354 | 1.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 119 | Cycle | Base Substitution | 23584 | 38.32 | 29.00 | 30.09 | -1.09 | Before |
| REGRESSION.HCC1395_tumor.L001 | 119 | Cycle | Base Insertion | 23285 | 0.95 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 119 | Cycle | Base Deletion | 23285 | 1.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 12 | Cycle | Base Substitution | 26832 | 30.18 | 31.00 | 31.04 | -0.04 | Before |
| REGRESSION.HCC1395_tumor.L001 | 12 | Cycle | Base Insertion | 26832 | 0.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 12 | Cycle | Base Deletion | 26832 | 1.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 120 | Cycle | Base Substitution | 23571 | 41.45 | 29.00 | 29.86 | -0.86 | Before |
| REGRESSION.HCC1395_tumor.L001 | 120 | Cycle | Base Insertion | 23282 | 0.77 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 120 | Cycle | Base Deletion | 23282 | 1.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 121 | Cycle | Base Substitution | 23454 | 46.71 | 28.00 | 30.00 | -2.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 121 | Cycle | Base Insertion | 23191 | 0.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 121 | Cycle | Base Deletion | 23191 | 0.86 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 122 | Cycle | Base Substitution | 23393 | 48.63 | 28.00 | 29.90 | -1.90 | Before |
| REGRESSION.HCC1395_tumor.L001 | 122 | Cycle | Base Insertion | 23116 | 0.57 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 122 | Cycle | Base Deletion | 23116 | 0.99 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 123 | Cycle | Base Substitution | 23386 | 27.55 | 30.00 | 30.20 | -0.20 | Before |
| REGRESSION.HCC1395_tumor.L001 | 123 | Cycle | Base Insertion | 23091 | 0.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 123 | Cycle | Base Deletion | 23091 | 1.12 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 124 | Cycle | Base Substitution | 23349 | 34.65 | 29.00 | 30.19 | -1.19 | Before |
| REGRESSION.HCC1395_tumor.L001 | 124 | Cycle | Base Insertion | 23038 | 0.21 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 124 | Cycle | Base Deletion | 23038 | 1.02 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 125 | Cycle | Base Substitution | 23232 | 44.87 | 28.00 | 29.85 | -1.85 | Before |
| REGRESSION.HCC1395_tumor.L001 | 125 | Cycle | Base Insertion | 22924 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 125 | Cycle | Base Deletion | 22924 | 1.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 126 | Cycle | Base Substitution | 23078 | 41.14 | 29.00 | 30.21 | -1.21 | Before |
| REGRESSION.HCC1395_tumor.L001 | 126 | Cycle | Base Insertion | 22768 | 0.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 126 | Cycle | Base Deletion | 22768 | 0.69 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 127 | Cycle | Base Substitution | 23120 | 35.93 | 29.00 | 29.96 | -0.96 | Before |
| REGRESSION.HCC1395_tumor.L001 | 127 | Cycle | Base Insertion | 22818 | 0.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 127 | Cycle | Base Deletion | 22818 | 0.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 128 | Cycle | Base Substitution | 23015 | 45.86 | 29.00 | 30.10 | -1.10 | Before |
| REGRESSION.HCC1395_tumor.L001 | 128 | Cycle | Base Insertion | 22699 | 0.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 128 | Cycle | Base Deletion | 22699 | 0.77 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 129 | Cycle | Base Substitution | 22994 | 38.07 | 29.00 | 29.99 | -0.99 | Before |
| REGRESSION.HCC1395_tumor.L001 | 129 | Cycle | Base Insertion | 22700 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 129 | Cycle | Base Deletion | 22700 | 1.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 13 | Cycle | Base Substitution | 26799 | 28.90 | 31.00 | 31.55 | -0.55 | Before |
| REGRESSION.HCC1395_tumor.L001 | 13 | Cycle | Base Insertion | 26799 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 13 | Cycle | Base Deletion | 26799 | 1.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 130 | Cycle | Base Substitution | 22784 | 47.10 | 29.00 | 30.29 | -1.29 | Before |
| REGRESSION.HCC1395_tumor.L001 | 130 | Cycle | Base Insertion | 22473 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 130 | Cycle | Base Deletion | 22473 | 1.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 131 | Cycle | Base Substitution | 22700 | 43.90 | 29.00 | 30.59 | -1.59 | Before |
| REGRESSION.HCC1395_tumor.L001 | 131 | Cycle | Base Insertion | 22372 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 131 | Cycle | Base Deletion | 22372 | 1.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 132 | Cycle | Base Substitution | 22659 | 42.44 | 29.00 | 30.09 | -1.09 | Before |
| REGRESSION.HCC1395_tumor.L001 | 132 | Cycle | Base Insertion | 22326 | 0.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 132 | Cycle | Base Deletion | 22326 | 1.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 133 | Cycle | Base Substitution | 22636 | 39.90 | 29.00 | 30.11 | -1.11 | Before |
| REGRESSION.HCC1395_tumor.L001 | 133 | Cycle | Base Insertion | 22319 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 133 | Cycle | Base Deletion | 22319 | 1.03 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 134 | Cycle | Base Substitution | 22540 | 43.25 | 28.00 | 29.86 | -1.86 | Before |
| REGRESSION.HCC1395_tumor.L001 | 134 | Cycle | Base Insertion | 22218 | 0.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 134 | Cycle | Base Deletion | 22218 | 0.87 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 135 | Cycle | Base Substitution | 22447 | 44.00 | 29.00 | 30.26 | -1.26 | Before |
| REGRESSION.HCC1395_tumor.L001 | 135 | Cycle | Base Insertion | 22125 | 0.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 135 | Cycle | Base Deletion | 22125 | 0.81 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 136 | Cycle | Base Substitution | 22306 | 27.31 | 30.00 | 30.37 | -0.37 | Before |
| REGRESSION.HCC1395_tumor.L001 | 136 | Cycle | Base Insertion | 21988 | 0.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 136 | Cycle | Base Deletion | 21988 | 0.84 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 137 | Cycle | Base Substitution | 22371 | 44.64 | 28.00 | 29.75 | -1.75 | Before |
| REGRESSION.HCC1395_tumor.L001 | 137 | Cycle | Base Insertion | 22052 | 0.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 137 | Cycle | Base Deletion | 22052 | 0.86 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 138 | Cycle | Base Substitution | 22231 | 45.44 | 29.00 | 30.25 | -1.25 | Before |
| REGRESSION.HCC1395_tumor.L001 | 138 | Cycle | Base Insertion | 21877 | 0.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 138 | Cycle | Base Deletion | 21877 | 0.66 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 139 | Cycle | Base Substitution | 22137 | 49.19 | 29.00 | 30.03 | -1.03 | Before |
| REGRESSION.HCC1395_tumor.L001 | 139 | Cycle | Base Insertion | 21796 | 0.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 139 | Cycle | Base Deletion | 21796 | 0.90 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 14 | Cycle | Base Substitution | 26821 | 29.54 | 31.00 | 31.20 | -0.20 | Before |
| REGRESSION.HCC1395_tumor.L001 | 14 | Cycle | Base Insertion | 26821 | 0.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 14 | Cycle | Base Deletion | 26821 | 1.66 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 140 | Cycle | Base Substitution | 22053 | 46.92 | 28.00 | 29.77 | -1.77 | Before |
| REGRESSION.HCC1395_tumor.L001 | 140 | Cycle | Base Insertion | 21701 | 0.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 140 | Cycle | Base Deletion | 21701 | 0.90 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 141 | Cycle | Base Substitution | 22115 | 27.65 | 29.00 | 29.86 | -0.86 | Before |
| REGRESSION.HCC1395_tumor.L001 | 141 | Cycle | Base Insertion | 21762 | 0.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 141 | Cycle | Base Deletion | 21762 | 0.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 142 | Cycle | Base Substitution | 21830 | 45.34 | 28.00 | 29.61 | -1.61 | Before |
| REGRESSION.HCC1395_tumor.L001 | 142 | Cycle | Base Insertion | 21474 | 0.12 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 142 | Cycle | Base Deletion | 21474 | 0.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 143 | Cycle | Base Substitution | 21881 | 54.15 | 28.00 | 29.63 | -1.63 | Before |
| REGRESSION.HCC1395_tumor.L001 | 143 | Cycle | Base Insertion | 21525 | 0.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 143 | Cycle | Base Deletion | 21525 | 0.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 144 | Cycle | Base Substitution | 21788 | 38.95 | 28.00 | 29.82 | -1.82 | Before |
| REGRESSION.HCC1395_tumor.L001 | 144 | Cycle | Base Insertion | 21449 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 144 | Cycle | Base Deletion | 21449 | 0.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 145 | Cycle | Base Substitution | 21636 | 39.92 | 28.00 | 29.86 | -1.86 | Before |
| REGRESSION.HCC1395_tumor.L001 | 145 | Cycle | Base Insertion | 21294 | 0.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 145 | Cycle | Base Deletion | 21294 | 0.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 146 | Cycle | Base Substitution | 21632 | 40.07 | 28.00 | 29.76 | -1.76 | Before |
| REGRESSION.HCC1395_tumor.L001 | 146 | Cycle | Base Insertion | 21317 | 0.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 146 | Cycle | Base Deletion | 21317 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 147 | Cycle | Base Substitution | 21489 | 41.80 | 28.00 | 29.74 | -1.74 | Before |
| REGRESSION.HCC1395_tumor.L001 | 148 | Cycle | Base Substitution | 21452 | 44.14 | 29.00 | 30.05 | -1.05 | Before |
| REGRESSION.HCC1395_tumor.L001 | 149 | Cycle | Base Substitution | 21377 | 38.09 | 28.00 | 29.67 | -1.67 | Before |
| REGRESSION.HCC1395_tumor.L001 | 15 | Cycle | Base Substitution | 26822 | 29.21 | 31.00 | 31.64 | -0.64 | Before |
| REGRESSION.HCC1395_tumor.L001 | 15 | Cycle | Base Insertion | 26822 | 0.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 15 | Cycle | Base Deletion | 26822 | 0.98 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 150 | Cycle | Base Substitution | 21230 | 36.13 | 29.00 | 29.94 | -0.94 | Before |
| REGRESSION.HCC1395_tumor.L001 | 16 | Cycle | Base Substitution | 26685 | 23.88 | 32.00 | 32.86 | -0.86 | Before |
| REGRESSION.HCC1395_tumor.L001 | 16 | Cycle | Base Insertion | 26685 | 0.88 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 16 | Cycle | Base Deletion | 26685 | 1.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 17 | Cycle | Base Substitution | 26554 | 23.27 | 32.00 | 32.87 | -0.87 | Before |
| REGRESSION.HCC1395_tumor.L001 | 17 | Cycle | Base Insertion | 26554 | 0.84 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 17 | Cycle | Base Deletion | 26554 | 1.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 18 | Cycle | Base Substitution | 26685 | 28.33 | 32.00 | 33.01 | -1.01 | Before |
| REGRESSION.HCC1395_tumor.L001 | 18 | Cycle | Base Insertion | 26685 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 18 | Cycle | Base Deletion | 26685 | 1.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 19 | Cycle | Base Substitution | 26776 | 21.14 | 32.00 | 32.73 | -0.73 | Before |
| REGRESSION.HCC1395_tumor.L001 | 19 | Cycle | Base Insertion | 26776 | 0.57 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 19 | Cycle | Base Deletion | 26776 | 1.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 2 | Cycle | Base Substitution | 26911 | 49.07 | 29.00 | 30.28 | -1.28 | Before |
| REGRESSION.HCC1395_tumor.L001 | 20 | Cycle | Base Substitution | 26669 | 24.77 | 32.00 | 33.00 | -1.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 20 | Cycle | Base Insertion | 26669 | 0.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 20 | Cycle | Base Deletion | 26669 | 1.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 21 | Cycle | Base Substitution | 26699 | 28.03 | 31.00 | 32.89 | -1.89 | Before |
| REGRESSION.HCC1395_tumor.L001 | 21 | Cycle | Base Insertion | 26699 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 21 | Cycle | Base Deletion | 26699 | 1.85 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 22 | Cycle | Base Substitution | 26671 | 20.40 | 32.00 | 32.99 | -0.99 | Before |
| REGRESSION.HCC1395_tumor.L001 | 22 | Cycle | Base Insertion | 26671 | 1.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 22 | Cycle | Base Deletion | 26671 | 1.92 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 23 | Cycle | Base Substitution | 26697 | 19.07 | 32.00 | 32.89 | -0.89 | Before |
| REGRESSION.HCC1395_tumor.L001 | 23 | Cycle | Base Insertion | 26697 | 0.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 23 | Cycle | Base Deletion | 26697 | 2.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 24 | Cycle | Base Substitution | 26684 | 19.24 | 33.00 | 33.02 | -0.02 | Before |
| REGRESSION.HCC1395_tumor.L001 | 24 | Cycle | Base Insertion | 26684 | 0.67 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 24 | Cycle | Base Deletion | 26684 | 1.93 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 25 | Cycle | Base Substitution | 26654 | 18.58 | 33.00 | 33.25 | -0.25 | Before |
| REGRESSION.HCC1395_tumor.L001 | 25 | Cycle | Base Insertion | 26654 | 0.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 25 | Cycle | Base Deletion | 26654 | 1.97 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 26 | Cycle | Base Substitution | 26742 | 33.62 | 30.00 | 31.36 | -1.36 | Before |
| REGRESSION.HCC1395_tumor.L001 | 26 | Cycle | Base Insertion | 26742 | 0.87 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 26 | Cycle | Base Deletion | 26742 | 1.88 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 27 | Cycle | Base Substitution | 26648 | 29.34 | 31.00 | 31.67 | -0.67 | Before |
| REGRESSION.HCC1395_tumor.L001 | 27 | Cycle | Base Insertion | 26648 | 0.79 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 27 | Cycle | Base Deletion | 26648 | 1.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 28 | Cycle | Base Substitution | 26695 | 34.43 | 30.00 | 31.44 | -1.44 | Before |
| REGRESSION.HCC1395_tumor.L001 | 28 | Cycle | Base Insertion | 26695 | 0.62 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 28 | Cycle | Base Deletion | 26695 | 1.85 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 29 | Cycle | Base Substitution | 26666 | 28.77 | 31.00 | 31.95 | -0.95 | Before |
| REGRESSION.HCC1395_tumor.L001 | 29 | Cycle | Base Insertion | 26666 | 0.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 29 | Cycle | Base Deletion | 26666 | 2.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 3 | Cycle | Base Substitution | 26915 | 47.91 | 30.00 | 31.19 | -1.19 | Before |
| REGRESSION.HCC1395_tumor.L001 | 30 | Cycle | Base Substitution | 26669 | 31.57 | 30.00 | 31.52 | -1.52 | Before |
| REGRESSION.HCC1395_tumor.L001 | 30 | Cycle | Base Insertion | 26669 | 0.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 30 | Cycle | Base Deletion | 26669 | 2.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 31 | Cycle | Base Substitution | 26586 | 27.53 | 31.00 | 31.90 | -0.90 | Before |
| REGRESSION.HCC1395_tumor.L001 | 31 | Cycle | Base Insertion | 26586 | 0.77 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 31 | Cycle | Base Deletion | 26586 | 2.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 32 | Cycle | Base Substitution | 26614 | 39.61 | 30.00 | 31.01 | -1.01 | Before |
| REGRESSION.HCC1395_tumor.L001 | 32 | Cycle | Base Insertion | 26613 | 0.60 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 32 | Cycle | Base Deletion | 26613 | 1.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 33 | Cycle | Base Substitution | 26413 | 39.01 | 30.00 | 31.34 | -1.34 | Before |
| REGRESSION.HCC1395_tumor.L001 | 33 | Cycle | Base Insertion | 26412 | 0.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 33 | Cycle | Base Deletion | 26412 | 1.65 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 34 | Cycle | Base Substitution | 26623 | 32.03 | 30.00 | 31.51 | -1.51 | Before |
| REGRESSION.HCC1395_tumor.L001 | 34 | Cycle | Base Insertion | 26622 | 0.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 34 | Cycle | Base Deletion | 26622 | 1.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 35 | Cycle | Base Substitution | 26557 | 37.50 | 30.00 | 31.41 | -1.41 | Before |
| REGRESSION.HCC1395_tumor.L001 | 35 | Cycle | Base Insertion | 26555 | 0.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 35 | Cycle | Base Deletion | 26555 | 1.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 36 | Cycle | Base Substitution | 26621 | 34.74 | 30.00 | 31.27 | -1.27 | Before |
| REGRESSION.HCC1395_tumor.L001 | 36 | Cycle | Base Insertion | 26619 | 0.52 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 36 | Cycle | Base Deletion | 26619 | 1.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 37 | Cycle | Base Substitution | 26529 | 27.52 | 31.00 | 31.84 | -0.84 | Before |
| REGRESSION.HCC1395_tumor.L001 | 37 | Cycle | Base Insertion | 26527 | 0.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 37 | Cycle | Base Deletion | 26527 | 1.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 38 | Cycle | Base Substitution | 26617 | 36.85 | 30.00 | 31.79 | -1.79 | Before |
| REGRESSION.HCC1395_tumor.L001 | 38 | Cycle | Base Insertion | 26614 | 0.60 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 38 | Cycle | Base Deletion | 26614 | 1.52 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 39 | Cycle | Base Substitution | 26574 | 19.11 | 31.00 | 31.38 | -0.38 | Before |
| REGRESSION.HCC1395_tumor.L001 | 39 | Cycle | Base Insertion | 26573 | 0.76 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 39 | Cycle | Base Deletion | 26573 | 1.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 4 | Cycle | Base Substitution | 26869 | 69.78 | 28.00 | 30.96 | -2.96 | Before |
| REGRESSION.HCC1395_tumor.L001 | 40 | Cycle | Base Substitution | 26650 | 30.43 | 31.00 | 31.45 | -0.45 | Before |
| REGRESSION.HCC1395_tumor.L001 | 40 | Cycle | Base Insertion | 26649 | 0.93 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 40 | Cycle | Base Deletion | 26649 | 1.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 41 | Cycle | Base Substitution | 26619 | 35.76 | 30.00 | 31.25 | -1.25 | Before |
| REGRESSION.HCC1395_tumor.L001 | 41 | Cycle | Base Insertion | 26617 | 1.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 41 | Cycle | Base Deletion | 26617 | 1.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 42 | Cycle | Base Substitution | 26495 | 37.16 | 30.00 | 31.61 | -1.61 | Before |
| REGRESSION.HCC1395_tumor.L001 | 42 | Cycle | Base Insertion | 26493 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 42 | Cycle | Base Deletion | 26493 | 1.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 43 | Cycle | Base Substitution | 26491 | 27.65 | 31.00 | 31.47 | -0.47 | Before |
| REGRESSION.HCC1395_tumor.L001 | 43 | Cycle | Base Insertion | 26485 | 0.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 43 | Cycle | Base Deletion | 26485 | 1.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 44 | Cycle | Base Substitution | 26600 | 20.26 | 31.00 | 31.57 | -0.57 | Before |
| REGRESSION.HCC1395_tumor.L001 | 44 | Cycle | Base Insertion | 26591 | 0.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 44 | Cycle | Base Deletion | 26591 | 1.73 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 45 | Cycle | Base Substitution | 26395 | 28.43 | 31.00 | 31.55 | -0.55 | Before |
| REGRESSION.HCC1395_tumor.L001 | 45 | Cycle | Base Insertion | 26387 | 0.62 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 45 | Cycle | Base Deletion | 26387 | 1.57 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 46 | Cycle | Base Substitution | 26454 | 26.08 | 31.00 | 31.65 | -0.65 | Before |
| REGRESSION.HCC1395_tumor.L001 | 46 | Cycle | Base Insertion | 26445 | 0.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 46 | Cycle | Base Deletion | 26445 | 1.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 47 | Cycle | Base Substitution | 26424 | 35.08 | 30.00 | 31.27 | -1.27 | Before |
| REGRESSION.HCC1395_tumor.L001 | 47 | Cycle | Base Insertion | 26418 | 0.89 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 47 | Cycle | Base Deletion | 26418 | 2.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 48 | Cycle | Base Substitution | 26481 | 33.34 | 30.00 | 31.07 | -1.07 | Before |
| REGRESSION.HCC1395_tumor.L001 | 48 | Cycle | Base Insertion | 26470 | 0.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 48 | Cycle | Base Deletion | 26470 | 1.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 49 | Cycle | Base Substitution | 26519 | 28.79 | 31.00 | 31.35 | -0.35 | Before |
| REGRESSION.HCC1395_tumor.L001 | 49 | Cycle | Base Insertion | 26505 | 0.81 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 49 | Cycle | Base Deletion | 26505 | 0.95 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 5 | Cycle | Base Substitution | 26875 | 37.96 | 30.00 | 31.22 | -1.22 | Before |
| REGRESSION.HCC1395_tumor.L001 | 5 | Cycle | Base Insertion | 26875 | 0.75 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 5 | Cycle | Base Deletion | 26875 | 0.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 50 | Cycle | Base Substitution | 26385 | 35.30 | 30.00 | 31.45 | -1.45 | Before |
| REGRESSION.HCC1395_tumor.L001 | 50 | Cycle | Base Insertion | 26363 | 0.76 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 50 | Cycle | Base Deletion | 26363 | 0.99 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 51 | Cycle | Base Substitution | 26386 | 37.65 | 30.00 | 31.29 | -1.29 | Before |
| REGRESSION.HCC1395_tumor.L001 | 51 | Cycle | Base Insertion | 26366 | 0.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 51 | Cycle | Base Deletion | 26366 | 1.21 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 52 | Cycle | Base Substitution | 26379 | 33.85 | 30.00 | 31.56 | -1.56 | Before |
| REGRESSION.HCC1395_tumor.L001 | 52 | Cycle | Base Insertion | 26361 | 0.52 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 52 | Cycle | Base Deletion | 26361 | 1.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 53 | Cycle | Base Substitution | 26458 | 38.99 | 30.00 | 31.30 | -1.30 | Before |
| REGRESSION.HCC1395_tumor.L001 | 53 | Cycle | Base Insertion | 26437 | 0.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 53 | Cycle | Base Deletion | 26437 | 1.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 54 | Cycle | Base Substitution | 26367 | 33.70 | 30.00 | 31.19 | -1.19 | Before |
| REGRESSION.HCC1395_tumor.L001 | 54 | Cycle | Base Insertion | 26345 | 0.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 54 | Cycle | Base Deletion | 26345 | 1.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 55 | Cycle | Base Substitution | 26383 | 29.69 | 31.00 | 31.68 | -0.68 | Before |
| REGRESSION.HCC1395_tumor.L001 | 55 | Cycle | Base Insertion | 26359 | 0.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 55 | Cycle | Base Deletion | 26359 | 1.65 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 56 | Cycle | Base Substitution | 26332 | 32.02 | 30.00 | 31.27 | -1.27 | Before |
| REGRESSION.HCC1395_tumor.L001 | 56 | Cycle | Base Insertion | 26297 | 0.03 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 56 | Cycle | Base Deletion | 26297 | 1.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 57 | Cycle | Base Substitution | 26394 | 49.39 | 30.00 | 31.13 | -1.13 | Before |
| REGRESSION.HCC1395_tumor.L001 | 57 | Cycle | Base Insertion | 26355 | 0.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 57 | Cycle | Base Deletion | 26355 | 1.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 58 | Cycle | Base Substitution | 26315 | 36.30 | 30.00 | 31.38 | -1.38 | Before |
| REGRESSION.HCC1395_tumor.L001 | 58 | Cycle | Base Insertion | 26272 | 1.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 58 | Cycle | Base Deletion | 26272 | 1.66 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 59 | Cycle | Base Substitution | 26334 | 26.50 | 31.00 | 31.29 | -0.29 | Before |
| REGRESSION.HCC1395_tumor.L001 | 59 | Cycle | Base Insertion | 26276 | 0.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 59 | Cycle | Base Deletion | 26276 | 1.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 6 | Cycle | Base Substitution | 26815 | 41.21 | 30.00 | 31.17 | -1.17 | Before |
| REGRESSION.HCC1395_tumor.L001 | 6 | Cycle | Base Insertion | 26815 | 0.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 6 | Cycle | Base Deletion | 26815 | 0.12 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 60 | Cycle | Base Substitution | 26307 | 37.54 | 30.00 | 31.32 | -1.32 | Before |
| REGRESSION.HCC1395_tumor.L001 | 60 | Cycle | Base Insertion | 26252 | 0.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 60 | Cycle | Base Deletion | 26252 | 2.03 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 61 | Cycle | Base Substitution | 26305 | 35.16 | 30.00 | 31.34 | -1.34 | Before |
| REGRESSION.HCC1395_tumor.L001 | 61 | Cycle | Base Insertion | 26249 | 0.21 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 61 | Cycle | Base Deletion | 26249 | 2.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 62 | Cycle | Base Substitution | 26332 | 34.81 | 30.00 | 31.43 | -1.43 | Before |
| REGRESSION.HCC1395_tumor.L001 | 62 | Cycle | Base Insertion | 26276 | 0.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 62 | Cycle | Base Deletion | 26276 | 2.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 63 | Cycle | Base Substitution | 26225 | 45.64 | 30.00 | 31.57 | -1.57 | Before |
| REGRESSION.HCC1395_tumor.L001 | 63 | Cycle | Base Insertion | 26165 | 0.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 63 | Cycle | Base Deletion | 26165 | 1.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 64 | Cycle | Base Substitution | 26294 | 32.78 | 30.00 | 31.24 | -1.24 | Before |
| REGRESSION.HCC1395_tumor.L001 | 64 | Cycle | Base Insertion | 26223 | 0.97 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 64 | Cycle | Base Deletion | 26223 | 1.99 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 65 | Cycle | Base Substitution | 26137 | 40.30 | 30.00 | 31.27 | -1.27 | Before |
| REGRESSION.HCC1395_tumor.L001 | 65 | Cycle | Base Insertion | 26067 | 1.09 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 65 | Cycle | Base Deletion | 26067 | 2.07 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 66 | Cycle | Base Substitution | 26075 | 35.84 | 30.00 | 31.25 | -1.25 | Before |
| REGRESSION.HCC1395_tumor.L001 | 66 | Cycle | Base Insertion | 25990 | 0.69 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 66 | Cycle | Base Deletion | 25990 | 2.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 67 | Cycle | Base Substitution | 26217 | 39.14 | 30.00 | 31.47 | -1.47 | Before |
| REGRESSION.HCC1395_tumor.L001 | 67 | Cycle | Base Insertion | 26129 | 0.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 67 | Cycle | Base Deletion | 26129 | 1.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 68 | Cycle | Base Substitution | 26172 | 40.12 | 30.00 | 31.44 | -1.44 | Before |
| REGRESSION.HCC1395_tumor.L001 | 68 | Cycle | Base Insertion | 26079 | 0.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 68 | Cycle | Base Deletion | 26079 | 1.75 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 69 | Cycle | Base Substitution | 26054 | 35.38 | 30.00 | 31.27 | -1.27 | Before |
| REGRESSION.HCC1395_tumor.L001 | 69 | Cycle | Base Insertion | 25954 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 69 | Cycle | Base Deletion | 25954 | 2.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 7 | Cycle | Base Substitution | 26871 | 29.58 | 31.00 | 31.08 | -0.08 | Before |
| REGRESSION.HCC1395_tumor.L001 | 7 | Cycle | Base Insertion | 26871 | 0.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 7 | Cycle | Base Deletion | 26871 | 0.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 70 | Cycle | Base Substitution | 26097 | 33.35 | 30.00 | 31.75 | -1.75 | Before |
| REGRESSION.HCC1395_tumor.L001 | 70 | Cycle | Base Insertion | 26003 | 0.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 70 | Cycle | Base Deletion | 26003 | 1.67 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 71 | Cycle | Base Substitution | 25961 | 33.03 | 30.00 | 31.28 | -1.28 | Before |
| REGRESSION.HCC1395_tumor.L001 | 71 | Cycle | Base Insertion | 25858 | 1.12 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 71 | Cycle | Base Deletion | 25858 | 1.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 72 | Cycle | Base Substitution | 25887 | 36.50 | 30.00 | 31.59 | -1.59 | Before |
| REGRESSION.HCC1395_tumor.L001 | 72 | Cycle | Base Insertion | 25783 | 0.92 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 72 | Cycle | Base Deletion | 25783 | 1.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 73 | Cycle | Base Substitution | 25982 | 44.05 | 29.00 | 30.85 | -1.85 | Before |
| REGRESSION.HCC1395_tumor.L001 | 73 | Cycle | Base Insertion | 25861 | 0.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 73 | Cycle | Base Deletion | 25861 | 1.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 74 | Cycle | Base Substitution | 25920 | 41.76 | 30.00 | 31.35 | -1.35 | Before |
| REGRESSION.HCC1395_tumor.L001 | 74 | Cycle | Base Insertion | 25802 | 0.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 74 | Cycle | Base Deletion | 25802 | 1.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 75 | Cycle | Base Substitution | 25908 | 41.28 | 30.00 | 31.01 | -1.01 | Before |
| REGRESSION.HCC1395_tumor.L001 | 75 | Cycle | Base Insertion | 25781 | 0.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 75 | Cycle | Base Deletion | 25781 | 1.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 76 | Cycle | Base Substitution | 25961 | 33.45 | 30.00 | 30.97 | -0.97 | Before |
| REGRESSION.HCC1395_tumor.L001 | 76 | Cycle | Base Insertion | 25823 | 0.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 76 | Cycle | Base Deletion | 25823 | 1.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 77 | Cycle | Base Substitution | 25849 | 40.73 | 29.00 | 30.91 | -1.91 | Before |
| REGRESSION.HCC1395_tumor.L001 | 77 | Cycle | Base Insertion | 25715 | 0.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 77 | Cycle | Base Deletion | 25715 | 1.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 78 | Cycle | Base Substitution | 25690 | 37.17 | 29.00 | 30.92 | -1.92 | Before |
| REGRESSION.HCC1395_tumor.L001 | 78 | Cycle | Base Insertion | 25535 | 0.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 78 | Cycle | Base Deletion | 25535 | 1.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 79 | Cycle | Base Substitution | 25658 | 42.90 | 29.00 | 30.92 | -1.92 | Before |
| REGRESSION.HCC1395_tumor.L001 | 79 | Cycle | Base Insertion | 25490 | 0.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 79 | Cycle | Base Deletion | 25490 | 1.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 8 | Cycle | Base Substitution | 26860 | 30.58 | 31.00 | 31.53 | -0.53 | Before |
| REGRESSION.HCC1395_tumor.L001 | 8 | Cycle | Base Insertion | 26860 | 0.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 8 | Cycle | Base Deletion | 26860 | 0.74 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 80 | Cycle | Base Substitution | 25710 | 28.67 | 31.00 | 31.20 | -0.20 | Before |
| REGRESSION.HCC1395_tumor.L001 | 80 | Cycle | Base Insertion | 25546 | 0.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 80 | Cycle | Base Deletion | 25546 | 1.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 81 | Cycle | Base Substitution | 25625 | 39.65 | 29.00 | 30.91 | -1.91 | Before |
| REGRESSION.HCC1395_tumor.L001 | 81 | Cycle | Base Insertion | 25456 | 0.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 81 | Cycle | Base Deletion | 25456 | 1.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 82 | Cycle | Base Substitution | 25608 | 38.12 | 29.00 | 30.93 | -1.93 | Before |
| REGRESSION.HCC1395_tumor.L001 | 82 | Cycle | Base Insertion | 25433 | 0.66 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 82 | Cycle | Base Deletion | 25433 | 1.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 83 | Cycle | Base Substitution | 25626 | 46.78 | 29.00 | 30.73 | -1.73 | Before |
| REGRESSION.HCC1395_tumor.L001 | 83 | Cycle | Base Insertion | 25460 | 0.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 83 | Cycle | Base Deletion | 25460 | 1.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 84 | Cycle | Base Substitution | 25513 | 32.16 | 30.00 | 30.92 | -0.92 | Before |
| REGRESSION.HCC1395_tumor.L001 | 84 | Cycle | Base Insertion | 25324 | 0.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 84 | Cycle | Base Deletion | 25324 | 1.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 85 | Cycle | Base Substitution | 25530 | 30.64 | 30.00 | 31.15 | -1.15 | Before |
| REGRESSION.HCC1395_tumor.L001 | 85 | Cycle | Base Insertion | 25330 | 0.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 85 | Cycle | Base Deletion | 25330 | 1.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 86 | Cycle | Base Substitution | 25359 | 41.06 | 29.00 | 30.52 | -1.52 | Before |
| REGRESSION.HCC1395_tumor.L001 | 86 | Cycle | Base Insertion | 25185 | 0.83 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 86 | Cycle | Base Deletion | 25185 | 1.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 87 | Cycle | Base Substitution | 25360 | 39.92 | 29.00 | 30.90 | -1.90 | Before |
| REGRESSION.HCC1395_tumor.L001 | 87 | Cycle | Base Insertion | 25182 | 0.83 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 87 | Cycle | Base Deletion | 25182 | 1.61 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 88 | Cycle | Base Substitution | 25330 | 41.10 | 29.00 | 30.54 | -1.54 | Before |
| REGRESSION.HCC1395_tumor.L001 | 88 | Cycle | Base Insertion | 25152 | 0.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 88 | Cycle | Base Deletion | 25152 | 1.75 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 89 | Cycle | Base Substitution | 25359 | 40.80 | 29.00 | 30.74 | -1.74 | Before |
| REGRESSION.HCC1395_tumor.L001 | 89 | Cycle | Base Insertion | 25183 | 0.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 89 | Cycle | Base Deletion | 25183 | 1.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 9 | Cycle | Base Substitution | 26878 | 30.83 | 31.00 | 31.11 | -0.11 | Before |
| REGRESSION.HCC1395_tumor.L001 | 9 | Cycle | Base Insertion | 26878 | 0.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 9 | Cycle | Base Deletion | 26878 | 0.78 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 90 | Cycle | Base Substitution | 25365 | 44.67 | 29.00 | 30.50 | -1.50 | Before |
| REGRESSION.HCC1395_tumor.L001 | 90 | Cycle | Base Insertion | 25164 | 0.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 90 | Cycle | Base Deletion | 25164 | 1.67 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 91 | Cycle | Base Substitution | 25303 | 40.19 | 29.00 | 30.45 | -1.45 | Before |
| REGRESSION.HCC1395_tumor.L001 | 91 | Cycle | Base Insertion | 25115 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 91 | Cycle | Base Deletion | 25115 | 1.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 92 | Cycle | Base Substitution | 25306 | 41.88 | 29.00 | 30.56 | -1.56 | Before |
| REGRESSION.HCC1395_tumor.L001 | 92 | Cycle | Base Insertion | 25093 | 0.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 92 | Cycle | Base Deletion | 25093 | 1.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 93 | Cycle | Base Substitution | 25112 | 38.60 | 29.00 | 30.72 | -1.72 | Before |
| REGRESSION.HCC1395_tumor.L001 | 93 | Cycle | Base Insertion | 24884 | 1.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 93 | Cycle | Base Deletion | 24884 | 0.62 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 94 | Cycle | Base Substitution | 25140 | 43.72 | 29.00 | 30.34 | -1.34 | Before |
| REGRESSION.HCC1395_tumor.L001 | 94 | Cycle | Base Insertion | 24914 | 0.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 94 | Cycle | Base Deletion | 24914 | 0.83 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 95 | Cycle | Base Substitution | 25076 | 37.90 | 29.00 | 30.42 | -1.42 | Before |
| REGRESSION.HCC1395_tumor.L001 | 95 | Cycle | Base Insertion | 24828 | 0.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 95 | Cycle | Base Deletion | 24828 | 0.85 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 96 | Cycle | Base Substitution | 25024 | 47.96 | 29.00 | 30.78 | -1.78 | Before |
| REGRESSION.HCC1395_tumor.L001 | 96 | Cycle | Base Insertion | 24768 | 0.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 96 | Cycle | Base Deletion | 24768 | 0.67 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 97 | Cycle | Base Substitution | 24989 | 46.15 | 29.00 | 30.45 | -1.45 | Before |
| REGRESSION.HCC1395_tumor.L001 | 97 | Cycle | Base Insertion | 24743 | 0.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 97 | Cycle | Base Deletion | 24743 | 0.95 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 98 | Cycle | Base Substitution | 24782 | 43.90 | 29.00 | 30.39 | -1.39 | Before |
| REGRESSION.HCC1395_tumor.L001 | 98 | Cycle | Base Insertion | 24545 | 0.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 98 | Cycle | Base Deletion | 24545 | 1.04 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 99 | Cycle | Base Substitution | 24756 | 43.55 | 29.00 | 30.69 | -1.69 | Before |
| REGRESSION.HCC1395_tumor.L001 | 99 | Cycle | Base Insertion | 24532 | 1.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 99 | Cycle | Base Deletion | 24532 | 1.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 12 | QualityScore | Base Substitution | 78597 | 7460.89 | 10.00 | 12.00 | -2.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 24 | QualityScore | Base Substitution | 192590 | 792.67 | 24.00 | 24.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 40 | QualityScore | Base Substitution | 7255785 | 5386.41 | 31.00 | 40.00 | -9.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 45 | QualityScore | Base Insertion | 7526972 | 144.51 | 46.00 | 45.00 | 1.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | 45 | QualityScore | Base Deletion | 7526972 | 351.92 | 44.00 | 45.00 | -1.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | AA | Context | Base Substitution | 538655 | 1440.23 | 26.00 | 29.47 | -3.47 | Before |
| REGRESSION.HCC1395_tumor.L002 | AAA | Context | Base Insertion | 183242 | 30.44 | 44.00 | 45.00 | -1.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | AAA | Context | Base Deletion | 183242 | 80.88 | 41.00 | 45.00 | -4.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | AAC | Context | Base Insertion | 87768 | 0.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | AAC | Context | Base Deletion | 87768 | 1.90 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | AAG | Context | Base Insertion | 137572 | 3.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | AAG | Context | Base Deletion | 137572 | 3.87 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | AAT | Context | Base Insertion | 104567 | 0.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | AAT | Context | Base Deletion | 104567 | 1.74 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | AC | Context | Base Substitution | 364113 | 1226.84 | 25.00 | 28.67 | -3.67 | Before |
| REGRESSION.HCC1395_tumor.L002 | ACA | Context | Base Insertion | 134957 | 5.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | ACA | Context | Base Deletion | 134957 | 7.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | ACC | Context | Base Insertion | 106698 | 3.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | ACC | Context | Base Deletion | 106698 | 1.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | ACG | Context | Base Insertion | 21114 | 0.04 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | ACG | Context | Base Deletion | 21114 | 2.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | ACT | Context | Base Insertion | 107299 | 0.90 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | ACT | Context | Base Deletion | 107299 | 5.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | AG | Context | Base Substitution | 574302 | 569.29 | 30.00 | 31.71 | -1.71 | Before |
| REGRESSION.HCC1395_tumor.L002 | AGA | Context | Base Insertion | 156387 | 1.82 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | AGA | Context | Base Deletion | 156387 | 3.73 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | AGC | Context | Base Insertion | 142542 | 0.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | AGC | Context | Base Deletion | 142542 | 4.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | AGG | Context | Base Insertion | 166928 | 6.97 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | AGG | Context | Base Deletion | 166928 | 3.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | AGT | Context | Base Insertion | 104720 | 1.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | AGT | Context | Base Deletion | 104720 | 3.80 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | AT | Context | Base Substitution | 380329 | 515.97 | 29.00 | 32.01 | -3.01 | Before |
| REGRESSION.HCC1395_tumor.L002 | ATA | Context | Base Insertion | 77089 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | ATA | Context | Base Deletion | 77089 | 0.94 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | ATC | Context | Base Insertion | 81425 | 0.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | ATC | Context | Base Deletion | 81425 | 1.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | ATG | Context | Base Insertion | 117542 | 0.77 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | ATG | Context | Base Deletion | 117542 | 0.97 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | ATT | Context | Base Insertion | 111406 | 1.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | ATT | Context | Base Deletion | 111406 | 2.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | CA | Context | Base Substitution | 607426 | 1363.81 | 27.00 | 29.82 | -2.82 | Before |
| REGRESSION.HCC1395_tumor.L002 | CAA | Context | Base Insertion | 115307 | 2.12 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | CAA | Context | Base Deletion | 115307 | 3.79 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | CAC | Context | Base Insertion | 127947 | 7.66 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | CAC | Context | Base Deletion | 127947 | 8.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | CAG | Context | Base Insertion | 217371 | 5.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | CAG | Context | Base Deletion | 217371 | 9.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | CAT | Context | Base Insertion | 114070 | 0.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | CAT | Context | Base Deletion | 114070 | 2.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | CC | Context | Base Substitution | 561377 | 1742.52 | 25.00 | 28.95 | -3.95 | Before |
| REGRESSION.HCC1395_tumor.L002 | CCA | Context | Base Insertion | 180334 | 2.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | CCA | Context | Base Deletion | 180334 | 2.90 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | CCC | Context | Base Insertion | 153781 | 8.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | CCC | Context | Base Deletion | 153781 | 8.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | CCG | Context | Base Insertion | 37820 | 1.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | CCG | Context | Base Deletion | 37820 | 0.81 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | CCT | Context | Base Insertion | 181180 | 0.77 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | CCT | Context | Base Deletion | 181180 | 5.74 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | CG | Context | Base Substitution | 115049 | 358.98 | 26.00 | 29.69 | -3.69 | Before |
| REGRESSION.HCC1395_tumor.L002 | CGA | Context | Base Insertion | 45228 | 2.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | CGA | Context | Base Deletion | 45228 | 0.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | CGC | Context | Base Insertion | 64546 | 1.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | CGC | Context | Base Deletion | 64546 | 3.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | CGG | Context | Base Insertion | 77753 | 1.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | CGG | Context | Base Deletion | 77753 | 3.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | CGT | Context | Base Insertion | 50027 | 0.09 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | CGT | Context | Base Deletion | 50027 | 0.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | CT | Context | Base Substitution | 608620 | 464.40 | 31.00 | 32.34 | -1.34 | Before |
| REGRESSION.HCC1395_tumor.L002 | CTA | Context | Base Insertion | 59591 | 0.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | CTA | Context | Base Deletion | 59591 | 4.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | CTC | Context | Base Insertion | 149209 | 0.78 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | CTC | Context | Base Deletion | 149209 | 7.67 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | CTG | Context | Base Insertion | 217730 | 0.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | CTG | Context | Base Deletion | 217730 | 7.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | CTT | Context | Base Insertion | 149431 | 3.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | CTT | Context | Base Deletion | 149431 | 4.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | GA | Context | Base Substitution | 507390 | 875.21 | 28.00 | 29.48 | -1.48 | Before |
| REGRESSION.HCC1395_tumor.L002 | GAA | Context | Base Insertion | 145234 | 2.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | GAA | Context | Base Deletion | 145234 | 2.69 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | GAC | Context | Base Insertion | 84943 | 1.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | GAC | Context | Base Deletion | 84943 | 0.82 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | GAG | Context | Base Insertion | 153833 | 0.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | GAG | Context | Base Deletion | 153833 | 2.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | GAT | Context | Base Insertion | 85816 | 0.99 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | GAT | Context | Base Deletion | 85816 | 1.79 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | GC | Context | Base Substitution | 496886 | 1200.84 | 26.00 | 30.12 | -4.12 | Before |
| REGRESSION.HCC1395_tumor.L002 | GCA | Context | Base Insertion | 152220 | 1.95 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | GCA | Context | Base Deletion | 152220 | 2.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | GCC | Context | Base Insertion | 149289 | 1.81 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | GCC | Context | Base Deletion | 149289 | 6.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | GCG | Context | Base Insertion | 36296 | 0.87 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | GCG | Context | Base Deletion | 36296 | 1.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | GCT | Context | Base Insertion | 158865 | 2.09 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | GCT | Context | Base Deletion | 158865 | 1.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | GG | Context | Base Substitution | 586212 | 767.30 | 29.00 | 31.66 | -2.66 | Before |
| REGRESSION.HCC1395_tumor.L002 | GGA | Context | Base Insertion | 159470 | 3.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | GGA | Context | Base Deletion | 159470 | 5.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | GGC | Context | Base Insertion | 147316 | 0.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | GGC | Context | Base Deletion | 147316 | 3.75 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | GGG | Context | Base Insertion | 159853 | 1.75 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | GGG | Context | Base Deletion | 159853 | 7.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | GGT | Context | Base Insertion | 117316 | 0.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | GGT | Context | Base Deletion | 117316 | 1.04 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | GT | Context | Base Substitution | 415809 | 726.51 | 28.00 | 31.98 | -3.98 | Before |
| REGRESSION.HCC1395_tumor.L002 | GTA | Context | Base Insertion | 67582 | 0.88 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | GTA | Context | Base Deletion | 67582 | 0.91 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | GTC | Context | Base Insertion | 92411 | 1.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | GTC | Context | Base Deletion | 92411 | 0.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | GTG | Context | Base Insertion | 142500 | 0.83 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | GTG | Context | Base Deletion | 142500 | 8.96 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | GTT | Context | Base Insertion | 101858 | 0.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | GTT | Context | Base Deletion | 101858 | 1.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | TA | Context | Base Substitution | 295628 | 841.97 | 26.00 | 29.50 | -3.50 | Before |
| REGRESSION.HCC1395_tumor.L002 | TAA | Context | Base Insertion | 90111 | 2.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | TAA | Context | Base Deletion | 90111 | 4.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | TAC | Context | Base Insertion | 61035 | 0.09 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | TAC | Context | Base Deletion | 61035 | 4.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | TAG | Context | Base Insertion | 61057 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | TAG | Context | Base Deletion | 61057 | 0.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | TAT | Context | Base Insertion | 73059 | 0.07 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | TAT | Context | Base Deletion | 73059 | 0.21 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | TC | Context | Base Substitution | 458218 | 1112.13 | 26.00 | 30.43 | -4.43 | Before |
| REGRESSION.HCC1395_tumor.L002 | TCA | Context | Base Insertion | 135108 | 2.84 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | TCA | Context | Base Deletion | 135108 | 4.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | TCC | Context | Base Insertion | 147919 | 1.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | TCC | Context | Base Deletion | 147919 | 3.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | TCG | Context | Base Insertion | 18929 | 0.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | TCG | Context | Base Deletion | 18929 | 0.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | TCT | Context | Base Insertion | 157117 | 1.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | TCT | Context | Base Deletion | 157117 | 6.80 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | TG | Context | Base Substitution | 599371 | 468.67 | 31.00 | 31.71 | -0.71 | Before |
| REGRESSION.HCC1395_tumor.L002 | TGA | Context | Base Insertion | 142495 | 0.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | TGA | Context | Base Deletion | 142495 | 1.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | TGC | Context | Base Insertion | 139253 | 2.62 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | TGC | Context | Base Deletion | 139253 | 0.97 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | TGG | Context | Base Insertion | 177397 | 0.66 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | TGG | Context | Base Deletion | 177397 | 4.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | TGT | Context | Base Insertion | 140967 | 0.79 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | TGT | Context | Base Deletion | 140967 | 9.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | TT | Context | Base Substitution | 550791 | 695.25 | 29.00 | 32.86 | -3.86 | Before |
| REGRESSION.HCC1395_tumor.L002 | TTA | Context | Base Insertion | 89113 | 3.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | TTA | Context | Base Deletion | 89113 | 3.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | TTC | Context | Base Insertion | 132344 | 1.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | TTC | Context | Base Deletion | 132344 | 5.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | TTG | Context | Base Insertion | 117317 | 0.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | TTG | Context | Base Deletion | 117317 | 2.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | TTT | Context | Base Insertion | 184289 | 22.94 | 44.00 | 45.00 | -1.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | TTT | Context | Base Deletion | 184289 | 55.79 | 42.00 | 45.00 | -3.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -1 | Cycle | Base Substitution | 27370 | 105.07 | 24.00 | 25.88 | -1.88 | Before |
| REGRESSION.HCC1395_tumor.L002 | -10 | Cycle | Base Substitution | 27505 | 39.72 | 30.00 | 31.30 | -1.30 | Before |
| REGRESSION.HCC1395_tumor.L002 | -10 | Cycle | Base Insertion | 27505 | 0.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -10 | Cycle | Base Deletion | 27505 | 1.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -100 | Cycle | Base Substitution | 25407 | 56.12 | 29.00 | 30.03 | -1.03 | Before |
| REGRESSION.HCC1395_tumor.L002 | -100 | Cycle | Base Insertion | 25150 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -100 | Cycle | Base Deletion | 25150 | 0.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -101 | Cycle | Base Substitution | 25368 | 43.03 | 29.00 | 30.04 | -1.04 | Before |
| REGRESSION.HCC1395_tumor.L002 | -101 | Cycle | Base Insertion | 25085 | 0.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -101 | Cycle | Base Deletion | 25085 | 0.65 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -102 | Cycle | Base Substitution | 25279 | 57.73 | 29.00 | 30.16 | -1.16 | Before |
| REGRESSION.HCC1395_tumor.L002 | -102 | Cycle | Base Insertion | 25015 | 0.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -102 | Cycle | Base Deletion | 25015 | 0.65 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -103 | Cycle | Base Substitution | 25225 | 49.82 | 29.00 | 30.19 | -1.19 | Before |
| REGRESSION.HCC1395_tumor.L002 | -103 | Cycle | Base Insertion | 24937 | 0.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -103 | Cycle | Base Deletion | 24937 | 0.69 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -104 | Cycle | Base Substitution | 25326 | 49.61 | 29.00 | 30.08 | -1.08 | Before |
| REGRESSION.HCC1395_tumor.L002 | -104 | Cycle | Base Insertion | 25030 | 0.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -104 | Cycle | Base Deletion | 25030 | 1.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -105 | Cycle | Base Substitution | 25182 | 39.89 | 29.00 | 30.18 | -1.18 | Before |
| REGRESSION.HCC1395_tumor.L002 | -105 | Cycle | Base Insertion | 24923 | 0.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -105 | Cycle | Base Deletion | 24923 | 1.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -106 | Cycle | Base Substitution | 25033 | 49.12 | 28.00 | 29.87 | -1.87 | Before |
| REGRESSION.HCC1395_tumor.L002 | -106 | Cycle | Base Insertion | 24781 | 0.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -106 | Cycle | Base Deletion | 24781 | 1.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -107 | Cycle | Base Substitution | 25004 | 45.91 | 28.00 | 29.90 | -1.90 | Before |
| REGRESSION.HCC1395_tumor.L002 | -107 | Cycle | Base Insertion | 24754 | 0.09 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -107 | Cycle | Base Deletion | 24754 | 1.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -108 | Cycle | Base Substitution | 24898 | 63.65 | 28.00 | 29.91 | -1.91 | Before |
| REGRESSION.HCC1395_tumor.L002 | -108 | Cycle | Base Insertion | 24654 | 0.12 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -108 | Cycle | Base Deletion | 24654 | 1.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -109 | Cycle | Base Substitution | 24829 | 34.15 | 30.00 | 30.26 | -0.26 | Before |
| REGRESSION.HCC1395_tumor.L002 | -109 | Cycle | Base Insertion | 24566 | 0.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -109 | Cycle | Base Deletion | 24566 | 1.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -11 | Cycle | Base Substitution | 27472 | 30.38 | 31.00 | 31.22 | -0.22 | Before |
| REGRESSION.HCC1395_tumor.L002 | -11 | Cycle | Base Insertion | 27472 | 0.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -11 | Cycle | Base Deletion | 27472 | 1.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -110 | Cycle | Base Substitution | 24839 | 57.58 | 28.00 | 29.61 | -1.61 | Before |
| REGRESSION.HCC1395_tumor.L002 | -110 | Cycle | Base Insertion | 24555 | 0.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -110 | Cycle | Base Deletion | 24555 | 1.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -111 | Cycle | Base Substitution | 24807 | 50.91 | 29.00 | 30.42 | -1.42 | Before |
| REGRESSION.HCC1395_tumor.L002 | -111 | Cycle | Base Insertion | 24542 | 1.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -111 | Cycle | Base Deletion | 24542 | 1.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -112 | Cycle | Base Substitution | 24684 | 58.30 | 28.00 | 30.00 | -2.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -112 | Cycle | Base Insertion | 24410 | 0.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -112 | Cycle | Base Deletion | 24410 | 1.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -113 | Cycle | Base Substitution | 24678 | 53.81 | 29.00 | 30.00 | -1.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -113 | Cycle | Base Insertion | 24428 | 0.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -113 | Cycle | Base Deletion | 24428 | 1.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -114 | Cycle | Base Substitution | 24564 | 50.37 | 28.00 | 29.91 | -1.91 | Before |
| REGRESSION.HCC1395_tumor.L002 | -114 | Cycle | Base Insertion | 24313 | 0.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -114 | Cycle | Base Deletion | 24313 | 1.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -115 | Cycle | Base Substitution | 24477 | 44.70 | 29.00 | 30.18 | -1.18 | Before |
| REGRESSION.HCC1395_tumor.L002 | -115 | Cycle | Base Insertion | 24216 | 0.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -115 | Cycle | Base Deletion | 24216 | 1.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -116 | Cycle | Base Substitution | 24579 | 49.24 | 29.00 | 30.06 | -1.06 | Before |
| REGRESSION.HCC1395_tumor.L002 | -116 | Cycle | Base Insertion | 24288 | 0.85 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -116 | Cycle | Base Deletion | 24288 | 1.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -117 | Cycle | Base Substitution | 24326 | 46.64 | 29.00 | 30.03 | -1.03 | Before |
| REGRESSION.HCC1395_tumor.L002 | -117 | Cycle | Base Insertion | 24020 | 0.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -117 | Cycle | Base Deletion | 24020 | 1.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -118 | Cycle | Base Substitution | 24319 | 47.35 | 28.00 | 29.93 | -1.93 | Before |
| REGRESSION.HCC1395_tumor.L002 | -118 | Cycle | Base Insertion | 24021 | 0.21 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -118 | Cycle | Base Deletion | 24021 | 0.93 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -119 | Cycle | Base Substitution | 24217 | 59.27 | 28.00 | 29.79 | -1.79 | Before |
| REGRESSION.HCC1395_tumor.L002 | -119 | Cycle | Base Insertion | 23904 | 0.21 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -119 | Cycle | Base Deletion | 23904 | 0.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -12 | Cycle | Base Substitution | 27592 | 36.41 | 30.00 | 31.29 | -1.29 | Before |
| REGRESSION.HCC1395_tumor.L002 | -12 | Cycle | Base Insertion | 27592 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -12 | Cycle | Base Deletion | 27592 | 2.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -120 | Cycle | Base Substitution | 24162 | 56.32 | 28.00 | 29.65 | -1.65 | Before |
| REGRESSION.HCC1395_tumor.L002 | -120 | Cycle | Base Insertion | 23887 | 0.21 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -120 | Cycle | Base Deletion | 23887 | 1.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -121 | Cycle | Base Substitution | 24127 | 52.06 | 28.00 | 29.94 | -1.94 | Before |
| REGRESSION.HCC1395_tumor.L002 | -121 | Cycle | Base Insertion | 23851 | 0.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -121 | Cycle | Base Deletion | 23851 | 1.60 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -122 | Cycle | Base Substitution | 24146 | 45.25 | 28.00 | 29.86 | -1.86 | Before |
| REGRESSION.HCC1395_tumor.L002 | -122 | Cycle | Base Insertion | 23843 | 0.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -122 | Cycle | Base Deletion | 23843 | 1.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -123 | Cycle | Base Substitution | 24084 | 47.86 | 28.00 | 29.86 | -1.86 | Before |
| REGRESSION.HCC1395_tumor.L002 | -123 | Cycle | Base Insertion | 23781 | 0.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -123 | Cycle | Base Deletion | 23781 | 1.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -124 | Cycle | Base Substitution | 23928 | 44.61 | 28.00 | 29.72 | -1.72 | Before |
| REGRESSION.HCC1395_tumor.L002 | -124 | Cycle | Base Insertion | 23641 | 0.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -124 | Cycle | Base Deletion | 23641 | 1.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -125 | Cycle | Base Substitution | 23843 | 44.74 | 28.00 | 29.64 | -1.64 | Before |
| REGRESSION.HCC1395_tumor.L002 | -125 | Cycle | Base Insertion | 23524 | 0.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -125 | Cycle | Base Deletion | 23524 | 1.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -126 | Cycle | Base Substitution | 23838 | 59.28 | 28.00 | 29.77 | -1.77 | Before |
| REGRESSION.HCC1395_tumor.L002 | -126 | Cycle | Base Insertion | 23527 | 0.65 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -126 | Cycle | Base Deletion | 23527 | 1.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -127 | Cycle | Base Substitution | 23626 | 59.44 | 28.00 | 29.68 | -1.68 | Before |
| REGRESSION.HCC1395_tumor.L002 | -127 | Cycle | Base Insertion | 23326 | 0.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -127 | Cycle | Base Deletion | 23326 | 1.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -128 | Cycle | Base Substitution | 23639 | 41.44 | 29.00 | 30.12 | -1.12 | Before |
| REGRESSION.HCC1395_tumor.L002 | -128 | Cycle | Base Insertion | 23318 | 0.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -128 | Cycle | Base Deletion | 23318 | 1.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -129 | Cycle | Base Substitution | 23544 | 45.71 | 28.00 | 29.81 | -1.81 | Before |
| REGRESSION.HCC1395_tumor.L002 | -129 | Cycle | Base Insertion | 23235 | 0.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -129 | Cycle | Base Deletion | 23235 | 1.61 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -13 | Cycle | Base Substitution | 27550 | 38.26 | 31.00 | 32.11 | -1.11 | Before |
| REGRESSION.HCC1395_tumor.L002 | -13 | Cycle | Base Insertion | 27550 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -13 | Cycle | Base Deletion | 27550 | 1.61 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -130 | Cycle | Base Substitution | 23520 | 42.60 | 28.00 | 29.61 | -1.61 | Before |
| REGRESSION.HCC1395_tumor.L002 | -130 | Cycle | Base Insertion | 23218 | 0.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -130 | Cycle | Base Deletion | 23218 | 1.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -131 | Cycle | Base Substitution | 23467 | 44.20 | 28.00 | 29.69 | -1.69 | Before |
| REGRESSION.HCC1395_tumor.L002 | -131 | Cycle | Base Insertion | 23156 | 0.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -131 | Cycle | Base Deletion | 23156 | 0.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -132 | Cycle | Base Substitution | 23431 | 54.71 | 28.00 | 29.34 | -1.34 | Before |
| REGRESSION.HCC1395_tumor.L002 | -132 | Cycle | Base Insertion | 23109 | 0.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -132 | Cycle | Base Deletion | 23109 | 0.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -133 | Cycle | Base Substitution | 23263 | 45.52 | 28.00 | 29.58 | -1.58 | Before |
| REGRESSION.HCC1395_tumor.L002 | -133 | Cycle | Base Insertion | 22937 | 0.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -133 | Cycle | Base Deletion | 22937 | 0.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -134 | Cycle | Base Substitution | 23250 | 46.19 | 28.00 | 29.58 | -1.58 | Before |
| REGRESSION.HCC1395_tumor.L002 | -134 | Cycle | Base Insertion | 22913 | 0.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -134 | Cycle | Base Deletion | 22913 | 0.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -135 | Cycle | Base Substitution | 23146 | 57.41 | 28.00 | 29.84 | -1.84 | Before |
| REGRESSION.HCC1395_tumor.L002 | -135 | Cycle | Base Insertion | 22812 | 0.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -135 | Cycle | Base Deletion | 22812 | 0.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -136 | Cycle | Base Substitution | 23031 | 37.98 | 29.00 | 29.81 | -0.81 | Before |
| REGRESSION.HCC1395_tumor.L002 | -136 | Cycle | Base Insertion | 22680 | 0.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -136 | Cycle | Base Deletion | 22680 | 0.60 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -137 | Cycle | Base Substitution | 23018 | 42.67 | 29.00 | 30.10 | -1.10 | Before |
| REGRESSION.HCC1395_tumor.L002 | -137 | Cycle | Base Insertion | 22665 | 0.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -137 | Cycle | Base Deletion | 22665 | 0.60 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -138 | Cycle | Base Substitution | 22913 | 57.96 | 28.00 | 29.53 | -1.53 | Before |
| REGRESSION.HCC1395_tumor.L002 | -138 | Cycle | Base Insertion | 22553 | 0.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -138 | Cycle | Base Deletion | 22553 | 0.77 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -139 | Cycle | Base Substitution | 22865 | 48.82 | 28.00 | 29.38 | -1.38 | Before |
| REGRESSION.HCC1395_tumor.L002 | -139 | Cycle | Base Insertion | 22479 | 0.60 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -139 | Cycle | Base Deletion | 22479 | 0.60 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -14 | Cycle | Base Substitution | 27534 | 39.41 | 30.00 | 31.41 | -1.41 | Before |
| REGRESSION.HCC1395_tumor.L002 | -14 | Cycle | Base Insertion | 27534 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -14 | Cycle | Base Deletion | 27534 | 2.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -140 | Cycle | Base Substitution | 22758 | 59.00 | 28.00 | 29.78 | -1.78 | Before |
| REGRESSION.HCC1395_tumor.L002 | -140 | Cycle | Base Insertion | 22356 | 0.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -140 | Cycle | Base Deletion | 22356 | 0.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -141 | Cycle | Base Substitution | 22823 | 46.17 | 28.00 | 29.57 | -1.57 | Before |
| REGRESSION.HCC1395_tumor.L002 | -141 | Cycle | Base Insertion | 22378 | 0.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -141 | Cycle | Base Deletion | 22378 | 0.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -142 | Cycle | Base Substitution | 22693 | 43.77 | 28.00 | 29.93 | -1.93 | Before |
| REGRESSION.HCC1395_tumor.L002 | -142 | Cycle | Base Insertion | 22199 | 0.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -142 | Cycle | Base Deletion | 22199 | 0.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -143 | Cycle | Base Substitution | 22490 | 31.15 | 29.00 | 29.97 | -0.97 | Before |
| REGRESSION.HCC1395_tumor.L002 | -143 | Cycle | Base Insertion | 21977 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -143 | Cycle | Base Deletion | 21977 | 0.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -144 | Cycle | Base Substitution | 22441 | 28.70 | 29.00 | 29.83 | -0.83 | Before |
| REGRESSION.HCC1395_tumor.L002 | -144 | Cycle | Base Insertion | 21920 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -144 | Cycle | Base Deletion | 21920 | 0.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -145 | Cycle | Base Substitution | 22368 | 45.42 | 28.00 | 29.84 | -1.84 | Before |
| REGRESSION.HCC1395_tumor.L002 | -145 | Cycle | Base Insertion | 17121 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -145 | Cycle | Base Deletion | 17121 | 0.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -146 | Cycle | Base Substitution | 22142 | 74.74 | 27.00 | 29.94 | -2.94 | Before |
| REGRESSION.HCC1395_tumor.L002 | -146 | Cycle | Base Insertion | 17028 | 1.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -146 | Cycle | Base Deletion | 17028 | 0.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -147 | Cycle | Base Substitution | 22067 | 253.28 | 22.00 | 30.06 | -8.06 | Before |
| REGRESSION.HCC1395_tumor.L002 | -148 | Cycle | Base Substitution | 21868 | 892.47 | 15.00 | 30.01 | -15.01 | Before |
| REGRESSION.HCC1395_tumor.L002 | -149 | Cycle | Base Substitution | 13507 | 805.97 | 14.00 | 30.78 | -16.78 | Before |
| REGRESSION.HCC1395_tumor.L002 | -15 | Cycle | Base Substitution | 27527 | 47.94 | 30.00 | 31.61 | -1.61 | Before |
| REGRESSION.HCC1395_tumor.L002 | -15 | Cycle | Base Insertion | 27527 | 0.65 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -15 | Cycle | Base Deletion | 27527 | 2.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -150 | Cycle | Base Substitution | 4772 | 8.16 | 30.00 | 30.52 | -0.52 | Before |
| REGRESSION.HCC1395_tumor.L002 | -16 | Cycle | Base Substitution | 27576 | 37.64 | 30.00 | 31.36 | -1.36 | Before |
| REGRESSION.HCC1395_tumor.L002 | -16 | Cycle | Base Insertion | 27576 | 0.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -16 | Cycle | Base Deletion | 27576 | 2.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -17 | Cycle | Base Substitution | 27561 | 49.36 | 30.00 | 31.50 | -1.50 | Before |
| REGRESSION.HCC1395_tumor.L002 | -17 | Cycle | Base Insertion | 27561 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -17 | Cycle | Base Deletion | 27561 | 1.92 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -18 | Cycle | Base Substitution | 27452 | 55.53 | 29.00 | 31.29 | -2.29 | Before |
| REGRESSION.HCC1395_tumor.L002 | -18 | Cycle | Base Insertion | 27452 | 1.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -18 | Cycle | Base Deletion | 27452 | 1.98 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -19 | Cycle | Base Substitution | 27506 | 38.60 | 30.00 | 31.64 | -1.64 | Before |
| REGRESSION.HCC1395_tumor.L002 | -19 | Cycle | Base Insertion | 27506 | 0.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -19 | Cycle | Base Deletion | 27506 | 1.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -2 | Cycle | Base Substitution | 27717 | 78.87 | 27.00 | 28.36 | -1.36 | Before |
| REGRESSION.HCC1395_tumor.L002 | -20 | Cycle | Base Substitution | 27482 | 37.87 | 30.00 | 31.55 | -1.55 | Before |
| REGRESSION.HCC1395_tumor.L002 | -20 | Cycle | Base Insertion | 27482 | 0.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -20 | Cycle | Base Deletion | 27482 | 1.66 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -21 | Cycle | Base Substitution | 27432 | 45.17 | 30.00 | 31.97 | -1.97 | Before |
| REGRESSION.HCC1395_tumor.L002 | -21 | Cycle | Base Insertion | 27432 | 0.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -21 | Cycle | Base Deletion | 27432 | 1.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -22 | Cycle | Base Substitution | 27388 | 35.73 | 30.00 | 31.54 | -1.54 | Before |
| REGRESSION.HCC1395_tumor.L002 | -22 | Cycle | Base Insertion | 27388 | 0.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -22 | Cycle | Base Deletion | 27388 | 1.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -23 | Cycle | Base Substitution | 27492 | 33.87 | 30.00 | 31.48 | -1.48 | Before |
| REGRESSION.HCC1395_tumor.L002 | -23 | Cycle | Base Insertion | 27492 | 0.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -23 | Cycle | Base Deletion | 27492 | 1.52 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -24 | Cycle | Base Substitution | 27468 | 37.97 | 30.00 | 31.68 | -1.68 | Before |
| REGRESSION.HCC1395_tumor.L002 | -24 | Cycle | Base Insertion | 27468 | 0.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -24 | Cycle | Base Deletion | 27468 | 1.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -25 | Cycle | Base Substitution | 27444 | 36.93 | 30.00 | 31.45 | -1.45 | Before |
| REGRESSION.HCC1395_tumor.L002 | -25 | Cycle | Base Insertion | 27444 | 0.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -25 | Cycle | Base Deletion | 27444 | 1.98 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -26 | Cycle | Base Substitution | 27434 | 37.64 | 30.00 | 30.12 | -0.12 | Before |
| REGRESSION.HCC1395_tumor.L002 | -26 | Cycle | Base Insertion | 27434 | 0.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -26 | Cycle | Base Deletion | 27434 | 2.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -27 | Cycle | Base Substitution | 27422 | 30.05 | 30.00 | 30.61 | -0.61 | Before |
| REGRESSION.HCC1395_tumor.L002 | -27 | Cycle | Base Insertion | 27421 | 0.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -27 | Cycle | Base Deletion | 27421 | 1.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -28 | Cycle | Base Substitution | 27424 | 44.76 | 29.00 | 29.94 | -0.94 | Before |
| REGRESSION.HCC1395_tumor.L002 | -28 | Cycle | Base Insertion | 27423 | 0.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -28 | Cycle | Base Deletion | 27423 | 1.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -29 | Cycle | Base Substitution | 27470 | 41.27 | 29.00 | 30.20 | -1.20 | Before |
| REGRESSION.HCC1395_tumor.L002 | -29 | Cycle | Base Insertion | 27468 | 0.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -29 | Cycle | Base Deletion | 27468 | 1.92 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -3 | Cycle | Base Substitution | 27733 | 75.95 | 27.00 | 29.65 | -2.65 | Before |
| REGRESSION.HCC1395_tumor.L002 | -30 | Cycle | Base Substitution | 27430 | 39.60 | 29.00 | 30.02 | -1.02 | Before |
| REGRESSION.HCC1395_tumor.L002 | -30 | Cycle | Base Insertion | 27428 | 0.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -30 | Cycle | Base Deletion | 27428 | 1.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -31 | Cycle | Base Substitution | 27305 | 46.31 | 29.00 | 30.02 | -1.02 | Before |
| REGRESSION.HCC1395_tumor.L002 | -31 | Cycle | Base Insertion | 27304 | 1.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -31 | Cycle | Base Deletion | 27304 | 1.67 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -32 | Cycle | Base Substitution | 27410 | 37.93 | 30.00 | 30.40 | -0.40 | Before |
| REGRESSION.HCC1395_tumor.L002 | -32 | Cycle | Base Insertion | 27409 | 0.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -32 | Cycle | Base Deletion | 27409 | 1.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -33 | Cycle | Base Substitution | 27325 | 44.50 | 29.00 | 30.15 | -1.15 | Before |
| REGRESSION.HCC1395_tumor.L002 | -33 | Cycle | Base Insertion | 27325 | 0.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -33 | Cycle | Base Deletion | 27325 | 1.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -34 | Cycle | Base Substitution | 27346 | 42.54 | 29.00 | 30.32 | -1.32 | Before |
| REGRESSION.HCC1395_tumor.L002 | -34 | Cycle | Base Insertion | 27345 | 0.61 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -34 | Cycle | Base Deletion | 27345 | 0.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -35 | Cycle | Base Substitution | 27327 | 46.74 | 29.00 | 30.47 | -1.47 | Before |
| REGRESSION.HCC1395_tumor.L002 | -35 | Cycle | Base Insertion | 27325 | 0.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -35 | Cycle | Base Deletion | 27325 | 0.79 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -36 | Cycle | Base Substitution | 27291 | 37.47 | 30.00 | 30.22 | -0.22 | Before |
| REGRESSION.HCC1395_tumor.L002 | -36 | Cycle | Base Insertion | 27290 | 0.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -36 | Cycle | Base Deletion | 27290 | 1.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -37 | Cycle | Base Substitution | 27294 | 38.45 | 30.00 | 30.16 | -0.16 | Before |
| REGRESSION.HCC1395_tumor.L002 | -37 | Cycle | Base Insertion | 27291 | 0.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -37 | Cycle | Base Deletion | 27291 | 1.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -38 | Cycle | Base Substitution | 27265 | 38.91 | 29.00 | 30.26 | -1.26 | Before |
| REGRESSION.HCC1395_tumor.L002 | -38 | Cycle | Base Insertion | 27262 | 0.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -38 | Cycle | Base Deletion | 27262 | 1.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -39 | Cycle | Base Substitution | 27309 | 52.45 | 29.00 | 30.21 | -1.21 | Before |
| REGRESSION.HCC1395_tumor.L002 | -39 | Cycle | Base Insertion | 27306 | 0.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -39 | Cycle | Base Deletion | 27306 | 1.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -4 | Cycle | Base Substitution | 27669 | 78.88 | 27.00 | 29.81 | -2.81 | Before |
| REGRESSION.HCC1395_tumor.L002 | -40 | Cycle | Base Substitution | 27322 | 39.65 | 29.00 | 30.38 | -1.38 | Before |
| REGRESSION.HCC1395_tumor.L002 | -40 | Cycle | Base Insertion | 27320 | 0.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -40 | Cycle | Base Deletion | 27320 | 1.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -41 | Cycle | Base Substitution | 27239 | 37.17 | 30.00 | 30.26 | -0.26 | Before |
| REGRESSION.HCC1395_tumor.L002 | -41 | Cycle | Base Insertion | 27238 | 0.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -41 | Cycle | Base Deletion | 27238 | 1.73 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -42 | Cycle | Base Substitution | 27201 | 32.17 | 30.00 | 30.27 | -0.27 | Before |
| REGRESSION.HCC1395_tumor.L002 | -42 | Cycle | Base Insertion | 27200 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -42 | Cycle | Base Deletion | 27200 | 1.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -43 | Cycle | Base Substitution | 27269 | 48.63 | 29.00 | 30.35 | -1.35 | Before |
| REGRESSION.HCC1395_tumor.L002 | -43 | Cycle | Base Insertion | 27266 | 0.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -43 | Cycle | Base Deletion | 27266 | 1.57 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -44 | Cycle | Base Substitution | 27134 | 35.47 | 30.00 | 30.49 | -0.49 | Before |
| REGRESSION.HCC1395_tumor.L002 | -44 | Cycle | Base Insertion | 27130 | 0.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -44 | Cycle | Base Deletion | 27130 | 1.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -45 | Cycle | Base Substitution | 27292 | 35.54 | 30.00 | 30.40 | -0.40 | Before |
| REGRESSION.HCC1395_tumor.L002 | -45 | Cycle | Base Insertion | 27287 | 0.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -45 | Cycle | Base Deletion | 27287 | 1.85 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -46 | Cycle | Base Substitution | 27205 | 35.04 | 30.00 | 30.70 | -0.70 | Before |
| REGRESSION.HCC1395_tumor.L002 | -46 | Cycle | Base Insertion | 27198 | 0.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -46 | Cycle | Base Deletion | 27198 | 2.02 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -47 | Cycle | Base Substitution | 27175 | 34.03 | 30.00 | 30.56 | -0.56 | Before |
| REGRESSION.HCC1395_tumor.L002 | -47 | Cycle | Base Insertion | 27170 | 0.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -47 | Cycle | Base Deletion | 27170 | 1.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -48 | Cycle | Base Substitution | 27183 | 31.13 | 30.00 | 30.55 | -0.55 | Before |
| REGRESSION.HCC1395_tumor.L002 | -48 | Cycle | Base Insertion | 27174 | 1.09 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -48 | Cycle | Base Deletion | 27174 | 2.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -49 | Cycle | Base Substitution | 27255 | 40.38 | 29.00 | 30.62 | -1.62 | Before |
| REGRESSION.HCC1395_tumor.L002 | -49 | Cycle | Base Insertion | 27243 | 0.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -49 | Cycle | Base Deletion | 27243 | 2.01 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -5 | Cycle | Base Substitution | 27638 | 59.37 | 29.00 | 30.15 | -1.15 | Before |
| REGRESSION.HCC1395_tumor.L002 | -5 | Cycle | Base Insertion | 27638 | 0.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -5 | Cycle | Base Deletion | 27638 | 0.93 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -50 | Cycle | Base Substitution | 27096 | 43.75 | 29.00 | 30.43 | -1.43 | Before |
| REGRESSION.HCC1395_tumor.L002 | -50 | Cycle | Base Insertion | 27075 | 0.76 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -50 | Cycle | Base Deletion | 27075 | 2.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -51 | Cycle | Base Substitution | 27125 | 39.36 | 29.00 | 30.43 | -1.43 | Before |
| REGRESSION.HCC1395_tumor.L002 | -51 | Cycle | Base Insertion | 27100 | 0.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -51 | Cycle | Base Deletion | 27100 | 2.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -52 | Cycle | Base Substitution | 27157 | 44.84 | 29.00 | 30.54 | -1.54 | Before |
| REGRESSION.HCC1395_tumor.L002 | -52 | Cycle | Base Insertion | 27130 | 0.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -52 | Cycle | Base Deletion | 27130 | 1.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -53 | Cycle | Base Substitution | 27112 | 33.91 | 30.00 | 30.55 | -0.55 | Before |
| REGRESSION.HCC1395_tumor.L002 | -53 | Cycle | Base Insertion | 27082 | 0.79 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -53 | Cycle | Base Deletion | 27082 | 1.92 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -54 | Cycle | Base Substitution | 27102 | 46.68 | 29.00 | 30.40 | -1.40 | Before |
| REGRESSION.HCC1395_tumor.L002 | -54 | Cycle | Base Insertion | 27076 | 0.76 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -54 | Cycle | Base Deletion | 27076 | 1.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -55 | Cycle | Base Substitution | 27225 | 35.47 | 30.00 | 30.63 | -0.63 | Before |
| REGRESSION.HCC1395_tumor.L002 | -55 | Cycle | Base Insertion | 27192 | 1.03 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -55 | Cycle | Base Deletion | 27192 | 1.76 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -56 | Cycle | Base Substitution | 27124 | 45.11 | 29.00 | 30.56 | -1.56 | Before |
| REGRESSION.HCC1395_tumor.L002 | -56 | Cycle | Base Insertion | 27092 | 0.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -56 | Cycle | Base Deletion | 27092 | 0.78 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -57 | Cycle | Base Substitution | 27099 | 44.28 | 29.00 | 30.80 | -1.80 | Before |
| REGRESSION.HCC1395_tumor.L002 | -57 | Cycle | Base Insertion | 27053 | 0.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -57 | Cycle | Base Deletion | 27053 | 0.65 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -58 | Cycle | Base Substitution | 27131 | 40.22 | 29.00 | 30.98 | -1.98 | Before |
| REGRESSION.HCC1395_tumor.L002 | -58 | Cycle | Base Insertion | 27074 | 0.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -58 | Cycle | Base Deletion | 27074 | 0.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -59 | Cycle | Base Substitution | 27056 | 36.10 | 30.00 | 30.59 | -0.59 | Before |
| REGRESSION.HCC1395_tumor.L002 | -59 | Cycle | Base Insertion | 26994 | 0.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -59 | Cycle | Base Deletion | 26994 | 0.81 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -6 | Cycle | Base Substitution | 27574 | 50.09 | 29.00 | 30.71 | -1.71 | Before |
| REGRESSION.HCC1395_tumor.L002 | -6 | Cycle | Base Insertion | 27574 | 0.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -6 | Cycle | Base Deletion | 27574 | 0.79 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -60 | Cycle | Base Substitution | 26903 | 40.54 | 29.00 | 30.57 | -1.57 | Before |
| REGRESSION.HCC1395_tumor.L002 | -60 | Cycle | Base Insertion | 26837 | 0.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -60 | Cycle | Base Deletion | 26837 | 0.97 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -61 | Cycle | Base Substitution | 27128 | 45.20 | 29.00 | 30.52 | -1.52 | Before |
| REGRESSION.HCC1395_tumor.L002 | -61 | Cycle | Base Insertion | 27060 | 0.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -61 | Cycle | Base Deletion | 27060 | 1.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -62 | Cycle | Base Substitution | 27002 | 31.96 | 30.00 | 30.72 | -0.72 | Before |
| REGRESSION.HCC1395_tumor.L002 | -62 | Cycle | Base Insertion | 26935 | 0.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -62 | Cycle | Base Deletion | 26935 | 1.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -63 | Cycle | Base Substitution | 26946 | 35.47 | 30.00 | 30.75 | -0.75 | Before |
| REGRESSION.HCC1395_tumor.L002 | -63 | Cycle | Base Insertion | 26888 | 0.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -63 | Cycle | Base Deletion | 26888 | 1.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -64 | Cycle | Base Substitution | 26895 | 34.91 | 30.00 | 30.84 | -0.84 | Before |
| REGRESSION.HCC1395_tumor.L002 | -64 | Cycle | Base Insertion | 26824 | 0.81 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -64 | Cycle | Base Deletion | 26824 | 1.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -65 | Cycle | Base Substitution | 26777 | 41.28 | 29.00 | 30.26 | -1.26 | Before |
| REGRESSION.HCC1395_tumor.L002 | -65 | Cycle | Base Insertion | 26698 | 0.84 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -65 | Cycle | Base Deletion | 26698 | 1.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -66 | Cycle | Base Substitution | 26781 | 43.83 | 29.00 | 30.58 | -1.58 | Before |
| REGRESSION.HCC1395_tumor.L002 | -66 | Cycle | Base Insertion | 26705 | 0.81 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -66 | Cycle | Base Deletion | 26705 | 1.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -67 | Cycle | Base Substitution | 26814 | 37.50 | 29.00 | 30.58 | -1.58 | Before |
| REGRESSION.HCC1395_tumor.L002 | -67 | Cycle | Base Insertion | 26721 | 0.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -67 | Cycle | Base Deletion | 26721 | 1.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -68 | Cycle | Base Substitution | 26759 | 48.49 | 29.00 | 30.61 | -1.61 | Before |
| REGRESSION.HCC1395_tumor.L002 | -68 | Cycle | Base Insertion | 26669 | 0.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -68 | Cycle | Base Deletion | 26669 | 1.82 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -69 | Cycle | Base Substitution | 26760 | 36.50 | 30.00 | 30.52 | -0.52 | Before |
| REGRESSION.HCC1395_tumor.L002 | -69 | Cycle | Base Insertion | 26672 | 0.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -69 | Cycle | Base Deletion | 26672 | 1.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -7 | Cycle | Base Substitution | 27590 | 43.99 | 29.00 | 30.53 | -1.53 | Before |
| REGRESSION.HCC1395_tumor.L002 | -7 | Cycle | Base Insertion | 27590 | 0.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -7 | Cycle | Base Deletion | 27590 | 0.75 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -70 | Cycle | Base Substitution | 26761 | 44.47 | 29.00 | 30.56 | -1.56 | Before |
| REGRESSION.HCC1395_tumor.L002 | -70 | Cycle | Base Insertion | 26657 | 0.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -70 | Cycle | Base Deletion | 26657 | 1.67 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -71 | Cycle | Base Substitution | 26755 | 40.97 | 29.00 | 30.39 | -1.39 | Before |
| REGRESSION.HCC1395_tumor.L002 | -71 | Cycle | Base Insertion | 26644 | 1.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -71 | Cycle | Base Deletion | 26644 | 1.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -72 | Cycle | Base Substitution | 26757 | 45.00 | 29.00 | 30.67 | -1.67 | Before |
| REGRESSION.HCC1395_tumor.L002 | -72 | Cycle | Base Insertion | 26635 | 1.09 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -72 | Cycle | Base Deletion | 26635 | 1.61 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -73 | Cycle | Base Substitution | 26765 | 48.65 | 29.00 | 30.25 | -1.25 | Before |
| REGRESSION.HCC1395_tumor.L002 | -73 | Cycle | Base Insertion | 26644 | 1.88 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -73 | Cycle | Base Deletion | 26644 | 1.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -74 | Cycle | Base Substitution | 26591 | 47.03 | 29.00 | 30.55 | -1.55 | Before |
| REGRESSION.HCC1395_tumor.L002 | -74 | Cycle | Base Insertion | 26468 | 1.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -74 | Cycle | Base Deletion | 26468 | 0.99 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -75 | Cycle | Base Substitution | 26624 | 35.60 | 30.00 | 30.35 | -0.35 | Before |
| REGRESSION.HCC1395_tumor.L002 | -75 | Cycle | Base Insertion | 26488 | 1.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -75 | Cycle | Base Deletion | 26488 | 1.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -76 | Cycle | Base Substitution | 26527 | 47.38 | 29.00 | 30.58 | -1.58 | Before |
| REGRESSION.HCC1395_tumor.L002 | -76 | Cycle | Base Insertion | 26401 | 0.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -76 | Cycle | Base Deletion | 26401 | 1.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -77 | Cycle | Base Substitution | 26519 | 37.65 | 29.00 | 30.39 | -1.39 | Before |
| REGRESSION.HCC1395_tumor.L002 | -77 | Cycle | Base Insertion | 26385 | 0.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -77 | Cycle | Base Deletion | 26385 | 1.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -78 | Cycle | Base Substitution | 26546 | 45.89 | 29.00 | 30.56 | -1.56 | Before |
| REGRESSION.HCC1395_tumor.L002 | -78 | Cycle | Base Insertion | 26397 | 0.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -78 | Cycle | Base Deletion | 26397 | 1.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -79 | Cycle | Base Substitution | 26472 | 38.03 | 29.00 | 30.55 | -1.55 | Before |
| REGRESSION.HCC1395_tumor.L002 | -79 | Cycle | Base Insertion | 26318 | 0.69 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -79 | Cycle | Base Deletion | 26318 | 1.82 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -8 | Cycle | Base Substitution | 27468 | 39.79 | 29.00 | 30.62 | -1.62 | Before |
| REGRESSION.HCC1395_tumor.L002 | -8 | Cycle | Base Insertion | 27468 | 0.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -8 | Cycle | Base Deletion | 27468 | 0.85 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -80 | Cycle | Base Substitution | 26423 | 47.79 | 29.00 | 30.15 | -1.15 | Before |
| REGRESSION.HCC1395_tumor.L002 | -80 | Cycle | Base Insertion | 26255 | 0.86 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -80 | Cycle | Base Deletion | 26255 | 1.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -81 | Cycle | Base Substitution | 26396 | 44.30 | 29.00 | 30.27 | -1.27 | Before |
| REGRESSION.HCC1395_tumor.L002 | -81 | Cycle | Base Insertion | 26223 | 0.79 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -81 | Cycle | Base Deletion | 26223 | 1.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -82 | Cycle | Base Substitution | 26472 | 47.71 | 29.00 | 30.35 | -1.35 | Before |
| REGRESSION.HCC1395_tumor.L002 | -82 | Cycle | Base Insertion | 26291 | 0.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -82 | Cycle | Base Deletion | 26291 | 1.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -83 | Cycle | Base Substitution | 26289 | 44.08 | 29.00 | 30.73 | -1.73 | Before |
| REGRESSION.HCC1395_tumor.L002 | -83 | Cycle | Base Insertion | 26118 | 0.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -83 | Cycle | Base Deletion | 26118 | 0.77 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -84 | Cycle | Base Substitution | 26285 | 45.21 | 29.00 | 30.45 | -1.45 | Before |
| REGRESSION.HCC1395_tumor.L002 | -84 | Cycle | Base Insertion | 26112 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -84 | Cycle | Base Deletion | 26112 | 0.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -85 | Cycle | Base Substitution | 26233 | 29.87 | 30.00 | 30.19 | -0.19 | Before |
| REGRESSION.HCC1395_tumor.L002 | -85 | Cycle | Base Insertion | 26050 | 0.75 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -85 | Cycle | Base Deletion | 26050 | 0.88 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -86 | Cycle | Base Substitution | 26200 | 49.59 | 29.00 | 30.18 | -1.18 | Before |
| REGRESSION.HCC1395_tumor.L002 | -86 | Cycle | Base Insertion | 26019 | 1.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -86 | Cycle | Base Deletion | 26019 | 0.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -87 | Cycle | Base Substitution | 26243 | 36.68 | 30.00 | 30.50 | -0.50 | Before |
| REGRESSION.HCC1395_tumor.L002 | -87 | Cycle | Base Insertion | 26039 | 0.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -87 | Cycle | Base Deletion | 26039 | 0.81 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -88 | Cycle | Base Substitution | 26179 | 40.00 | 29.00 | 30.05 | -1.05 | Before |
| REGRESSION.HCC1395_tumor.L002 | -88 | Cycle | Base Insertion | 25966 | 0.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -88 | Cycle | Base Deletion | 25966 | 0.67 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -89 | Cycle | Base Substitution | 26097 | 46.81 | 29.00 | 30.12 | -1.12 | Before |
| REGRESSION.HCC1395_tumor.L002 | -89 | Cycle | Base Insertion | 25879 | 0.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -89 | Cycle | Base Deletion | 25879 | 1.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -9 | Cycle | Base Substitution | 27571 | 33.97 | 30.00 | 31.11 | -1.11 | Before |
| REGRESSION.HCC1395_tumor.L002 | -9 | Cycle | Base Insertion | 27571 | 0.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -9 | Cycle | Base Deletion | 27571 | 1.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -90 | Cycle | Base Substitution | 25882 | 61.74 | 28.00 | 30.19 | -2.19 | Before |
| REGRESSION.HCC1395_tumor.L002 | -90 | Cycle | Base Insertion | 25668 | 0.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -90 | Cycle | Base Deletion | 25668 | 1.21 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -91 | Cycle | Base Substitution | 26075 | 38.49 | 29.00 | 30.28 | -1.28 | Before |
| REGRESSION.HCC1395_tumor.L002 | -91 | Cycle | Base Insertion | 25862 | 0.66 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -91 | Cycle | Base Deletion | 25862 | 1.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -92 | Cycle | Base Substitution | 25977 | 61.43 | 29.00 | 30.38 | -1.38 | Before |
| REGRESSION.HCC1395_tumor.L002 | -92 | Cycle | Base Insertion | 25774 | 0.87 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -92 | Cycle | Base Deletion | 25774 | 1.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -93 | Cycle | Base Substitution | 25809 | 40.12 | 29.00 | 30.62 | -1.62 | Before |
| REGRESSION.HCC1395_tumor.L002 | -93 | Cycle | Base Insertion | 25594 | 0.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -93 | Cycle | Base Deletion | 25594 | 1.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -94 | Cycle | Base Substitution | 25834 | 59.70 | 29.00 | 30.09 | -1.09 | Before |
| REGRESSION.HCC1395_tumor.L002 | -94 | Cycle | Base Insertion | 25602 | 1.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -94 | Cycle | Base Deletion | 25602 | 1.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -95 | Cycle | Base Substitution | 25651 | 51.61 | 29.00 | 30.29 | -1.29 | Before |
| REGRESSION.HCC1395_tumor.L002 | -95 | Cycle | Base Insertion | 25426 | 1.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -95 | Cycle | Base Deletion | 25426 | 0.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -96 | Cycle | Base Substitution | 25648 | 46.28 | 28.00 | 29.77 | -1.77 | Before |
| REGRESSION.HCC1395_tumor.L002 | -96 | Cycle | Base Insertion | 25418 | 1.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -96 | Cycle | Base Deletion | 25418 | 0.83 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -97 | Cycle | Base Substitution | 25544 | 42.63 | 29.00 | 30.66 | -1.66 | Before |
| REGRESSION.HCC1395_tumor.L002 | -97 | Cycle | Base Insertion | 25318 | 0.78 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -97 | Cycle | Base Deletion | 25318 | 0.86 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -98 | Cycle | Base Substitution | 25550 | 49.09 | 29.00 | 30.12 | -1.12 | Before |
| REGRESSION.HCC1395_tumor.L002 | -98 | Cycle | Base Insertion | 25299 | 0.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -98 | Cycle | Base Deletion | 25299 | 0.97 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -99 | Cycle | Base Substitution | 25452 | 47.10 | 28.00 | 29.91 | -1.91 | Before |
| REGRESSION.HCC1395_tumor.L002 | -99 | Cycle | Base Insertion | 25202 | 0.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | -99 | Cycle | Base Deletion | 25202 | 0.82 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 1 | Cycle | Base Substitution | 27112 | 61.94 | 27.00 | 28.44 | -1.44 | Before |
| REGRESSION.HCC1395_tumor.L002 | 10 | Cycle | Base Substitution | 27392 | 39.12 | 30.00 | 31.14 | -1.14 | Before |
| REGRESSION.HCC1395_tumor.L002 | 10 | Cycle | Base Insertion | 27392 | 0.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 10 | Cycle | Base Deletion | 27392 | 0.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 100 | Cycle | Base Substitution | 25209 | 43.29 | 29.00 | 30.36 | -1.36 | Before |
| REGRESSION.HCC1395_tumor.L002 | 100 | Cycle | Base Insertion | 24951 | 0.73 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 100 | Cycle | Base Deletion | 24951 | 1.85 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 101 | Cycle | Base Substitution | 25136 | 48.51 | 29.00 | 30.21 | -1.21 | Before |
| REGRESSION.HCC1395_tumor.L002 | 101 | Cycle | Base Insertion | 24864 | 1.09 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 101 | Cycle | Base Deletion | 24864 | 1.82 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 102 | Cycle | Base Substitution | 25152 | 46.71 | 29.00 | 30.27 | -1.27 | Before |
| REGRESSION.HCC1395_tumor.L002 | 102 | Cycle | Base Insertion | 24898 | 0.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 102 | Cycle | Base Deletion | 24898 | 2.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 103 | Cycle | Base Substitution | 25012 | 37.99 | 29.00 | 30.36 | -1.36 | Before |
| REGRESSION.HCC1395_tumor.L002 | 103 | Cycle | Base Insertion | 24730 | 0.76 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 103 | Cycle | Base Deletion | 24730 | 2.03 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 104 | Cycle | Base Substitution | 24980 | 48.71 | 29.00 | 30.40 | -1.40 | Before |
| REGRESSION.HCC1395_tumor.L002 | 104 | Cycle | Base Insertion | 24697 | 0.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 104 | Cycle | Base Deletion | 24697 | 1.74 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 105 | Cycle | Base Substitution | 24908 | 39.37 | 29.00 | 30.16 | -1.16 | Before |
| REGRESSION.HCC1395_tumor.L002 | 105 | Cycle | Base Insertion | 24643 | 0.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 105 | Cycle | Base Deletion | 24643 | 1.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 106 | Cycle | Base Substitution | 24861 | 40.84 | 29.00 | 30.55 | -1.55 | Before |
| REGRESSION.HCC1395_tumor.L002 | 106 | Cycle | Base Insertion | 24596 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 106 | Cycle | Base Deletion | 24596 | 1.69 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 107 | Cycle | Base Substitution | 24850 | 51.08 | 29.00 | 30.06 | -1.06 | Before |
| REGRESSION.HCC1395_tumor.L002 | 107 | Cycle | Base Insertion | 24605 | 0.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 107 | Cycle | Base Deletion | 24605 | 1.09 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 108 | Cycle | Base Substitution | 24702 | 56.86 | 29.00 | 30.01 | -1.01 | Before |
| REGRESSION.HCC1395_tumor.L002 | 108 | Cycle | Base Insertion | 24461 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 108 | Cycle | Base Deletion | 24461 | 1.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 109 | Cycle | Base Substitution | 24685 | 43.73 | 28.00 | 29.85 | -1.85 | Before |
| REGRESSION.HCC1395_tumor.L002 | 109 | Cycle | Base Insertion | 24418 | 0.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 109 | Cycle | Base Deletion | 24418 | 0.97 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 11 | Cycle | Base Substitution | 27411 | 33.32 | 30.00 | 31.30 | -1.30 | Before |
| REGRESSION.HCC1395_tumor.L002 | 11 | Cycle | Base Insertion | 27411 | 0.79 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 11 | Cycle | Base Deletion | 27411 | 0.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 110 | Cycle | Base Substitution | 24686 | 45.36 | 29.00 | 30.03 | -1.03 | Before |
| REGRESSION.HCC1395_tumor.L002 | 110 | Cycle | Base Insertion | 24408 | 0.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 110 | Cycle | Base Deletion | 24408 | 1.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 111 | Cycle | Base Substitution | 24647 | 42.62 | 29.00 | 30.27 | -1.27 | Before |
| REGRESSION.HCC1395_tumor.L002 | 111 | Cycle | Base Insertion | 24381 | 0.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 111 | Cycle | Base Deletion | 24381 | 1.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 112 | Cycle | Base Substitution | 24453 | 41.49 | 29.00 | 30.33 | -1.33 | Before |
| REGRESSION.HCC1395_tumor.L002 | 112 | Cycle | Base Insertion | 24197 | 0.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 112 | Cycle | Base Deletion | 24197 | 1.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 113 | Cycle | Base Substitution | 24316 | 34.84 | 30.00 | 30.51 | -0.51 | Before |
| REGRESSION.HCC1395_tumor.L002 | 113 | Cycle | Base Insertion | 24081 | 0.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 113 | Cycle | Base Deletion | 24081 | 1.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 114 | Cycle | Base Substitution | 24413 | 43.12 | 29.00 | 30.32 | -1.32 | Before |
| REGRESSION.HCC1395_tumor.L002 | 114 | Cycle | Base Insertion | 24158 | 0.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 114 | Cycle | Base Deletion | 24158 | 0.79 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 115 | Cycle | Base Substitution | 24294 | 41.92 | 29.00 | 29.76 | -0.76 | Before |
| REGRESSION.HCC1395_tumor.L002 | 115 | Cycle | Base Insertion | 24041 | 0.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 115 | Cycle | Base Deletion | 24041 | 0.74 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 116 | Cycle | Base Substitution | 24141 | 51.13 | 28.00 | 29.84 | -1.84 | Before |
| REGRESSION.HCC1395_tumor.L002 | 116 | Cycle | Base Insertion | 23853 | 0.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 116 | Cycle | Base Deletion | 23853 | 1.03 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 117 | Cycle | Base Substitution | 24169 | 56.50 | 28.00 | 29.80 | -1.80 | Before |
| REGRESSION.HCC1395_tumor.L002 | 117 | Cycle | Base Insertion | 23872 | 0.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 117 | Cycle | Base Deletion | 23872 | 1.21 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 118 | Cycle | Base Substitution | 24159 | 41.91 | 29.00 | 30.25 | -1.25 | Before |
| REGRESSION.HCC1395_tumor.L002 | 118 | Cycle | Base Insertion | 23854 | 0.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 118 | Cycle | Base Deletion | 23854 | 1.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 119 | Cycle | Base Substitution | 24078 | 40.39 | 29.00 | 29.95 | -0.95 | Before |
| REGRESSION.HCC1395_tumor.L002 | 119 | Cycle | Base Insertion | 23781 | 0.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 119 | Cycle | Base Deletion | 23781 | 0.77 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 12 | Cycle | Base Substitution | 27386 | 32.23 | 31.00 | 31.04 | -0.04 | Before |
| REGRESSION.HCC1395_tumor.L002 | 12 | Cycle | Base Insertion | 27386 | 0.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 12 | Cycle | Base Deletion | 27386 | 0.81 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 120 | Cycle | Base Substitution | 23954 | 42.22 | 28.00 | 29.98 | -1.98 | Before |
| REGRESSION.HCC1395_tumor.L002 | 120 | Cycle | Base Insertion | 23673 | 0.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 120 | Cycle | Base Deletion | 23673 | 0.86 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 121 | Cycle | Base Substitution | 23916 | 53.23 | 28.00 | 29.74 | -1.74 | Before |
| REGRESSION.HCC1395_tumor.L002 | 121 | Cycle | Base Insertion | 23653 | 0.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 121 | Cycle | Base Deletion | 23653 | 0.93 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 122 | Cycle | Base Substitution | 23793 | 39.11 | 29.00 | 30.18 | -1.18 | Before |
| REGRESSION.HCC1395_tumor.L002 | 122 | Cycle | Base Insertion | 23505 | 0.74 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 122 | Cycle | Base Deletion | 23505 | 1.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 123 | Cycle | Base Substitution | 23859 | 42.78 | 28.00 | 30.00 | -2.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 123 | Cycle | Base Insertion | 23580 | 0.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 123 | Cycle | Base Deletion | 23580 | 1.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 124 | Cycle | Base Substitution | 23797 | 60.01 | 28.00 | 29.91 | -1.91 | Before |
| REGRESSION.HCC1395_tumor.L002 | 124 | Cycle | Base Insertion | 23492 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 124 | Cycle | Base Deletion | 23492 | 1.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 125 | Cycle | Base Substitution | 23627 | 52.18 | 28.00 | 29.65 | -1.65 | Before |
| REGRESSION.HCC1395_tumor.L002 | 125 | Cycle | Base Insertion | 23313 | 0.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 125 | Cycle | Base Deletion | 23313 | 1.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 126 | Cycle | Base Substitution | 23599 | 50.71 | 28.00 | 29.88 | -1.88 | Before |
| REGRESSION.HCC1395_tumor.L002 | 126 | Cycle | Base Insertion | 23311 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 126 | Cycle | Base Deletion | 23311 | 1.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 127 | Cycle | Base Substitution | 23538 | 35.57 | 29.00 | 30.18 | -1.18 | Before |
| REGRESSION.HCC1395_tumor.L002 | 127 | Cycle | Base Insertion | 23233 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 127 | Cycle | Base Deletion | 23233 | 1.09 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 128 | Cycle | Base Substitution | 23353 | 49.68 | 28.00 | 29.91 | -1.91 | Before |
| REGRESSION.HCC1395_tumor.L002 | 128 | Cycle | Base Insertion | 23033 | 1.07 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 128 | Cycle | Base Deletion | 23033 | 1.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 129 | Cycle | Base Substitution | 23381 | 46.19 | 28.00 | 29.74 | -1.74 | Before |
| REGRESSION.HCC1395_tumor.L002 | 129 | Cycle | Base Insertion | 23071 | 0.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 129 | Cycle | Base Deletion | 23071 | 1.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 13 | Cycle | Base Substitution | 27379 | 30.81 | 31.00 | 31.03 | -0.03 | Before |
| REGRESSION.HCC1395_tumor.L002 | 13 | Cycle | Base Insertion | 27379 | 0.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 13 | Cycle | Base Deletion | 27379 | 0.90 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 130 | Cycle | Base Substitution | 23370 | 45.99 | 28.00 | 29.95 | -1.95 | Before |
| REGRESSION.HCC1395_tumor.L002 | 130 | Cycle | Base Insertion | 23084 | 0.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 130 | Cycle | Base Deletion | 23084 | 1.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 131 | Cycle | Base Substitution | 23273 | 57.09 | 28.00 | 29.78 | -1.78 | Before |
| REGRESSION.HCC1395_tumor.L002 | 131 | Cycle | Base Insertion | 22966 | 0.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 131 | Cycle | Base Deletion | 22966 | 1.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 132 | Cycle | Base Substitution | 23142 | 55.02 | 28.00 | 29.85 | -1.85 | Before |
| REGRESSION.HCC1395_tumor.L002 | 132 | Cycle | Base Insertion | 22834 | 0.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 132 | Cycle | Base Deletion | 22834 | 1.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 133 | Cycle | Base Substitution | 23142 | 57.03 | 28.00 | 29.78 | -1.78 | Before |
| REGRESSION.HCC1395_tumor.L002 | 133 | Cycle | Base Insertion | 22815 | 1.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 133 | Cycle | Base Deletion | 22815 | 1.03 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 134 | Cycle | Base Substitution | 23137 | 44.18 | 29.00 | 30.00 | -1.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 134 | Cycle | Base Insertion | 22804 | 0.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 134 | Cycle | Base Deletion | 22804 | 0.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 135 | Cycle | Base Substitution | 23016 | 40.84 | 28.00 | 29.85 | -1.85 | Before |
| REGRESSION.HCC1395_tumor.L002 | 135 | Cycle | Base Insertion | 22677 | 0.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 135 | Cycle | Base Deletion | 22677 | 0.57 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 136 | Cycle | Base Substitution | 22922 | 42.57 | 28.00 | 29.90 | -1.90 | Before |
| REGRESSION.HCC1395_tumor.L002 | 136 | Cycle | Base Insertion | 22591 | 0.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 136 | Cycle | Base Deletion | 22591 | 0.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 137 | Cycle | Base Substitution | 22854 | 43.86 | 28.00 | 29.85 | -1.85 | Before |
| REGRESSION.HCC1395_tumor.L002 | 137 | Cycle | Base Insertion | 22505 | 0.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 137 | Cycle | Base Deletion | 22505 | 0.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 138 | Cycle | Base Substitution | 22793 | 54.01 | 28.00 | 29.79 | -1.79 | Before |
| REGRESSION.HCC1395_tumor.L002 | 138 | Cycle | Base Insertion | 22454 | 0.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 138 | Cycle | Base Deletion | 22454 | 0.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 139 | Cycle | Base Substitution | 22756 | 72.68 | 27.00 | 29.68 | -2.68 | Before |
| REGRESSION.HCC1395_tumor.L002 | 139 | Cycle | Base Insertion | 22392 | 0.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 139 | Cycle | Base Deletion | 22392 | 0.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 14 | Cycle | Base Substitution | 27359 | 33.35 | 30.00 | 31.17 | -1.17 | Before |
| REGRESSION.HCC1395_tumor.L002 | 14 | Cycle | Base Insertion | 27359 | 0.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 14 | Cycle | Base Deletion | 27359 | 1.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 140 | Cycle | Base Substitution | 22584 | 49.72 | 28.00 | 29.84 | -1.84 | Before |
| REGRESSION.HCC1395_tumor.L002 | 140 | Cycle | Base Insertion | 22245 | 0.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 140 | Cycle | Base Deletion | 22245 | 0.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 141 | Cycle | Base Substitution | 22453 | 46.22 | 28.00 | 30.00 | -2.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 141 | Cycle | Base Insertion | 22108 | 0.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 141 | Cycle | Base Deletion | 22108 | 0.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 142 | Cycle | Base Substitution | 22441 | 53.59 | 28.00 | 29.87 | -1.87 | Before |
| REGRESSION.HCC1395_tumor.L002 | 142 | Cycle | Base Insertion | 22038 | 0.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 142 | Cycle | Base Deletion | 22038 | 0.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 143 | Cycle | Base Substitution | 22319 | 44.69 | 28.00 | 29.80 | -1.80 | Before |
| REGRESSION.HCC1395_tumor.L002 | 143 | Cycle | Base Insertion | 21914 | 0.07 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 143 | Cycle | Base Deletion | 21914 | 0.21 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 144 | Cycle | Base Substitution | 22274 | 47.07 | 28.00 | 29.66 | -1.66 | Before |
| REGRESSION.HCC1395_tumor.L002 | 144 | Cycle | Base Insertion | 21854 | 0.07 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 144 | Cycle | Base Deletion | 21854 | 0.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 145 | Cycle | Base Substitution | 22145 | 35.92 | 29.00 | 29.80 | -0.80 | Before |
| REGRESSION.HCC1395_tumor.L002 | 145 | Cycle | Base Insertion | 21735 | 0.07 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 145 | Cycle | Base Deletion | 21735 | 0.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 146 | Cycle | Base Substitution | 22031 | 46.66 | 28.00 | 29.97 | -1.97 | Before |
| REGRESSION.HCC1395_tumor.L002 | 146 | Cycle | Base Insertion | 21668 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 146 | Cycle | Base Deletion | 21668 | 0.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 147 | Cycle | Base Substitution | 22012 | 53.21 | 28.00 | 29.87 | -1.87 | Before |
| REGRESSION.HCC1395_tumor.L002 | 148 | Cycle | Base Substitution | 21931 | 55.13 | 28.00 | 29.90 | -1.90 | Before |
| REGRESSION.HCC1395_tumor.L002 | 149 | Cycle | Base Substitution | 21847 | 46.23 | 28.00 | 29.84 | -1.84 | Before |
| REGRESSION.HCC1395_tumor.L002 | 15 | Cycle | Base Substitution | 27336 | 29.29 | 31.00 | 31.62 | -0.62 | Before |
| REGRESSION.HCC1395_tumor.L002 | 15 | Cycle | Base Insertion | 27336 | 0.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 15 | Cycle | Base Deletion | 27336 | 1.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 150 | Cycle | Base Substitution | 21649 | 45.45 | 29.00 | 30.05 | -1.05 | Before |
| REGRESSION.HCC1395_tumor.L002 | 16 | Cycle | Base Substitution | 27217 | 25.09 | 32.00 | 32.93 | -0.93 | Before |
| REGRESSION.HCC1395_tumor.L002 | 16 | Cycle | Base Insertion | 27217 | 0.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 16 | Cycle | Base Deletion | 27217 | 1.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 17 | Cycle | Base Substitution | 27308 | 32.08 | 31.00 | 32.35 | -1.35 | Before |
| REGRESSION.HCC1395_tumor.L002 | 17 | Cycle | Base Insertion | 27308 | 0.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 17 | Cycle | Base Deletion | 27308 | 2.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 18 | Cycle | Base Substitution | 27472 | 20.99 | 32.00 | 32.90 | -0.90 | Before |
| REGRESSION.HCC1395_tumor.L002 | 18 | Cycle | Base Insertion | 27472 | 1.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 18 | Cycle | Base Deletion | 27472 | 2.95 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 19 | Cycle | Base Substitution | 27190 | 20.75 | 33.00 | 33.03 | -0.03 | Before |
| REGRESSION.HCC1395_tumor.L002 | 19 | Cycle | Base Insertion | 27190 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 19 | Cycle | Base Deletion | 27190 | 1.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 2 | Cycle | Base Substitution | 27567 | 55.19 | 29.00 | 30.21 | -1.21 | Before |
| REGRESSION.HCC1395_tumor.L002 | 20 | Cycle | Base Substitution | 27208 | 29.04 | 31.00 | 32.65 | -1.65 | Before |
| REGRESSION.HCC1395_tumor.L002 | 20 | Cycle | Base Insertion | 27208 | 0.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 20 | Cycle | Base Deletion | 27208 | 1.76 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 21 | Cycle | Base Substitution | 27269 | 21.84 | 32.00 | 32.50 | -0.50 | Before |
| REGRESSION.HCC1395_tumor.L002 | 21 | Cycle | Base Insertion | 27269 | 0.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 21 | Cycle | Base Deletion | 27269 | 1.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 22 | Cycle | Base Substitution | 27245 | 23.46 | 33.00 | 33.25 | -0.25 | Before |
| REGRESSION.HCC1395_tumor.L002 | 22 | Cycle | Base Insertion | 27245 | 0.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 22 | Cycle | Base Deletion | 27245 | 1.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 23 | Cycle | Base Substitution | 27264 | 22.78 | 32.00 | 32.82 | -0.82 | Before |
| REGRESSION.HCC1395_tumor.L002 | 23 | Cycle | Base Insertion | 27264 | 0.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 23 | Cycle | Base Deletion | 27264 | 2.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 24 | Cycle | Base Substitution | 27207 | 23.58 | 32.00 | 33.18 | -1.18 | Before |
| REGRESSION.HCC1395_tumor.L002 | 24 | Cycle | Base Insertion | 27207 | 0.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 24 | Cycle | Base Deletion | 27207 | 1.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 25 | Cycle | Base Substitution | 27203 | 26.45 | 32.00 | 32.91 | -0.91 | Before |
| REGRESSION.HCC1395_tumor.L002 | 25 | Cycle | Base Insertion | 27203 | 0.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 25 | Cycle | Base Deletion | 27203 | 1.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 26 | Cycle | Base Substitution | 27303 | 29.71 | 31.00 | 31.49 | -0.49 | Before |
| REGRESSION.HCC1395_tumor.L002 | 26 | Cycle | Base Insertion | 27303 | 0.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 26 | Cycle | Base Deletion | 27303 | 1.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 27 | Cycle | Base Substitution | 27236 | 31.62 | 31.00 | 31.51 | -0.51 | Before |
| REGRESSION.HCC1395_tumor.L002 | 27 | Cycle | Base Insertion | 27236 | 1.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 27 | Cycle | Base Deletion | 27236 | 1.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 28 | Cycle | Base Substitution | 27226 | 32.48 | 30.00 | 31.47 | -1.47 | Before |
| REGRESSION.HCC1395_tumor.L002 | 28 | Cycle | Base Insertion | 27226 | 1.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 28 | Cycle | Base Deletion | 27226 | 0.93 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 29 | Cycle | Base Substitution | 27182 | 27.94 | 31.00 | 31.24 | -0.24 | Before |
| REGRESSION.HCC1395_tumor.L002 | 29 | Cycle | Base Insertion | 27181 | 1.78 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 29 | Cycle | Base Deletion | 27181 | 1.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 3 | Cycle | Base Substitution | 27730 | 61.55 | 29.00 | 30.71 | -1.71 | Before |
| REGRESSION.HCC1395_tumor.L002 | 30 | Cycle | Base Substitution | 27204 | 30.40 | 31.00 | 31.56 | -0.56 | Before |
| REGRESSION.HCC1395_tumor.L002 | 30 | Cycle | Base Insertion | 27202 | 1.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 30 | Cycle | Base Deletion | 27202 | 0.96 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 31 | Cycle | Base Substitution | 27205 | 33.28 | 30.00 | 31.44 | -1.44 | Before |
| REGRESSION.HCC1395_tumor.L002 | 31 | Cycle | Base Insertion | 27204 | 0.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 31 | Cycle | Base Deletion | 27204 | 1.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 32 | Cycle | Base Substitution | 27242 | 38.67 | 30.00 | 31.55 | -1.55 | Before |
| REGRESSION.HCC1395_tumor.L002 | 32 | Cycle | Base Insertion | 27241 | 0.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 32 | Cycle | Base Deletion | 27241 | 1.07 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 33 | Cycle | Base Substitution | 27221 | 34.03 | 30.00 | 31.57 | -1.57 | Before |
| REGRESSION.HCC1395_tumor.L002 | 33 | Cycle | Base Insertion | 27219 | 0.98 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 33 | Cycle | Base Deletion | 27219 | 1.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 34 | Cycle | Base Substitution | 27178 | 38.61 | 30.00 | 31.54 | -1.54 | Before |
| REGRESSION.HCC1395_tumor.L002 | 34 | Cycle | Base Insertion | 27176 | 1.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 34 | Cycle | Base Deletion | 27176 | 1.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 35 | Cycle | Base Substitution | 27193 | 35.82 | 30.00 | 31.27 | -1.27 | Before |
| REGRESSION.HCC1395_tumor.L002 | 35 | Cycle | Base Insertion | 27191 | 1.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 35 | Cycle | Base Deletion | 27191 | 1.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 36 | Cycle | Base Substitution | 27071 | 49.59 | 30.00 | 31.56 | -1.56 | Before |
| REGRESSION.HCC1395_tumor.L002 | 36 | Cycle | Base Insertion | 27068 | 0.98 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 36 | Cycle | Base Deletion | 27068 | 1.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 37 | Cycle | Base Substitution | 27193 | 29.76 | 31.00 | 31.89 | -0.89 | Before |
| REGRESSION.HCC1395_tumor.L002 | 37 | Cycle | Base Insertion | 27191 | 1.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 37 | Cycle | Base Deletion | 27191 | 1.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 38 | Cycle | Base Substitution | 27135 | 25.94 | 31.00 | 31.58 | -0.58 | Before |
| REGRESSION.HCC1395_tumor.L002 | 38 | Cycle | Base Insertion | 27133 | 0.82 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 38 | Cycle | Base Deletion | 27133 | 1.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 39 | Cycle | Base Substitution | 27106 | 36.43 | 30.00 | 31.51 | -1.51 | Before |
| REGRESSION.HCC1395_tumor.L002 | 39 | Cycle | Base Insertion | 27104 | 0.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 39 | Cycle | Base Deletion | 27104 | 1.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 4 | Cycle | Base Substitution | 27508 | 57.56 | 29.00 | 30.93 | -1.93 | Before |
| REGRESSION.HCC1395_tumor.L002 | 40 | Cycle | Base Substitution | 27243 | 32.24 | 31.00 | 31.76 | -0.76 | Before |
| REGRESSION.HCC1395_tumor.L002 | 40 | Cycle | Base Insertion | 27240 | 0.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 40 | Cycle | Base Deletion | 27240 | 0.89 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 41 | Cycle | Base Substitution | 27059 | 38.99 | 30.00 | 31.58 | -1.58 | Before |
| REGRESSION.HCC1395_tumor.L002 | 41 | Cycle | Base Insertion | 27057 | 0.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 41 | Cycle | Base Deletion | 27057 | 1.09 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 42 | Cycle | Base Substitution | 27077 | 27.54 | 31.00 | 31.45 | -0.45 | Before |
| REGRESSION.HCC1395_tumor.L002 | 42 | Cycle | Base Insertion | 27076 | 0.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 42 | Cycle | Base Deletion | 27076 | 1.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 43 | Cycle | Base Substitution | 26947 | 34.16 | 30.00 | 31.50 | -1.50 | Before |
| REGRESSION.HCC1395_tumor.L002 | 43 | Cycle | Base Insertion | 26944 | 0.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 43 | Cycle | Base Deletion | 26944 | 1.21 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 44 | Cycle | Base Substitution | 27143 | 28.43 | 31.00 | 31.86 | -0.86 | Before |
| REGRESSION.HCC1395_tumor.L002 | 44 | Cycle | Base Insertion | 27139 | 0.80 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 44 | Cycle | Base Deletion | 27139 | 1.21 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 45 | Cycle | Base Substitution | 27076 | 33.75 | 30.00 | 31.34 | -1.34 | Before |
| REGRESSION.HCC1395_tumor.L002 | 45 | Cycle | Base Insertion | 27070 | 0.91 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 45 | Cycle | Base Deletion | 27070 | 1.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 46 | Cycle | Base Substitution | 27171 | 31.00 | 31.00 | 31.19 | -0.19 | Before |
| REGRESSION.HCC1395_tumor.L002 | 46 | Cycle | Base Insertion | 27164 | 1.74 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 46 | Cycle | Base Deletion | 27164 | 1.81 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 47 | Cycle | Base Substitution | 27078 | 42.04 | 30.00 | 31.40 | -1.40 | Before |
| REGRESSION.HCC1395_tumor.L002 | 47 | Cycle | Base Insertion | 27072 | 2.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 47 | Cycle | Base Deletion | 27072 | 1.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 48 | Cycle | Base Substitution | 26918 | 26.82 | 31.00 | 31.34 | -0.34 | Before |
| REGRESSION.HCC1395_tumor.L002 | 48 | Cycle | Base Insertion | 26908 | 0.67 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 48 | Cycle | Base Deletion | 26908 | 1.73 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 49 | Cycle | Base Substitution | 26935 | 28.60 | 31.00 | 31.52 | -0.52 | Before |
| REGRESSION.HCC1395_tumor.L002 | 49 | Cycle | Base Insertion | 26921 | 0.90 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 49 | Cycle | Base Deletion | 26921 | 1.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 5 | Cycle | Base Substitution | 27622 | 48.03 | 30.00 | 31.27 | -1.27 | Before |
| REGRESSION.HCC1395_tumor.L002 | 5 | Cycle | Base Insertion | 27622 | 0.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 5 | Cycle | Base Deletion | 27622 | 0.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 50 | Cycle | Base Substitution | 26992 | 34.72 | 30.00 | 31.80 | -1.80 | Before |
| REGRESSION.HCC1395_tumor.L002 | 50 | Cycle | Base Insertion | 26975 | 0.60 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 50 | Cycle | Base Deletion | 26975 | 1.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 51 | Cycle | Base Substitution | 26974 | 33.77 | 30.00 | 31.16 | -1.16 | Before |
| REGRESSION.HCC1395_tumor.L002 | 51 | Cycle | Base Insertion | 26950 | 0.98 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 51 | Cycle | Base Deletion | 26950 | 1.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 52 | Cycle | Base Substitution | 26930 | 32.74 | 30.00 | 31.58 | -1.58 | Before |
| REGRESSION.HCC1395_tumor.L002 | 52 | Cycle | Base Insertion | 26905 | 0.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 52 | Cycle | Base Deletion | 26905 | 1.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 53 | Cycle | Base Substitution | 27031 | 36.92 | 30.00 | 31.59 | -1.59 | Before |
| REGRESSION.HCC1395_tumor.L002 | 53 | Cycle | Base Insertion | 27000 | 0.92 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 53 | Cycle | Base Deletion | 27000 | 1.04 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 54 | Cycle | Base Substitution | 27046 | 39.23 | 30.00 | 31.26 | -1.26 | Before |
| REGRESSION.HCC1395_tumor.L002 | 54 | Cycle | Base Insertion | 27020 | 0.90 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 54 | Cycle | Base Deletion | 27020 | 1.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 55 | Cycle | Base Substitution | 26902 | 27.95 | 31.00 | 31.14 | -0.14 | Before |
| REGRESSION.HCC1395_tumor.L002 | 55 | Cycle | Base Insertion | 26871 | 0.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 55 | Cycle | Base Deletion | 26871 | 1.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 56 | Cycle | Base Substitution | 26810 | 38.84 | 30.00 | 31.43 | -1.43 | Before |
| REGRESSION.HCC1395_tumor.L002 | 56 | Cycle | Base Insertion | 26778 | 0.62 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 56 | Cycle | Base Deletion | 26778 | 1.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 57 | Cycle | Base Substitution | 26771 | 45.01 | 30.00 | 31.21 | -1.21 | Before |
| REGRESSION.HCC1395_tumor.L002 | 57 | Cycle | Base Insertion | 26728 | 1.12 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 57 | Cycle | Base Deletion | 26728 | 0.85 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 58 | Cycle | Base Substitution | 26895 | 30.17 | 31.00 | 31.22 | -0.22 | Before |
| REGRESSION.HCC1395_tumor.L002 | 58 | Cycle | Base Insertion | 26835 | 0.73 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 58 | Cycle | Base Deletion | 26835 | 0.96 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 59 | Cycle | Base Substitution | 26822 | 28.95 | 31.00 | 31.35 | -0.35 | Before |
| REGRESSION.HCC1395_tumor.L002 | 59 | Cycle | Base Insertion | 26763 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 59 | Cycle | Base Deletion | 26763 | 0.98 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 6 | Cycle | Base Substitution | 27508 | 30.62 | 31.00 | 31.18 | -0.18 | Before |
| REGRESSION.HCC1395_tumor.L002 | 6 | Cycle | Base Insertion | 27508 | 0.21 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 6 | Cycle | Base Deletion | 27508 | 0.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 60 | Cycle | Base Substitution | 26852 | 25.97 | 31.00 | 31.34 | -0.34 | Before |
| REGRESSION.HCC1395_tumor.L002 | 60 | Cycle | Base Insertion | 26786 | 0.78 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 60 | Cycle | Base Deletion | 26786 | 0.76 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 61 | Cycle | Base Substitution | 26802 | 29.12 | 31.00 | 31.51 | -0.51 | Before |
| REGRESSION.HCC1395_tumor.L002 | 61 | Cycle | Base Insertion | 26735 | 0.61 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 61 | Cycle | Base Deletion | 26735 | 1.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 62 | Cycle | Base Substitution | 26771 | 27.92 | 31.00 | 31.46 | -0.46 | Before |
| REGRESSION.HCC1395_tumor.L002 | 62 | Cycle | Base Insertion | 26699 | 1.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 62 | Cycle | Base Deletion | 26699 | 0.85 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 63 | Cycle | Base Substitution | 26782 | 45.59 | 30.00 | 31.26 | -1.26 | Before |
| REGRESSION.HCC1395_tumor.L002 | 63 | Cycle | Base Insertion | 26716 | 0.73 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 63 | Cycle | Base Deletion | 26716 | 0.61 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 64 | Cycle | Base Substitution | 26813 | 38.16 | 30.00 | 31.16 | -1.16 | Before |
| REGRESSION.HCC1395_tumor.L002 | 64 | Cycle | Base Insertion | 26743 | 0.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 64 | Cycle | Base Deletion | 26743 | 0.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 65 | Cycle | Base Substitution | 26734 | 34.13 | 30.00 | 31.49 | -1.49 | Before |
| REGRESSION.HCC1395_tumor.L002 | 65 | Cycle | Base Insertion | 26648 | 1.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 65 | Cycle | Base Deletion | 26648 | 1.03 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 66 | Cycle | Base Substitution | 26777 | 31.79 | 30.00 | 31.47 | -1.47 | Before |
| REGRESSION.HCC1395_tumor.L002 | 66 | Cycle | Base Insertion | 26698 | 1.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 66 | Cycle | Base Deletion | 26698 | 0.85 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 67 | Cycle | Base Substitution | 26722 | 44.52 | 30.00 | 31.10 | -1.10 | Before |
| REGRESSION.HCC1395_tumor.L002 | 67 | Cycle | Base Insertion | 26638 | 1.69 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 67 | Cycle | Base Deletion | 26638 | 1.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 68 | Cycle | Base Substitution | 26607 | 42.67 | 30.00 | 31.05 | -1.05 | Before |
| REGRESSION.HCC1395_tumor.L002 | 68 | Cycle | Base Insertion | 26516 | 1.81 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 68 | Cycle | Base Deletion | 26516 | 1.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 69 | Cycle | Base Substitution | 26607 | 28.94 | 31.00 | 31.26 | -0.26 | Before |
| REGRESSION.HCC1395_tumor.L002 | 69 | Cycle | Base Insertion | 26513 | 2.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 69 | Cycle | Base Deletion | 26513 | 1.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 7 | Cycle | Base Substitution | 27468 | 37.46 | 30.00 | 30.88 | -0.88 | Before |
| REGRESSION.HCC1395_tumor.L002 | 7 | Cycle | Base Insertion | 27468 | 0.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 7 | Cycle | Base Deletion | 27468 | 0.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 70 | Cycle | Base Substitution | 26649 | 42.42 | 30.00 | 31.30 | -1.30 | Before |
| REGRESSION.HCC1395_tumor.L002 | 70 | Cycle | Base Insertion | 26553 | 1.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 70 | Cycle | Base Deletion | 26553 | 1.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 71 | Cycle | Base Substitution | 26603 | 40.75 | 30.00 | 31.25 | -1.25 | Before |
| REGRESSION.HCC1395_tumor.L002 | 71 | Cycle | Base Insertion | 26496 | 1.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 71 | Cycle | Base Deletion | 26496 | 1.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 72 | Cycle | Base Substitution | 26598 | 37.10 | 30.00 | 31.02 | -1.02 | Before |
| REGRESSION.HCC1395_tumor.L002 | 72 | Cycle | Base Insertion | 26477 | 0.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 72 | Cycle | Base Deletion | 26477 | 1.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 73 | Cycle | Base Substitution | 26579 | 44.44 | 29.00 | 30.89 | -1.89 | Before |
| REGRESSION.HCC1395_tumor.L002 | 73 | Cycle | Base Insertion | 26459 | 0.78 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 73 | Cycle | Base Deletion | 26459 | 1.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 74 | Cycle | Base Substitution | 26499 | 44.71 | 29.00 | 30.88 | -1.88 | Before |
| REGRESSION.HCC1395_tumor.L002 | 74 | Cycle | Base Insertion | 26373 | 0.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 74 | Cycle | Base Deletion | 26373 | 1.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 75 | Cycle | Base Substitution | 26558 | 30.60 | 31.00 | 31.20 | -0.20 | Before |
| REGRESSION.HCC1395_tumor.L002 | 75 | Cycle | Base Insertion | 26417 | 0.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 75 | Cycle | Base Deletion | 26417 | 1.66 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 76 | Cycle | Base Substitution | 26410 | 30.99 | 31.00 | 31.10 | -0.10 | Before |
| REGRESSION.HCC1395_tumor.L002 | 76 | Cycle | Base Insertion | 26285 | 0.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 76 | Cycle | Base Deletion | 26285 | 2.02 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 77 | Cycle | Base Substitution | 26306 | 50.13 | 29.00 | 30.97 | -1.97 | Before |
| REGRESSION.HCC1395_tumor.L002 | 77 | Cycle | Base Insertion | 26174 | 0.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 77 | Cycle | Base Deletion | 26174 | 1.78 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 78 | Cycle | Base Substitution | 26285 | 38.94 | 29.00 | 30.68 | -1.68 | Before |
| REGRESSION.HCC1395_tumor.L002 | 78 | Cycle | Base Insertion | 26134 | 0.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 78 | Cycle | Base Deletion | 26134 | 1.86 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 79 | Cycle | Base Substitution | 26282 | 41.96 | 29.00 | 30.95 | -1.95 | Before |
| REGRESSION.HCC1395_tumor.L002 | 79 | Cycle | Base Insertion | 26128 | 0.86 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 79 | Cycle | Base Deletion | 26128 | 1.52 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 8 | Cycle | Base Substitution | 27479 | 23.81 | 31.00 | 31.32 | -0.32 | Before |
| REGRESSION.HCC1395_tumor.L002 | 8 | Cycle | Base Insertion | 27479 | 0.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 8 | Cycle | Base Deletion | 27479 | 0.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 80 | Cycle | Base Substitution | 26195 | 42.28 | 29.00 | 30.90 | -1.90 | Before |
| REGRESSION.HCC1395_tumor.L002 | 80 | Cycle | Base Insertion | 26023 | 0.76 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 80 | Cycle | Base Deletion | 26023 | 1.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 81 | Cycle | Base Substitution | 26216 | 38.32 | 30.00 | 31.01 | -1.01 | Before |
| REGRESSION.HCC1395_tumor.L002 | 81 | Cycle | Base Insertion | 26032 | 0.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 81 | Cycle | Base Deletion | 26032 | 1.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 82 | Cycle | Base Substitution | 26145 | 41.81 | 29.00 | 30.88 | -1.88 | Before |
| REGRESSION.HCC1395_tumor.L002 | 82 | Cycle | Base Insertion | 25979 | 0.89 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 82 | Cycle | Base Deletion | 25979 | 1.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 83 | Cycle | Base Substitution | 26070 | 34.80 | 30.00 | 30.84 | -0.84 | Before |
| REGRESSION.HCC1395_tumor.L002 | 83 | Cycle | Base Insertion | 25900 | 0.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 83 | Cycle | Base Deletion | 25900 | 1.67 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 84 | Cycle | Base Substitution | 26121 | 39.30 | 29.00 | 30.82 | -1.82 | Before |
| REGRESSION.HCC1395_tumor.L002 | 84 | Cycle | Base Insertion | 25963 | 0.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 84 | Cycle | Base Deletion | 25963 | 1.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 85 | Cycle | Base Substitution | 26027 | 40.84 | 29.00 | 30.91 | -1.91 | Before |
| REGRESSION.HCC1395_tumor.L002 | 85 | Cycle | Base Insertion | 25847 | 0.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 85 | Cycle | Base Deletion | 25847 | 1.84 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 86 | Cycle | Base Substitution | 25997 | 47.22 | 29.00 | 30.77 | -1.77 | Before |
| REGRESSION.HCC1395_tumor.L002 | 86 | Cycle | Base Insertion | 25818 | 0.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 86 | Cycle | Base Deletion | 25818 | 2.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 87 | Cycle | Base Substitution | 26066 | 41.81 | 29.00 | 30.61 | -1.61 | Before |
| REGRESSION.HCC1395_tumor.L002 | 87 | Cycle | Base Insertion | 25872 | 0.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 87 | Cycle | Base Deletion | 25872 | 2.02 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 88 | Cycle | Base Substitution | 25908 | 27.95 | 30.00 | 30.76 | -0.76 | Before |
| REGRESSION.HCC1395_tumor.L002 | 88 | Cycle | Base Insertion | 25696 | 0.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 88 | Cycle | Base Deletion | 25696 | 1.81 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 89 | Cycle | Base Substitution | 25817 | 36.39 | 30.00 | 30.68 | -0.68 | Before |
| REGRESSION.HCC1395_tumor.L002 | 89 | Cycle | Base Insertion | 25604 | 0.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 89 | Cycle | Base Deletion | 25604 | 1.94 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 9 | Cycle | Base Substitution | 27347 | 29.66 | 31.00 | 31.16 | -0.16 | Before |
| REGRESSION.HCC1395_tumor.L002 | 9 | Cycle | Base Insertion | 27347 | 0.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 9 | Cycle | Base Deletion | 27347 | 0.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 90 | Cycle | Base Substitution | 25785 | 37.47 | 29.00 | 30.65 | -1.65 | Before |
| REGRESSION.HCC1395_tumor.L002 | 90 | Cycle | Base Insertion | 25570 | 0.12 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 90 | Cycle | Base Deletion | 25570 | 2.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 91 | Cycle | Base Substitution | 25646 | 45.88 | 29.00 | 30.45 | -1.45 | Before |
| REGRESSION.HCC1395_tumor.L002 | 91 | Cycle | Base Insertion | 25440 | 0.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 91 | Cycle | Base Deletion | 25440 | 1.69 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 92 | Cycle | Base Substitution | 25667 | 42.54 | 29.00 | 30.76 | -1.76 | Before |
| REGRESSION.HCC1395_tumor.L002 | 92 | Cycle | Base Insertion | 25463 | 0.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 92 | Cycle | Base Deletion | 25463 | 1.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 93 | Cycle | Base Substitution | 25670 | 42.99 | 29.00 | 30.57 | -1.57 | Before |
| REGRESSION.HCC1395_tumor.L002 | 93 | Cycle | Base Insertion | 25448 | 0.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 93 | Cycle | Base Deletion | 25448 | 1.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 94 | Cycle | Base Substitution | 25583 | 49.82 | 29.00 | 30.50 | -1.50 | Before |
| REGRESSION.HCC1395_tumor.L002 | 94 | Cycle | Base Insertion | 25357 | 0.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 94 | Cycle | Base Deletion | 25357 | 1.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 95 | Cycle | Base Substitution | 25565 | 34.22 | 30.00 | 30.65 | -0.65 | Before |
| REGRESSION.HCC1395_tumor.L002 | 95 | Cycle | Base Insertion | 25349 | 1.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 95 | Cycle | Base Deletion | 25349 | 1.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 96 | Cycle | Base Substitution | 25508 | 39.82 | 29.00 | 30.24 | -1.24 | Before |
| REGRESSION.HCC1395_tumor.L002 | 96 | Cycle | Base Insertion | 25269 | 0.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 96 | Cycle | Base Deletion | 25269 | 1.85 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 97 | Cycle | Base Substitution | 25423 | 37.56 | 29.00 | 30.31 | -1.31 | Before |
| REGRESSION.HCC1395_tumor.L002 | 97 | Cycle | Base Insertion | 25198 | 0.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 97 | Cycle | Base Deletion | 25198 | 1.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 98 | Cycle | Base Substitution | 25317 | 34.65 | 30.00 | 31.10 | -1.10 | Before |
| REGRESSION.HCC1395_tumor.L002 | 98 | Cycle | Base Insertion | 25071 | 0.76 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 98 | Cycle | Base Deletion | 25071 | 2.03 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 99 | Cycle | Base Substitution | 25243 | 37.91 | 29.00 | 30.95 | -1.95 | Before |
| REGRESSION.HCC1395_tumor.L002 | 99 | Cycle | Base Insertion | 24995 | 1.09 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 99 | Cycle | Base Deletion | 24995 | 2.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 12 | QualityScore | Base Substitution | 83564 | 8179.83 | 10.00 | 12.00 | -2.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 24 | QualityScore | Base Substitution | 201903 | 785.66 | 24.00 | 24.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 40 | QualityScore | Base Substitution | 7429196 | 5572.04 | 31.00 | 40.00 | -9.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 45 | QualityScore | Base Insertion | 7714663 | 157.44 | 46.00 | 45.00 | 1.00 | Before |
| REGRESSION.HCC1395_tumor.L002 | 45 | QualityScore | Base Deletion | 7714663 | 355.01 | 44.00 | 45.00 | -1.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | AA | Context | Base Substitution | 521797 | 1381.54 | 26.00 | 29.62 | -3.62 | Before |
| REGRESSION.HCC1395_tumor.L003 | AAA | Context | Base Insertion | 176360 | 22.61 | 44.00 | 45.00 | -1.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | AAA | Context | Base Deletion | 176360 | 67.77 | 42.00 | 45.00 | -3.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | AAC | Context | Base Insertion | 85172 | 0.75 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | AAC | Context | Base Deletion | 85172 | 1.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | AAG | Context | Base Insertion | 134811 | 0.79 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | AAG | Context | Base Deletion | 134811 | 4.75 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | AAT | Context | Base Insertion | 100091 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | AAT | Context | Base Deletion | 100091 | 1.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | AC | Context | Base Substitution | 358406 | 1112.21 | 25.00 | 28.73 | -3.73 | Before |
| REGRESSION.HCC1395_tumor.L003 | ACA | Context | Base Insertion | 132618 | 2.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | ACA | Context | Base Deletion | 132618 | 6.83 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | ACC | Context | Base Insertion | 105155 | 3.81 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | ACC | Context | Base Deletion | 105155 | 1.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | ACG | Context | Base Insertion | 20960 | 0.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | ACG | Context | Base Deletion | 20960 | 1.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | ACT | Context | Base Insertion | 105230 | 0.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | ACT | Context | Base Deletion | 105230 | 4.79 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | AG | Context | Base Substitution | 563621 | 554.52 | 30.00 | 31.76 | -1.76 | Before |
| REGRESSION.HCC1395_tumor.L003 | AGA | Context | Base Insertion | 152028 | 1.83 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | AGA | Context | Base Deletion | 152028 | 5.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | AGC | Context | Base Insertion | 140851 | 0.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | AGC | Context | Base Deletion | 140851 | 3.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | AGG | Context | Base Insertion | 164557 | 7.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | AGG | Context | Base Deletion | 164557 | 4.79 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | AGT | Context | Base Insertion | 102705 | 0.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | AGT | Context | Base Deletion | 102705 | 3.75 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | AT | Context | Base Substitution | 369121 | 488.37 | 29.00 | 32.06 | -3.06 | Before |
| REGRESSION.HCC1395_tumor.L003 | ATA | Context | Base Insertion | 74611 | 0.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | ATA | Context | Base Deletion | 74611 | 0.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | ATC | Context | Base Insertion | 79422 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | ATC | Context | Base Deletion | 79422 | 1.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | ATG | Context | Base Insertion | 114796 | 0.87 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | ATG | Context | Base Deletion | 114796 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | ATT | Context | Base Insertion | 107745 | 1.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | ATT | Context | Base Deletion | 107745 | 2.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | CA | Context | Base Substitution | 595115 | 1294.90 | 27.00 | 29.94 | -2.94 | Before |
| REGRESSION.HCC1395_tumor.L003 | CAA | Context | Base Insertion | 111958 | 3.78 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | CAA | Context | Base Deletion | 111958 | 3.57 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | CAC | Context | Base Insertion | 125974 | 4.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | CAC | Context | Base Deletion | 125974 | 7.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | CAG | Context | Base Insertion | 214048 | 5.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | CAG | Context | Base Deletion | 214048 | 10.96 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | CAT | Context | Base Insertion | 111853 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | CAT | Context | Base Deletion | 111853 | 2.74 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | CC | Context | Base Substitution | 555894 | 1764.57 | 25.00 | 28.86 | -3.86 | Before |
| REGRESSION.HCC1395_tumor.L003 | CCA | Context | Base Insertion | 177007 | 4.02 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | CCA | Context | Base Deletion | 177007 | 2.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | CCC | Context | Base Insertion | 153140 | 5.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | CCC | Context | Base Deletion | 153140 | 8.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | CCG | Context | Base Insertion | 38068 | 0.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | CCG | Context | Base Deletion | 38068 | 2.03 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | CCT | Context | Base Insertion | 179006 | 0.89 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | CCT | Context | Base Deletion | 179006 | 6.66 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | CG | Context | Base Substitution | 115335 | 360.58 | 26.00 | 29.58 | -3.58 | Before |
| REGRESSION.HCC1395_tumor.L003 | CGA | Context | Base Insertion | 44833 | 1.02 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | CGA | Context | Base Deletion | 44833 | 0.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | CGC | Context | Base Insertion | 64020 | 0.91 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | CGC | Context | Base Deletion | 64020 | 1.91 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | CGG | Context | Base Insertion | 78513 | 1.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | CGG | Context | Base Deletion | 78513 | 4.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | CGT | Context | Base Insertion | 49265 | 1.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | CGT | Context | Base Deletion | 49265 | 0.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | CT | Context | Base Substitution | 600017 | 420.88 | 32.00 | 32.45 | -0.45 | Before |
| REGRESSION.HCC1395_tumor.L003 | CTA | Context | Base Insertion | 58953 | 0.09 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | CTA | Context | Base Deletion | 58953 | 3.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | CTC | Context | Base Insertion | 147151 | 1.12 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | CTC | Context | Base Deletion | 147151 | 8.96 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | CTG | Context | Base Insertion | 214624 | 0.98 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | CTG | Context | Base Deletion | 214624 | 6.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | CTT | Context | Base Insertion | 147103 | 4.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | CTT | Context | Base Deletion | 147103 | 4.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | GA | Context | Base Substitution | 496311 | 856.67 | 28.00 | 29.67 | -1.67 | Before |
| REGRESSION.HCC1395_tumor.L003 | GAA | Context | Base Insertion | 141399 | 1.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | GAA | Context | Base Deletion | 141399 | 2.61 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | GAC | Context | Base Insertion | 84299 | 0.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | GAC | Context | Base Deletion | 84299 | 0.97 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | GAG | Context | Base Insertion | 149962 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | GAG | Context | Base Deletion | 149962 | 3.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | GAT | Context | Base Insertion | 83937 | 1.12 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | GAT | Context | Base Deletion | 83937 | 1.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | GC | Context | Base Substitution | 491262 | 1099.03 | 27.00 | 30.15 | -3.15 | Before |
| REGRESSION.HCC1395_tumor.L003 | GCA | Context | Base Insertion | 148493 | 2.95 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | GCA | Context | Base Deletion | 148493 | 4.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | GCC | Context | Base Insertion | 147740 | 1.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | GCC | Context | Base Deletion | 147740 | 5.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | GCG | Context | Base Insertion | 36546 | 1.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | GCG | Context | Base Deletion | 36546 | 1.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | GCT | Context | Base Insertion | 156881 | 3.12 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | GCT | Context | Base Deletion | 156881 | 1.85 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | GG | Context | Base Substitution | 580830 | 816.86 | 29.00 | 31.64 | -2.64 | Before |
| REGRESSION.HCC1395_tumor.L003 | GGA | Context | Base Insertion | 156846 | 0.96 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | GGA | Context | Base Deletion | 156846 | 6.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | GGC | Context | Base Insertion | 146535 | 2.01 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | GGC | Context | Base Deletion | 146535 | 6.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | GGG | Context | Base Insertion | 159389 | 4.12 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | GGG | Context | Base Deletion | 159389 | 12.87 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | GGT | Context | Base Insertion | 115745 | 1.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | GGT | Context | Base Deletion | 115745 | 0.75 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | GT | Context | Base Substitution | 409499 | 753.75 | 28.00 | 32.01 | -4.01 | Before |
| REGRESSION.HCC1395_tumor.L003 | GTA | Context | Base Insertion | 66869 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | GTA | Context | Base Deletion | 66869 | 0.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | GTC | Context | Base Insertion | 91503 | 0.52 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | GTC | Context | Base Deletion | 91503 | 0.99 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | GTG | Context | Base Insertion | 140387 | 1.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | GTG | Context | Base Deletion | 140387 | 7.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | GTT | Context | Base Insertion | 99772 | 0.79 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | GTT | Context | Base Deletion | 99772 | 1.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | TA | Context | Base Substitution | 289388 | 812.50 | 26.00 | 29.78 | -3.78 | Before |
| REGRESSION.HCC1395_tumor.L003 | TAA | Context | Base Insertion | 87525 | 1.73 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | TAA | Context | Base Deletion | 87525 | 3.61 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | TAC | Context | Base Insertion | 60632 | 0.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | TAC | Context | Base Deletion | 60632 | 3.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | TAG | Context | Base Insertion | 60463 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | TAG | Context | Base Deletion | 60463 | 0.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | TAT | Context | Base Insertion | 70455 | 0.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | TAT | Context | Base Deletion | 70455 | 0.84 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | TC | Context | Base Substitution | 450946 | 1083.37 | 26.00 | 30.45 | -4.45 | Before |
| REGRESSION.HCC1395_tumor.L003 | TCA | Context | Base Insertion | 132329 | 1.62 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | TCA | Context | Base Deletion | 132329 | 5.81 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | TCC | Context | Base Insertion | 146045 | 1.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | TCC | Context | Base Deletion | 146045 | 5.80 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | TCG | Context | Base Insertion | 18845 | 0.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | TCG | Context | Base Deletion | 18845 | 0.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | TCT | Context | Base Insertion | 154780 | 2.66 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | TCT | Context | Base Deletion | 154780 | 6.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | TG | Context | Base Substitution | 588375 | 477.54 | 31.00 | 31.83 | -0.83 | Before |
| REGRESSION.HCC1395_tumor.L003 | TGA | Context | Base Insertion | 138762 | 1.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | TGA | Context | Base Deletion | 138762 | 0.94 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | TGC | Context | Base Insertion | 136661 | 1.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | TGC | Context | Base Deletion | 136661 | 2.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | TGG | Context | Base Insertion | 174183 | 0.77 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | TGG | Context | Base Deletion | 174183 | 3.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | TGT | Context | Base Insertion | 139049 | 1.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | TGT | Context | Base Deletion | 139049 | 6.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | TT | Context | Base Substitution | 538521 | 705.00 | 29.00 | 32.80 | -3.80 | Before |
| REGRESSION.HCC1395_tumor.L003 | TTA | Context | Base Insertion | 86747 | 2.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | TTA | Context | Base Deletion | 86747 | 3.61 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | TTC | Context | Base Insertion | 130135 | 2.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | TTC | Context | Base Deletion | 130135 | 7.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | TTG | Context | Base Insertion | 114378 | 0.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | TTG | Context | Base Deletion | 114378 | 2.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | TTT | Context | Base Insertion | 180221 | 26.91 | 44.00 | 45.00 | -1.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | TTT | Context | Base Deletion | 180221 | 48.16 | 43.00 | 45.00 | -2.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -1 | Cycle | Base Substitution | 26670 | 79.21 | 25.00 | 25.89 | -0.89 | Before |
| REGRESSION.HCC1395_tumor.L003 | -10 | Cycle | Base Substitution | 26887 | 34.40 | 30.00 | 31.52 | -1.52 | Before |
| REGRESSION.HCC1395_tumor.L003 | -10 | Cycle | Base Insertion | 26887 | 0.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -10 | Cycle | Base Deletion | 26887 | 0.98 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -100 | Cycle | Base Substitution | 24860 | 56.20 | 29.00 | 30.19 | -1.19 | Before |
| REGRESSION.HCC1395_tumor.L003 | -100 | Cycle | Base Insertion | 24620 | 0.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -100 | Cycle | Base Deletion | 24620 | 1.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -101 | Cycle | Base Substitution | 24843 | 53.72 | 28.00 | 30.00 | -2.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -101 | Cycle | Base Insertion | 24591 | 0.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -101 | Cycle | Base Deletion | 24591 | 1.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -102 | Cycle | Base Substitution | 24703 | 52.31 | 29.00 | 30.15 | -1.15 | Before |
| REGRESSION.HCC1395_tumor.L003 | -102 | Cycle | Base Insertion | 24458 | 0.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -102 | Cycle | Base Deletion | 24458 | 1.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -103 | Cycle | Base Substitution | 24702 | 40.94 | 29.00 | 30.33 | -1.33 | Before |
| REGRESSION.HCC1395_tumor.L003 | -103 | Cycle | Base Insertion | 24449 | 0.80 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -103 | Cycle | Base Deletion | 24449 | 1.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -104 | Cycle | Base Substitution | 24619 | 45.65 | 29.00 | 30.14 | -1.14 | Before |
| REGRESSION.HCC1395_tumor.L003 | -104 | Cycle | Base Insertion | 24377 | 0.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -104 | Cycle | Base Deletion | 24377 | 1.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -105 | Cycle | Base Substitution | 24535 | 54.95 | 28.00 | 29.78 | -1.78 | Before |
| REGRESSION.HCC1395_tumor.L003 | -105 | Cycle | Base Insertion | 24280 | 0.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -105 | Cycle | Base Deletion | 24280 | 1.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -106 | Cycle | Base Substitution | 24452 | 51.56 | 29.00 | 30.09 | -1.09 | Before |
| REGRESSION.HCC1395_tumor.L003 | -106 | Cycle | Base Insertion | 24207 | 1.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -106 | Cycle | Base Deletion | 24207 | 1.66 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -107 | Cycle | Base Substitution | 24454 | 49.21 | 28.00 | 29.72 | -1.72 | Before |
| REGRESSION.HCC1395_tumor.L003 | -107 | Cycle | Base Insertion | 24204 | 0.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -107 | Cycle | Base Deletion | 24204 | 1.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -108 | Cycle | Base Substitution | 24411 | 48.35 | 28.00 | 29.91 | -1.91 | Before |
| REGRESSION.HCC1395_tumor.L003 | -108 | Cycle | Base Insertion | 24144 | 0.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -108 | Cycle | Base Deletion | 24144 | 0.80 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -109 | Cycle | Base Substitution | 24382 | 57.07 | 28.00 | 29.86 | -1.86 | Before |
| REGRESSION.HCC1395_tumor.L003 | -109 | Cycle | Base Insertion | 24109 | 0.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -109 | Cycle | Base Deletion | 24109 | 1.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -11 | Cycle | Base Substitution | 26958 | 28.26 | 31.00 | 31.84 | -0.84 | Before |
| REGRESSION.HCC1395_tumor.L003 | -11 | Cycle | Base Insertion | 26958 | 0.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -11 | Cycle | Base Deletion | 26958 | 0.85 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -110 | Cycle | Base Substitution | 24317 | 58.60 | 28.00 | 29.90 | -1.90 | Before |
| REGRESSION.HCC1395_tumor.L003 | -110 | Cycle | Base Insertion | 24042 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -110 | Cycle | Base Deletion | 24042 | 1.12 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -111 | Cycle | Base Substitution | 24192 | 55.40 | 29.00 | 30.08 | -1.08 | Before |
| REGRESSION.HCC1395_tumor.L003 | -111 | Cycle | Base Insertion | 23913 | 0.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -111 | Cycle | Base Deletion | 23913 | 1.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -112 | Cycle | Base Substitution | 24139 | 51.17 | 28.00 | 29.88 | -1.88 | Before |
| REGRESSION.HCC1395_tumor.L003 | -112 | Cycle | Base Insertion | 23862 | 0.52 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -112 | Cycle | Base Deletion | 23862 | 1.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -113 | Cycle | Base Substitution | 24128 | 51.67 | 28.00 | 29.84 | -1.84 | Before |
| REGRESSION.HCC1395_tumor.L003 | -113 | Cycle | Base Insertion | 23856 | 0.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -113 | Cycle | Base Deletion | 23856 | 1.03 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -114 | Cycle | Base Substitution | 24029 | 52.31 | 29.00 | 30.30 | -1.30 | Before |
| REGRESSION.HCC1395_tumor.L003 | -114 | Cycle | Base Insertion | 23766 | 0.61 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -114 | Cycle | Base Deletion | 23766 | 1.83 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -115 | Cycle | Base Substitution | 23876 | 50.84 | 28.00 | 29.93 | -1.93 | Before |
| REGRESSION.HCC1395_tumor.L003 | -115 | Cycle | Base Insertion | 23599 | 0.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -115 | Cycle | Base Deletion | 23599 | 2.04 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -116 | Cycle | Base Substitution | 23950 | 62.64 | 28.00 | 29.86 | -1.86 | Before |
| REGRESSION.HCC1395_tumor.L003 | -116 | Cycle | Base Insertion | 23684 | 0.67 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -116 | Cycle | Base Deletion | 23684 | 1.84 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -117 | Cycle | Base Substitution | 23742 | 55.52 | 28.00 | 29.78 | -1.78 | Before |
| REGRESSION.HCC1395_tumor.L003 | -117 | Cycle | Base Insertion | 23461 | 0.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -117 | Cycle | Base Deletion | 23461 | 1.87 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -118 | Cycle | Base Substitution | 23626 | 42.78 | 29.00 | 30.27 | -1.27 | Before |
| REGRESSION.HCC1395_tumor.L003 | -118 | Cycle | Base Insertion | 23335 | 0.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -118 | Cycle | Base Deletion | 23335 | 1.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -119 | Cycle | Base Substitution | 23648 | 47.61 | 29.00 | 30.13 | -1.13 | Before |
| REGRESSION.HCC1395_tumor.L003 | -119 | Cycle | Base Insertion | 23367 | 1.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -119 | Cycle | Base Deletion | 23367 | 1.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -12 | Cycle | Base Substitution | 27000 | 43.78 | 30.00 | 31.63 | -1.63 | Before |
| REGRESSION.HCC1395_tumor.L003 | -12 | Cycle | Base Insertion | 27000 | 0.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -12 | Cycle | Base Deletion | 27000 | 1.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -120 | Cycle | Base Substitution | 23633 | 51.04 | 28.00 | 29.82 | -1.82 | Before |
| REGRESSION.HCC1395_tumor.L003 | -120 | Cycle | Base Insertion | 23355 | 0.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -120 | Cycle | Base Deletion | 23355 | 1.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -121 | Cycle | Base Substitution | 23622 | 49.58 | 28.00 | 29.67 | -1.67 | Before |
| REGRESSION.HCC1395_tumor.L003 | -121 | Cycle | Base Insertion | 23321 | 0.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -121 | Cycle | Base Deletion | 23321 | 1.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -122 | Cycle | Base Substitution | 23515 | 57.70 | 28.00 | 29.79 | -1.79 | Before |
| REGRESSION.HCC1395_tumor.L003 | -122 | Cycle | Base Insertion | 23228 | 0.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -122 | Cycle | Base Deletion | 23228 | 1.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -123 | Cycle | Base Substitution | 23356 | 36.42 | 29.00 | 29.61 | -0.61 | Before |
| REGRESSION.HCC1395_tumor.L003 | -123 | Cycle | Base Insertion | 23055 | 0.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -123 | Cycle | Base Deletion | 23055 | 1.60 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -124 | Cycle | Base Substitution | 23252 | 55.39 | 28.00 | 29.48 | -1.48 | Before |
| REGRESSION.HCC1395_tumor.L003 | -124 | Cycle | Base Insertion | 22944 | 0.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -124 | Cycle | Base Deletion | 22944 | 1.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -125 | Cycle | Base Substitution | 23339 | 44.82 | 28.00 | 29.52 | -1.52 | Before |
| REGRESSION.HCC1395_tumor.L003 | -125 | Cycle | Base Insertion | 23018 | 0.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -125 | Cycle | Base Deletion | 23018 | 1.85 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -126 | Cycle | Base Substitution | 23289 | 50.09 | 29.00 | 30.05 | -1.05 | Before |
| REGRESSION.HCC1395_tumor.L003 | -126 | Cycle | Base Insertion | 22964 | 0.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -126 | Cycle | Base Deletion | 22964 | 1.91 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -127 | Cycle | Base Substitution | 23237 | 37.17 | 29.00 | 30.04 | -1.04 | Before |
| REGRESSION.HCC1395_tumor.L003 | -127 | Cycle | Base Insertion | 22914 | 0.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -127 | Cycle | Base Deletion | 22914 | 1.09 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -128 | Cycle | Base Substitution | 23128 | 54.04 | 28.00 | 29.86 | -1.86 | Before |
| REGRESSION.HCC1395_tumor.L003 | -128 | Cycle | Base Insertion | 22821 | 0.97 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -128 | Cycle | Base Deletion | 22821 | 0.98 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -129 | Cycle | Base Substitution | 23051 | 47.51 | 28.00 | 29.77 | -1.77 | Before |
| REGRESSION.HCC1395_tumor.L003 | -129 | Cycle | Base Insertion | 22735 | 1.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -129 | Cycle | Base Deletion | 22735 | 0.98 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -13 | Cycle | Base Substitution | 26993 | 36.75 | 30.00 | 31.88 | -1.88 | Before |
| REGRESSION.HCC1395_tumor.L003 | -13 | Cycle | Base Insertion | 26993 | 0.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -13 | Cycle | Base Deletion | 26993 | 1.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -130 | Cycle | Base Substitution | 23041 | 42.01 | 28.00 | 29.71 | -1.71 | Before |
| REGRESSION.HCC1395_tumor.L003 | -130 | Cycle | Base Insertion | 22731 | 0.81 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -130 | Cycle | Base Deletion | 22731 | 1.07 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -131 | Cycle | Base Substitution | 22899 | 42.22 | 28.00 | 29.32 | -1.32 | Before |
| REGRESSION.HCC1395_tumor.L003 | -131 | Cycle | Base Insertion | 22594 | 0.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -131 | Cycle | Base Deletion | 22594 | 1.07 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -132 | Cycle | Base Substitution | 22930 | 38.06 | 29.00 | 30.04 | -1.04 | Before |
| REGRESSION.HCC1395_tumor.L003 | -132 | Cycle | Base Insertion | 22597 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -132 | Cycle | Base Deletion | 22597 | 0.81 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -133 | Cycle | Base Substitution | 22805 | 52.81 | 28.00 | 29.85 | -1.85 | Before |
| REGRESSION.HCC1395_tumor.L003 | -133 | Cycle | Base Insertion | 22457 | 0.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -133 | Cycle | Base Deletion | 22457 | 1.09 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -134 | Cycle | Base Substitution | 22672 | 37.44 | 29.00 | 30.00 | -1.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -134 | Cycle | Base Insertion | 22330 | 0.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -134 | Cycle | Base Deletion | 22330 | 0.93 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -135 | Cycle | Base Substitution | 22679 | 57.16 | 28.00 | 29.88 | -1.88 | Before |
| REGRESSION.HCC1395_tumor.L003 | -135 | Cycle | Base Insertion | 22347 | 0.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -135 | Cycle | Base Deletion | 22347 | 1.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -136 | Cycle | Base Substitution | 22619 | 52.39 | 28.00 | 29.58 | -1.58 | Before |
| REGRESSION.HCC1395_tumor.L003 | -136 | Cycle | Base Insertion | 22253 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -136 | Cycle | Base Deletion | 22253 | 0.96 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -137 | Cycle | Base Substitution | 22549 | 52.89 | 28.00 | 29.68 | -1.68 | Before |
| REGRESSION.HCC1395_tumor.L003 | -137 | Cycle | Base Insertion | 22179 | 0.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -137 | Cycle | Base Deletion | 22179 | 0.52 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -138 | Cycle | Base Substitution | 22462 | 52.01 | 28.00 | 29.86 | -1.86 | Before |
| REGRESSION.HCC1395_tumor.L003 | -138 | Cycle | Base Insertion | 22086 | 0.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -138 | Cycle | Base Deletion | 22086 | 0.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -139 | Cycle | Base Substitution | 22280 | 42.58 | 28.00 | 29.93 | -1.93 | Before |
| REGRESSION.HCC1395_tumor.L003 | -139 | Cycle | Base Insertion | 21889 | 0.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -139 | Cycle | Base Deletion | 21889 | 0.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -14 | Cycle | Base Substitution | 26955 | 32.04 | 30.00 | 31.84 | -1.84 | Before |
| REGRESSION.HCC1395_tumor.L003 | -14 | Cycle | Base Insertion | 26955 | 0.97 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -14 | Cycle | Base Deletion | 26955 | 1.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -140 | Cycle | Base Substitution | 22170 | 41.85 | 29.00 | 30.16 | -1.16 | Before |
| REGRESSION.HCC1395_tumor.L003 | -140 | Cycle | Base Insertion | 21793 | 0.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -140 | Cycle | Base Deletion | 21793 | 0.67 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -141 | Cycle | Base Substitution | 22115 | 36.65 | 29.00 | 29.98 | -0.98 | Before |
| REGRESSION.HCC1395_tumor.L003 | -141 | Cycle | Base Insertion | 21709 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -141 | Cycle | Base Deletion | 21709 | 0.67 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -142 | Cycle | Base Substitution | 22106 | 33.78 | 29.00 | 29.83 | -0.83 | Before |
| REGRESSION.HCC1395_tumor.L003 | -142 | Cycle | Base Insertion | 21668 | 1.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -142 | Cycle | Base Deletion | 21668 | 0.75 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -143 | Cycle | Base Substitution | 22072 | 34.57 | 29.00 | 29.87 | -0.87 | Before |
| REGRESSION.HCC1395_tumor.L003 | -143 | Cycle | Base Insertion | 21619 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -143 | Cycle | Base Deletion | 21619 | 0.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -144 | Cycle | Base Substitution | 21803 | 36.24 | 29.00 | 29.96 | -0.96 | Before |
| REGRESSION.HCC1395_tumor.L003 | -144 | Cycle | Base Insertion | 21313 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -144 | Cycle | Base Deletion | 21313 | 0.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -145 | Cycle | Base Substitution | 21689 | 40.95 | 29.00 | 30.03 | -1.03 | Before |
| REGRESSION.HCC1395_tumor.L003 | -145 | Cycle | Base Insertion | 16677 | 1.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -145 | Cycle | Base Deletion | 16677 | 0.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -146 | Cycle | Base Substitution | 21594 | 74.33 | 27.00 | 29.88 | -2.88 | Before |
| REGRESSION.HCC1395_tumor.L003 | -146 | Cycle | Base Insertion | 16626 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -146 | Cycle | Base Deletion | 16626 | 0.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -147 | Cycle | Base Substitution | 21485 | 232.53 | 23.00 | 30.19 | -7.19 | Before |
| REGRESSION.HCC1395_tumor.L003 | -148 | Cycle | Base Substitution | 21344 | 882.56 | 15.00 | 29.90 | -14.90 | Before |
| REGRESSION.HCC1395_tumor.L003 | -149 | Cycle | Base Substitution | 13241 | 811.90 | 14.00 | 30.84 | -16.84 | Before |
| REGRESSION.HCC1395_tumor.L003 | -15 | Cycle | Base Substitution | 27077 | 35.14 | 30.00 | 31.72 | -1.72 | Before |
| REGRESSION.HCC1395_tumor.L003 | -15 | Cycle | Base Insertion | 27077 | 1.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -15 | Cycle | Base Deletion | 27077 | 2.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -150 | Cycle | Base Substitution | 4630 | 8.75 | 30.00 | 30.14 | -0.14 | Before |
| REGRESSION.HCC1395_tumor.L003 | -16 | Cycle | Base Substitution | 26998 | 42.75 | 30.00 | 31.54 | -1.54 | Before |
| REGRESSION.HCC1395_tumor.L003 | -16 | Cycle | Base Insertion | 26998 | 1.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -16 | Cycle | Base Deletion | 26998 | 1.99 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -17 | Cycle | Base Substitution | 27070 | 41.21 | 30.00 | 31.76 | -1.76 | Before |
| REGRESSION.HCC1395_tumor.L003 | -17 | Cycle | Base Insertion | 27070 | 0.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -17 | Cycle | Base Deletion | 27070 | 1.66 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -18 | Cycle | Base Substitution | 26955 | 44.44 | 30.00 | 31.58 | -1.58 | Before |
| REGRESSION.HCC1395_tumor.L003 | -18 | Cycle | Base Insertion | 26955 | 0.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -18 | Cycle | Base Deletion | 26955 | 1.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -19 | Cycle | Base Substitution | 26916 | 43.15 | 30.00 | 31.36 | -1.36 | Before |
| REGRESSION.HCC1395_tumor.L003 | -19 | Cycle | Base Insertion | 26916 | 0.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -19 | Cycle | Base Deletion | 26916 | 2.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -2 | Cycle | Base Substitution | 27172 | 71.02 | 27.00 | 28.49 | -1.49 | Before |
| REGRESSION.HCC1395_tumor.L003 | -20 | Cycle | Base Substitution | 26967 | 30.90 | 31.00 | 31.74 | -0.74 | Before |
| REGRESSION.HCC1395_tumor.L003 | -20 | Cycle | Base Insertion | 26967 | 0.60 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -20 | Cycle | Base Deletion | 26967 | 1.82 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -21 | Cycle | Base Substitution | 26923 | 23.79 | 32.00 | 32.08 | -0.08 | Before |
| REGRESSION.HCC1395_tumor.L003 | -21 | Cycle | Base Insertion | 26923 | 0.66 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -21 | Cycle | Base Deletion | 26923 | 1.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -22 | Cycle | Base Substitution | 26922 | 35.55 | 30.00 | 31.88 | -1.88 | Before |
| REGRESSION.HCC1395_tumor.L003 | -22 | Cycle | Base Insertion | 26922 | 1.07 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -22 | Cycle | Base Deletion | 26922 | 1.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -23 | Cycle | Base Substitution | 26980 | 28.11 | 31.00 | 31.78 | -0.78 | Before |
| REGRESSION.HCC1395_tumor.L003 | -23 | Cycle | Base Insertion | 26980 | 1.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -23 | Cycle | Base Deletion | 26980 | 2.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -24 | Cycle | Base Substitution | 27021 | 35.22 | 30.00 | 31.43 | -1.43 | Before |
| REGRESSION.HCC1395_tumor.L003 | -24 | Cycle | Base Insertion | 27021 | 1.03 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -24 | Cycle | Base Deletion | 27021 | 2.12 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -25 | Cycle | Base Substitution | 26985 | 34.86 | 30.00 | 31.43 | -1.43 | Before |
| REGRESSION.HCC1395_tumor.L003 | -25 | Cycle | Base Insertion | 26985 | 0.76 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -25 | Cycle | Base Deletion | 26985 | 2.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -26 | Cycle | Base Substitution | 26815 | 40.79 | 29.00 | 30.21 | -1.21 | Before |
| REGRESSION.HCC1395_tumor.L003 | -26 | Cycle | Base Insertion | 26815 | 0.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -26 | Cycle | Base Deletion | 26815 | 2.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -27 | Cycle | Base Substitution | 26811 | 34.88 | 30.00 | 30.04 | -0.04 | Before |
| REGRESSION.HCC1395_tumor.L003 | -27 | Cycle | Base Insertion | 26811 | 0.57 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -27 | Cycle | Base Deletion | 26811 | 2.02 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -28 | Cycle | Base Substitution | 26840 | 56.89 | 29.00 | 30.34 | -1.34 | Before |
| REGRESSION.HCC1395_tumor.L003 | -28 | Cycle | Base Insertion | 26840 | 0.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -28 | Cycle | Base Deletion | 26840 | 1.82 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -29 | Cycle | Base Substitution | 26791 | 41.06 | 29.00 | 30.19 | -1.19 | Before |
| REGRESSION.HCC1395_tumor.L003 | -29 | Cycle | Base Insertion | 26791 | 0.80 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -29 | Cycle | Base Deletion | 26791 | 1.99 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -3 | Cycle | Base Substitution | 27165 | 69.60 | 28.00 | 29.77 | -1.77 | Before |
| REGRESSION.HCC1395_tumor.L003 | -30 | Cycle | Base Substitution | 26825 | 38.63 | 29.00 | 30.39 | -1.39 | Before |
| REGRESSION.HCC1395_tumor.L003 | -30 | Cycle | Base Insertion | 26823 | 0.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -30 | Cycle | Base Deletion | 26823 | 1.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -31 | Cycle | Base Substitution | 26846 | 35.74 | 30.00 | 30.39 | -0.39 | Before |
| REGRESSION.HCC1395_tumor.L003 | -31 | Cycle | Base Insertion | 26844 | 0.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -31 | Cycle | Base Deletion | 26844 | 2.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -32 | Cycle | Base Substitution | 26960 | 33.21 | 30.00 | 30.28 | -0.28 | Before |
| REGRESSION.HCC1395_tumor.L003 | -32 | Cycle | Base Insertion | 26957 | 0.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -32 | Cycle | Base Deletion | 26957 | 2.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -33 | Cycle | Base Substitution | 26805 | 34.89 | 30.00 | 30.79 | -0.79 | Before |
| REGRESSION.HCC1395_tumor.L003 | -33 | Cycle | Base Insertion | 26803 | 0.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -33 | Cycle | Base Deletion | 26803 | 2.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -34 | Cycle | Base Substitution | 26769 | 30.29 | 30.00 | 30.35 | -0.35 | Before |
| REGRESSION.HCC1395_tumor.L003 | -34 | Cycle | Base Insertion | 26768 | 0.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -34 | Cycle | Base Deletion | 26768 | 1.88 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -35 | Cycle | Base Substitution | 26817 | 35.81 | 30.00 | 30.65 | -0.65 | Before |
| REGRESSION.HCC1395_tumor.L003 | -35 | Cycle | Base Insertion | 26817 | 0.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -35 | Cycle | Base Deletion | 26817 | 1.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -36 | Cycle | Base Substitution | 26831 | 39.16 | 29.00 | 30.26 | -1.26 | Before |
| REGRESSION.HCC1395_tumor.L003 | -36 | Cycle | Base Insertion | 26831 | 0.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -36 | Cycle | Base Deletion | 26831 | 1.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -37 | Cycle | Base Substitution | 26701 | 50.30 | 29.00 | 30.15 | -1.15 | Before |
| REGRESSION.HCC1395_tumor.L003 | -37 | Cycle | Base Insertion | 26701 | 0.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -37 | Cycle | Base Deletion | 26701 | 0.89 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -38 | Cycle | Base Substitution | 26762 | 42.85 | 29.00 | 30.40 | -1.40 | Before |
| REGRESSION.HCC1395_tumor.L003 | -38 | Cycle | Base Insertion | 26762 | 0.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -38 | Cycle | Base Deletion | 26762 | 1.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -39 | Cycle | Base Substitution | 26755 | 32.92 | 30.00 | 30.24 | -0.24 | Before |
| REGRESSION.HCC1395_tumor.L003 | -39 | Cycle | Base Insertion | 26753 | 0.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -39 | Cycle | Base Deletion | 26753 | 1.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -4 | Cycle | Base Substitution | 27051 | 70.94 | 28.00 | 30.13 | -2.13 | Before |
| REGRESSION.HCC1395_tumor.L003 | -40 | Cycle | Base Substitution | 26847 | 49.03 | 29.00 | 30.14 | -1.14 | Before |
| REGRESSION.HCC1395_tumor.L003 | -40 | Cycle | Base Insertion | 26845 | 0.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -40 | Cycle | Base Deletion | 26845 | 2.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -41 | Cycle | Base Substitution | 26602 | 43.40 | 29.00 | 30.31 | -1.31 | Before |
| REGRESSION.HCC1395_tumor.L003 | -41 | Cycle | Base Insertion | 26601 | 0.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -41 | Cycle | Base Deletion | 26601 | 1.95 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -42 | Cycle | Base Substitution | 26575 | 25.20 | 30.00 | 30.28 | -0.28 | Before |
| REGRESSION.HCC1395_tumor.L003 | -42 | Cycle | Base Insertion | 26573 | 0.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -42 | Cycle | Base Deletion | 26573 | 1.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -43 | Cycle | Base Substitution | 26744 | 36.65 | 30.00 | 30.64 | -0.64 | Before |
| REGRESSION.HCC1395_tumor.L003 | -43 | Cycle | Base Insertion | 26741 | 0.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -43 | Cycle | Base Deletion | 26741 | 1.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -44 | Cycle | Base Substitution | 26660 | 30.25 | 30.00 | 30.18 | -0.18 | Before |
| REGRESSION.HCC1395_tumor.L003 | -44 | Cycle | Base Insertion | 26658 | 0.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -44 | Cycle | Base Deletion | 26658 | 1.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -45 | Cycle | Base Substitution | 26817 | 30.76 | 30.00 | 30.68 | -0.68 | Before |
| REGRESSION.HCC1395_tumor.L003 | -45 | Cycle | Base Insertion | 26814 | 0.69 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -45 | Cycle | Base Deletion | 26814 | 1.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -46 | Cycle | Base Substitution | 26616 | 35.11 | 30.00 | 30.79 | -0.79 | Before |
| REGRESSION.HCC1395_tumor.L003 | -46 | Cycle | Base Insertion | 26614 | 0.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -46 | Cycle | Base Deletion | 26614 | 1.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -47 | Cycle | Base Substitution | 26699 | 44.58 | 29.00 | 30.33 | -1.33 | Before |
| REGRESSION.HCC1395_tumor.L003 | -47 | Cycle | Base Insertion | 26697 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -47 | Cycle | Base Deletion | 26697 | 1.12 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -48 | Cycle | Base Substitution | 26659 | 32.25 | 30.00 | 30.45 | -0.45 | Before |
| REGRESSION.HCC1395_tumor.L003 | -48 | Cycle | Base Insertion | 26656 | 0.67 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -48 | Cycle | Base Deletion | 26656 | 1.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -49 | Cycle | Base Substitution | 26640 | 46.38 | 29.00 | 30.62 | -1.62 | Before |
| REGRESSION.HCC1395_tumor.L003 | -49 | Cycle | Base Insertion | 26632 | 0.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -49 | Cycle | Base Deletion | 26632 | 1.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -5 | Cycle | Base Substitution | 27144 | 49.07 | 29.00 | 30.39 | -1.39 | Before |
| REGRESSION.HCC1395_tumor.L003 | -5 | Cycle | Base Insertion | 27144 | 1.02 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -5 | Cycle | Base Deletion | 27144 | 0.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -50 | Cycle | Base Substitution | 26659 | 32.07 | 30.00 | 30.76 | -0.76 | Before |
| REGRESSION.HCC1395_tumor.L003 | -50 | Cycle | Base Insertion | 26653 | 0.81 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -50 | Cycle | Base Deletion | 26653 | 0.98 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -51 | Cycle | Base Substitution | 26589 | 38.37 | 29.00 | 30.52 | -1.52 | Before |
| REGRESSION.HCC1395_tumor.L003 | -51 | Cycle | Base Insertion | 26577 | 0.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -51 | Cycle | Base Deletion | 26577 | 0.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -52 | Cycle | Base Substitution | 26561 | 28.55 | 30.00 | 30.62 | -0.62 | Before |
| REGRESSION.HCC1395_tumor.L003 | -52 | Cycle | Base Insertion | 26547 | 0.82 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -52 | Cycle | Base Deletion | 26547 | 0.65 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -53 | Cycle | Base Substitution | 26462 | 31.93 | 30.00 | 30.63 | -0.63 | Before |
| REGRESSION.HCC1395_tumor.L003 | -53 | Cycle | Base Insertion | 26443 | 0.86 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -53 | Cycle | Base Deletion | 26443 | 0.95 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -54 | Cycle | Base Substitution | 26529 | 42.66 | 29.00 | 30.41 | -1.41 | Before |
| REGRESSION.HCC1395_tumor.L003 | -54 | Cycle | Base Insertion | 26505 | 2.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -54 | Cycle | Base Deletion | 26505 | 0.74 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -55 | Cycle | Base Substitution | 26559 | 42.75 | 29.00 | 30.46 | -1.46 | Before |
| REGRESSION.HCC1395_tumor.L003 | -55 | Cycle | Base Insertion | 26530 | 0.74 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -55 | Cycle | Base Deletion | 26530 | 0.73 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -56 | Cycle | Base Substitution | 26459 | 37.18 | 30.00 | 30.33 | -0.33 | Before |
| REGRESSION.HCC1395_tumor.L003 | -56 | Cycle | Base Insertion | 26427 | 0.66 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -56 | Cycle | Base Deletion | 26427 | 0.87 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -57 | Cycle | Base Substitution | 26513 | 31.84 | 30.00 | 30.80 | -0.80 | Before |
| REGRESSION.HCC1395_tumor.L003 | -57 | Cycle | Base Insertion | 26474 | 0.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -57 | Cycle | Base Deletion | 26474 | 0.83 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -58 | Cycle | Base Substitution | 26495 | 34.06 | 30.00 | 30.92 | -0.92 | Before |
| REGRESSION.HCC1395_tumor.L003 | -58 | Cycle | Base Insertion | 26452 | 0.61 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -58 | Cycle | Base Deletion | 26452 | 1.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -59 | Cycle | Base Substitution | 26605 | 38.99 | 29.00 | 30.50 | -1.50 | Before |
| REGRESSION.HCC1395_tumor.L003 | -59 | Cycle | Base Insertion | 26556 | 0.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -59 | Cycle | Base Deletion | 26556 | 1.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -6 | Cycle | Base Substitution | 26986 | 49.86 | 29.00 | 30.58 | -1.58 | Before |
| REGRESSION.HCC1395_tumor.L003 | -6 | Cycle | Base Insertion | 26986 | 0.12 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -6 | Cycle | Base Deletion | 26986 | 0.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -60 | Cycle | Base Substitution | 26537 | 44.02 | 29.00 | 30.52 | -1.52 | Before |
| REGRESSION.HCC1395_tumor.L003 | -60 | Cycle | Base Insertion | 26487 | 0.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -60 | Cycle | Base Deletion | 26487 | 1.21 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -61 | Cycle | Base Substitution | 26273 | 31.65 | 30.00 | 30.64 | -0.64 | Before |
| REGRESSION.HCC1395_tumor.L003 | -61 | Cycle | Base Insertion | 26220 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -61 | Cycle | Base Deletion | 26220 | 1.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -62 | Cycle | Base Substitution | 26336 | 33.96 | 30.00 | 30.99 | -0.99 | Before |
| REGRESSION.HCC1395_tumor.L003 | -62 | Cycle | Base Insertion | 26280 | 0.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -62 | Cycle | Base Deletion | 26280 | 1.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -63 | Cycle | Base Substitution | 26443 | 43.66 | 29.00 | 30.68 | -1.68 | Before |
| REGRESSION.HCC1395_tumor.L003 | -63 | Cycle | Base Insertion | 26377 | 0.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -63 | Cycle | Base Deletion | 26377 | 1.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -64 | Cycle | Base Substitution | 26484 | 42.73 | 29.00 | 30.53 | -1.53 | Before |
| REGRESSION.HCC1395_tumor.L003 | -64 | Cycle | Base Insertion | 26412 | 0.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -64 | Cycle | Base Deletion | 26412 | 1.12 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -65 | Cycle | Base Substitution | 26468 | 31.30 | 30.00 | 30.95 | -0.95 | Before |
| REGRESSION.HCC1395_tumor.L003 | -65 | Cycle | Base Insertion | 26381 | 1.03 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -65 | Cycle | Base Deletion | 26381 | 1.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -66 | Cycle | Base Substitution | 26567 | 45.10 | 29.00 | 30.28 | -1.28 | Before |
| REGRESSION.HCC1395_tumor.L003 | -66 | Cycle | Base Insertion | 26478 | 1.88 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -66 | Cycle | Base Deletion | 26478 | 1.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -67 | Cycle | Base Substitution | 26298 | 37.15 | 30.00 | 30.52 | -0.52 | Before |
| REGRESSION.HCC1395_tumor.L003 | -67 | Cycle | Base Insertion | 26218 | 1.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -67 | Cycle | Base Deletion | 26218 | 1.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -68 | Cycle | Base Substitution | 26388 | 41.57 | 29.00 | 30.55 | -1.55 | Before |
| REGRESSION.HCC1395_tumor.L003 | -68 | Cycle | Base Insertion | 26295 | 0.77 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -68 | Cycle | Base Deletion | 26295 | 1.69 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -69 | Cycle | Base Substitution | 26319 | 38.70 | 29.00 | 30.47 | -1.47 | Before |
| REGRESSION.HCC1395_tumor.L003 | -69 | Cycle | Base Insertion | 26218 | 0.73 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -69 | Cycle | Base Deletion | 26218 | 1.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -7 | Cycle | Base Substitution | 26946 | 48.29 | 29.00 | 30.54 | -1.54 | Before |
| REGRESSION.HCC1395_tumor.L003 | -7 | Cycle | Base Insertion | 26946 | 0.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -7 | Cycle | Base Deletion | 26946 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -70 | Cycle | Base Substitution | 26405 | 41.71 | 29.00 | 30.66 | -1.66 | Before |
| REGRESSION.HCC1395_tumor.L003 | -70 | Cycle | Base Insertion | 26306 | 0.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -70 | Cycle | Base Deletion | 26306 | 1.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -71 | Cycle | Base Substitution | 26331 | 44.90 | 29.00 | 30.24 | -1.24 | Before |
| REGRESSION.HCC1395_tumor.L003 | -71 | Cycle | Base Insertion | 26209 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -71 | Cycle | Base Deletion | 26209 | 1.98 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -72 | Cycle | Base Substitution | 26173 | 42.27 | 29.00 | 30.40 | -1.40 | Before |
| REGRESSION.HCC1395_tumor.L003 | -72 | Cycle | Base Insertion | 26046 | 0.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -72 | Cycle | Base Deletion | 26046 | 1.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -73 | Cycle | Base Substitution | 26151 | 33.65 | 30.00 | 30.51 | -0.51 | Before |
| REGRESSION.HCC1395_tumor.L003 | -73 | Cycle | Base Insertion | 26020 | 0.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -73 | Cycle | Base Deletion | 26020 | 1.57 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -74 | Cycle | Base Substitution | 26220 | 33.45 | 30.00 | 30.24 | -0.24 | Before |
| REGRESSION.HCC1395_tumor.L003 | -74 | Cycle | Base Insertion | 26083 | 0.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -74 | Cycle | Base Deletion | 26083 | 1.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -75 | Cycle | Base Substitution | 26180 | 37.20 | 30.00 | 30.46 | -0.46 | Before |
| REGRESSION.HCC1395_tumor.L003 | -75 | Cycle | Base Insertion | 26044 | 0.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -75 | Cycle | Base Deletion | 26044 | 1.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -76 | Cycle | Base Substitution | 26141 | 42.51 | 29.00 | 30.49 | -1.49 | Before |
| REGRESSION.HCC1395_tumor.L003 | -76 | Cycle | Base Insertion | 25999 | 0.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -76 | Cycle | Base Deletion | 25999 | 1.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -77 | Cycle | Base Substitution | 26055 | 40.86 | 29.00 | 30.51 | -1.51 | Before |
| REGRESSION.HCC1395_tumor.L003 | -77 | Cycle | Base Insertion | 25910 | 0.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -77 | Cycle | Base Deletion | 25910 | 1.52 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -78 | Cycle | Base Substitution | 25961 | 44.02 | 29.00 | 30.77 | -1.77 | Before |
| REGRESSION.HCC1395_tumor.L003 | -78 | Cycle | Base Insertion | 25813 | 0.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -78 | Cycle | Base Deletion | 25813 | 1.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -79 | Cycle | Base Substitution | 25933 | 48.43 | 29.00 | 30.53 | -1.53 | Before |
| REGRESSION.HCC1395_tumor.L003 | -79 | Cycle | Base Insertion | 25780 | 0.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -79 | Cycle | Base Deletion | 25780 | 1.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -8 | Cycle | Base Substitution | 27047 | 43.31 | 29.00 | 30.94 | -1.94 | Before |
| REGRESSION.HCC1395_tumor.L003 | -8 | Cycle | Base Insertion | 27047 | 0.93 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -8 | Cycle | Base Deletion | 27047 | 0.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -80 | Cycle | Base Substitution | 25895 | 42.63 | 29.00 | 30.58 | -1.58 | Before |
| REGRESSION.HCC1395_tumor.L003 | -80 | Cycle | Base Insertion | 25742 | 0.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -80 | Cycle | Base Deletion | 25742 | 0.96 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -81 | Cycle | Base Substitution | 25935 | 41.68 | 29.00 | 30.41 | -1.41 | Before |
| REGRESSION.HCC1395_tumor.L003 | -81 | Cycle | Base Insertion | 25774 | 0.79 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -81 | Cycle | Base Deletion | 25774 | 1.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -82 | Cycle | Base Substitution | 25860 | 47.39 | 29.00 | 30.15 | -1.15 | Before |
| REGRESSION.HCC1395_tumor.L003 | -82 | Cycle | Base Insertion | 25685 | 0.90 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -82 | Cycle | Base Deletion | 25685 | 1.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -83 | Cycle | Base Substitution | 25770 | 44.81 | 29.00 | 30.22 | -1.22 | Before |
| REGRESSION.HCC1395_tumor.L003 | -83 | Cycle | Base Insertion | 25578 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -83 | Cycle | Base Deletion | 25578 | 1.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -84 | Cycle | Base Substitution | 25781 | 47.98 | 29.00 | 30.45 | -1.45 | Before |
| REGRESSION.HCC1395_tumor.L003 | -84 | Cycle | Base Insertion | 25591 | 0.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -84 | Cycle | Base Deletion | 25591 | 0.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -85 | Cycle | Base Substitution | 25756 | 50.26 | 29.00 | 30.68 | -1.68 | Before |
| REGRESSION.HCC1395_tumor.L003 | -85 | Cycle | Base Insertion | 25579 | 0.78 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -85 | Cycle | Base Deletion | 25579 | 0.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -86 | Cycle | Base Substitution | 25496 | 56.64 | 29.00 | 30.05 | -1.05 | Before |
| REGRESSION.HCC1395_tumor.L003 | -86 | Cycle | Base Insertion | 25316 | 0.86 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -86 | Cycle | Base Deletion | 25316 | 0.89 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -87 | Cycle | Base Substitution | 25716 | 44.35 | 29.00 | 30.49 | -1.49 | Before |
| REGRESSION.HCC1395_tumor.L003 | -87 | Cycle | Base Insertion | 25520 | 0.95 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -87 | Cycle | Base Deletion | 25520 | 0.87 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -88 | Cycle | Base Substitution | 25654 | 44.95 | 29.00 | 30.55 | -1.55 | Before |
| REGRESSION.HCC1395_tumor.L003 | -88 | Cycle | Base Insertion | 25455 | 0.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -88 | Cycle | Base Deletion | 25455 | 0.81 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -89 | Cycle | Base Substitution | 25565 | 52.39 | 28.00 | 29.93 | -1.93 | Before |
| REGRESSION.HCC1395_tumor.L003 | -89 | Cycle | Base Insertion | 25359 | 0.61 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -89 | Cycle | Base Deletion | 25359 | 0.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -9 | Cycle | Base Substitution | 27028 | 43.29 | 30.00 | 31.16 | -1.16 | Before |
| REGRESSION.HCC1395_tumor.L003 | -9 | Cycle | Base Insertion | 27028 | 0.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -9 | Cycle | Base Deletion | 27028 | 1.02 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -90 | Cycle | Base Substitution | 25508 | 38.58 | 29.00 | 30.52 | -1.52 | Before |
| REGRESSION.HCC1395_tumor.L003 | -90 | Cycle | Base Insertion | 25300 | 0.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -90 | Cycle | Base Deletion | 25300 | 0.85 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -91 | Cycle | Base Substitution | 25390 | 42.93 | 29.00 | 30.58 | -1.58 | Before |
| REGRESSION.HCC1395_tumor.L003 | -91 | Cycle | Base Insertion | 25182 | 0.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -91 | Cycle | Base Deletion | 25182 | 0.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -92 | Cycle | Base Substitution | 25296 | 42.65 | 29.00 | 30.55 | -1.55 | Before |
| REGRESSION.HCC1395_tumor.L003 | -92 | Cycle | Base Insertion | 25064 | 0.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -92 | Cycle | Base Deletion | 25064 | 1.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -93 | Cycle | Base Substitution | 25303 | 59.84 | 29.00 | 30.31 | -1.31 | Before |
| REGRESSION.HCC1395_tumor.L003 | -93 | Cycle | Base Insertion | 25084 | 0.78 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -93 | Cycle | Base Deletion | 25084 | 1.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -94 | Cycle | Base Substitution | 25169 | 37.43 | 29.00 | 30.67 | -1.67 | Before |
| REGRESSION.HCC1395_tumor.L003 | -94 | Cycle | Base Insertion | 24947 | 0.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -94 | Cycle | Base Deletion | 24947 | 0.97 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -95 | Cycle | Base Substitution | 25180 | 37.64 | 29.00 | 30.47 | -1.47 | Before |
| REGRESSION.HCC1395_tumor.L003 | -95 | Cycle | Base Insertion | 24956 | 0.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -95 | Cycle | Base Deletion | 24956 | 0.69 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -96 | Cycle | Base Substitution | 25127 | 57.66 | 29.00 | 30.28 | -1.28 | Before |
| REGRESSION.HCC1395_tumor.L003 | -96 | Cycle | Base Insertion | 24892 | 0.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -96 | Cycle | Base Deletion | 24892 | 0.92 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -97 | Cycle | Base Substitution | 24982 | 44.74 | 29.00 | 30.35 | -1.35 | Before |
| REGRESSION.HCC1395_tumor.L003 | -97 | Cycle | Base Insertion | 24722 | 0.57 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -97 | Cycle | Base Deletion | 24722 | 1.21 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -98 | Cycle | Base Substitution | 25112 | 46.02 | 29.00 | 30.20 | -1.20 | Before |
| REGRESSION.HCC1395_tumor.L003 | -98 | Cycle | Base Insertion | 24855 | 0.57 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -98 | Cycle | Base Deletion | 24855 | 1.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -99 | Cycle | Base Substitution | 24878 | 45.00 | 29.00 | 30.65 | -1.65 | Before |
| REGRESSION.HCC1395_tumor.L003 | -99 | Cycle | Base Insertion | 24632 | 0.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | -99 | Cycle | Base Deletion | 24632 | 1.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 1 | Cycle | Base Substitution | 26714 | 61.99 | 27.00 | 28.66 | -1.66 | Before |
| REGRESSION.HCC1395_tumor.L003 | 10 | Cycle | Base Substitution | 26954 | 38.16 | 30.00 | 31.11 | -1.11 | Before |
| REGRESSION.HCC1395_tumor.L003 | 10 | Cycle | Base Insertion | 26954 | 0.75 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 10 | Cycle | Base Deletion | 26954 | 0.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 100 | Cycle | Base Substitution | 24772 | 45.97 | 29.00 | 30.57 | -1.57 | Before |
| REGRESSION.HCC1395_tumor.L003 | 100 | Cycle | Base Insertion | 24525 | 0.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 100 | Cycle | Base Deletion | 24525 | 0.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 101 | Cycle | Base Substitution | 24864 | 45.99 | 29.00 | 30.55 | -1.55 | Before |
| REGRESSION.HCC1395_tumor.L003 | 101 | Cycle | Base Insertion | 24620 | 0.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 101 | Cycle | Base Deletion | 24620 | 1.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 102 | Cycle | Base Substitution | 24858 | 44.14 | 29.00 | 30.49 | -1.49 | Before |
| REGRESSION.HCC1395_tumor.L003 | 102 | Cycle | Base Insertion | 24600 | 1.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 102 | Cycle | Base Deletion | 24600 | 0.94 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 103 | Cycle | Base Substitution | 24654 | 36.25 | 29.00 | 30.25 | -1.25 | Before |
| REGRESSION.HCC1395_tumor.L003 | 103 | Cycle | Base Insertion | 24399 | 0.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 103 | Cycle | Base Deletion | 24399 | 0.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 104 | Cycle | Base Substitution | 24762 | 40.33 | 29.00 | 30.46 | -1.46 | Before |
| REGRESSION.HCC1395_tumor.L003 | 104 | Cycle | Base Insertion | 24510 | 0.65 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 104 | Cycle | Base Deletion | 24510 | 0.92 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 105 | Cycle | Base Substitution | 24624 | 41.23 | 29.00 | 30.81 | -1.81 | Before |
| REGRESSION.HCC1395_tumor.L003 | 105 | Cycle | Base Insertion | 24375 | 0.75 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 105 | Cycle | Base Deletion | 24375 | 0.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 106 | Cycle | Base Substitution | 24478 | 44.46 | 29.00 | 30.56 | -1.56 | Before |
| REGRESSION.HCC1395_tumor.L003 | 106 | Cycle | Base Insertion | 24220 | 0.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 106 | Cycle | Base Deletion | 24220 | 0.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 107 | Cycle | Base Substitution | 24508 | 51.58 | 29.00 | 30.19 | -1.19 | Before |
| REGRESSION.HCC1395_tumor.L003 | 107 | Cycle | Base Insertion | 24253 | 0.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 107 | Cycle | Base Deletion | 24253 | 0.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 108 | Cycle | Base Substitution | 24355 | 41.32 | 29.00 | 30.35 | -1.35 | Before |
| REGRESSION.HCC1395_tumor.L003 | 108 | Cycle | Base Insertion | 24074 | 0.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 108 | Cycle | Base Deletion | 24074 | 0.73 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 109 | Cycle | Base Substitution | 24449 | 40.94 | 29.00 | 30.31 | -1.31 | Before |
| REGRESSION.HCC1395_tumor.L003 | 109 | Cycle | Base Insertion | 24172 | 0.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 109 | Cycle | Base Deletion | 24172 | 0.90 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 11 | Cycle | Base Substitution | 26925 | 35.49 | 30.00 | 31.20 | -1.20 | Before |
| REGRESSION.HCC1395_tumor.L003 | 11 | Cycle | Base Insertion | 26925 | 0.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 11 | Cycle | Base Deletion | 26925 | 0.69 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 110 | Cycle | Base Substitution | 24259 | 55.26 | 29.00 | 30.07 | -1.07 | Before |
| REGRESSION.HCC1395_tumor.L003 | 110 | Cycle | Base Insertion | 23975 | 0.65 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 110 | Cycle | Base Deletion | 23975 | 0.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 111 | Cycle | Base Substitution | 24198 | 47.00 | 29.00 | 30.20 | -1.20 | Before |
| REGRESSION.HCC1395_tumor.L003 | 111 | Cycle | Base Insertion | 23907 | 0.76 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 111 | Cycle | Base Deletion | 23907 | 0.81 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 112 | Cycle | Base Substitution | 24084 | 52.13 | 29.00 | 30.49 | -1.49 | Before |
| REGRESSION.HCC1395_tumor.L003 | 112 | Cycle | Base Insertion | 23811 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 112 | Cycle | Base Deletion | 23811 | 0.99 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 113 | Cycle | Base Substitution | 24182 | 43.96 | 29.00 | 30.45 | -1.45 | Before |
| REGRESSION.HCC1395_tumor.L003 | 113 | Cycle | Base Insertion | 23919 | 0.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 113 | Cycle | Base Deletion | 23919 | 1.03 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 114 | Cycle | Base Substitution | 24010 | 47.19 | 29.00 | 30.29 | -1.29 | Before |
| REGRESSION.HCC1395_tumor.L003 | 114 | Cycle | Base Insertion | 23753 | 0.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 114 | Cycle | Base Deletion | 23753 | 1.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 115 | Cycle | Base Substitution | 24003 | 51.97 | 29.00 | 30.12 | -1.12 | Before |
| REGRESSION.HCC1395_tumor.L003 | 115 | Cycle | Base Insertion | 23730 | 0.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 115 | Cycle | Base Deletion | 23730 | 1.12 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 116 | Cycle | Base Substitution | 23928 | 47.83 | 29.00 | 30.22 | -1.22 | Before |
| REGRESSION.HCC1395_tumor.L003 | 116 | Cycle | Base Insertion | 23658 | 1.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 116 | Cycle | Base Deletion | 23658 | 1.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 117 | Cycle | Base Substitution | 23942 | 49.26 | 29.00 | 30.16 | -1.16 | Before |
| REGRESSION.HCC1395_tumor.L003 | 117 | Cycle | Base Insertion | 23656 | 0.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 117 | Cycle | Base Deletion | 23656 | 0.90 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 118 | Cycle | Base Substitution | 23761 | 35.36 | 29.00 | 30.27 | -1.27 | Before |
| REGRESSION.HCC1395_tumor.L003 | 118 | Cycle | Base Insertion | 23477 | 0.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 118 | Cycle | Base Deletion | 23477 | 0.90 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 119 | Cycle | Base Substitution | 23727 | 37.94 | 29.00 | 30.24 | -1.24 | Before |
| REGRESSION.HCC1395_tumor.L003 | 119 | Cycle | Base Insertion | 23430 | 0.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 119 | Cycle | Base Deletion | 23430 | 1.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 12 | Cycle | Base Substitution | 26897 | 29.84 | 31.00 | 31.68 | -0.68 | Before |
| REGRESSION.HCC1395_tumor.L003 | 12 | Cycle | Base Insertion | 26897 | 0.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 12 | Cycle | Base Deletion | 26897 | 0.90 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 120 | Cycle | Base Substitution | 23671 | 42.96 | 29.00 | 30.30 | -1.30 | Before |
| REGRESSION.HCC1395_tumor.L003 | 120 | Cycle | Base Insertion | 23384 | 0.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 120 | Cycle | Base Deletion | 23384 | 1.02 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 121 | Cycle | Base Substitution | 23583 | 49.00 | 29.00 | 30.16 | -1.16 | Before |
| REGRESSION.HCC1395_tumor.L003 | 121 | Cycle | Base Insertion | 23288 | 0.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 121 | Cycle | Base Deletion | 23288 | 1.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 122 | Cycle | Base Substitution | 23625 | 38.71 | 29.00 | 30.22 | -1.22 | Before |
| REGRESSION.HCC1395_tumor.L003 | 122 | Cycle | Base Insertion | 23334 | 0.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 122 | Cycle | Base Deletion | 23334 | 1.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 123 | Cycle | Base Substitution | 23489 | 35.94 | 29.00 | 30.09 | -1.09 | Before |
| REGRESSION.HCC1395_tumor.L003 | 123 | Cycle | Base Insertion | 23196 | 0.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 123 | Cycle | Base Deletion | 23196 | 0.73 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 124 | Cycle | Base Substitution | 23432 | 49.43 | 29.00 | 30.03 | -1.03 | Before |
| REGRESSION.HCC1395_tumor.L003 | 124 | Cycle | Base Insertion | 23116 | 0.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 124 | Cycle | Base Deletion | 23116 | 0.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 125 | Cycle | Base Substitution | 23282 | 39.22 | 29.00 | 30.06 | -1.06 | Before |
| REGRESSION.HCC1395_tumor.L003 | 125 | Cycle | Base Insertion | 22979 | 0.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 125 | Cycle | Base Deletion | 22979 | 0.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 126 | Cycle | Base Substitution | 23363 | 50.22 | 28.00 | 29.93 | -1.93 | Before |
| REGRESSION.HCC1395_tumor.L003 | 126 | Cycle | Base Insertion | 23042 | 0.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 126 | Cycle | Base Deletion | 23042 | 0.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 127 | Cycle | Base Substitution | 23288 | 39.69 | 29.00 | 29.95 | -0.95 | Before |
| REGRESSION.HCC1395_tumor.L003 | 127 | Cycle | Base Insertion | 22969 | 0.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 127 | Cycle | Base Deletion | 22969 | 0.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 128 | Cycle | Base Substitution | 23160 | 51.69 | 29.00 | 30.07 | -1.07 | Before |
| REGRESSION.HCC1395_tumor.L003 | 128 | Cycle | Base Insertion | 22858 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 128 | Cycle | Base Deletion | 22858 | 0.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 129 | Cycle | Base Substitution | 23055 | 53.41 | 29.00 | 30.18 | -1.18 | Before |
| REGRESSION.HCC1395_tumor.L003 | 129 | Cycle | Base Insertion | 22760 | 0.61 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 129 | Cycle | Base Deletion | 22760 | 0.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 13 | Cycle | Base Substitution | 26905 | 22.48 | 31.00 | 31.35 | -0.35 | Before |
| REGRESSION.HCC1395_tumor.L003 | 13 | Cycle | Base Insertion | 26905 | 0.21 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 13 | Cycle | Base Deletion | 26905 | 1.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 130 | Cycle | Base Substitution | 22998 | 38.78 | 29.00 | 30.14 | -1.14 | Before |
| REGRESSION.HCC1395_tumor.L003 | 130 | Cycle | Base Insertion | 22688 | 0.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 130 | Cycle | Base Deletion | 22688 | 1.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 131 | Cycle | Base Substitution | 22839 | 46.59 | 28.00 | 29.89 | -1.89 | Before |
| REGRESSION.HCC1395_tumor.L003 | 131 | Cycle | Base Insertion | 22529 | 0.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 131 | Cycle | Base Deletion | 22529 | 0.83 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 132 | Cycle | Base Substitution | 22988 | 36.68 | 29.00 | 30.01 | -1.01 | Before |
| REGRESSION.HCC1395_tumor.L003 | 132 | Cycle | Base Insertion | 22676 | 0.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 132 | Cycle | Base Deletion | 22676 | 0.86 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 133 | Cycle | Base Substitution | 22754 | 50.20 | 29.00 | 30.02 | -1.02 | Before |
| REGRESSION.HCC1395_tumor.L003 | 133 | Cycle | Base Insertion | 22421 | 0.03 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 133 | Cycle | Base Deletion | 22421 | 1.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 134 | Cycle | Base Substitution | 22730 | 52.50 | 28.00 | 29.86 | -1.86 | Before |
| REGRESSION.HCC1395_tumor.L003 | 134 | Cycle | Base Insertion | 22390 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 134 | Cycle | Base Deletion | 22390 | 0.88 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 135 | Cycle | Base Substitution | 22570 | 44.39 | 29.00 | 30.08 | -1.08 | Before |
| REGRESSION.HCC1395_tumor.L003 | 135 | Cycle | Base Insertion | 22224 | 1.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 135 | Cycle | Base Deletion | 22224 | 0.82 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 136 | Cycle | Base Substitution | 22590 | 41.33 | 29.00 | 30.10 | -1.10 | Before |
| REGRESSION.HCC1395_tumor.L003 | 136 | Cycle | Base Insertion | 22242 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 136 | Cycle | Base Deletion | 22242 | 0.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 137 | Cycle | Base Substitution | 22466 | 36.40 | 29.00 | 29.76 | -0.76 | Before |
| REGRESSION.HCC1395_tumor.L003 | 137 | Cycle | Base Insertion | 22103 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 137 | Cycle | Base Deletion | 22103 | 0.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 138 | Cycle | Base Substitution | 22477 | 40.95 | 29.00 | 30.00 | -1.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 138 | Cycle | Base Insertion | 22130 | 0.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 138 | Cycle | Base Deletion | 22130 | 0.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 139 | Cycle | Base Substitution | 22320 | 48.31 | 28.00 | 29.91 | -1.91 | Before |
| REGRESSION.HCC1395_tumor.L003 | 139 | Cycle | Base Insertion | 21983 | 0.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 139 | Cycle | Base Deletion | 21983 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 14 | Cycle | Base Substitution | 26876 | 26.42 | 31.00 | 31.61 | -0.61 | Before |
| REGRESSION.HCC1395_tumor.L003 | 14 | Cycle | Base Insertion | 26876 | 0.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 14 | Cycle | Base Deletion | 26876 | 1.21 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 140 | Cycle | Base Substitution | 22257 | 51.91 | 29.00 | 30.31 | -1.31 | Before |
| REGRESSION.HCC1395_tumor.L003 | 140 | Cycle | Base Insertion | 21931 | 0.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 140 | Cycle | Base Deletion | 21931 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 141 | Cycle | Base Substitution | 22193 | 41.52 | 29.00 | 30.24 | -1.24 | Before |
| REGRESSION.HCC1395_tumor.L003 | 141 | Cycle | Base Insertion | 21865 | 1.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 141 | Cycle | Base Deletion | 21865 | 0.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 142 | Cycle | Base Substitution | 22109 | 43.56 | 29.00 | 30.42 | -1.42 | Before |
| REGRESSION.HCC1395_tumor.L003 | 142 | Cycle | Base Insertion | 21744 | 0.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 142 | Cycle | Base Deletion | 21744 | 0.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 143 | Cycle | Base Substitution | 22061 | 50.00 | 28.00 | 29.76 | -1.76 | Before |
| REGRESSION.HCC1395_tumor.L003 | 143 | Cycle | Base Insertion | 21703 | 0.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 143 | Cycle | Base Deletion | 21703 | 0.87 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 144 | Cycle | Base Substitution | 22025 | 37.87 | 29.00 | 29.89 | -0.89 | Before |
| REGRESSION.HCC1395_tumor.L003 | 144 | Cycle | Base Insertion | 21653 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 144 | Cycle | Base Deletion | 21653 | 0.75 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 145 | Cycle | Base Substitution | 21823 | 41.87 | 28.00 | 29.78 | -1.78 | Before |
| REGRESSION.HCC1395_tumor.L003 | 145 | Cycle | Base Insertion | 21464 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 145 | Cycle | Base Deletion | 21464 | 0.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 146 | Cycle | Base Substitution | 21740 | 51.89 | 28.00 | 29.51 | -1.51 | Before |
| REGRESSION.HCC1395_tumor.L003 | 146 | Cycle | Base Insertion | 21399 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 146 | Cycle | Base Deletion | 21399 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 147 | Cycle | Base Substitution | 21696 | 54.38 | 28.00 | 29.92 | -1.92 | Before |
| REGRESSION.HCC1395_tumor.L003 | 148 | Cycle | Base Substitution | 21613 | 46.64 | 29.00 | 30.05 | -1.05 | Before |
| REGRESSION.HCC1395_tumor.L003 | 149 | Cycle | Base Substitution | 21459 | 51.16 | 28.00 | 29.72 | -1.72 | Before |
| REGRESSION.HCC1395_tumor.L003 | 15 | Cycle | Base Substitution | 27053 | 30.30 | 31.00 | 31.61 | -0.61 | Before |
| REGRESSION.HCC1395_tumor.L003 | 15 | Cycle | Base Insertion | 27053 | 0.21 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 15 | Cycle | Base Deletion | 27053 | 1.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 150 | Cycle | Base Substitution | 21544 | 40.73 | 28.00 | 29.92 | -1.92 | Before |
| REGRESSION.HCC1395_tumor.L003 | 16 | Cycle | Base Substitution | 26997 | 26.12 | 32.00 | 32.80 | -0.80 | Before |
| REGRESSION.HCC1395_tumor.L003 | 16 | Cycle | Base Insertion | 26997 | 0.21 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 16 | Cycle | Base Deletion | 26997 | 1.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 17 | Cycle | Base Substitution | 26964 | 28.01 | 32.00 | 33.10 | -1.10 | Before |
| REGRESSION.HCC1395_tumor.L003 | 17 | Cycle | Base Insertion | 26964 | 0.07 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 17 | Cycle | Base Deletion | 26964 | 1.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 18 | Cycle | Base Substitution | 26983 | 20.06 | 33.00 | 33.05 | -0.05 | Before |
| REGRESSION.HCC1395_tumor.L003 | 18 | Cycle | Base Insertion | 26983 | 0.69 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 18 | Cycle | Base Deletion | 26983 | 1.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 19 | Cycle | Base Substitution | 26873 | 22.53 | 32.00 | 32.62 | -0.62 | Before |
| REGRESSION.HCC1395_tumor.L003 | 19 | Cycle | Base Insertion | 26873 | 0.60 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 19 | Cycle | Base Deletion | 26873 | 1.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 2 | Cycle | Base Substitution | 27125 | 49.75 | 29.00 | 30.08 | -1.08 | Before |
| REGRESSION.HCC1395_tumor.L003 | 20 | Cycle | Base Substitution | 26845 | 16.41 | 32.00 | 33.00 | -1.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 20 | Cycle | Base Insertion | 26845 | 0.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 20 | Cycle | Base Deletion | 26845 | 1.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 21 | Cycle | Base Substitution | 26822 | 27.85 | 32.00 | 33.34 | -1.34 | Before |
| REGRESSION.HCC1395_tumor.L003 | 21 | Cycle | Base Insertion | 26822 | 1.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 21 | Cycle | Base Deletion | 26822 | 1.65 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 22 | Cycle | Base Substitution | 26815 | 22.49 | 32.00 | 32.58 | -0.58 | Before |
| REGRESSION.HCC1395_tumor.L003 | 22 | Cycle | Base Insertion | 26815 | 0.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 22 | Cycle | Base Deletion | 26815 | 1.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 23 | Cycle | Base Substitution | 26888 | 17.45 | 33.00 | 33.16 | -0.16 | Before |
| REGRESSION.HCC1395_tumor.L003 | 23 | Cycle | Base Insertion | 26888 | 0.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 23 | Cycle | Base Deletion | 26888 | 2.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 24 | Cycle | Base Substitution | 26766 | 22.78 | 32.00 | 32.63 | -0.63 | Before |
| REGRESSION.HCC1395_tumor.L003 | 24 | Cycle | Base Insertion | 26766 | 0.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 24 | Cycle | Base Deletion | 26766 | 1.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 25 | Cycle | Base Substitution | 26762 | 23.07 | 32.00 | 32.51 | -0.51 | Before |
| REGRESSION.HCC1395_tumor.L003 | 25 | Cycle | Base Insertion | 26762 | 0.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 25 | Cycle | Base Deletion | 26762 | 1.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 26 | Cycle | Base Substitution | 26752 | 32.24 | 30.00 | 31.41 | -1.41 | Before |
| REGRESSION.HCC1395_tumor.L003 | 26 | Cycle | Base Insertion | 26752 | 0.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 26 | Cycle | Base Deletion | 26752 | 1.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 27 | Cycle | Base Substitution | 26594 | 30.24 | 31.00 | 31.26 | -0.26 | Before |
| REGRESSION.HCC1395_tumor.L003 | 27 | Cycle | Base Insertion | 26594 | 0.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 27 | Cycle | Base Deletion | 26594 | 1.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 28 | Cycle | Base Substitution | 26658 | 33.90 | 30.00 | 31.30 | -1.30 | Before |
| REGRESSION.HCC1395_tumor.L003 | 28 | Cycle | Base Insertion | 26658 | 0.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 28 | Cycle | Base Deletion | 26658 | 1.61 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 29 | Cycle | Base Substitution | 26865 | 22.31 | 31.00 | 31.76 | -0.76 | Before |
| REGRESSION.HCC1395_tumor.L003 | 29 | Cycle | Base Insertion | 26864 | 0.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 29 | Cycle | Base Deletion | 26864 | 1.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 3 | Cycle | Base Substitution | 27071 | 50.36 | 29.00 | 30.68 | -1.68 | Before |
| REGRESSION.HCC1395_tumor.L003 | 30 | Cycle | Base Substitution | 26816 | 37.68 | 30.00 | 31.69 | -1.69 | Before |
| REGRESSION.HCC1395_tumor.L003 | 30 | Cycle | Base Insertion | 26813 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 30 | Cycle | Base Deletion | 26813 | 1.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 31 | Cycle | Base Substitution | 26826 | 32.95 | 30.00 | 31.49 | -1.49 | Before |
| REGRESSION.HCC1395_tumor.L003 | 31 | Cycle | Base Insertion | 26822 | 0.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 31 | Cycle | Base Deletion | 26822 | 1.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 32 | Cycle | Base Substitution | 26839 | 38.60 | 30.00 | 31.50 | -1.50 | Before |
| REGRESSION.HCC1395_tumor.L003 | 32 | Cycle | Base Insertion | 26835 | 0.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 32 | Cycle | Base Deletion | 26835 | 1.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 33 | Cycle | Base Substitution | 26753 | 27.29 | 31.00 | 31.72 | -0.72 | Before |
| REGRESSION.HCC1395_tumor.L003 | 33 | Cycle | Base Insertion | 26751 | 0.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 33 | Cycle | Base Deletion | 26751 | 1.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 34 | Cycle | Base Substitution | 26673 | 33.23 | 30.00 | 31.35 | -1.35 | Before |
| REGRESSION.HCC1395_tumor.L003 | 34 | Cycle | Base Insertion | 26672 | 0.62 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 34 | Cycle | Base Deletion | 26672 | 2.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 35 | Cycle | Base Substitution | 26792 | 35.30 | 30.00 | 31.55 | -1.55 | Before |
| REGRESSION.HCC1395_tumor.L003 | 35 | Cycle | Base Insertion | 26792 | 1.01 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 35 | Cycle | Base Deletion | 26792 | 1.74 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 36 | Cycle | Base Substitution | 26677 | 38.71 | 30.00 | 31.94 | -1.94 | Before |
| REGRESSION.HCC1395_tumor.L003 | 36 | Cycle | Base Insertion | 26676 | 1.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 36 | Cycle | Base Deletion | 26676 | 2.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 37 | Cycle | Base Substitution | 26655 | 29.63 | 31.00 | 31.54 | -0.54 | Before |
| REGRESSION.HCC1395_tumor.L003 | 37 | Cycle | Base Insertion | 26653 | 1.07 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 37 | Cycle | Base Deletion | 26653 | 1.94 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 38 | Cycle | Base Substitution | 26665 | 36.39 | 30.00 | 31.40 | -1.40 | Before |
| REGRESSION.HCC1395_tumor.L003 | 38 | Cycle | Base Insertion | 26664 | 0.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 38 | Cycle | Base Deletion | 26664 | 1.79 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 39 | Cycle | Base Substitution | 26703 | 32.85 | 30.00 | 30.93 | -0.93 | Before |
| REGRESSION.HCC1395_tumor.L003 | 39 | Cycle | Base Insertion | 26702 | 0.73 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 39 | Cycle | Base Deletion | 26702 | 1.79 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 4 | Cycle | Base Substitution | 27014 | 66.20 | 28.00 | 30.70 | -2.70 | Before |
| REGRESSION.HCC1395_tumor.L003 | 40 | Cycle | Base Substitution | 26617 | 25.96 | 31.00 | 31.54 | -0.54 | Before |
| REGRESSION.HCC1395_tumor.L003 | 40 | Cycle | Base Insertion | 26616 | 0.62 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 40 | Cycle | Base Deletion | 26616 | 1.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 41 | Cycle | Base Substitution | 26633 | 33.48 | 30.00 | 31.46 | -1.46 | Before |
| REGRESSION.HCC1395_tumor.L003 | 41 | Cycle | Base Insertion | 26633 | 0.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 41 | Cycle | Base Deletion | 26633 | 1.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 42 | Cycle | Base Substitution | 26608 | 23.21 | 31.00 | 31.60 | -0.60 | Before |
| REGRESSION.HCC1395_tumor.L003 | 42 | Cycle | Base Insertion | 26607 | 0.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 42 | Cycle | Base Deletion | 26607 | 1.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 43 | Cycle | Base Substitution | 26703 | 33.97 | 30.00 | 31.36 | -1.36 | Before |
| REGRESSION.HCC1395_tumor.L003 | 43 | Cycle | Base Insertion | 26701 | 0.57 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 43 | Cycle | Base Deletion | 26701 | 1.74 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 44 | Cycle | Base Substitution | 26711 | 35.03 | 30.00 | 31.81 | -1.81 | Before |
| REGRESSION.HCC1395_tumor.L003 | 44 | Cycle | Base Insertion | 26709 | 0.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 44 | Cycle | Base Deletion | 26709 | 1.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 45 | Cycle | Base Substitution | 26651 | 27.08 | 31.00 | 31.35 | -0.35 | Before |
| REGRESSION.HCC1395_tumor.L003 | 45 | Cycle | Base Insertion | 26648 | 0.78 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 45 | Cycle | Base Deletion | 26648 | 1.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 46 | Cycle | Base Substitution | 26634 | 23.88 | 31.00 | 31.90 | -0.90 | Before |
| REGRESSION.HCC1395_tumor.L003 | 46 | Cycle | Base Insertion | 26630 | 0.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 46 | Cycle | Base Deletion | 26630 | 1.84 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 47 | Cycle | Base Substitution | 26672 | 30.96 | 31.00 | 31.17 | -0.17 | Before |
| REGRESSION.HCC1395_tumor.L003 | 47 | Cycle | Base Insertion | 26669 | 0.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 47 | Cycle | Base Deletion | 26669 | 1.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 48 | Cycle | Base Substitution | 26581 | 30.76 | 31.00 | 31.24 | -0.24 | Before |
| REGRESSION.HCC1395_tumor.L003 | 48 | Cycle | Base Insertion | 26577 | 0.65 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 48 | Cycle | Base Deletion | 26577 | 1.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 49 | Cycle | Base Substitution | 26664 | 23.63 | 31.00 | 31.16 | -0.16 | Before |
| REGRESSION.HCC1395_tumor.L003 | 49 | Cycle | Base Insertion | 26657 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 49 | Cycle | Base Deletion | 26657 | 1.73 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 5 | Cycle | Base Substitution | 27089 | 48.35 | 30.00 | 31.11 | -1.11 | Before |
| REGRESSION.HCC1395_tumor.L003 | 5 | Cycle | Base Insertion | 27089 | 0.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 5 | Cycle | Base Deletion | 27089 | 0.94 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 50 | Cycle | Base Substitution | 26588 | 27.01 | 31.00 | 31.39 | -0.39 | Before |
| REGRESSION.HCC1395_tumor.L003 | 50 | Cycle | Base Insertion | 26581 | 0.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 50 | Cycle | Base Deletion | 26581 | 1.93 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 51 | Cycle | Base Substitution | 26541 | 39.02 | 30.00 | 31.40 | -1.40 | Before |
| REGRESSION.HCC1395_tumor.L003 | 51 | Cycle | Base Insertion | 26532 | 0.91 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 51 | Cycle | Base Deletion | 26532 | 1.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 52 | Cycle | Base Substitution | 26665 | 36.86 | 30.00 | 31.30 | -1.30 | Before |
| REGRESSION.HCC1395_tumor.L003 | 52 | Cycle | Base Insertion | 26653 | 0.74 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 52 | Cycle | Base Deletion | 26653 | 1.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 53 | Cycle | Base Substitution | 26553 | 30.99 | 31.00 | 31.67 | -0.67 | Before |
| REGRESSION.HCC1395_tumor.L003 | 53 | Cycle | Base Insertion | 26534 | 0.57 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 53 | Cycle | Base Deletion | 26534 | 1.57 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 54 | Cycle | Base Substitution | 26493 | 30.64 | 31.00 | 31.77 | -0.77 | Before |
| REGRESSION.HCC1395_tumor.L003 | 54 | Cycle | Base Insertion | 26466 | 0.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 54 | Cycle | Base Deletion | 26466 | 1.04 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 55 | Cycle | Base Substitution | 26555 | 27.90 | 31.00 | 31.60 | -0.60 | Before |
| REGRESSION.HCC1395_tumor.L003 | 55 | Cycle | Base Insertion | 26524 | 0.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 55 | Cycle | Base Deletion | 26524 | 1.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 56 | Cycle | Base Substitution | 26513 | 36.95 | 30.00 | 31.27 | -1.27 | Before |
| REGRESSION.HCC1395_tumor.L003 | 56 | Cycle | Base Insertion | 26481 | 0.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 56 | Cycle | Base Deletion | 26481 | 1.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 57 | Cycle | Base Substitution | 26518 | 36.96 | 30.00 | 31.25 | -1.25 | Before |
| REGRESSION.HCC1395_tumor.L003 | 57 | Cycle | Base Insertion | 26470 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 57 | Cycle | Base Deletion | 26470 | 1.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 58 | Cycle | Base Substitution | 26465 | 31.97 | 30.00 | 31.43 | -1.43 | Before |
| REGRESSION.HCC1395_tumor.L003 | 58 | Cycle | Base Insertion | 26411 | 0.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 58 | Cycle | Base Deletion | 26411 | 1.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 59 | Cycle | Base Substitution | 26457 | 34.19 | 30.00 | 31.21 | -1.21 | Before |
| REGRESSION.HCC1395_tumor.L003 | 59 | Cycle | Base Insertion | 26403 | 0.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 59 | Cycle | Base Deletion | 26403 | 0.82 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 6 | Cycle | Base Substitution | 26935 | 34.70 | 30.00 | 31.14 | -1.14 | Before |
| REGRESSION.HCC1395_tumor.L003 | 6 | Cycle | Base Insertion | 26935 | 0.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 6 | Cycle | Base Deletion | 26935 | 1.03 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 60 | Cycle | Base Substitution | 26488 | 34.84 | 30.00 | 31.06 | -1.06 | Before |
| REGRESSION.HCC1395_tumor.L003 | 60 | Cycle | Base Insertion | 26435 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 60 | Cycle | Base Deletion | 26435 | 0.94 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 61 | Cycle | Base Substitution | 26342 | 31.60 | 30.00 | 31.46 | -1.46 | Before |
| REGRESSION.HCC1395_tumor.L003 | 61 | Cycle | Base Insertion | 26287 | 0.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 61 | Cycle | Base Deletion | 26287 | 0.78 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 62 | Cycle | Base Substitution | 26388 | 44.19 | 29.00 | 31.00 | -2.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 62 | Cycle | Base Insertion | 26331 | 0.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 62 | Cycle | Base Deletion | 26331 | 0.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 63 | Cycle | Base Substitution | 26420 | 32.87 | 30.00 | 31.49 | -1.49 | Before |
| REGRESSION.HCC1395_tumor.L003 | 63 | Cycle | Base Insertion | 26361 | 0.73 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 63 | Cycle | Base Deletion | 26361 | 0.93 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 64 | Cycle | Base Substitution | 26382 | 30.41 | 31.00 | 31.58 | -0.58 | Before |
| REGRESSION.HCC1395_tumor.L003 | 64 | Cycle | Base Insertion | 26303 | 0.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 64 | Cycle | Base Deletion | 26303 | 1.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 65 | Cycle | Base Substitution | 26411 | 40.12 | 30.00 | 31.48 | -1.48 | Before |
| REGRESSION.HCC1395_tumor.L003 | 65 | Cycle | Base Insertion | 26331 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 65 | Cycle | Base Deletion | 26331 | 1.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 66 | Cycle | Base Substitution | 26391 | 25.42 | 31.00 | 31.55 | -0.55 | Before |
| REGRESSION.HCC1395_tumor.L003 | 66 | Cycle | Base Insertion | 26305 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 66 | Cycle | Base Deletion | 26305 | 0.90 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 67 | Cycle | Base Substitution | 26414 | 28.32 | 31.00 | 31.44 | -0.44 | Before |
| REGRESSION.HCC1395_tumor.L003 | 67 | Cycle | Base Insertion | 26328 | 0.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 67 | Cycle | Base Deletion | 26328 | 1.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 68 | Cycle | Base Substitution | 26210 | 39.64 | 30.00 | 31.13 | -1.13 | Before |
| REGRESSION.HCC1395_tumor.L003 | 68 | Cycle | Base Insertion | 26120 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 68 | Cycle | Base Deletion | 26120 | 1.92 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 69 | Cycle | Base Substitution | 26196 | 34.04 | 30.00 | 31.25 | -1.25 | Before |
| REGRESSION.HCC1395_tumor.L003 | 69 | Cycle | Base Insertion | 26102 | 1.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 69 | Cycle | Base Deletion | 26102 | 1.86 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 7 | Cycle | Base Substitution | 26915 | 41.45 | 30.00 | 31.07 | -1.07 | Before |
| REGRESSION.HCC1395_tumor.L003 | 7 | Cycle | Base Insertion | 26915 | 0.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 7 | Cycle | Base Deletion | 26915 | 0.74 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 70 | Cycle | Base Substitution | 26316 | 50.26 | 29.00 | 30.77 | -1.77 | Before |
| REGRESSION.HCC1395_tumor.L003 | 70 | Cycle | Base Insertion | 26218 | 0.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 70 | Cycle | Base Deletion | 26218 | 1.87 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 71 | Cycle | Base Substitution | 26260 | 31.21 | 30.00 | 30.85 | -0.85 | Before |
| REGRESSION.HCC1395_tumor.L003 | 71 | Cycle | Base Insertion | 26145 | 0.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 71 | Cycle | Base Deletion | 26145 | 1.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 72 | Cycle | Base Substitution | 26223 | 38.04 | 29.00 | 30.95 | -1.95 | Before |
| REGRESSION.HCC1395_tumor.L003 | 72 | Cycle | Base Insertion | 26102 | 0.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 72 | Cycle | Base Deletion | 26102 | 1.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 73 | Cycle | Base Substitution | 26114 | 42.41 | 30.00 | 31.21 | -1.21 | Before |
| REGRESSION.HCC1395_tumor.L003 | 73 | Cycle | Base Insertion | 25987 | 0.61 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 73 | Cycle | Base Deletion | 25987 | 1.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 74 | Cycle | Base Substitution | 26128 | 39.30 | 30.00 | 31.35 | -1.35 | Before |
| REGRESSION.HCC1395_tumor.L003 | 74 | Cycle | Base Insertion | 25993 | 1.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 74 | Cycle | Base Deletion | 25993 | 2.83 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 75 | Cycle | Base Substitution | 26112 | 46.17 | 30.00 | 31.24 | -1.24 | Before |
| REGRESSION.HCC1395_tumor.L003 | 75 | Cycle | Base Insertion | 25976 | 0.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 75 | Cycle | Base Deletion | 25976 | 1.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 76 | Cycle | Base Substitution | 26052 | 46.55 | 30.00 | 31.07 | -1.07 | Before |
| REGRESSION.HCC1395_tumor.L003 | 76 | Cycle | Base Insertion | 25914 | 0.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 76 | Cycle | Base Deletion | 25914 | 1.80 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 77 | Cycle | Base Substitution | 25930 | 52.23 | 30.00 | 31.02 | -1.02 | Before |
| REGRESSION.HCC1395_tumor.L003 | 77 | Cycle | Base Insertion | 25783 | 0.84 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 77 | Cycle | Base Deletion | 25783 | 1.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 78 | Cycle | Base Substitution | 25952 | 42.36 | 30.00 | 31.05 | -1.05 | Before |
| REGRESSION.HCC1395_tumor.L003 | 78 | Cycle | Base Insertion | 25805 | 1.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 78 | Cycle | Base Deletion | 25805 | 1.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 79 | Cycle | Base Substitution | 25850 | 40.47 | 29.00 | 30.88 | -1.88 | Before |
| REGRESSION.HCC1395_tumor.L003 | 79 | Cycle | Base Insertion | 25696 | 0.52 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 79 | Cycle | Base Deletion | 25696 | 1.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 8 | Cycle | Base Substitution | 27036 | 36.17 | 30.00 | 30.93 | -0.93 | Before |
| REGRESSION.HCC1395_tumor.L003 | 8 | Cycle | Base Insertion | 27036 | 0.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 8 | Cycle | Base Deletion | 27036 | 0.77 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 80 | Cycle | Base Substitution | 25888 | 38.19 | 29.00 | 30.96 | -1.96 | Before |
| REGRESSION.HCC1395_tumor.L003 | 80 | Cycle | Base Insertion | 25728 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 80 | Cycle | Base Deletion | 25728 | 1.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 81 | Cycle | Base Substitution | 25835 | 37.56 | 29.00 | 30.85 | -1.85 | Before |
| REGRESSION.HCC1395_tumor.L003 | 81 | Cycle | Base Insertion | 25671 | 0.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 81 | Cycle | Base Deletion | 25671 | 1.62 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 82 | Cycle | Base Substitution | 25742 | 41.41 | 29.00 | 30.73 | -1.73 | Before |
| REGRESSION.HCC1395_tumor.L003 | 82 | Cycle | Base Insertion | 25578 | 0.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 82 | Cycle | Base Deletion | 25578 | 1.77 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 83 | Cycle | Base Substitution | 25766 | 34.87 | 30.00 | 31.03 | -1.03 | Before |
| REGRESSION.HCC1395_tumor.L003 | 83 | Cycle | Base Insertion | 25581 | 0.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 83 | Cycle | Base Deletion | 25581 | 1.57 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 84 | Cycle | Base Substitution | 25736 | 39.30 | 29.00 | 30.77 | -1.77 | Before |
| REGRESSION.HCC1395_tumor.L003 | 84 | Cycle | Base Insertion | 25555 | 0.76 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 84 | Cycle | Base Deletion | 25555 | 2.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 85 | Cycle | Base Substitution | 25685 | 42.43 | 29.00 | 30.77 | -1.77 | Before |
| REGRESSION.HCC1395_tumor.L003 | 85 | Cycle | Base Insertion | 25499 | 0.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 85 | Cycle | Base Deletion | 25499 | 2.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 86 | Cycle | Base Substitution | 25641 | 35.00 | 30.00 | 30.82 | -0.82 | Before |
| REGRESSION.HCC1395_tumor.L003 | 86 | Cycle | Base Insertion | 25454 | 0.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 86 | Cycle | Base Deletion | 25454 | 2.65 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 87 | Cycle | Base Substitution | 25497 | 38.35 | 29.00 | 30.65 | -1.65 | Before |
| REGRESSION.HCC1395_tumor.L003 | 87 | Cycle | Base Insertion | 25304 | 0.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 87 | Cycle | Base Deletion | 25304 | 1.96 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 88 | Cycle | Base Substitution | 25557 | 40.30 | 30.00 | 31.01 | -1.01 | Before |
| REGRESSION.HCC1395_tumor.L003 | 88 | Cycle | Base Insertion | 25359 | 0.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 88 | Cycle | Base Deletion | 25359 | 1.57 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 89 | Cycle | Base Substitution | 25521 | 37.92 | 29.00 | 30.63 | -1.63 | Before |
| REGRESSION.HCC1395_tumor.L003 | 89 | Cycle | Base Insertion | 25326 | 0.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 89 | Cycle | Base Deletion | 25326 | 1.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 9 | Cycle | Base Substitution | 27087 | 34.35 | 30.00 | 31.27 | -1.27 | Before |
| REGRESSION.HCC1395_tumor.L003 | 9 | Cycle | Base Insertion | 27087 | 0.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 9 | Cycle | Base Deletion | 27087 | 0.69 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 90 | Cycle | Base Substitution | 25447 | 41.58 | 29.00 | 30.78 | -1.78 | Before |
| REGRESSION.HCC1395_tumor.L003 | 90 | Cycle | Base Insertion | 25249 | 0.83 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 90 | Cycle | Base Deletion | 25249 | 0.94 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 91 | Cycle | Base Substitution | 25297 | 40.95 | 29.00 | 30.73 | -1.73 | Before |
| REGRESSION.HCC1395_tumor.L003 | 91 | Cycle | Base Insertion | 25089 | 1.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 91 | Cycle | Base Deletion | 25089 | 0.92 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 92 | Cycle | Base Substitution | 25276 | 41.87 | 29.00 | 30.56 | -1.56 | Before |
| REGRESSION.HCC1395_tumor.L003 | 92 | Cycle | Base Insertion | 25052 | 0.73 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 92 | Cycle | Base Deletion | 25052 | 0.75 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 93 | Cycle | Base Substitution | 25243 | 42.13 | 29.00 | 30.49 | -1.49 | Before |
| REGRESSION.HCC1395_tumor.L003 | 93 | Cycle | Base Insertion | 25017 | 0.83 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 93 | Cycle | Base Deletion | 25017 | 0.85 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 94 | Cycle | Base Substitution | 25258 | 56.77 | 29.00 | 30.67 | -1.67 | Before |
| REGRESSION.HCC1395_tumor.L003 | 94 | Cycle | Base Insertion | 25021 | 0.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 94 | Cycle | Base Deletion | 25021 | 0.79 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 95 | Cycle | Base Substitution | 25204 | 40.73 | 29.00 | 30.41 | -1.41 | Before |
| REGRESSION.HCC1395_tumor.L003 | 95 | Cycle | Base Insertion | 24969 | 0.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 95 | Cycle | Base Deletion | 24969 | 0.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 96 | Cycle | Base Substitution | 25092 | 35.83 | 29.00 | 30.69 | -1.69 | Before |
| REGRESSION.HCC1395_tumor.L003 | 96 | Cycle | Base Insertion | 24855 | 0.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 96 | Cycle | Base Deletion | 24855 | 0.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 97 | Cycle | Base Substitution | 25066 | 42.38 | 29.00 | 30.44 | -1.44 | Before |
| REGRESSION.HCC1395_tumor.L003 | 97 | Cycle | Base Insertion | 24816 | 0.09 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 97 | Cycle | Base Deletion | 24816 | 0.57 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 98 | Cycle | Base Substitution | 24978 | 49.66 | 29.00 | 30.29 | -1.29 | Before |
| REGRESSION.HCC1395_tumor.L003 | 98 | Cycle | Base Insertion | 24735 | 0.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 98 | Cycle | Base Deletion | 24735 | 0.75 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 99 | Cycle | Base Substitution | 24818 | 39.60 | 29.00 | 30.57 | -1.57 | Before |
| REGRESSION.HCC1395_tumor.L003 | 99 | Cycle | Base Insertion | 24583 | 0.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 99 | Cycle | Base Deletion | 24583 | 0.75 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 12 | QualityScore | Base Substitution | 80722 | 7861.87 | 10.00 | 12.00 | -2.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 24 | QualityScore | Base Substitution | 195543 | 774.94 | 24.00 | 24.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 40 | QualityScore | Base Substitution | 7301565 | 5488.01 | 31.00 | 40.00 | -9.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 45 | QualityScore | Base Insertion | 7577830 | 147.29 | 46.00 | 45.00 | 1.00 | Before |
| REGRESSION.HCC1395_tumor.L003 | 45 | QualityScore | Base Deletion | 7577830 | 346.13 | 44.00 | 45.00 | -1.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | AA | Context | Base Substitution | 528369 | 1337.25 | 26.00 | 29.56 | -3.56 | Before |
| REGRESSION.HCC1395_tumor.L004 | AAA | Context | Base Insertion | 180223 | 19.33 | 44.00 | 45.00 | -1.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | AAA | Context | Base Deletion | 180223 | 86.82 | 41.00 | 45.00 | -4.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | AAC | Context | Base Insertion | 86227 | 1.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | AAC | Context | Base Deletion | 86227 | 1.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | AAG | Context | Base Insertion | 134837 | 1.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | AAG | Context | Base Deletion | 134837 | 5.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | AAT | Context | Base Insertion | 102502 | 0.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | AAT | Context | Base Deletion | 102502 | 1.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | AC | Context | Base Substitution | 359132 | 1151.21 | 25.00 | 28.76 | -3.76 | Before |
| REGRESSION.HCC1395_tumor.L004 | ACA | Context | Base Insertion | 132580 | 4.91 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | ACA | Context | Base Deletion | 132580 | 7.98 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | ACC | Context | Base Insertion | 104935 | 2.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | ACC | Context | Base Deletion | 104935 | 2.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | ACG | Context | Base Insertion | 20813 | 0.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | ACG | Context | Base Deletion | 20813 | 2.60 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | ACT | Context | Base Insertion | 106062 | 0.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | ACT | Context | Base Deletion | 106062 | 6.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | AG | Context | Base Substitution | 564253 | 547.47 | 30.00 | 31.87 | -1.87 | Before |
| REGRESSION.HCC1395_tumor.L004 | AGA | Context | Base Insertion | 152372 | 2.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | AGA | Context | Base Deletion | 152372 | 5.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | AGC | Context | Base Insertion | 140221 | 0.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | AGC | Context | Base Deletion | 140221 | 3.94 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | AGG | Context | Base Insertion | 163730 | 5.92 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | AGG | Context | Base Deletion | 163730 | 4.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | AGT | Context | Base Insertion | 103729 | 0.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | AGT | Context | Base Deletion | 103729 | 4.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | AT | Context | Base Substitution | 371699 | 474.93 | 29.00 | 32.11 | -3.11 | Before |
| REGRESSION.HCC1395_tumor.L004 | ATA | Context | Base Insertion | 75041 | 0.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | ATA | Context | Base Deletion | 75041 | 0.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | ATC | Context | Base Insertion | 79412 | 0.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | ATC | Context | Base Deletion | 79412 | 0.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | ATG | Context | Base Insertion | 114773 | 1.83 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | ATG | Context | Base Deletion | 114773 | 0.90 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | ATT | Context | Base Insertion | 109677 | 0.80 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | ATT | Context | Base Deletion | 109677 | 1.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | CA | Context | Base Substitution | 595390 | 1255.23 | 27.00 | 30.02 | -3.02 | Before |
| REGRESSION.HCC1395_tumor.L004 | CAA | Context | Base Insertion | 112999 | 2.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | CAA | Context | Base Deletion | 112999 | 3.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | CAC | Context | Base Insertion | 125717 | 6.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | CAC | Context | Base Deletion | 125717 | 9.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | CAG | Context | Base Insertion | 213904 | 5.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | CAG | Context | Base Deletion | 213904 | 10.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | CAT | Context | Base Insertion | 111257 | 0.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | CAT | Context | Base Deletion | 111257 | 0.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | CC | Context | Base Substitution | 551969 | 1766.61 | 25.00 | 29.02 | -4.02 | Before |
| REGRESSION.HCC1395_tumor.L004 | CCA | Context | Base Insertion | 176239 | 1.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | CCA | Context | Base Deletion | 176239 | 2.81 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | CCC | Context | Base Insertion | 151171 | 7.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | CCC | Context | Base Deletion | 151171 | 8.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | CCG | Context | Base Insertion | 37479 | 1.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | CCG | Context | Base Deletion | 37479 | 1.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | CCT | Context | Base Insertion | 178870 | 1.02 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | CCT | Context | Base Deletion | 178870 | 7.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | CG | Context | Base Substitution | 113556 | 325.74 | 26.00 | 29.84 | -3.84 | Before |
| REGRESSION.HCC1395_tumor.L004 | CGA | Context | Base Insertion | 44339 | 2.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | CGA | Context | Base Deletion | 44339 | 0.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | CGC | Context | Base Insertion | 63176 | 2.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | CGC | Context | Base Deletion | 63176 | 3.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | CGG | Context | Base Insertion | 77145 | 0.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | CGG | Context | Base Deletion | 77145 | 3.84 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | CGT | Context | Base Insertion | 49338 | 0.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | CGT | Context | Base Deletion | 49338 | 0.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | CT | Context | Base Substitution | 599584 | 440.30 | 31.00 | 32.50 | -1.50 | Before |
| REGRESSION.HCC1395_tumor.L004 | CTA | Context | Base Insertion | 58928 | 0.12 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | CTA | Context | Base Deletion | 58928 | 4.67 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | CTC | Context | Base Insertion | 146489 | 1.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | CTC | Context | Base Deletion | 146489 | 9.04 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | CTG | Context | Base Insertion | 215955 | 0.81 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | CTG | Context | Base Deletion | 215955 | 5.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | CTT | Context | Base Insertion | 146876 | 2.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | CTT | Context | Base Deletion | 146876 | 5.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | GA | Context | Base Substitution | 498300 | 828.46 | 28.00 | 29.68 | -1.68 | Before |
| REGRESSION.HCC1395_tumor.L004 | GAA | Context | Base Insertion | 141848 | 1.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | GAA | Context | Base Deletion | 141848 | 3.81 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | GAC | Context | Base Insertion | 84187 | 0.60 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | GAC | Context | Base Deletion | 84187 | 0.82 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | GAG | Context | Base Insertion | 151222 | 0.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | GAG | Context | Base Deletion | 151222 | 4.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | GAT | Context | Base Insertion | 83677 | 0.61 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | GAT | Context | Base Deletion | 83677 | 0.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | GC | Context | Base Substitution | 488791 | 1144.70 | 27.00 | 30.30 | -3.30 | Before |
| REGRESSION.HCC1395_tumor.L004 | GCA | Context | Base Insertion | 149096 | 1.99 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | GCA | Context | Base Deletion | 149096 | 4.66 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | GCC | Context | Base Insertion | 146852 | 1.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | GCC | Context | Base Deletion | 146852 | 6.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | GCG | Context | Base Insertion | 35993 | 0.93 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | GCG | Context | Base Deletion | 35993 | 1.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | GCT | Context | Base Insertion | 155755 | 1.78 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | GCT | Context | Base Deletion | 155755 | 1.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | GG | Context | Base Substitution | 578699 | 784.74 | 29.00 | 31.87 | -2.87 | Before |
| REGRESSION.HCC1395_tumor.L004 | GGA | Context | Base Insertion | 157655 | 1.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | GGA | Context | Base Deletion | 157655 | 5.02 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | GGC | Context | Base Insertion | 145268 | 1.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | GGC | Context | Base Deletion | 145268 | 4.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | GGG | Context | Base Insertion | 158783 | 4.86 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | GGG | Context | Base Deletion | 158783 | 12.94 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | GGT | Context | Base Insertion | 115129 | 0.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | GGT | Context | Base Deletion | 115129 | 1.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | GT | Context | Base Substitution | 409660 | 718.61 | 28.00 | 32.18 | -4.18 | Before |
| REGRESSION.HCC1395_tumor.L004 | GTA | Context | Base Insertion | 66658 | 1.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | GTA | Context | Base Deletion | 66658 | 0.85 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | GTC | Context | Base Insertion | 91364 | 1.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | GTC | Context | Base Deletion | 91364 | 1.07 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | GTG | Context | Base Insertion | 140367 | 1.77 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | GTG | Context | Base Deletion | 140367 | 7.98 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | GTT | Context | Base Insertion | 100735 | 0.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | GTT | Context | Base Deletion | 100735 | 1.84 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | TA | Context | Base Substitution | 290795 | 764.73 | 26.00 | 29.72 | -3.72 | Before |
| REGRESSION.HCC1395_tumor.L004 | TAA | Context | Base Insertion | 88689 | 2.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | TAA | Context | Base Deletion | 88689 | 4.88 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | TAC | Context | Base Insertion | 60703 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | TAC | Context | Base Deletion | 60703 | 4.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | TAG | Context | Base Insertion | 59875 | 0.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | TAG | Context | Base Deletion | 59875 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | TAT | Context | Base Insertion | 71574 | 0.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | TAT | Context | Base Deletion | 71574 | 0.83 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | TC | Context | Base Substitution | 450419 | 1084.58 | 26.00 | 30.66 | -4.66 | Before |
| REGRESSION.HCC1395_tumor.L004 | TCA | Context | Base Insertion | 132802 | 2.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | TCA | Context | Base Deletion | 132802 | 6.03 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | TCC | Context | Base Insertion | 145331 | 1.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | TCC | Context | Base Deletion | 145331 | 2.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | TCG | Context | Base Insertion | 18421 | 0.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | TCG | Context | Base Deletion | 18421 | 0.21 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | TCT | Context | Base Insertion | 154694 | 1.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | TCT | Context | Base Deletion | 154694 | 7.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | TG | Context | Base Substitution | 590176 | 453.59 | 31.00 | 31.83 | -0.83 | Before |
| REGRESSION.HCC1395_tumor.L004 | TGA | Context | Base Insertion | 140059 | 0.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | TGA | Context | Base Deletion | 140059 | 1.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | TGC | Context | Base Insertion | 137015 | 1.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | TGC | Context | Base Deletion | 137015 | 3.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | TGG | Context | Base Insertion | 174719 | 1.61 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | TGG | Context | Base Deletion | 174719 | 1.97 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | TGT | Context | Base Insertion | 138736 | 1.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | TGT | Context | Base Deletion | 138736 | 8.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | TT | Context | Base Substitution | 543064 | 710.55 | 29.00 | 32.82 | -3.82 | Before |
| REGRESSION.HCC1395_tumor.L004 | TTA | Context | Base Insertion | 87905 | 1.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | TTA | Context | Base Deletion | 87905 | 4.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | TTC | Context | Base Insertion | 130371 | 0.69 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | TTC | Context | Base Deletion | 130371 | 5.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | TTG | Context | Base Insertion | 114897 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | TTG | Context | Base Deletion | 114897 | 1.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | TTT | Context | Base Insertion | 182084 | 20.65 | 44.00 | 45.00 | -1.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | TTT | Context | Base Deletion | 182084 | 52.06 | 43.00 | 45.00 | -2.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -1 | Cycle | Base Substitution | 26767 | 93.64 | 25.00 | 25.71 | -0.71 | Before |
| REGRESSION.HCC1395_tumor.L004 | -10 | Cycle | Base Substitution | 27032 | 30.48 | 31.00 | 31.49 | -0.49 | Before |
| REGRESSION.HCC1395_tumor.L004 | -10 | Cycle | Base Insertion | 27032 | 0.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -10 | Cycle | Base Deletion | 27032 | 0.74 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -100 | Cycle | Base Substitution | 24926 | 50.18 | 29.00 | 30.05 | -1.05 | Before |
| REGRESSION.HCC1395_tumor.L004 | -100 | Cycle | Base Insertion | 24694 | 0.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -100 | Cycle | Base Deletion | 24694 | 1.03 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -101 | Cycle | Base Substitution | 24874 | 45.33 | 29.00 | 30.21 | -1.21 | Before |
| REGRESSION.HCC1395_tumor.L004 | -101 | Cycle | Base Insertion | 24620 | 0.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -101 | Cycle | Base Deletion | 24620 | 1.61 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -102 | Cycle | Base Substitution | 24974 | 45.40 | 29.00 | 30.30 | -1.30 | Before |
| REGRESSION.HCC1395_tumor.L004 | -102 | Cycle | Base Insertion | 24703 | 0.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -102 | Cycle | Base Deletion | 24703 | 1.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -103 | Cycle | Base Substitution | 24948 | 39.57 | 29.00 | 29.96 | -0.96 | Before |
| REGRESSION.HCC1395_tumor.L004 | -103 | Cycle | Base Insertion | 24651 | 0.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -103 | Cycle | Base Deletion | 24651 | 1.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -104 | Cycle | Base Substitution | 24720 | 47.00 | 28.00 | 29.84 | -1.84 | Before |
| REGRESSION.HCC1395_tumor.L004 | -104 | Cycle | Base Insertion | 24437 | 0.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -104 | Cycle | Base Deletion | 24437 | 1.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -105 | Cycle | Base Substitution | 24781 | 50.86 | 29.00 | 30.35 | -1.35 | Before |
| REGRESSION.HCC1395_tumor.L004 | -105 | Cycle | Base Insertion | 24510 | 0.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -105 | Cycle | Base Deletion | 24510 | 1.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -106 | Cycle | Base Substitution | 24694 | 43.11 | 29.00 | 30.35 | -1.35 | Before |
| REGRESSION.HCC1395_tumor.L004 | -106 | Cycle | Base Insertion | 24419 | 0.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -106 | Cycle | Base Deletion | 24419 | 0.85 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -107 | Cycle | Base Substitution | 24479 | 46.22 | 29.00 | 30.30 | -1.30 | Before |
| REGRESSION.HCC1395_tumor.L004 | -107 | Cycle | Base Insertion | 24224 | 0.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -107 | Cycle | Base Deletion | 24224 | 0.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -108 | Cycle | Base Substitution | 24476 | 31.75 | 30.00 | 30.22 | -0.22 | Before |
| REGRESSION.HCC1395_tumor.L004 | -108 | Cycle | Base Insertion | 24221 | 0.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -108 | Cycle | Base Deletion | 24221 | 0.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -109 | Cycle | Base Substitution | 24407 | 47.46 | 29.00 | 30.14 | -1.14 | Before |
| REGRESSION.HCC1395_tumor.L004 | -109 | Cycle | Base Insertion | 24146 | 0.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -109 | Cycle | Base Deletion | 24146 | 0.99 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -11 | Cycle | Base Substitution | 26983 | 33.08 | 30.00 | 31.44 | -1.44 | Before |
| REGRESSION.HCC1395_tumor.L004 | -11 | Cycle | Base Insertion | 26982 | 0.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -11 | Cycle | Base Deletion | 26982 | 0.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -110 | Cycle | Base Substitution | 24351 | 39.97 | 29.00 | 30.21 | -1.21 | Before |
| REGRESSION.HCC1395_tumor.L004 | -110 | Cycle | Base Insertion | 24057 | 0.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -110 | Cycle | Base Deletion | 24057 | 0.83 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -111 | Cycle | Base Substitution | 24334 | 53.04 | 29.00 | 30.34 | -1.34 | Before |
| REGRESSION.HCC1395_tumor.L004 | -111 | Cycle | Base Insertion | 24044 | 0.61 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -111 | Cycle | Base Deletion | 24044 | 1.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -112 | Cycle | Base Substitution | 24274 | 45.47 | 29.00 | 30.20 | -1.20 | Before |
| REGRESSION.HCC1395_tumor.L004 | -112 | Cycle | Base Insertion | 23998 | 0.52 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -112 | Cycle | Base Deletion | 23998 | 1.73 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -113 | Cycle | Base Substitution | 24092 | 38.71 | 29.00 | 29.84 | -0.84 | Before |
| REGRESSION.HCC1395_tumor.L004 | -113 | Cycle | Base Insertion | 23800 | 0.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -113 | Cycle | Base Deletion | 23800 | 1.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -114 | Cycle | Base Substitution | 24176 | 47.89 | 29.00 | 30.03 | -1.03 | Before |
| REGRESSION.HCC1395_tumor.L004 | -114 | Cycle | Base Insertion | 23907 | 0.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -114 | Cycle | Base Deletion | 23907 | 0.86 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -115 | Cycle | Base Substitution | 24046 | 48.69 | 29.00 | 30.02 | -1.02 | Before |
| REGRESSION.HCC1395_tumor.L004 | -115 | Cycle | Base Insertion | 23763 | 0.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -115 | Cycle | Base Deletion | 23763 | 0.69 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -116 | Cycle | Base Substitution | 24022 | 41.52 | 29.00 | 30.11 | -1.11 | Before |
| REGRESSION.HCC1395_tumor.L004 | -116 | Cycle | Base Insertion | 23757 | 0.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -116 | Cycle | Base Deletion | 23757 | 0.90 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -117 | Cycle | Base Substitution | 23824 | 50.69 | 29.00 | 30.08 | -1.08 | Before |
| REGRESSION.HCC1395_tumor.L004 | -117 | Cycle | Base Insertion | 23567 | 0.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -117 | Cycle | Base Deletion | 23567 | 1.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -118 | Cycle | Base Substitution | 23889 | 53.97 | 29.00 | 30.34 | -1.34 | Before |
| REGRESSION.HCC1395_tumor.L004 | -118 | Cycle | Base Insertion | 23638 | 0.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -118 | Cycle | Base Deletion | 23638 | 1.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -119 | Cycle | Base Substitution | 23931 | 62.40 | 28.00 | 29.71 | -1.71 | Before |
| REGRESSION.HCC1395_tumor.L004 | -119 | Cycle | Base Insertion | 23678 | 0.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -119 | Cycle | Base Deletion | 23678 | 1.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -12 | Cycle | Base Substitution | 27062 | 37.39 | 30.00 | 31.60 | -1.60 | Before |
| REGRESSION.HCC1395_tumor.L004 | -12 | Cycle | Base Insertion | 27061 | 0.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -12 | Cycle | Base Deletion | 27061 | 1.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -120 | Cycle | Base Substitution | 23777 | 49.29 | 29.00 | 30.10 | -1.10 | Before |
| REGRESSION.HCC1395_tumor.L004 | -120 | Cycle | Base Insertion | 23506 | 0.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -120 | Cycle | Base Deletion | 23506 | 1.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -121 | Cycle | Base Substitution | 23636 | 43.82 | 29.00 | 30.20 | -1.20 | Before |
| REGRESSION.HCC1395_tumor.L004 | -121 | Cycle | Base Insertion | 23343 | 0.62 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -121 | Cycle | Base Deletion | 23343 | 1.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -122 | Cycle | Base Substitution | 23669 | 49.95 | 28.00 | 29.73 | -1.73 | Before |
| REGRESSION.HCC1395_tumor.L004 | -122 | Cycle | Base Insertion | 23365 | 0.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -122 | Cycle | Base Deletion | 23365 | 0.90 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -123 | Cycle | Base Substitution | 23554 | 49.23 | 28.00 | 29.90 | -1.90 | Before |
| REGRESSION.HCC1395_tumor.L004 | -123 | Cycle | Base Insertion | 23217 | 0.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -123 | Cycle | Base Deletion | 23217 | 1.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -124 | Cycle | Base Substitution | 23564 | 45.93 | 28.00 | 29.87 | -1.87 | Before |
| REGRESSION.HCC1395_tumor.L004 | -124 | Cycle | Base Insertion | 23228 | 0.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -124 | Cycle | Base Deletion | 23228 | 1.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -125 | Cycle | Base Substitution | 23382 | 47.52 | 28.00 | 29.97 | -1.97 | Before |
| REGRESSION.HCC1395_tumor.L004 | -125 | Cycle | Base Insertion | 23054 | 0.52 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -125 | Cycle | Base Deletion | 23054 | 0.90 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -126 | Cycle | Base Substitution | 23347 | 46.28 | 28.00 | 29.98 | -1.98 | Before |
| REGRESSION.HCC1395_tumor.L004 | -126 | Cycle | Base Insertion | 23013 | 0.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -126 | Cycle | Base Deletion | 23013 | 0.92 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -127 | Cycle | Base Substitution | 23316 | 39.04 | 29.00 | 30.01 | -1.01 | Before |
| REGRESSION.HCC1395_tumor.L004 | -127 | Cycle | Base Insertion | 22992 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -127 | Cycle | Base Deletion | 22992 | 0.96 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -128 | Cycle | Base Substitution | 23182 | 44.64 | 28.00 | 29.44 | -1.44 | Before |
| REGRESSION.HCC1395_tumor.L004 | -128 | Cycle | Base Insertion | 22869 | 0.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -128 | Cycle | Base Deletion | 22869 | 0.89 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -129 | Cycle | Base Substitution | 23146 | 54.52 | 29.00 | 30.11 | -1.11 | Before |
| REGRESSION.HCC1395_tumor.L004 | -129 | Cycle | Base Insertion | 22796 | 1.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -129 | Cycle | Base Deletion | 22796 | 0.76 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -13 | Cycle | Base Substitution | 27024 | 32.94 | 30.00 | 31.57 | -1.57 | Before |
| REGRESSION.HCC1395_tumor.L004 | -13 | Cycle | Base Insertion | 27023 | 0.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -13 | Cycle | Base Deletion | 27023 | 1.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -130 | Cycle | Base Substitution | 23054 | 43.80 | 28.00 | 29.63 | -1.63 | Before |
| REGRESSION.HCC1395_tumor.L004 | -130 | Cycle | Base Insertion | 22733 | 0.69 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -130 | Cycle | Base Deletion | 22733 | 0.82 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -131 | Cycle | Base Substitution | 22907 | 43.28 | 28.00 | 29.86 | -1.86 | Before |
| REGRESSION.HCC1395_tumor.L004 | -131 | Cycle | Base Insertion | 22574 | 1.61 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -131 | Cycle | Base Deletion | 22574 | 0.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -132 | Cycle | Base Substitution | 22906 | 43.11 | 28.00 | 29.85 | -1.85 | Before |
| REGRESSION.HCC1395_tumor.L004 | -132 | Cycle | Base Insertion | 22568 | 0.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -132 | Cycle | Base Deletion | 22568 | 0.74 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -133 | Cycle | Base Substitution | 22856 | 47.23 | 28.00 | 29.62 | -1.62 | Before |
| REGRESSION.HCC1395_tumor.L004 | -133 | Cycle | Base Insertion | 22531 | 0.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -133 | Cycle | Base Deletion | 22531 | 0.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -134 | Cycle | Base Substitution | 22776 | 44.65 | 29.00 | 30.13 | -1.13 | Before |
| REGRESSION.HCC1395_tumor.L004 | -134 | Cycle | Base Insertion | 22442 | 0.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -134 | Cycle | Base Deletion | 22442 | 0.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -135 | Cycle | Base Substitution | 22706 | 44.17 | 29.00 | 30.15 | -1.15 | Before |
| REGRESSION.HCC1395_tumor.L004 | -135 | Cycle | Base Insertion | 22374 | 0.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -135 | Cycle | Base Deletion | 22374 | 0.91 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -136 | Cycle | Base Substitution | 22625 | 41.94 | 28.00 | 29.98 | -1.98 | Before |
| REGRESSION.HCC1395_tumor.L004 | -136 | Cycle | Base Insertion | 22296 | 0.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -136 | Cycle | Base Deletion | 22296 | 0.84 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -137 | Cycle | Base Substitution | 22556 | 44.72 | 28.00 | 29.91 | -1.91 | Before |
| REGRESSION.HCC1395_tumor.L004 | -137 | Cycle | Base Insertion | 22206 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -137 | Cycle | Base Deletion | 22206 | 0.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -138 | Cycle | Base Substitution | 22408 | 40.93 | 28.00 | 29.84 | -1.84 | Before |
| REGRESSION.HCC1395_tumor.L004 | -138 | Cycle | Base Insertion | 22091 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -138 | Cycle | Base Deletion | 22091 | 0.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -139 | Cycle | Base Substitution | 22406 | 49.17 | 28.00 | 29.61 | -1.61 | Before |
| REGRESSION.HCC1395_tumor.L004 | -139 | Cycle | Base Insertion | 22056 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -139 | Cycle | Base Deletion | 22056 | 0.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -14 | Cycle | Base Substitution | 26950 | 33.64 | 30.00 | 31.82 | -1.82 | Before |
| REGRESSION.HCC1395_tumor.L004 | -14 | Cycle | Base Insertion | 26949 | 0.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -14 | Cycle | Base Deletion | 26949 | 1.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -140 | Cycle | Base Substitution | 22247 | 46.33 | 28.00 | 29.83 | -1.83 | Before |
| REGRESSION.HCC1395_tumor.L004 | -140 | Cycle | Base Insertion | 21882 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -140 | Cycle | Base Deletion | 21882 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -141 | Cycle | Base Substitution | 22180 | 46.07 | 28.00 | 29.69 | -1.69 | Before |
| REGRESSION.HCC1395_tumor.L004 | -141 | Cycle | Base Insertion | 21787 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -141 | Cycle | Base Deletion | 21787 | 0.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -142 | Cycle | Base Substitution | 22212 | 43.66 | 28.00 | 29.91 | -1.91 | Before |
| REGRESSION.HCC1395_tumor.L004 | -142 | Cycle | Base Insertion | 21794 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -142 | Cycle | Base Deletion | 21794 | 0.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -143 | Cycle | Base Substitution | 21999 | 51.72 | 28.00 | 29.82 | -1.82 | Before |
| REGRESSION.HCC1395_tumor.L004 | -143 | Cycle | Base Insertion | 21561 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -143 | Cycle | Base Deletion | 21561 | 0.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -144 | Cycle | Base Substitution | 21964 | 40.90 | 28.00 | 29.84 | -1.84 | Before |
| REGRESSION.HCC1395_tumor.L004 | -144 | Cycle | Base Insertion | 21506 | 0.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -144 | Cycle | Base Deletion | 21506 | 0.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -145 | Cycle | Base Substitution | 21996 | 49.29 | 28.00 | 29.80 | -1.80 | Before |
| REGRESSION.HCC1395_tumor.L004 | -145 | Cycle | Base Insertion | 16855 | 0.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -145 | Cycle | Base Deletion | 16855 | 0.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -146 | Cycle | Base Substitution | 21876 | 71.20 | 27.00 | 29.76 | -2.76 | Before |
| REGRESSION.HCC1395_tumor.L004 | -146 | Cycle | Base Insertion | 16814 | 0.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -146 | Cycle | Base Deletion | 16814 | 0.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -147 | Cycle | Base Substitution | 21740 | 246.58 | 22.00 | 29.95 | -7.95 | Before |
| REGRESSION.HCC1395_tumor.L004 | -148 | Cycle | Base Substitution | 21526 | 857.11 | 15.00 | 30.05 | -15.05 | Before |
| REGRESSION.HCC1395_tumor.L004 | -149 | Cycle | Base Substitution | 13357 | 799.31 | 14.00 | 30.49 | -16.49 | Before |
| REGRESSION.HCC1395_tumor.L004 | -15 | Cycle | Base Substitution | 27019 | 29.80 | 31.00 | 31.72 | -0.72 | Before |
| REGRESSION.HCC1395_tumor.L004 | -15 | Cycle | Base Insertion | 27019 | 0.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -15 | Cycle | Base Deletion | 27019 | 1.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -150 | Cycle | Base Substitution | 4653 | 10.82 | 29.00 | 29.65 | -0.65 | Before |
| REGRESSION.HCC1395_tumor.L004 | -16 | Cycle | Base Substitution | 27086 | 37.39 | 30.00 | 31.60 | -1.60 | Before |
| REGRESSION.HCC1395_tumor.L004 | -16 | Cycle | Base Insertion | 27086 | 0.65 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -16 | Cycle | Base Deletion | 27086 | 2.01 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -17 | Cycle | Base Substitution | 26965 | 37.54 | 30.00 | 31.68 | -1.68 | Before |
| REGRESSION.HCC1395_tumor.L004 | -17 | Cycle | Base Insertion | 26965 | 0.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -17 | Cycle | Base Deletion | 26965 | 1.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -18 | Cycle | Base Substitution | 26840 | 38.99 | 30.00 | 31.87 | -1.87 | Before |
| REGRESSION.HCC1395_tumor.L004 | -18 | Cycle | Base Insertion | 26840 | 0.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -18 | Cycle | Base Deletion | 26840 | 2.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -19 | Cycle | Base Substitution | 26907 | 45.19 | 30.00 | 31.42 | -1.42 | Before |
| REGRESSION.HCC1395_tumor.L004 | -19 | Cycle | Base Insertion | 26907 | 0.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -19 | Cycle | Base Deletion | 26907 | 2.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -2 | Cycle | Base Substitution | 27161 | 77.24 | 27.00 | 28.47 | -1.47 | Before |
| REGRESSION.HCC1395_tumor.L004 | -20 | Cycle | Base Substitution | 26924 | 42.23 | 31.00 | 32.13 | -1.13 | Before |
| REGRESSION.HCC1395_tumor.L004 | -20 | Cycle | Base Insertion | 26924 | 0.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -20 | Cycle | Base Deletion | 26924 | 2.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -21 | Cycle | Base Substitution | 26919 | 32.45 | 30.00 | 31.90 | -1.90 | Before |
| REGRESSION.HCC1395_tumor.L004 | -21 | Cycle | Base Insertion | 26919 | 0.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -21 | Cycle | Base Deletion | 26919 | 3.04 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -22 | Cycle | Base Substitution | 26937 | 36.62 | 30.00 | 31.88 | -1.88 | Before |
| REGRESSION.HCC1395_tumor.L004 | -22 | Cycle | Base Insertion | 26937 | 0.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -22 | Cycle | Base Deletion | 26937 | 2.87 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -23 | Cycle | Base Substitution | 26983 | 39.31 | 30.00 | 31.54 | -1.54 | Before |
| REGRESSION.HCC1395_tumor.L004 | -23 | Cycle | Base Insertion | 26983 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -23 | Cycle | Base Deletion | 26983 | 2.75 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -24 | Cycle | Base Substitution | 26885 | 36.24 | 30.00 | 31.83 | -1.83 | Before |
| REGRESSION.HCC1395_tumor.L004 | -24 | Cycle | Base Insertion | 26885 | 0.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -24 | Cycle | Base Deletion | 26885 | 2.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -25 | Cycle | Base Substitution | 26874 | 31.07 | 31.00 | 31.58 | -0.58 | Before |
| REGRESSION.HCC1395_tumor.L004 | -25 | Cycle | Base Insertion | 26874 | 0.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -25 | Cycle | Base Deletion | 26874 | 2.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -26 | Cycle | Base Substitution | 26865 | 45.66 | 29.00 | 30.40 | -1.40 | Before |
| REGRESSION.HCC1395_tumor.L004 | -26 | Cycle | Base Insertion | 26865 | 0.57 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -26 | Cycle | Base Deletion | 26865 | 2.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -27 | Cycle | Base Substitution | 26906 | 31.39 | 30.00 | 30.40 | -0.40 | Before |
| REGRESSION.HCC1395_tumor.L004 | -27 | Cycle | Base Insertion | 26906 | 0.65 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -27 | Cycle | Base Deletion | 26906 | 1.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -28 | Cycle | Base Substitution | 26829 | 40.41 | 29.00 | 30.57 | -1.57 | Before |
| REGRESSION.HCC1395_tumor.L004 | -28 | Cycle | Base Insertion | 26828 | 0.57 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -28 | Cycle | Base Deletion | 26828 | 1.61 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -29 | Cycle | Base Substitution | 26894 | 50.43 | 29.00 | 30.10 | -1.10 | Before |
| REGRESSION.HCC1395_tumor.L004 | -29 | Cycle | Base Insertion | 26892 | 0.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -29 | Cycle | Base Deletion | 26892 | 1.69 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -3 | Cycle | Base Substitution | 27187 | 78.59 | 27.00 | 29.85 | -2.85 | Before |
| REGRESSION.HCC1395_tumor.L004 | -30 | Cycle | Base Substitution | 26922 | 40.22 | 29.00 | 30.48 | -1.48 | Before |
| REGRESSION.HCC1395_tumor.L004 | -30 | Cycle | Base Insertion | 26920 | 0.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -30 | Cycle | Base Deletion | 26920 | 1.75 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -31 | Cycle | Base Substitution | 26816 | 41.59 | 29.00 | 30.28 | -1.28 | Before |
| REGRESSION.HCC1395_tumor.L004 | -31 | Cycle | Base Insertion | 26814 | 0.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -31 | Cycle | Base Deletion | 26814 | 1.74 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -32 | Cycle | Base Substitution | 26945 | 30.94 | 30.00 | 30.49 | -0.49 | Before |
| REGRESSION.HCC1395_tumor.L004 | -32 | Cycle | Base Insertion | 26943 | 1.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -32 | Cycle | Base Deletion | 26943 | 2.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -33 | Cycle | Base Substitution | 26781 | 36.50 | 30.00 | 30.57 | -0.57 | Before |
| REGRESSION.HCC1395_tumor.L004 | -33 | Cycle | Base Insertion | 26779 | 1.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -33 | Cycle | Base Deletion | 26779 | 1.85 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -34 | Cycle | Base Substitution | 26774 | 29.92 | 30.00 | 30.55 | -0.55 | Before |
| REGRESSION.HCC1395_tumor.L004 | -34 | Cycle | Base Insertion | 26773 | 1.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -34 | Cycle | Base Deletion | 26773 | 2.07 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -35 | Cycle | Base Substitution | 26805 | 36.86 | 30.00 | 30.46 | -0.46 | Before |
| REGRESSION.HCC1395_tumor.L004 | -35 | Cycle | Base Insertion | 26803 | 0.88 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -35 | Cycle | Base Deletion | 26803 | 1.84 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -36 | Cycle | Base Substitution | 26822 | 38.80 | 29.00 | 30.48 | -1.48 | Before |
| REGRESSION.HCC1395_tumor.L004 | -36 | Cycle | Base Insertion | 26821 | 0.93 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -36 | Cycle | Base Deletion | 26821 | 1.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -37 | Cycle | Base Substitution | 26711 | 34.58 | 30.00 | 30.44 | -0.44 | Before |
| REGRESSION.HCC1395_tumor.L004 | -37 | Cycle | Base Insertion | 26710 | 0.85 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -37 | Cycle | Base Deletion | 26710 | 1.89 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -38 | Cycle | Base Substitution | 26742 | 37.66 | 29.00 | 30.38 | -1.38 | Before |
| REGRESSION.HCC1395_tumor.L004 | -38 | Cycle | Base Insertion | 26741 | 0.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -38 | Cycle | Base Deletion | 26741 | 1.78 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -39 | Cycle | Base Substitution | 26778 | 43.94 | 29.00 | 30.06 | -1.06 | Before |
| REGRESSION.HCC1395_tumor.L004 | -39 | Cycle | Base Insertion | 26777 | 0.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -39 | Cycle | Base Deletion | 26777 | 1.79 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -4 | Cycle | Base Substitution | 27102 | 81.26 | 27.00 | 29.87 | -2.87 | Before |
| REGRESSION.HCC1395_tumor.L004 | -40 | Cycle | Base Substitution | 26747 | 32.25 | 30.00 | 30.70 | -0.70 | Before |
| REGRESSION.HCC1395_tumor.L004 | -40 | Cycle | Base Insertion | 26742 | 1.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -40 | Cycle | Base Deletion | 26742 | 2.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -41 | Cycle | Base Substitution | 26677 | 40.11 | 29.00 | 30.54 | -1.54 | Before |
| REGRESSION.HCC1395_tumor.L004 | -41 | Cycle | Base Insertion | 26673 | 0.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -41 | Cycle | Base Deletion | 26673 | 2.01 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -42 | Cycle | Base Substitution | 26608 | 48.06 | 29.00 | 30.27 | -1.27 | Before |
| REGRESSION.HCC1395_tumor.L004 | -42 | Cycle | Base Insertion | 26605 | 0.65 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -42 | Cycle | Base Deletion | 26605 | 1.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -43 | Cycle | Base Substitution | 26700 | 27.61 | 30.00 | 30.47 | -0.47 | Before |
| REGRESSION.HCC1395_tumor.L004 | -43 | Cycle | Base Insertion | 26696 | 0.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -43 | Cycle | Base Deletion | 26696 | 1.78 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -44 | Cycle | Base Substitution | 26676 | 33.15 | 30.00 | 30.71 | -0.71 | Before |
| REGRESSION.HCC1395_tumor.L004 | -44 | Cycle | Base Insertion | 26673 | 0.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -44 | Cycle | Base Deletion | 26673 | 1.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -45 | Cycle | Base Substitution | 26730 | 35.35 | 30.00 | 30.63 | -0.63 | Before |
| REGRESSION.HCC1395_tumor.L004 | -45 | Cycle | Base Insertion | 26727 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -45 | Cycle | Base Deletion | 26727 | 1.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -46 | Cycle | Base Substitution | 26676 | 38.88 | 29.00 | 30.29 | -1.29 | Before |
| REGRESSION.HCC1395_tumor.L004 | -46 | Cycle | Base Insertion | 26674 | 0.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -46 | Cycle | Base Deletion | 26674 | 1.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -47 | Cycle | Base Substitution | 26604 | 48.69 | 29.00 | 30.14 | -1.14 | Before |
| REGRESSION.HCC1395_tumor.L004 | -47 | Cycle | Base Insertion | 26597 | 0.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -47 | Cycle | Base Deletion | 26597 | 1.52 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -48 | Cycle | Base Substitution | 26688 | 44.33 | 29.00 | 30.58 | -1.58 | Before |
| REGRESSION.HCC1395_tumor.L004 | -48 | Cycle | Base Insertion | 26682 | 0.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -48 | Cycle | Base Deletion | 26682 | 1.88 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -49 | Cycle | Base Substitution | 26705 | 39.55 | 29.00 | 30.52 | -1.52 | Before |
| REGRESSION.HCC1395_tumor.L004 | -49 | Cycle | Base Insertion | 26698 | 0.57 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -49 | Cycle | Base Deletion | 26698 | 1.87 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -5 | Cycle | Base Substitution | 27190 | 48.72 | 29.00 | 30.69 | -1.69 | Before |
| REGRESSION.HCC1395_tumor.L004 | -5 | Cycle | Base Insertion | 27190 | 0.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -5 | Cycle | Base Deletion | 27190 | 0.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -50 | Cycle | Base Substitution | 26685 | 38.77 | 29.00 | 30.68 | -1.68 | Before |
| REGRESSION.HCC1395_tumor.L004 | -50 | Cycle | Base Insertion | 26674 | 0.90 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -50 | Cycle | Base Deletion | 26674 | 1.67 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -51 | Cycle | Base Substitution | 26572 | 43.89 | 29.00 | 30.73 | -1.73 | Before |
| REGRESSION.HCC1395_tumor.L004 | -51 | Cycle | Base Insertion | 26565 | 0.97 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -51 | Cycle | Base Deletion | 26565 | 1.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -52 | Cycle | Base Substitution | 26553 | 35.87 | 30.00 | 30.49 | -0.49 | Before |
| REGRESSION.HCC1395_tumor.L004 | -52 | Cycle | Base Insertion | 26543 | 0.83 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -52 | Cycle | Base Deletion | 26543 | 1.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -53 | Cycle | Base Substitution | 26671 | 29.89 | 30.00 | 31.00 | -1.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -53 | Cycle | Base Insertion | 26656 | 0.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -53 | Cycle | Base Deletion | 26656 | 1.91 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -54 | Cycle | Base Substitution | 26564 | 42.30 | 29.00 | 30.61 | -1.61 | Before |
| REGRESSION.HCC1395_tumor.L004 | -54 | Cycle | Base Insertion | 26542 | 0.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -54 | Cycle | Base Deletion | 26542 | 1.83 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -55 | Cycle | Base Substitution | 26499 | 47.60 | 29.00 | 30.41 | -1.41 | Before |
| REGRESSION.HCC1395_tumor.L004 | -55 | Cycle | Base Insertion | 26470 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -55 | Cycle | Base Deletion | 26470 | 1.60 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -56 | Cycle | Base Substitution | 26606 | 35.90 | 30.00 | 30.55 | -0.55 | Before |
| REGRESSION.HCC1395_tumor.L004 | -56 | Cycle | Base Insertion | 26562 | 0.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -56 | Cycle | Base Deletion | 26562 | 1.91 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -57 | Cycle | Base Substitution | 26530 | 39.57 | 29.00 | 30.59 | -1.59 | Before |
| REGRESSION.HCC1395_tumor.L004 | -57 | Cycle | Base Insertion | 26477 | 0.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -57 | Cycle | Base Deletion | 26477 | 1.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -58 | Cycle | Base Substitution | 26629 | 34.08 | 30.00 | 30.57 | -0.57 | Before |
| REGRESSION.HCC1395_tumor.L004 | -58 | Cycle | Base Insertion | 26572 | 1.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -58 | Cycle | Base Deletion | 26572 | 1.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -59 | Cycle | Base Substitution | 26590 | 51.92 | 29.00 | 30.74 | -1.74 | Before |
| REGRESSION.HCC1395_tumor.L004 | -59 | Cycle | Base Insertion | 26535 | 0.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -59 | Cycle | Base Deletion | 26535 | 1.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -6 | Cycle | Base Substitution | 26994 | 47.59 | 29.00 | 30.59 | -1.59 | Before |
| REGRESSION.HCC1395_tumor.L004 | -6 | Cycle | Base Insertion | 26994 | 0.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -6 | Cycle | Base Deletion | 26994 | 0.03 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -60 | Cycle | Base Substitution | 26563 | 34.57 | 30.00 | 30.83 | -0.83 | Before |
| REGRESSION.HCC1395_tumor.L004 | -60 | Cycle | Base Insertion | 26510 | 0.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -60 | Cycle | Base Deletion | 26510 | 0.93 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -61 | Cycle | Base Substitution | 26460 | 40.22 | 29.00 | 30.70 | -1.70 | Before |
| REGRESSION.HCC1395_tumor.L004 | -61 | Cycle | Base Insertion | 26405 | 0.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -61 | Cycle | Base Deletion | 26405 | 0.79 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -62 | Cycle | Base Substitution | 26549 | 62.39 | 29.00 | 30.50 | -1.50 | Before |
| REGRESSION.HCC1395_tumor.L004 | -62 | Cycle | Base Insertion | 26495 | 0.82 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -62 | Cycle | Base Deletion | 26495 | 0.77 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -63 | Cycle | Base Substitution | 26488 | 41.84 | 29.00 | 30.61 | -1.61 | Before |
| REGRESSION.HCC1395_tumor.L004 | -63 | Cycle | Base Insertion | 26427 | 0.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -63 | Cycle | Base Deletion | 26427 | 1.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -64 | Cycle | Base Substitution | 26503 | 36.04 | 30.00 | 30.70 | -0.70 | Before |
| REGRESSION.HCC1395_tumor.L004 | -64 | Cycle | Base Insertion | 26440 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -64 | Cycle | Base Deletion | 26440 | 1.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -65 | Cycle | Base Substitution | 26565 | 37.90 | 29.00 | 30.51 | -1.51 | Before |
| REGRESSION.HCC1395_tumor.L004 | -65 | Cycle | Base Insertion | 26498 | 0.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -65 | Cycle | Base Deletion | 26498 | 1.90 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -66 | Cycle | Base Substitution | 26493 | 40.51 | 29.00 | 30.64 | -1.64 | Before |
| REGRESSION.HCC1395_tumor.L004 | -66 | Cycle | Base Insertion | 26425 | 0.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -66 | Cycle | Base Deletion | 26425 | 1.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -67 | Cycle | Base Substitution | 26425 | 38.20 | 29.00 | 30.61 | -1.61 | Before |
| REGRESSION.HCC1395_tumor.L004 | -67 | Cycle | Base Insertion | 26331 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -67 | Cycle | Base Deletion | 26331 | 1.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -68 | Cycle | Base Substitution | 26410 | 42.43 | 29.00 | 30.80 | -1.80 | Before |
| REGRESSION.HCC1395_tumor.L004 | -68 | Cycle | Base Insertion | 26308 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -68 | Cycle | Base Deletion | 26308 | 1.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -69 | Cycle | Base Substitution | 26399 | 46.18 | 29.00 | 30.84 | -1.84 | Before |
| REGRESSION.HCC1395_tumor.L004 | -69 | Cycle | Base Insertion | 26297 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -69 | Cycle | Base Deletion | 26297 | 1.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -7 | Cycle | Base Substitution | 26895 | 49.05 | 29.00 | 30.55 | -1.55 | Before |
| REGRESSION.HCC1395_tumor.L004 | -7 | Cycle | Base Insertion | 26895 | 0.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -7 | Cycle | Base Deletion | 26895 | 0.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -70 | Cycle | Base Substitution | 26374 | 52.01 | 29.00 | 30.56 | -1.56 | Before |
| REGRESSION.HCC1395_tumor.L004 | -70 | Cycle | Base Insertion | 26275 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -70 | Cycle | Base Deletion | 26275 | 1.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -71 | Cycle | Base Substitution | 26384 | 46.74 | 29.00 | 30.61 | -1.61 | Before |
| REGRESSION.HCC1395_tumor.L004 | -71 | Cycle | Base Insertion | 26292 | 0.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -71 | Cycle | Base Deletion | 26292 | 1.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -72 | Cycle | Base Substitution | 26283 | 39.92 | 29.00 | 30.75 | -1.75 | Before |
| REGRESSION.HCC1395_tumor.L004 | -72 | Cycle | Base Insertion | 26177 | 0.97 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -72 | Cycle | Base Deletion | 26177 | 1.79 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -73 | Cycle | Base Substitution | 26274 | 35.08 | 30.00 | 30.68 | -0.68 | Before |
| REGRESSION.HCC1395_tumor.L004 | -73 | Cycle | Base Insertion | 26152 | 0.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -73 | Cycle | Base Deletion | 26152 | 1.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -74 | Cycle | Base Substitution | 26205 | 37.60 | 29.00 | 30.32 | -1.32 | Before |
| REGRESSION.HCC1395_tumor.L004 | -74 | Cycle | Base Insertion | 26063 | 0.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -74 | Cycle | Base Deletion | 26063 | 1.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -75 | Cycle | Base Substitution | 26291 | 40.30 | 29.00 | 30.58 | -1.58 | Before |
| REGRESSION.HCC1395_tumor.L004 | -75 | Cycle | Base Insertion | 26143 | 0.04 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -75 | Cycle | Base Deletion | 26143 | 1.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -76 | Cycle | Base Substitution | 26244 | 33.07 | 30.00 | 30.75 | -0.75 | Before |
| REGRESSION.HCC1395_tumor.L004 | -76 | Cycle | Base Insertion | 26105 | 0.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -76 | Cycle | Base Deletion | 26105 | 1.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -77 | Cycle | Base Substitution | 26019 | 37.03 | 29.00 | 30.63 | -1.63 | Before |
| REGRESSION.HCC1395_tumor.L004 | -77 | Cycle | Base Insertion | 25880 | 0.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -77 | Cycle | Base Deletion | 25880 | 1.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -78 | Cycle | Base Substitution | 26000 | 42.97 | 29.00 | 30.73 | -1.73 | Before |
| REGRESSION.HCC1395_tumor.L004 | -78 | Cycle | Base Insertion | 25855 | 0.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -78 | Cycle | Base Deletion | 25855 | 1.80 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -79 | Cycle | Base Substitution | 26052 | 35.67 | 30.00 | 30.48 | -0.48 | Before |
| REGRESSION.HCC1395_tumor.L004 | -79 | Cycle | Base Insertion | 25891 | 0.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -79 | Cycle | Base Deletion | 25891 | 1.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -8 | Cycle | Base Substitution | 27021 | 47.54 | 29.00 | 30.77 | -1.77 | Before |
| REGRESSION.HCC1395_tumor.L004 | -8 | Cycle | Base Insertion | 27021 | 0.69 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -8 | Cycle | Base Deletion | 27021 | 0.03 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -80 | Cycle | Base Substitution | 25978 | 37.23 | 29.00 | 30.46 | -1.46 | Before |
| REGRESSION.HCC1395_tumor.L004 | -80 | Cycle | Base Insertion | 25823 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -80 | Cycle | Base Deletion | 25823 | 1.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -81 | Cycle | Base Substitution | 26013 | 41.97 | 29.00 | 30.48 | -1.48 | Before |
| REGRESSION.HCC1395_tumor.L004 | -81 | Cycle | Base Insertion | 25845 | 0.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -81 | Cycle | Base Deletion | 25845 | 1.09 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -82 | Cycle | Base Substitution | 25852 | 45.83 | 29.00 | 30.24 | -1.24 | Before |
| REGRESSION.HCC1395_tumor.L004 | -82 | Cycle | Base Insertion | 25672 | 0.04 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -82 | Cycle | Base Deletion | 25672 | 1.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -83 | Cycle | Base Substitution | 25866 | 41.90 | 29.00 | 30.55 | -1.55 | Before |
| REGRESSION.HCC1395_tumor.L004 | -83 | Cycle | Base Insertion | 25698 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -83 | Cycle | Base Deletion | 25698 | 1.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -84 | Cycle | Base Substitution | 25826 | 47.25 | 29.00 | 30.84 | -1.84 | Before |
| REGRESSION.HCC1395_tumor.L004 | -84 | Cycle | Base Insertion | 25647 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -84 | Cycle | Base Deletion | 25647 | 0.93 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -85 | Cycle | Base Substitution | 25827 | 36.15 | 30.00 | 30.77 | -0.77 | Before |
| REGRESSION.HCC1395_tumor.L004 | -85 | Cycle | Base Insertion | 25640 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -85 | Cycle | Base Deletion | 25640 | 1.02 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -86 | Cycle | Base Substitution | 25792 | 46.93 | 29.00 | 30.03 | -1.03 | Before |
| REGRESSION.HCC1395_tumor.L004 | -86 | Cycle | Base Insertion | 25603 | 0.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -86 | Cycle | Base Deletion | 25603 | 1.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -87 | Cycle | Base Substitution | 25685 | 36.64 | 29.00 | 30.35 | -1.35 | Before |
| REGRESSION.HCC1395_tumor.L004 | -87 | Cycle | Base Insertion | 25484 | 0.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -87 | Cycle | Base Deletion | 25484 | 1.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -88 | Cycle | Base Substitution | 25623 | 47.17 | 29.00 | 30.23 | -1.23 | Before |
| REGRESSION.HCC1395_tumor.L004 | -88 | Cycle | Base Insertion | 25420 | 0.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -88 | Cycle | Base Deletion | 25420 | 1.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -89 | Cycle | Base Substitution | 25628 | 47.20 | 29.00 | 30.44 | -1.44 | Before |
| REGRESSION.HCC1395_tumor.L004 | -89 | Cycle | Base Insertion | 25421 | 0.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -89 | Cycle | Base Deletion | 25421 | 1.67 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -9 | Cycle | Base Substitution | 27118 | 41.16 | 30.00 | 31.17 | -1.17 | Before |
| REGRESSION.HCC1395_tumor.L004 | -9 | Cycle | Base Insertion | 27118 | 0.61 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -9 | Cycle | Base Deletion | 27118 | 0.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -90 | Cycle | Base Substitution | 25533 | 39.37 | 29.00 | 30.40 | -1.40 | Before |
| REGRESSION.HCC1395_tumor.L004 | -90 | Cycle | Base Insertion | 25317 | 0.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -90 | Cycle | Base Deletion | 25317 | 1.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -91 | Cycle | Base Substitution | 25494 | 30.44 | 30.00 | 30.82 | -0.82 | Before |
| REGRESSION.HCC1395_tumor.L004 | -91 | Cycle | Base Insertion | 25295 | 0.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -91 | Cycle | Base Deletion | 25295 | 1.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -92 | Cycle | Base Substitution | 25351 | 53.31 | 29.00 | 30.62 | -1.62 | Before |
| REGRESSION.HCC1395_tumor.L004 | -92 | Cycle | Base Insertion | 25164 | 0.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -92 | Cycle | Base Deletion | 25164 | 1.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -93 | Cycle | Base Substitution | 25385 | 44.15 | 29.00 | 30.08 | -1.08 | Before |
| REGRESSION.HCC1395_tumor.L004 | -93 | Cycle | Base Insertion | 25186 | 0.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -93 | Cycle | Base Deletion | 25186 | 1.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -94 | Cycle | Base Substitution | 25367 | 57.13 | 29.00 | 30.25 | -1.25 | Before |
| REGRESSION.HCC1395_tumor.L004 | -94 | Cycle | Base Insertion | 25179 | 0.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -94 | Cycle | Base Deletion | 25179 | 1.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -95 | Cycle | Base Substitution | 25305 | 48.28 | 29.00 | 30.18 | -1.18 | Before |
| REGRESSION.HCC1395_tumor.L004 | -95 | Cycle | Base Insertion | 25082 | 0.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -95 | Cycle | Base Deletion | 25082 | 1.07 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -96 | Cycle | Base Substitution | 25268 | 42.69 | 29.00 | 30.56 | -1.56 | Before |
| REGRESSION.HCC1395_tumor.L004 | -96 | Cycle | Base Insertion | 25030 | 0.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -96 | Cycle | Base Deletion | 25030 | 0.85 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -97 | Cycle | Base Substitution | 25111 | 51.74 | 29.00 | 30.04 | -1.04 | Before |
| REGRESSION.HCC1395_tumor.L004 | -97 | Cycle | Base Insertion | 24878 | 0.87 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -97 | Cycle | Base Deletion | 24878 | 0.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -98 | Cycle | Base Substitution | 25020 | 53.55 | 29.00 | 30.12 | -1.12 | Before |
| REGRESSION.HCC1395_tumor.L004 | -98 | Cycle | Base Insertion | 24776 | 0.81 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -98 | Cycle | Base Deletion | 24776 | 0.66 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -99 | Cycle | Base Substitution | 25122 | 42.90 | 29.00 | 30.15 | -1.15 | Before |
| REGRESSION.HCC1395_tumor.L004 | -99 | Cycle | Base Insertion | 24894 | 0.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | -99 | Cycle | Base Deletion | 24894 | 1.03 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 1 | Cycle | Base Substitution | 26730 | 51.51 | 28.00 | 28.80 | -0.80 | Before |
| REGRESSION.HCC1395_tumor.L004 | 10 | Cycle | Base Substitution | 26992 | 33.25 | 30.00 | 31.27 | -1.27 | Before |
| REGRESSION.HCC1395_tumor.L004 | 10 | Cycle | Base Insertion | 26992 | 1.60 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 10 | Cycle | Base Deletion | 26992 | 0.87 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 100 | Cycle | Base Substitution | 24974 | 37.53 | 29.00 | 30.67 | -1.67 | Before |
| REGRESSION.HCC1395_tumor.L004 | 100 | Cycle | Base Insertion | 24739 | 0.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 100 | Cycle | Base Deletion | 24739 | 1.62 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 101 | Cycle | Base Substitution | 24898 | 44.01 | 29.00 | 30.61 | -1.61 | Before |
| REGRESSION.HCC1395_tumor.L004 | 101 | Cycle | Base Insertion | 24646 | 0.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 101 | Cycle | Base Deletion | 24646 | 1.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 102 | Cycle | Base Substitution | 24710 | 38.23 | 29.00 | 30.51 | -1.51 | Before |
| REGRESSION.HCC1395_tumor.L004 | 102 | Cycle | Base Insertion | 24436 | 0.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 102 | Cycle | Base Deletion | 24436 | 0.93 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 103 | Cycle | Base Substitution | 24715 | 32.92 | 30.00 | 30.58 | -0.58 | Before |
| REGRESSION.HCC1395_tumor.L004 | 103 | Cycle | Base Insertion | 24427 | 1.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 103 | Cycle | Base Deletion | 24427 | 0.92 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 104 | Cycle | Base Substitution | 24710 | 38.30 | 29.00 | 30.65 | -1.65 | Before |
| REGRESSION.HCC1395_tumor.L004 | 104 | Cycle | Base Insertion | 24434 | 0.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 104 | Cycle | Base Deletion | 24434 | 1.02 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 105 | Cycle | Base Substitution | 24513 | 43.30 | 29.00 | 30.51 | -1.51 | Before |
| REGRESSION.HCC1395_tumor.L004 | 105 | Cycle | Base Insertion | 24249 | 0.52 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 105 | Cycle | Base Deletion | 24249 | 1.09 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 106 | Cycle | Base Substitution | 24516 | 48.92 | 29.00 | 30.48 | -1.48 | Before |
| REGRESSION.HCC1395_tumor.L004 | 106 | Cycle | Base Insertion | 24265 | 0.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 106 | Cycle | Base Deletion | 24265 | 1.09 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 107 | Cycle | Base Substitution | 24494 | 53.21 | 29.00 | 30.36 | -1.36 | Before |
| REGRESSION.HCC1395_tumor.L004 | 107 | Cycle | Base Insertion | 24233 | 0.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 107 | Cycle | Base Deletion | 24233 | 1.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 108 | Cycle | Base Substitution | 24301 | 56.43 | 29.00 | 30.49 | -1.49 | Before |
| REGRESSION.HCC1395_tumor.L004 | 108 | Cycle | Base Insertion | 24040 | 0.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 108 | Cycle | Base Deletion | 24040 | 1.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 109 | Cycle | Base Substitution | 24370 | 33.40 | 30.00 | 30.45 | -0.45 | Before |
| REGRESSION.HCC1395_tumor.L004 | 109 | Cycle | Base Insertion | 24110 | 0.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 109 | Cycle | Base Deletion | 24110 | 1.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 11 | Cycle | Base Substitution | 27066 | 33.82 | 30.00 | 31.36 | -1.36 | Before |
| REGRESSION.HCC1395_tumor.L004 | 11 | Cycle | Base Insertion | 27066 | 0.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 11 | Cycle | Base Deletion | 27066 | 1.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 110 | Cycle | Base Substitution | 24285 | 41.99 | 29.00 | 30.20 | -1.20 | Before |
| REGRESSION.HCC1395_tumor.L004 | 110 | Cycle | Base Insertion | 23990 | 0.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 110 | Cycle | Base Deletion | 23990 | 1.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 111 | Cycle | Base Substitution | 24170 | 45.14 | 29.00 | 30.23 | -1.23 | Before |
| REGRESSION.HCC1395_tumor.L004 | 111 | Cycle | Base Insertion | 23882 | 0.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 111 | Cycle | Base Deletion | 23882 | 1.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 112 | Cycle | Base Substitution | 24047 | 33.31 | 30.00 | 30.42 | -0.42 | Before |
| REGRESSION.HCC1395_tumor.L004 | 112 | Cycle | Base Insertion | 23770 | 0.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 112 | Cycle | Base Deletion | 23770 | 1.61 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 113 | Cycle | Base Substitution | 24107 | 37.90 | 29.00 | 30.51 | -1.51 | Before |
| REGRESSION.HCC1395_tumor.L004 | 113 | Cycle | Base Insertion | 23805 | 0.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 113 | Cycle | Base Deletion | 23805 | 1.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 114 | Cycle | Base Substitution | 24076 | 36.85 | 29.00 | 30.33 | -1.33 | Before |
| REGRESSION.HCC1395_tumor.L004 | 114 | Cycle | Base Insertion | 23795 | 0.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 114 | Cycle | Base Deletion | 23795 | 1.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 115 | Cycle | Base Substitution | 23970 | 43.17 | 29.00 | 30.33 | -1.33 | Before |
| REGRESSION.HCC1395_tumor.L004 | 115 | Cycle | Base Insertion | 23700 | 0.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 115 | Cycle | Base Deletion | 23700 | 1.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 116 | Cycle | Base Substitution | 23917 | 41.67 | 29.00 | 30.58 | -1.58 | Before |
| REGRESSION.HCC1395_tumor.L004 | 116 | Cycle | Base Insertion | 23654 | 0.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 116 | Cycle | Base Deletion | 23654 | 1.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 117 | Cycle | Base Substitution | 23802 | 49.92 | 29.00 | 30.13 | -1.13 | Before |
| REGRESSION.HCC1395_tumor.L004 | 117 | Cycle | Base Insertion | 23542 | 0.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 117 | Cycle | Base Deletion | 23542 | 1.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 118 | Cycle | Base Substitution | 23757 | 44.02 | 29.00 | 30.45 | -1.45 | Before |
| REGRESSION.HCC1395_tumor.L004 | 118 | Cycle | Base Insertion | 23502 | 0.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 118 | Cycle | Base Deletion | 23502 | 1.57 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 119 | Cycle | Base Substitution | 23670 | 54.35 | 29.00 | 30.14 | -1.14 | Before |
| REGRESSION.HCC1395_tumor.L004 | 119 | Cycle | Base Insertion | 23423 | 0.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 119 | Cycle | Base Deletion | 23423 | 1.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 12 | Cycle | Base Substitution | 26879 | 32.80 | 30.00 | 31.20 | -1.20 | Before |
| REGRESSION.HCC1395_tumor.L004 | 12 | Cycle | Base Insertion | 26879 | 0.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 12 | Cycle | Base Deletion | 26879 | 1.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 120 | Cycle | Base Substitution | 23696 | 37.25 | 29.00 | 30.43 | -1.43 | Before |
| REGRESSION.HCC1395_tumor.L004 | 120 | Cycle | Base Insertion | 23421 | 0.03 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 120 | Cycle | Base Deletion | 23421 | 1.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 121 | Cycle | Base Substitution | 23533 | 34.03 | 30.00 | 30.32 | -0.32 | Before |
| REGRESSION.HCC1395_tumor.L004 | 121 | Cycle | Base Insertion | 23242 | 0.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 121 | Cycle | Base Deletion | 23242 | 1.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 122 | Cycle | Base Substitution | 23418 | 51.17 | 29.00 | 30.40 | -1.40 | Before |
| REGRESSION.HCC1395_tumor.L004 | 122 | Cycle | Base Insertion | 23106 | 0.03 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 122 | Cycle | Base Deletion | 23106 | 1.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 123 | Cycle | Base Substitution | 23481 | 40.78 | 29.00 | 30.46 | -1.46 | Before |
| REGRESSION.HCC1395_tumor.L004 | 123 | Cycle | Base Insertion | 23162 | 0.03 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 123 | Cycle | Base Deletion | 23162 | 1.90 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 124 | Cycle | Base Substitution | 23463 | 49.57 | 28.00 | 29.78 | -1.78 | Before |
| REGRESSION.HCC1395_tumor.L004 | 124 | Cycle | Base Insertion | 23131 | 0.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 124 | Cycle | Base Deletion | 23131 | 1.66 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 125 | Cycle | Base Substitution | 23449 | 43.05 | 29.00 | 30.14 | -1.14 | Before |
| REGRESSION.HCC1395_tumor.L004 | 125 | Cycle | Base Insertion | 23125 | 0.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 125 | Cycle | Base Deletion | 23125 | 2.01 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 126 | Cycle | Base Substitution | 23308 | 52.29 | 29.00 | 30.31 | -1.31 | Before |
| REGRESSION.HCC1395_tumor.L004 | 126 | Cycle | Base Insertion | 22984 | 0.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 126 | Cycle | Base Deletion | 22984 | 1.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 127 | Cycle | Base Substitution | 23258 | 45.22 | 29.00 | 30.47 | -1.47 | Before |
| REGRESSION.HCC1395_tumor.L004 | 127 | Cycle | Base Insertion | 22953 | 1.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 127 | Cycle | Base Deletion | 22953 | 1.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 128 | Cycle | Base Substitution | 23230 | 38.52 | 29.00 | 30.24 | -1.24 | Before |
| REGRESSION.HCC1395_tumor.L004 | 128 | Cycle | Base Insertion | 22916 | 0.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 128 | Cycle | Base Deletion | 22916 | 1.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 129 | Cycle | Base Substitution | 23039 | 38.76 | 29.00 | 30.07 | -1.07 | Before |
| REGRESSION.HCC1395_tumor.L004 | 129 | Cycle | Base Insertion | 22725 | 0.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 129 | Cycle | Base Deletion | 22725 | 1.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 13 | Cycle | Base Substitution | 26945 | 35.90 | 30.00 | 31.51 | -1.51 | Before |
| REGRESSION.HCC1395_tumor.L004 | 13 | Cycle | Base Insertion | 26945 | 0.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 13 | Cycle | Base Deletion | 26945 | 1.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 130 | Cycle | Base Substitution | 23048 | 42.98 | 28.00 | 29.78 | -1.78 | Before |
| REGRESSION.HCC1395_tumor.L004 | 130 | Cycle | Base Insertion | 22730 | 0.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 130 | Cycle | Base Deletion | 22730 | 1.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 131 | Cycle | Base Substitution | 22818 | 45.05 | 29.00 | 30.11 | -1.11 | Before |
| REGRESSION.HCC1395_tumor.L004 | 131 | Cycle | Base Insertion | 22486 | 0.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 131 | Cycle | Base Deletion | 22486 | 1.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 132 | Cycle | Base Substitution | 22787 | 38.95 | 29.00 | 30.28 | -1.28 | Before |
| REGRESSION.HCC1395_tumor.L004 | 132 | Cycle | Base Insertion | 22451 | 0.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 132 | Cycle | Base Deletion | 22451 | 1.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 133 | Cycle | Base Substitution | 22748 | 41.79 | 29.00 | 30.19 | -1.19 | Before |
| REGRESSION.HCC1395_tumor.L004 | 133 | Cycle | Base Insertion | 22430 | 0.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 133 | Cycle | Base Deletion | 22430 | 1.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 134 | Cycle | Base Substitution | 22709 | 35.91 | 29.00 | 29.99 | -0.99 | Before |
| REGRESSION.HCC1395_tumor.L004 | 134 | Cycle | Base Insertion | 22373 | 0.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 134 | Cycle | Base Deletion | 22373 | 1.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 135 | Cycle | Base Substitution | 22579 | 49.56 | 28.00 | 29.99 | -1.99 | Before |
| REGRESSION.HCC1395_tumor.L004 | 135 | Cycle | Base Insertion | 22251 | 0.83 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 135 | Cycle | Base Deletion | 22251 | 1.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 136 | Cycle | Base Substitution | 22602 | 37.45 | 29.00 | 30.21 | -1.21 | Before |
| REGRESSION.HCC1395_tumor.L004 | 136 | Cycle | Base Insertion | 22268 | 1.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 136 | Cycle | Base Deletion | 22268 | 0.89 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 137 | Cycle | Base Substitution | 22543 | 40.14 | 29.00 | 30.58 | -1.58 | Before |
| REGRESSION.HCC1395_tumor.L004 | 137 | Cycle | Base Insertion | 22212 | 0.84 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 137 | Cycle | Base Deletion | 22212 | 1.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 138 | Cycle | Base Substitution | 22380 | 45.10 | 29.00 | 30.18 | -1.18 | Before |
| REGRESSION.HCC1395_tumor.L004 | 138 | Cycle | Base Insertion | 22065 | 0.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 138 | Cycle | Base Deletion | 22065 | 1.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 139 | Cycle | Base Substitution | 22396 | 51.41 | 29.00 | 30.19 | -1.19 | Before |
| REGRESSION.HCC1395_tumor.L004 | 139 | Cycle | Base Insertion | 22073 | 0.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 139 | Cycle | Base Deletion | 22073 | 1.09 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 14 | Cycle | Base Substitution | 26944 | 38.79 | 30.00 | 31.62 | -1.62 | Before |
| REGRESSION.HCC1395_tumor.L004 | 14 | Cycle | Base Insertion | 26944 | 0.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 14 | Cycle | Base Deletion | 26944 | 1.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 140 | Cycle | Base Substitution | 22300 | 47.85 | 29.00 | 30.05 | -1.05 | Before |
| REGRESSION.HCC1395_tumor.L004 | 140 | Cycle | Base Insertion | 21983 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 140 | Cycle | Base Deletion | 21983 | 0.93 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 141 | Cycle | Base Substitution | 22250 | 42.97 | 28.00 | 29.81 | -1.81 | Before |
| REGRESSION.HCC1395_tumor.L004 | 141 | Cycle | Base Insertion | 21920 | 0.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 141 | Cycle | Base Deletion | 21920 | 0.67 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 142 | Cycle | Base Substitution | 22101 | 40.93 | 28.00 | 29.98 | -1.98 | Before |
| REGRESSION.HCC1395_tumor.L004 | 142 | Cycle | Base Insertion | 21738 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 142 | Cycle | Base Deletion | 21738 | 0.98 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 143 | Cycle | Base Substitution | 22038 | 40.41 | 28.00 | 29.82 | -1.82 | Before |
| REGRESSION.HCC1395_tumor.L004 | 143 | Cycle | Base Insertion | 21706 | 0.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 143 | Cycle | Base Deletion | 21706 | 0.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 144 | Cycle | Base Substitution | 22006 | 30.07 | 30.00 | 30.18 | -0.18 | Before |
| REGRESSION.HCC1395_tumor.L004 | 144 | Cycle | Base Insertion | 21678 | 0.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 144 | Cycle | Base Deletion | 21678 | 0.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 145 | Cycle | Base Substitution | 21884 | 37.28 | 29.00 | 29.68 | -0.68 | Before |
| REGRESSION.HCC1395_tumor.L004 | 145 | Cycle | Base Insertion | 21566 | 0.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 145 | Cycle | Base Deletion | 21566 | 0.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 146 | Cycle | Base Substitution | 21806 | 36.85 | 29.00 | 29.88 | -0.88 | Before |
| REGRESSION.HCC1395_tumor.L004 | 146 | Cycle | Base Insertion | 21502 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 146 | Cycle | Base Deletion | 21502 | 0.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 147 | Cycle | Base Substitution | 21836 | 47.67 | 28.00 | 29.91 | -1.91 | Before |
| REGRESSION.HCC1395_tumor.L004 | 148 | Cycle | Base Substitution | 21638 | 55.10 | 28.00 | 29.80 | -1.80 | Before |
| REGRESSION.HCC1395_tumor.L004 | 149 | Cycle | Base Substitution | 21624 | 47.61 | 28.00 | 29.82 | -1.82 | Before |
| REGRESSION.HCC1395_tumor.L004 | 15 | Cycle | Base Substitution | 26956 | 34.67 | 30.00 | 31.65 | -1.65 | Before |
| REGRESSION.HCC1395_tumor.L004 | 15 | Cycle | Base Insertion | 26956 | 0.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 15 | Cycle | Base Deletion | 26956 | 0.96 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 150 | Cycle | Base Substitution | 21516 | 43.41 | 28.00 | 29.48 | -1.48 | Before |
| REGRESSION.HCC1395_tumor.L004 | 16 | Cycle | Base Substitution | 27059 | 32.28 | 31.00 | 32.98 | -1.98 | Before |
| REGRESSION.HCC1395_tumor.L004 | 16 | Cycle | Base Insertion | 27059 | 0.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 16 | Cycle | Base Deletion | 27059 | 1.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 17 | Cycle | Base Substitution | 26968 | 21.58 | 32.00 | 32.71 | -0.71 | Before |
| REGRESSION.HCC1395_tumor.L004 | 17 | Cycle | Base Insertion | 26968 | 1.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 17 | Cycle | Base Deletion | 26968 | 1.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 18 | Cycle | Base Substitution | 26982 | 19.16 | 33.00 | 33.39 | -0.39 | Before |
| REGRESSION.HCC1395_tumor.L004 | 18 | Cycle | Base Insertion | 26982 | 0.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 18 | Cycle | Base Deletion | 26982 | 1.07 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 19 | Cycle | Base Substitution | 26901 | 18.26 | 33.00 | 33.01 | -0.01 | Before |
| REGRESSION.HCC1395_tumor.L004 | 19 | Cycle | Base Insertion | 26901 | 0.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 19 | Cycle | Base Deletion | 26901 | 1.12 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 2 | Cycle | Base Substitution | 27216 | 55.27 | 29.00 | 30.34 | -1.34 | Before |
| REGRESSION.HCC1395_tumor.L004 | 20 | Cycle | Base Substitution | 26913 | 23.24 | 32.00 | 33.20 | -1.20 | Before |
| REGRESSION.HCC1395_tumor.L004 | 20 | Cycle | Base Insertion | 26913 | 0.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 20 | Cycle | Base Deletion | 26913 | 1.61 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 21 | Cycle | Base Substitution | 26950 | 26.37 | 32.00 | 32.98 | -0.98 | Before |
| REGRESSION.HCC1395_tumor.L004 | 21 | Cycle | Base Insertion | 26950 | 0.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 21 | Cycle | Base Deletion | 26950 | 1.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 22 | Cycle | Base Substitution | 26908 | 20.71 | 33.00 | 33.48 | -0.48 | Before |
| REGRESSION.HCC1395_tumor.L004 | 22 | Cycle | Base Insertion | 26908 | 0.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 22 | Cycle | Base Deletion | 26908 | 1.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 23 | Cycle | Base Substitution | 26901 | 22.85 | 32.00 | 33.19 | -1.19 | Before |
| REGRESSION.HCC1395_tumor.L004 | 23 | Cycle | Base Insertion | 26901 | 0.81 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 23 | Cycle | Base Deletion | 26901 | 1.99 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 24 | Cycle | Base Substitution | 26886 | 25.62 | 32.00 | 33.36 | -1.36 | Before |
| REGRESSION.HCC1395_tumor.L004 | 24 | Cycle | Base Insertion | 26886 | 1.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 24 | Cycle | Base Deletion | 26886 | 1.66 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 25 | Cycle | Base Substitution | 26824 | 23.11 | 32.00 | 33.28 | -1.28 | Before |
| REGRESSION.HCC1395_tumor.L004 | 25 | Cycle | Base Insertion | 26824 | 0.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 25 | Cycle | Base Deletion | 26824 | 1.74 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 26 | Cycle | Base Substitution | 26941 | 32.54 | 30.00 | 31.48 | -1.48 | Before |
| REGRESSION.HCC1395_tumor.L004 | 26 | Cycle | Base Insertion | 26940 | 0.87 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 26 | Cycle | Base Deletion | 26940 | 1.89 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 27 | Cycle | Base Substitution | 26846 | 35.13 | 30.00 | 31.10 | -1.10 | Before |
| REGRESSION.HCC1395_tumor.L004 | 27 | Cycle | Base Insertion | 26845 | 0.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 27 | Cycle | Base Deletion | 26845 | 1.62 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 28 | Cycle | Base Substitution | 26790 | 29.51 | 31.00 | 31.58 | -0.58 | Before |
| REGRESSION.HCC1395_tumor.L004 | 28 | Cycle | Base Insertion | 26789 | 1.01 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 28 | Cycle | Base Deletion | 26789 | 1.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 29 | Cycle | Base Substitution | 26844 | 27.09 | 31.00 | 31.67 | -0.67 | Before |
| REGRESSION.HCC1395_tumor.L004 | 29 | Cycle | Base Insertion | 26844 | 0.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 29 | Cycle | Base Deletion | 26844 | 1.52 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 3 | Cycle | Base Substitution | 27132 | 57.14 | 29.00 | 30.83 | -1.83 | Before |
| REGRESSION.HCC1395_tumor.L004 | 30 | Cycle | Base Substitution | 26703 | 33.19 | 30.00 | 31.84 | -1.84 | Before |
| REGRESSION.HCC1395_tumor.L004 | 30 | Cycle | Base Insertion | 26702 | 0.95 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 30 | Cycle | Base Deletion | 26702 | 2.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 31 | Cycle | Base Substitution | 26793 | 27.99 | 31.00 | 31.91 | -0.91 | Before |
| REGRESSION.HCC1395_tumor.L004 | 31 | Cycle | Base Insertion | 26792 | 0.78 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 31 | Cycle | Base Deletion | 26792 | 2.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 32 | Cycle | Base Substitution | 26836 | 41.05 | 30.00 | 31.54 | -1.54 | Before |
| REGRESSION.HCC1395_tumor.L004 | 32 | Cycle | Base Insertion | 26835 | 0.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 32 | Cycle | Base Deletion | 26835 | 1.85 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 33 | Cycle | Base Substitution | 26749 | 25.45 | 31.00 | 31.64 | -0.64 | Before |
| REGRESSION.HCC1395_tumor.L004 | 33 | Cycle | Base Insertion | 26749 | 0.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 33 | Cycle | Base Deletion | 26749 | 1.74 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 34 | Cycle | Base Substitution | 26719 | 27.74 | 31.00 | 31.76 | -0.76 | Before |
| REGRESSION.HCC1395_tumor.L004 | 34 | Cycle | Base Insertion | 26719 | 0.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 34 | Cycle | Base Deletion | 26719 | 1.77 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 35 | Cycle | Base Substitution | 26614 | 32.32 | 30.00 | 31.48 | -1.48 | Before |
| REGRESSION.HCC1395_tumor.L004 | 35 | Cycle | Base Insertion | 26614 | 0.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 35 | Cycle | Base Deletion | 26614 | 1.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 36 | Cycle | Base Substitution | 26745 | 30.75 | 31.00 | 32.16 | -1.16 | Before |
| REGRESSION.HCC1395_tumor.L004 | 36 | Cycle | Base Insertion | 26745 | 0.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 36 | Cycle | Base Deletion | 26745 | 1.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 37 | Cycle | Base Substitution | 26770 | 34.84 | 30.00 | 31.61 | -1.61 | Before |
| REGRESSION.HCC1395_tumor.L004 | 37 | Cycle | Base Insertion | 26768 | 0.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 37 | Cycle | Base Deletion | 26768 | 1.73 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 38 | Cycle | Base Substitution | 26771 | 35.42 | 30.00 | 31.76 | -1.76 | Before |
| REGRESSION.HCC1395_tumor.L004 | 38 | Cycle | Base Insertion | 26770 | 0.12 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 38 | Cycle | Base Deletion | 26770 | 1.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 39 | Cycle | Base Substitution | 26702 | 33.54 | 30.00 | 31.44 | -1.44 | Before |
| REGRESSION.HCC1395_tumor.L004 | 39 | Cycle | Base Insertion | 26700 | 0.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 39 | Cycle | Base Deletion | 26700 | 1.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 4 | Cycle | Base Substitution | 26985 | 55.17 | 30.00 | 31.36 | -1.36 | Before |
| REGRESSION.HCC1395_tumor.L004 | 40 | Cycle | Base Substitution | 26657 | 35.01 | 30.00 | 31.62 | -1.62 | Before |
| REGRESSION.HCC1395_tumor.L004 | 40 | Cycle | Base Insertion | 26654 | 0.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 40 | Cycle | Base Deletion | 26654 | 1.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 41 | Cycle | Base Substitution | 26691 | 35.32 | 30.00 | 31.48 | -1.48 | Before |
| REGRESSION.HCC1395_tumor.L004 | 41 | Cycle | Base Insertion | 26688 | 0.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 41 | Cycle | Base Deletion | 26688 | 3.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 42 | Cycle | Base Substitution | 26609 | 21.43 | 32.00 | 32.03 | -0.03 | Before |
| REGRESSION.HCC1395_tumor.L004 | 42 | Cycle | Base Insertion | 26605 | 0.78 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 42 | Cycle | Base Deletion | 26605 | 1.62 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 43 | Cycle | Base Substitution | 26702 | 43.26 | 30.00 | 31.74 | -1.74 | Before |
| REGRESSION.HCC1395_tumor.L004 | 43 | Cycle | Base Insertion | 26700 | 0.62 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 43 | Cycle | Base Deletion | 26700 | 1.92 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 44 | Cycle | Base Substitution | 26703 | 24.54 | 31.00 | 31.68 | -0.68 | Before |
| REGRESSION.HCC1395_tumor.L004 | 44 | Cycle | Base Insertion | 26701 | 0.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 44 | Cycle | Base Deletion | 26701 | 1.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 45 | Cycle | Base Substitution | 26521 | 43.15 | 30.00 | 31.49 | -1.49 | Before |
| REGRESSION.HCC1395_tumor.L004 | 45 | Cycle | Base Insertion | 26518 | 0.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 45 | Cycle | Base Deletion | 26518 | 1.74 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 46 | Cycle | Base Substitution | 26695 | 29.80 | 31.00 | 31.55 | -0.55 | Before |
| REGRESSION.HCC1395_tumor.L004 | 46 | Cycle | Base Insertion | 26692 | 0.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 46 | Cycle | Base Deletion | 26692 | 1.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 47 | Cycle | Base Substitution | 26561 | 27.97 | 31.00 | 31.80 | -0.80 | Before |
| REGRESSION.HCC1395_tumor.L004 | 47 | Cycle | Base Insertion | 26556 | 0.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 47 | Cycle | Base Deletion | 26556 | 1.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 48 | Cycle | Base Substitution | 26499 | 29.75 | 31.00 | 31.98 | -0.98 | Before |
| REGRESSION.HCC1395_tumor.L004 | 48 | Cycle | Base Insertion | 26493 | 0.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 48 | Cycle | Base Deletion | 26493 | 1.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 49 | Cycle | Base Substitution | 26592 | 31.04 | 31.00 | 31.47 | -0.47 | Before |
| REGRESSION.HCC1395_tumor.L004 | 49 | Cycle | Base Insertion | 26585 | 0.12 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 49 | Cycle | Base Deletion | 26585 | 1.91 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 5 | Cycle | Base Substitution | 27104 | 44.92 | 30.00 | 31.18 | -1.18 | Before |
| REGRESSION.HCC1395_tumor.L004 | 5 | Cycle | Base Insertion | 27104 | 0.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 5 | Cycle | Base Deletion | 27104 | 0.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 50 | Cycle | Base Substitution | 26603 | 40.93 | 29.00 | 30.91 | -1.91 | Before |
| REGRESSION.HCC1395_tumor.L004 | 50 | Cycle | Base Insertion | 26595 | 0.21 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 50 | Cycle | Base Deletion | 26595 | 1.88 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 51 | Cycle | Base Substitution | 26609 | 38.69 | 30.00 | 31.44 | -1.44 | Before |
| REGRESSION.HCC1395_tumor.L004 | 51 | Cycle | Base Insertion | 26600 | 0.21 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 51 | Cycle | Base Deletion | 26600 | 1.76 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 52 | Cycle | Base Substitution | 26556 | 33.36 | 30.00 | 31.66 | -1.66 | Before |
| REGRESSION.HCC1395_tumor.L004 | 52 | Cycle | Base Insertion | 26542 | 0.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 52 | Cycle | Base Deletion | 26542 | 1.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 53 | Cycle | Base Substitution | 26577 | 36.63 | 30.00 | 31.48 | -1.48 | Before |
| REGRESSION.HCC1395_tumor.L004 | 53 | Cycle | Base Insertion | 26559 | 0.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 53 | Cycle | Base Deletion | 26559 | 1.66 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 54 | Cycle | Base Substitution | 26421 | 25.95 | 31.00 | 31.44 | -0.44 | Before |
| REGRESSION.HCC1395_tumor.L004 | 54 | Cycle | Base Insertion | 26403 | 0.96 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 54 | Cycle | Base Deletion | 26403 | 1.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 55 | Cycle | Base Substitution | 26515 | 38.85 | 30.00 | 31.48 | -1.48 | Before |
| REGRESSION.HCC1395_tumor.L004 | 55 | Cycle | Base Insertion | 26485 | 1.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 55 | Cycle | Base Deletion | 26485 | 1.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 56 | Cycle | Base Substitution | 26516 | 34.31 | 30.00 | 31.69 | -1.69 | Before |
| REGRESSION.HCC1395_tumor.L004 | 56 | Cycle | Base Insertion | 26472 | 0.79 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 56 | Cycle | Base Deletion | 26472 | 1.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 57 | Cycle | Base Substitution | 26482 | 46.96 | 30.00 | 31.45 | -1.45 | Before |
| REGRESSION.HCC1395_tumor.L004 | 57 | Cycle | Base Insertion | 26439 | 1.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 57 | Cycle | Base Deletion | 26439 | 1.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 58 | Cycle | Base Substitution | 26452 | 32.40 | 30.00 | 31.46 | -1.46 | Before |
| REGRESSION.HCC1395_tumor.L004 | 58 | Cycle | Base Insertion | 26404 | 0.89 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 58 | Cycle | Base Deletion | 26404 | 1.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 59 | Cycle | Base Substitution | 26440 | 33.14 | 30.00 | 31.73 | -1.73 | Before |
| REGRESSION.HCC1395_tumor.L004 | 59 | Cycle | Base Insertion | 26389 | 0.60 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 59 | Cycle | Base Deletion | 26389 | 1.74 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 6 | Cycle | Base Substitution | 26928 | 37.62 | 30.00 | 31.04 | -1.04 | Before |
| REGRESSION.HCC1395_tumor.L004 | 6 | Cycle | Base Insertion | 26928 | 0.66 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 6 | Cycle | Base Deletion | 26928 | 0.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 60 | Cycle | Base Substitution | 26416 | 37.58 | 30.00 | 31.39 | -1.39 | Before |
| REGRESSION.HCC1395_tumor.L004 | 60 | Cycle | Base Insertion | 26363 | 0.82 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 60 | Cycle | Base Deletion | 26363 | 1.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 61 | Cycle | Base Substitution | 26353 | 29.88 | 31.00 | 31.42 | -0.42 | Before |
| REGRESSION.HCC1395_tumor.L004 | 61 | Cycle | Base Insertion | 26302 | 0.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 61 | Cycle | Base Deletion | 26302 | 1.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 62 | Cycle | Base Substitution | 26363 | 40.22 | 30.00 | 31.63 | -1.63 | Before |
| REGRESSION.HCC1395_tumor.L004 | 62 | Cycle | Base Insertion | 26306 | 0.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 62 | Cycle | Base Deletion | 26306 | 1.52 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 63 | Cycle | Base Substitution | 26286 | 35.92 | 30.00 | 31.25 | -1.25 | Before |
| REGRESSION.HCC1395_tumor.L004 | 63 | Cycle | Base Insertion | 26230 | 0.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 63 | Cycle | Base Deletion | 26230 | 1.09 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 64 | Cycle | Base Substitution | 26322 | 35.30 | 30.00 | 31.32 | -1.32 | Before |
| REGRESSION.HCC1395_tumor.L004 | 64 | Cycle | Base Insertion | 26261 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 64 | Cycle | Base Deletion | 26261 | 1.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 65 | Cycle | Base Substitution | 26315 | 50.66 | 30.00 | 31.17 | -1.17 | Before |
| REGRESSION.HCC1395_tumor.L004 | 65 | Cycle | Base Insertion | 26247 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 65 | Cycle | Base Deletion | 26247 | 1.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 66 | Cycle | Base Substitution | 26225 | 26.98 | 31.00 | 31.51 | -0.51 | Before |
| REGRESSION.HCC1395_tumor.L004 | 66 | Cycle | Base Insertion | 26141 | 0.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 66 | Cycle | Base Deletion | 26141 | 1.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 67 | Cycle | Base Substitution | 26320 | 39.80 | 29.00 | 30.84 | -1.84 | Before |
| REGRESSION.HCC1395_tumor.L004 | 67 | Cycle | Base Insertion | 26224 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 67 | Cycle | Base Deletion | 26224 | 1.02 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 68 | Cycle | Base Substitution | 26363 | 31.56 | 30.00 | 31.43 | -1.43 | Before |
| REGRESSION.HCC1395_tumor.L004 | 68 | Cycle | Base Insertion | 26264 | 0.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 68 | Cycle | Base Deletion | 26264 | 1.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 69 | Cycle | Base Substitution | 26291 | 34.35 | 30.00 | 31.37 | -1.37 | Before |
| REGRESSION.HCC1395_tumor.L004 | 69 | Cycle | Base Insertion | 26192 | 0.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 69 | Cycle | Base Deletion | 26192 | 1.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 7 | Cycle | Base Substitution | 26983 | 30.28 | 31.00 | 31.81 | -0.81 | Before |
| REGRESSION.HCC1395_tumor.L004 | 7 | Cycle | Base Insertion | 26983 | 0.66 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 7 | Cycle | Base Deletion | 26983 | 0.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 70 | Cycle | Base Substitution | 26253 | 28.02 | 31.00 | 31.54 | -0.54 | Before |
| REGRESSION.HCC1395_tumor.L004 | 70 | Cycle | Base Insertion | 26159 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 70 | Cycle | Base Deletion | 26159 | 1.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 71 | Cycle | Base Substitution | 26241 | 25.54 | 31.00 | 31.33 | -0.33 | Before |
| REGRESSION.HCC1395_tumor.L004 | 71 | Cycle | Base Insertion | 26148 | 0.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 71 | Cycle | Base Deletion | 26148 | 1.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 72 | Cycle | Base Substitution | 26108 | 36.24 | 30.00 | 31.07 | -1.07 | Before |
| REGRESSION.HCC1395_tumor.L004 | 72 | Cycle | Base Insertion | 26006 | 0.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 72 | Cycle | Base Deletion | 26006 | 1.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 73 | Cycle | Base Substitution | 26171 | 45.94 | 30.00 | 31.13 | -1.13 | Before |
| REGRESSION.HCC1395_tumor.L004 | 73 | Cycle | Base Insertion | 26052 | 0.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 73 | Cycle | Base Deletion | 26052 | 1.66 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 74 | Cycle | Base Substitution | 26072 | 27.99 | 31.00 | 31.48 | -0.48 | Before |
| REGRESSION.HCC1395_tumor.L004 | 74 | Cycle | Base Insertion | 25938 | 0.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 74 | Cycle | Base Deletion | 25938 | 1.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 75 | Cycle | Base Substitution | 26013 | 29.23 | 31.00 | 31.16 | -0.16 | Before |
| REGRESSION.HCC1395_tumor.L004 | 75 | Cycle | Base Insertion | 25874 | 0.76 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 75 | Cycle | Base Deletion | 25874 | 1.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 76 | Cycle | Base Substitution | 26086 | 29.42 | 31.00 | 31.18 | -0.18 | Before |
| REGRESSION.HCC1395_tumor.L004 | 76 | Cycle | Base Insertion | 25955 | 0.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 76 | Cycle | Base Deletion | 25955 | 1.65 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 77 | Cycle | Base Substitution | 26121 | 44.05 | 30.00 | 31.08 | -1.08 | Before |
| REGRESSION.HCC1395_tumor.L004 | 77 | Cycle | Base Insertion | 25992 | 0.75 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 77 | Cycle | Base Deletion | 25992 | 1.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 78 | Cycle | Base Substitution | 25950 | 32.88 | 30.00 | 31.21 | -1.21 | Before |
| REGRESSION.HCC1395_tumor.L004 | 78 | Cycle | Base Insertion | 25816 | 0.76 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 78 | Cycle | Base Deletion | 25816 | 1.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 79 | Cycle | Base Substitution | 25988 | 33.80 | 30.00 | 31.14 | -1.14 | Before |
| REGRESSION.HCC1395_tumor.L004 | 79 | Cycle | Base Insertion | 25828 | 0.88 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 79 | Cycle | Base Deletion | 25828 | 1.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 8 | Cycle | Base Substitution | 26952 | 24.00 | 31.00 | 31.40 | -0.40 | Before |
| REGRESSION.HCC1395_tumor.L004 | 8 | Cycle | Base Insertion | 26952 | 1.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 8 | Cycle | Base Deletion | 26952 | 0.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 80 | Cycle | Base Substitution | 25868 | 39.32 | 30.00 | 31.06 | -1.06 | Before |
| REGRESSION.HCC1395_tumor.L004 | 80 | Cycle | Base Insertion | 25701 | 0.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 80 | Cycle | Base Deletion | 25701 | 0.83 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 81 | Cycle | Base Substitution | 25778 | 48.10 | 30.00 | 31.03 | -1.03 | Before |
| REGRESSION.HCC1395_tumor.L004 | 81 | Cycle | Base Insertion | 25611 | 0.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 81 | Cycle | Base Deletion | 25611 | 0.79 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 82 | Cycle | Base Substitution | 25764 | 35.02 | 30.00 | 30.86 | -0.86 | Before |
| REGRESSION.HCC1395_tumor.L004 | 82 | Cycle | Base Insertion | 25593 | 0.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 82 | Cycle | Base Deletion | 25593 | 0.96 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 83 | Cycle | Base Substitution | 25748 | 46.94 | 29.00 | 30.87 | -1.87 | Before |
| REGRESSION.HCC1395_tumor.L004 | 83 | Cycle | Base Insertion | 25586 | 0.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 83 | Cycle | Base Deletion | 25586 | 1.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 84 | Cycle | Base Substitution | 25703 | 46.70 | 30.00 | 31.12 | -1.12 | Before |
| REGRESSION.HCC1395_tumor.L004 | 84 | Cycle | Base Insertion | 25527 | 0.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 84 | Cycle | Base Deletion | 25527 | 1.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 85 | Cycle | Base Substitution | 25650 | 41.06 | 29.00 | 30.82 | -1.82 | Before |
| REGRESSION.HCC1395_tumor.L004 | 85 | Cycle | Base Insertion | 25467 | 0.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 85 | Cycle | Base Deletion | 25467 | 1.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 86 | Cycle | Base Substitution | 25502 | 46.96 | 29.00 | 30.82 | -1.82 | Before |
| REGRESSION.HCC1395_tumor.L004 | 86 | Cycle | Base Insertion | 25314 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 86 | Cycle | Base Deletion | 25314 | 1.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 87 | Cycle | Base Substitution | 25614 | 37.30 | 30.00 | 31.30 | -1.30 | Before |
| REGRESSION.HCC1395_tumor.L004 | 87 | Cycle | Base Insertion | 25412 | 1.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 87 | Cycle | Base Deletion | 25412 | 1.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 88 | Cycle | Base Substitution | 25499 | 35.67 | 30.00 | 31.12 | -1.12 | Before |
| REGRESSION.HCC1395_tumor.L004 | 88 | Cycle | Base Insertion | 25302 | 0.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 88 | Cycle | Base Deletion | 25302 | 1.57 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 89 | Cycle | Base Substitution | 25298 | 37.99 | 29.00 | 30.95 | -1.95 | Before |
| REGRESSION.HCC1395_tumor.L004 | 89 | Cycle | Base Insertion | 25093 | 0.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 89 | Cycle | Base Deletion | 25093 | 0.92 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 9 | Cycle | Base Substitution | 27083 | 38.92 | 30.00 | 31.13 | -1.13 | Before |
| REGRESSION.HCC1395_tumor.L004 | 9 | Cycle | Base Insertion | 27083 | 1.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 9 | Cycle | Base Deletion | 27083 | 0.73 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 90 | Cycle | Base Substitution | 25352 | 39.04 | 29.00 | 30.55 | -1.55 | Before |
| REGRESSION.HCC1395_tumor.L004 | 90 | Cycle | Base Insertion | 25137 | 0.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 90 | Cycle | Base Deletion | 25137 | 1.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 91 | Cycle | Base Substitution | 25351 | 43.08 | 30.00 | 31.05 | -1.05 | Before |
| REGRESSION.HCC1395_tumor.L004 | 91 | Cycle | Base Insertion | 25156 | 0.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 91 | Cycle | Base Deletion | 25156 | 1.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 92 | Cycle | Base Substitution | 25349 | 42.17 | 29.00 | 30.92 | -1.92 | Before |
| REGRESSION.HCC1395_tumor.L004 | 92 | Cycle | Base Insertion | 25149 | 0.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 92 | Cycle | Base Deletion | 25149 | 1.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 93 | Cycle | Base Substitution | 25236 | 31.24 | 30.00 | 30.86 | -0.86 | Before |
| REGRESSION.HCC1395_tumor.L004 | 93 | Cycle | Base Insertion | 25032 | 0.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 93 | Cycle | Base Deletion | 25032 | 1.57 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 94 | Cycle | Base Substitution | 25310 | 42.32 | 30.00 | 31.03 | -1.03 | Before |
| REGRESSION.HCC1395_tumor.L004 | 94 | Cycle | Base Insertion | 25124 | 0.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 94 | Cycle | Base Deletion | 25124 | 2.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 95 | Cycle | Base Substitution | 25157 | 42.82 | 29.00 | 30.40 | -1.40 | Before |
| REGRESSION.HCC1395_tumor.L004 | 95 | Cycle | Base Insertion | 24942 | 0.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 95 | Cycle | Base Deletion | 24942 | 1.97 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 96 | Cycle | Base Substitution | 25098 | 38.71 | 29.00 | 30.42 | -1.42 | Before |
| REGRESSION.HCC1395_tumor.L004 | 96 | Cycle | Base Insertion | 24876 | 0.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 96 | Cycle | Base Deletion | 24876 | 1.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 97 | Cycle | Base Substitution | 25039 | 36.35 | 29.00 | 30.86 | -1.86 | Before |
| REGRESSION.HCC1395_tumor.L004 | 97 | Cycle | Base Insertion | 24801 | 0.80 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 97 | Cycle | Base Deletion | 24801 | 1.57 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 98 | Cycle | Base Substitution | 25044 | 32.51 | 30.00 | 30.74 | -0.74 | Before |
| REGRESSION.HCC1395_tumor.L004 | 98 | Cycle | Base Insertion | 24800 | 0.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 98 | Cycle | Base Deletion | 24800 | 2.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 99 | Cycle | Base Substitution | 24954 | 42.45 | 29.00 | 30.85 | -1.85 | Before |
| REGRESSION.HCC1395_tumor.L004 | 99 | Cycle | Base Insertion | 24723 | 0.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 99 | Cycle | Base Deletion | 24723 | 1.89 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 12 | QualityScore | Base Substitution | 79033 | 7626.42 | 10.00 | 12.00 | -2.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 24 | QualityScore | Base Substitution | 193592 | 703.68 | 24.00 | 24.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 40 | QualityScore | Base Substitution | 7314736 | 5604.87 | 31.00 | 40.00 | -9.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 45 | QualityScore | Base Insertion | 7587361 | 136.79 | 47.00 | 45.00 | 2.00 | Before |
| REGRESSION.HCC1395_tumor.L004 | 45 | QualityScore | Base Deletion | 7587361 | 376.20 | 43.00 | 45.00 | -2.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | AA | Context | Base Substitution | 523431 | 1295.25 | 26.00 | 29.63 | -3.63 | Before |
| REGRESSION.HCC1395_tumor.L005 | AAA | Context | Base Insertion | 176821 | 21.06 | 44.00 | 45.00 | -1.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | AAA | Context | Base Deletion | 176821 | 67.85 | 42.00 | 45.00 | -3.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | AAC | Context | Base Insertion | 86095 | 0.87 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | AAC | Context | Base Deletion | 86095 | 1.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | AAG | Context | Base Insertion | 135153 | 1.92 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | AAG | Context | Base Deletion | 135153 | 5.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | AAT | Context | Base Insertion | 100924 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | AAT | Context | Base Deletion | 100924 | 1.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | AC | Context | Base Substitution | 358789 | 1111.58 | 25.00 | 28.63 | -3.63 | Before |
| REGRESSION.HCC1395_tumor.L005 | ACA | Context | Base Insertion | 132577 | 4.97 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | ACA | Context | Base Deletion | 132577 | 9.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | ACC | Context | Base Insertion | 105249 | 3.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | ACC | Context | Base Deletion | 105249 | 2.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | ACG | Context | Base Insertion | 20865 | 0.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | ACG | Context | Base Deletion | 20865 | 2.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | ACT | Context | Base Insertion | 105603 | 0.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | ACT | Context | Base Deletion | 105603 | 3.95 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | AG | Context | Base Substitution | 565011 | 550.01 | 30.00 | 31.91 | -1.91 | Before |
| REGRESSION.HCC1395_tumor.L005 | AGA | Context | Base Insertion | 152604 | 2.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | AGA | Context | Base Deletion | 152604 | 5.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | AGC | Context | Base Insertion | 141004 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | AGC | Context | Base Deletion | 141004 | 4.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | AGG | Context | Base Insertion | 165322 | 6.83 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | AGG | Context | Base Deletion | 165322 | 4.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | AGT | Context | Base Insertion | 102967 | 0.12 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | AGT | Context | Base Deletion | 102967 | 3.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | AT | Context | Base Substitution | 369520 | 501.69 | 29.00 | 32.13 | -3.13 | Before |
| REGRESSION.HCC1395_tumor.L005 | ATA | Context | Base Insertion | 74258 | 1.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | ATA | Context | Base Deletion | 74258 | 0.76 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | ATC | Context | Base Insertion | 79821 | 0.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | ATC | Context | Base Deletion | 79821 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | ATG | Context | Base Insertion | 114821 | 1.62 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | ATG | Context | Base Deletion | 114821 | 0.81 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | ATT | Context | Base Insertion | 107955 | 0.61 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | ATT | Context | Base Deletion | 107955 | 2.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | CA | Context | Base Substitution | 597431 | 1275.79 | 27.00 | 29.93 | -2.93 | Before |
| REGRESSION.HCC1395_tumor.L005 | CAA | Context | Base Insertion | 112818 | 2.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | CAA | Context | Base Deletion | 112818 | 2.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | CAC | Context | Base Insertion | 126040 | 7.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | CAC | Context | Base Deletion | 126040 | 8.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | CAG | Context | Base Insertion | 214637 | 5.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | CAG | Context | Base Deletion | 214637 | 10.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | CAT | Context | Base Insertion | 111574 | 0.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | CAT | Context | Base Deletion | 111574 | 0.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | CC | Context | Base Substitution | 558146 | 1838.95 | 25.00 | 28.88 | -3.88 | Before |
| REGRESSION.HCC1395_tumor.L005 | CCA | Context | Base Insertion | 178102 | 2.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | CCA | Context | Base Deletion | 178102 | 1.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | CCC | Context | Base Insertion | 154208 | 6.02 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | CCC | Context | Base Deletion | 154208 | 5.65 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | CCG | Context | Base Insertion | 37618 | 0.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | CCG | Context | Base Deletion | 37618 | 1.66 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | CCT | Context | Base Insertion | 179770 | 1.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | CCT | Context | Base Deletion | 179770 | 4.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | CG | Context | Base Substitution | 114556 | 368.88 | 26.00 | 29.61 | -3.61 | Before |
| REGRESSION.HCC1395_tumor.L005 | CGA | Context | Base Insertion | 44716 | 0.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | CGA | Context | Base Deletion | 44716 | 0.12 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | CGC | Context | Base Insertion | 64593 | 0.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | CGC | Context | Base Deletion | 64593 | 3.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | CGG | Context | Base Insertion | 77479 | 0.82 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | CGG | Context | Base Deletion | 77479 | 3.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | CGT | Context | Base Insertion | 49219 | 0.09 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | CGT | Context | Base Deletion | 49219 | 0.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | CT | Context | Base Substitution | 601914 | 469.54 | 31.00 | 32.45 | -1.45 | Before |
| REGRESSION.HCC1395_tumor.L005 | CTA | Context | Base Insertion | 59080 | 0.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | CTA | Context | Base Deletion | 59080 | 2.81 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | CTC | Context | Base Insertion | 147343 | 1.73 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | CTC | Context | Base Deletion | 147343 | 6.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | CTG | Context | Base Insertion | 216569 | 1.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | CTG | Context | Base Deletion | 216569 | 4.79 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | CTT | Context | Base Insertion | 146282 | 4.78 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | CTT | Context | Base Deletion | 146282 | 4.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | GA | Context | Base Substitution | 498557 | 870.12 | 28.00 | 29.52 | -1.52 | Before |
| REGRESSION.HCC1395_tumor.L005 | GAA | Context | Base Insertion | 141546 | 1.77 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | GAA | Context | Base Deletion | 141546 | 3.87 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | GAC | Context | Base Insertion | 84030 | 0.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | GAC | Context | Base Deletion | 84030 | 1.76 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | GAG | Context | Base Insertion | 151091 | 0.09 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | GAG | Context | Base Deletion | 151091 | 3.12 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | GAT | Context | Base Insertion | 83982 | 0.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | GAT | Context | Base Deletion | 83982 | 0.85 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | GC | Context | Base Substitution | 492917 | 1154.63 | 27.00 | 30.14 | -3.14 | Before |
| REGRESSION.HCC1395_tumor.L005 | GCA | Context | Base Insertion | 149802 | 2.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | GCA | Context | Base Deletion | 149802 | 3.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | GCC | Context | Base Insertion | 148544 | 0.52 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | GCC | Context | Base Deletion | 148544 | 4.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | GCG | Context | Base Insertion | 36478 | 1.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | GCG | Context | Base Deletion | 36478 | 1.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | GCT | Context | Base Insertion | 157471 | 2.97 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | GCT | Context | Base Deletion | 157471 | 2.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | GG | Context | Base Substitution | 582896 | 780.31 | 29.00 | 31.71 | -2.71 | Before |
| REGRESSION.HCC1395_tumor.L005 | GGA | Context | Base Insertion | 157618 | 1.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | GGA | Context | Base Deletion | 157618 | 4.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | GGC | Context | Base Insertion | 146713 | 1.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | GGC | Context | Base Deletion | 146713 | 5.03 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | GGG | Context | Base Insertion | 160300 | 5.80 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | GGG | Context | Base Deletion | 160300 | 8.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | GGT | Context | Base Insertion | 116098 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | GGT | Context | Base Deletion | 116098 | 1.21 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | GT | Context | Base Substitution | 410483 | 716.50 | 28.00 | 31.99 | -3.99 | Before |
| REGRESSION.HCC1395_tumor.L005 | GTA | Context | Base Insertion | 65946 | 1.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | GTA | Context | Base Deletion | 65946 | 1.01 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | GTC | Context | Base Insertion | 91595 | 0.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | GTC | Context | Base Deletion | 91595 | 0.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | GTG | Context | Base Insertion | 141450 | 1.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | GTG | Context | Base Deletion | 141450 | 4.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | GTT | Context | Base Insertion | 99772 | 0.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | GTT | Context | Base Deletion | 99772 | 0.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | TA | Context | Base Substitution | 288054 | 832.09 | 26.00 | 29.78 | -3.78 | Before |
| REGRESSION.HCC1395_tumor.L005 | TAA | Context | Base Insertion | 87580 | 1.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | TAA | Context | Base Deletion | 87580 | 3.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | TAC | Context | Base Insertion | 60327 | 0.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | TAC | Context | Base Deletion | 60327 | 3.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | TAG | Context | Base Insertion | 59892 | 0.04 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | TAG | Context | Base Deletion | 59892 | 0.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | TAT | Context | Base Insertion | 70322 | 0.87 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | TAT | Context | Base Deletion | 70322 | 1.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | TC | Context | Base Substitution | 451346 | 1009.42 | 27.00 | 30.53 | -3.53 | Before |
| REGRESSION.HCC1395_tumor.L005 | TCA | Context | Base Insertion | 132219 | 1.57 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | TCA | Context | Base Deletion | 132219 | 5.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | TCC | Context | Base Insertion | 146362 | 0.96 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | TCC | Context | Base Deletion | 146362 | 3.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | TCG | Context | Base Insertion | 18732 | 0.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | TCG | Context | Base Deletion | 18732 | 0.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | TCT | Context | Base Insertion | 154845 | 1.85 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | TCT | Context | Base Deletion | 154845 | 5.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | TG | Context | Base Substitution | 591102 | 481.20 | 31.00 | 31.73 | -0.73 | Before |
| REGRESSION.HCC1395_tumor.L005 | TGA | Context | Base Insertion | 139808 | 0.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | TGA | Context | Base Deletion | 139808 | 1.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | TGC | Context | Base Insertion | 137415 | 1.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | TGC | Context | Base Deletion | 137415 | 1.62 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | TGG | Context | Base Insertion | 175453 | 1.61 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | TGG | Context | Base Deletion | 175453 | 2.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | TGT | Context | Base Insertion | 139464 | 1.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | TGT | Context | Base Deletion | 139464 | 4.61 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | TT | Context | Base Substitution | 535630 | 710.65 | 29.00 | 32.90 | -3.90 | Before |
| REGRESSION.HCC1395_tumor.L005 | TTA | Context | Base Insertion | 86495 | 2.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | TTA | Context | Base Deletion | 86495 | 2.94 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | TTC | Context | Base Insertion | 129813 | 1.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | TTC | Context | Base Deletion | 129813 | 6.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | TTG | Context | Base Insertion | 114032 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | TTG | Context | Base Deletion | 114032 | 2.02 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | TTT | Context | Base Insertion | 178039 | 14.90 | 44.00 | 45.00 | -1.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | TTT | Context | Base Deletion | 178039 | 51.71 | 43.00 | 45.00 | -2.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -1 | Cycle | Base Substitution | 26826 | 85.95 | 25.00 | 25.86 | -0.86 | Before |
| REGRESSION.HCC1395_tumor.L005 | -10 | Cycle | Base Substitution | 27071 | 40.64 | 30.00 | 31.24 | -1.24 | Before |
| REGRESSION.HCC1395_tumor.L005 | -10 | Cycle | Base Insertion | 27071 | 0.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -10 | Cycle | Base Deletion | 27071 | 0.60 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -100 | Cycle | Base Substitution | 24881 | 49.33 | 29.00 | 30.09 | -1.09 | Before |
| REGRESSION.HCC1395_tumor.L005 | -100 | Cycle | Base Insertion | 24613 | 0.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -100 | Cycle | Base Deletion | 24613 | 0.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -101 | Cycle | Base Substitution | 24840 | 66.04 | 28.00 | 30.11 | -2.11 | Before |
| REGRESSION.HCC1395_tumor.L005 | -101 | Cycle | Base Insertion | 24568 | 0.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -101 | Cycle | Base Deletion | 24568 | 0.73 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -102 | Cycle | Base Substitution | 24735 | 46.83 | 28.00 | 29.95 | -1.95 | Before |
| REGRESSION.HCC1395_tumor.L005 | -102 | Cycle | Base Insertion | 24465 | 0.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -102 | Cycle | Base Deletion | 24465 | 0.78 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -103 | Cycle | Base Substitution | 24703 | 59.16 | 29.00 | 30.24 | -1.24 | Before |
| REGRESSION.HCC1395_tumor.L005 | -103 | Cycle | Base Insertion | 24442 | 0.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -103 | Cycle | Base Deletion | 24442 | 1.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -104 | Cycle | Base Substitution | 24601 | 44.43 | 29.00 | 30.31 | -1.31 | Before |
| REGRESSION.HCC1395_tumor.L005 | -104 | Cycle | Base Insertion | 24352 | 0.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -104 | Cycle | Base Deletion | 24352 | 1.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -105 | Cycle | Base Substitution | 24478 | 44.82 | 28.00 | 29.86 | -1.86 | Before |
| REGRESSION.HCC1395_tumor.L005 | -105 | Cycle | Base Insertion | 24227 | 0.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -105 | Cycle | Base Deletion | 24227 | 1.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -106 | Cycle | Base Substitution | 24527 | 42.88 | 28.00 | 29.98 | -1.98 | Before |
| REGRESSION.HCC1395_tumor.L005 | -106 | Cycle | Base Insertion | 24278 | 0.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -106 | Cycle | Base Deletion | 24278 | 1.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -107 | Cycle | Base Substitution | 24346 | 40.98 | 29.00 | 30.06 | -1.06 | Before |
| REGRESSION.HCC1395_tumor.L005 | -107 | Cycle | Base Insertion | 24086 | 0.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -107 | Cycle | Base Deletion | 24086 | 1.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -108 | Cycle | Base Substitution | 24360 | 54.01 | 29.00 | 30.09 | -1.09 | Before |
| REGRESSION.HCC1395_tumor.L005 | -108 | Cycle | Base Insertion | 24091 | 0.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -108 | Cycle | Base Deletion | 24091 | 1.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -109 | Cycle | Base Substitution | 24388 | 44.25 | 29.00 | 30.16 | -1.16 | Before |
| REGRESSION.HCC1395_tumor.L005 | -109 | Cycle | Base Insertion | 24128 | 0.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -109 | Cycle | Base Deletion | 24128 | 1.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -11 | Cycle | Base Substitution | 26977 | 40.01 | 30.00 | 31.21 | -1.21 | Before |
| REGRESSION.HCC1395_tumor.L005 | -11 | Cycle | Base Insertion | 26977 | 0.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -11 | Cycle | Base Deletion | 26977 | 0.85 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -110 | Cycle | Base Substitution | 24322 | 50.43 | 28.00 | 29.96 | -1.96 | Before |
| REGRESSION.HCC1395_tumor.L005 | -110 | Cycle | Base Insertion | 24046 | 0.03 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -110 | Cycle | Base Deletion | 24046 | 1.21 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -111 | Cycle | Base Substitution | 24301 | 37.60 | 29.00 | 29.93 | -0.93 | Before |
| REGRESSION.HCC1395_tumor.L005 | -111 | Cycle | Base Insertion | 24027 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -111 | Cycle | Base Deletion | 24027 | 1.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -112 | Cycle | Base Substitution | 24214 | 42.25 | 28.00 | 29.88 | -1.88 | Before |
| REGRESSION.HCC1395_tumor.L005 | -112 | Cycle | Base Insertion | 23922 | 0.03 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -112 | Cycle | Base Deletion | 23922 | 1.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -113 | Cycle | Base Substitution | 24089 | 53.82 | 28.00 | 29.81 | -1.81 | Before |
| REGRESSION.HCC1395_tumor.L005 | -113 | Cycle | Base Insertion | 23794 | 0.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -113 | Cycle | Base Deletion | 23794 | 0.99 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -114 | Cycle | Base Substitution | 23984 | 53.62 | 28.00 | 29.69 | -1.69 | Before |
| REGRESSION.HCC1395_tumor.L005 | -114 | Cycle | Base Insertion | 23707 | 0.07 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -114 | Cycle | Base Deletion | 23707 | 1.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -115 | Cycle | Base Substitution | 23891 | 59.99 | 28.00 | 29.80 | -1.80 | Before |
| REGRESSION.HCC1395_tumor.L005 | -115 | Cycle | Base Insertion | 23590 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -115 | Cycle | Base Deletion | 23590 | 1.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -116 | Cycle | Base Substitution | 23871 | 53.29 | 28.00 | 29.61 | -1.61 | Before |
| REGRESSION.HCC1395_tumor.L005 | -116 | Cycle | Base Insertion | 23575 | 0.07 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -116 | Cycle | Base Deletion | 23575 | 0.82 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -117 | Cycle | Base Substitution | 23867 | 60.60 | 28.00 | 29.83 | -1.83 | Before |
| REGRESSION.HCC1395_tumor.L005 | -117 | Cycle | Base Insertion | 23564 | 0.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -117 | Cycle | Base Deletion | 23564 | 0.75 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -118 | Cycle | Base Substitution | 23775 | 55.20 | 28.00 | 29.70 | -1.70 | Before |
| REGRESSION.HCC1395_tumor.L005 | -118 | Cycle | Base Insertion | 23467 | 0.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -118 | Cycle | Base Deletion | 23467 | 0.86 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -119 | Cycle | Base Substitution | 23716 | 49.22 | 28.00 | 29.79 | -1.79 | Before |
| REGRESSION.HCC1395_tumor.L005 | -119 | Cycle | Base Insertion | 23422 | 0.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -119 | Cycle | Base Deletion | 23422 | 0.82 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -12 | Cycle | Base Substitution | 26995 | 46.96 | 30.00 | 31.72 | -1.72 | Before |
| REGRESSION.HCC1395_tumor.L005 | -12 | Cycle | Base Insertion | 26995 | 0.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -12 | Cycle | Base Deletion | 26995 | 1.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -120 | Cycle | Base Substitution | 23695 | 46.67 | 28.00 | 29.75 | -1.75 | Before |
| REGRESSION.HCC1395_tumor.L005 | -120 | Cycle | Base Insertion | 23393 | 0.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -120 | Cycle | Base Deletion | 23393 | 0.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -121 | Cycle | Base Substitution | 23546 | 42.78 | 28.00 | 29.55 | -1.55 | Before |
| REGRESSION.HCC1395_tumor.L005 | -121 | Cycle | Base Insertion | 23252 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -121 | Cycle | Base Deletion | 23252 | 0.78 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -122 | Cycle | Base Substitution | 23509 | 51.77 | 28.00 | 29.91 | -1.91 | Before |
| REGRESSION.HCC1395_tumor.L005 | -122 | Cycle | Base Insertion | 23217 | 0.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -122 | Cycle | Base Deletion | 23217 | 0.95 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -123 | Cycle | Base Substitution | 23462 | 43.09 | 28.00 | 29.50 | -1.50 | Before |
| REGRESSION.HCC1395_tumor.L005 | -123 | Cycle | Base Insertion | 23156 | 0.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -123 | Cycle | Base Deletion | 23156 | 0.67 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -124 | Cycle | Base Substitution | 23367 | 64.31 | 28.00 | 29.73 | -1.73 | Before |
| REGRESSION.HCC1395_tumor.L005 | -124 | Cycle | Base Insertion | 23061 | 0.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -124 | Cycle | Base Deletion | 23061 | 0.84 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -125 | Cycle | Base Substitution | 23389 | 48.34 | 28.00 | 29.87 | -1.87 | Before |
| REGRESSION.HCC1395_tumor.L005 | -125 | Cycle | Base Insertion | 23084 | 0.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -125 | Cycle | Base Deletion | 23084 | 0.84 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -126 | Cycle | Base Substitution | 23228 | 37.19 | 29.00 | 30.09 | -1.09 | Before |
| REGRESSION.HCC1395_tumor.L005 | -126 | Cycle | Base Insertion | 22932 | 0.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -126 | Cycle | Base Deletion | 22932 | 0.94 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -127 | Cycle | Base Substitution | 23114 | 33.97 | 29.00 | 30.10 | -1.10 | Before |
| REGRESSION.HCC1395_tumor.L005 | -127 | Cycle | Base Insertion | 22796 | 0.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -127 | Cycle | Base Deletion | 22796 | 0.76 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -128 | Cycle | Base Substitution | 23090 | 51.24 | 28.00 | 29.83 | -1.83 | Before |
| REGRESSION.HCC1395_tumor.L005 | -128 | Cycle | Base Insertion | 22759 | 0.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -128 | Cycle | Base Deletion | 22759 | 0.90 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -129 | Cycle | Base Substitution | 23059 | 44.91 | 28.00 | 29.78 | -1.78 | Before |
| REGRESSION.HCC1395_tumor.L005 | -129 | Cycle | Base Insertion | 22736 | 0.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -129 | Cycle | Base Deletion | 22736 | 0.82 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -13 | Cycle | Base Substitution | 26975 | 47.22 | 30.00 | 31.41 | -1.41 | Before |
| REGRESSION.HCC1395_tumor.L005 | -13 | Cycle | Base Insertion | 26975 | 0.77 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -13 | Cycle | Base Deletion | 26975 | 1.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -130 | Cycle | Base Substitution | 22908 | 45.96 | 28.00 | 29.80 | -1.80 | Before |
| REGRESSION.HCC1395_tumor.L005 | -130 | Cycle | Base Insertion | 22586 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -130 | Cycle | Base Deletion | 22586 | 1.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -131 | Cycle | Base Substitution | 22917 | 44.22 | 28.00 | 29.49 | -1.49 | Before |
| REGRESSION.HCC1395_tumor.L005 | -131 | Cycle | Base Insertion | 22584 | 0.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -131 | Cycle | Base Deletion | 22584 | 1.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -132 | Cycle | Base Substitution | 22813 | 43.78 | 28.00 | 29.67 | -1.67 | Before |
| REGRESSION.HCC1395_tumor.L005 | -132 | Cycle | Base Insertion | 22486 | 0.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -132 | Cycle | Base Deletion | 22486 | 0.95 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -133 | Cycle | Base Substitution | 22757 | 45.92 | 28.00 | 29.42 | -1.42 | Before |
| REGRESSION.HCC1395_tumor.L005 | -133 | Cycle | Base Insertion | 22433 | 0.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -133 | Cycle | Base Deletion | 22433 | 0.98 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -134 | Cycle | Base Substitution | 22739 | 48.85 | 28.00 | 29.66 | -1.66 | Before |
| REGRESSION.HCC1395_tumor.L005 | -134 | Cycle | Base Insertion | 22405 | 0.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -134 | Cycle | Base Deletion | 22405 | 0.98 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -135 | Cycle | Base Substitution | 22529 | 53.08 | 28.00 | 29.66 | -1.66 | Before |
| REGRESSION.HCC1395_tumor.L005 | -135 | Cycle | Base Insertion | 22196 | 0.81 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -135 | Cycle | Base Deletion | 22196 | 0.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -136 | Cycle | Base Substitution | 22536 | 32.05 | 30.00 | 30.03 | -0.03 | Before |
| REGRESSION.HCC1395_tumor.L005 | -136 | Cycle | Base Insertion | 22197 | 0.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -136 | Cycle | Base Deletion | 22197 | 0.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -137 | Cycle | Base Substitution | 22377 | 44.53 | 28.00 | 29.48 | -1.48 | Before |
| REGRESSION.HCC1395_tumor.L005 | -137 | Cycle | Base Insertion | 22024 | 0.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -137 | Cycle | Base Deletion | 22024 | 0.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -138 | Cycle | Base Substitution | 22353 | 57.81 | 28.00 | 29.43 | -1.43 | Before |
| REGRESSION.HCC1395_tumor.L005 | -138 | Cycle | Base Insertion | 21973 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -138 | Cycle | Base Deletion | 21973 | 0.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -139 | Cycle | Base Substitution | 22352 | 37.40 | 29.00 | 30.01 | -1.01 | Before |
| REGRESSION.HCC1395_tumor.L005 | -139 | Cycle | Base Insertion | 21977 | 0.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -139 | Cycle | Base Deletion | 21977 | 0.07 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -14 | Cycle | Base Substitution | 27061 | 39.26 | 30.00 | 31.67 | -1.67 | Before |
| REGRESSION.HCC1395_tumor.L005 | -14 | Cycle | Base Insertion | 27061 | 0.87 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -14 | Cycle | Base Deletion | 27061 | 1.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -140 | Cycle | Base Substitution | 22215 | 37.58 | 29.00 | 29.65 | -0.65 | Before |
| REGRESSION.HCC1395_tumor.L005 | -140 | Cycle | Base Insertion | 21823 | 0.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -140 | Cycle | Base Deletion | 21823 | 0.07 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -141 | Cycle | Base Substitution | 22039 | 32.00 | 29.00 | 29.67 | -0.67 | Before |
| REGRESSION.HCC1395_tumor.L005 | -141 | Cycle | Base Insertion | 21641 | 0.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -141 | Cycle | Base Deletion | 21641 | 0.07 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -142 | Cycle | Base Substitution | 21999 | 32.71 | 29.00 | 30.00 | -1.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -142 | Cycle | Base Insertion | 21583 | 0.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -142 | Cycle | Base Deletion | 21583 | 0.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -143 | Cycle | Base Substitution | 21918 | 33.02 | 29.00 | 30.00 | -1.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -143 | Cycle | Base Insertion | 21472 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -143 | Cycle | Base Deletion | 21472 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -144 | Cycle | Base Substitution | 21798 | 32.01 | 30.00 | 30.32 | -0.32 | Before |
| REGRESSION.HCC1395_tumor.L005 | -144 | Cycle | Base Insertion | 21319 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -144 | Cycle | Base Deletion | 21319 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -145 | Cycle | Base Substitution | 21819 | 39.88 | 28.00 | 29.84 | -1.84 | Before |
| REGRESSION.HCC1395_tumor.L005 | -145 | Cycle | Base Insertion | 16758 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -145 | Cycle | Base Deletion | 16758 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -146 | Cycle | Base Substitution | 21700 | 65.94 | 28.00 | 30.29 | -2.29 | Before |
| REGRESSION.HCC1395_tumor.L005 | -146 | Cycle | Base Insertion | 16669 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -146 | Cycle | Base Deletion | 16669 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -147 | Cycle | Base Substitution | 21619 | 231.05 | 23.00 | 29.89 | -6.89 | Before |
| REGRESSION.HCC1395_tumor.L005 | -148 | Cycle | Base Substitution | 21412 | 869.85 | 15.00 | 29.96 | -14.96 | Before |
| REGRESSION.HCC1395_tumor.L005 | -149 | Cycle | Base Substitution | 13338 | 797.36 | 14.00 | 30.90 | -16.90 | Before |
| REGRESSION.HCC1395_tumor.L005 | -15 | Cycle | Base Substitution | 27101 | 27.44 | 31.00 | 31.72 | -0.72 | Before |
| REGRESSION.HCC1395_tumor.L005 | -15 | Cycle | Base Insertion | 27101 | 1.77 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -15 | Cycle | Base Deletion | 27101 | 1.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -150 | Cycle | Base Substitution | 4697 | 6.44 | 30.00 | 30.41 | -0.41 | Before |
| REGRESSION.HCC1395_tumor.L005 | -16 | Cycle | Base Substitution | 27012 | 34.24 | 30.00 | 31.69 | -1.69 | Before |
| REGRESSION.HCC1395_tumor.L005 | -16 | Cycle | Base Insertion | 27012 | 0.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -16 | Cycle | Base Deletion | 27012 | 1.78 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -17 | Cycle | Base Substitution | 27003 | 33.90 | 30.00 | 31.65 | -1.65 | Before |
| REGRESSION.HCC1395_tumor.L005 | -17 | Cycle | Base Insertion | 27003 | 0.91 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -17 | Cycle | Base Deletion | 27003 | 1.75 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -18 | Cycle | Base Substitution | 27017 | 30.56 | 31.00 | 31.90 | -0.90 | Before |
| REGRESSION.HCC1395_tumor.L005 | -18 | Cycle | Base Insertion | 27017 | 1.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -18 | Cycle | Base Deletion | 27017 | 1.77 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -19 | Cycle | Base Substitution | 26910 | 41.76 | 30.00 | 31.75 | -1.75 | Before |
| REGRESSION.HCC1395_tumor.L005 | -19 | Cycle | Base Insertion | 26910 | 1.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -19 | Cycle | Base Deletion | 26910 | 1.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -2 | Cycle | Base Substitution | 27240 | 77.86 | 27.00 | 28.71 | -1.71 | Before |
| REGRESSION.HCC1395_tumor.L005 | -20 | Cycle | Base Substitution | 26963 | 29.12 | 31.00 | 31.74 | -0.74 | Before |
| REGRESSION.HCC1395_tumor.L005 | -20 | Cycle | Base Insertion | 26963 | 0.61 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -20 | Cycle | Base Deletion | 26963 | 1.52 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -21 | Cycle | Base Substitution | 26921 | 37.62 | 30.00 | 31.78 | -1.78 | Before |
| REGRESSION.HCC1395_tumor.L005 | -21 | Cycle | Base Insertion | 26921 | 0.57 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -21 | Cycle | Base Deletion | 26921 | 1.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -22 | Cycle | Base Substitution | 26958 | 32.64 | 30.00 | 31.58 | -1.58 | Before |
| REGRESSION.HCC1395_tumor.L005 | -22 | Cycle | Base Insertion | 26958 | 0.84 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -22 | Cycle | Base Deletion | 26958 | 1.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -23 | Cycle | Base Substitution | 26904 | 33.61 | 30.00 | 31.60 | -1.60 | Before |
| REGRESSION.HCC1395_tumor.L005 | -23 | Cycle | Base Insertion | 26904 | 0.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -23 | Cycle | Base Deletion | 26904 | 1.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -24 | Cycle | Base Substitution | 26939 | 40.29 | 30.00 | 31.70 | -1.70 | Before |
| REGRESSION.HCC1395_tumor.L005 | -24 | Cycle | Base Insertion | 26939 | 0.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -24 | Cycle | Base Deletion | 26939 | 1.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -25 | Cycle | Base Substitution | 26953 | 38.23 | 30.00 | 31.67 | -1.67 | Before |
| REGRESSION.HCC1395_tumor.L005 | -25 | Cycle | Base Insertion | 26953 | 0.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -25 | Cycle | Base Deletion | 26953 | 1.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -26 | Cycle | Base Substitution | 26908 | 52.02 | 29.00 | 30.25 | -1.25 | Before |
| REGRESSION.HCC1395_tumor.L005 | -26 | Cycle | Base Insertion | 26908 | 0.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -26 | Cycle | Base Deletion | 26908 | 0.86 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -27 | Cycle | Base Substitution | 26872 | 37.68 | 29.00 | 30.38 | -1.38 | Before |
| REGRESSION.HCC1395_tumor.L005 | -27 | Cycle | Base Insertion | 26872 | 0.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -27 | Cycle | Base Deletion | 26872 | 0.83 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -28 | Cycle | Base Substitution | 26920 | 50.51 | 28.00 | 29.95 | -1.95 | Before |
| REGRESSION.HCC1395_tumor.L005 | -28 | Cycle | Base Insertion | 26919 | 0.52 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -28 | Cycle | Base Deletion | 26919 | 0.84 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -29 | Cycle | Base Substitution | 26900 | 40.86 | 29.00 | 30.18 | -1.18 | Before |
| REGRESSION.HCC1395_tumor.L005 | -29 | Cycle | Base Insertion | 26898 | 0.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -29 | Cycle | Base Deletion | 26898 | 1.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -3 | Cycle | Base Substitution | 27295 | 70.50 | 28.00 | 29.59 | -1.59 | Before |
| REGRESSION.HCC1395_tumor.L005 | -30 | Cycle | Base Substitution | 26918 | 40.20 | 29.00 | 30.09 | -1.09 | Before |
| REGRESSION.HCC1395_tumor.L005 | -30 | Cycle | Base Insertion | 26916 | 0.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -30 | Cycle | Base Deletion | 26916 | 1.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -31 | Cycle | Base Substitution | 26803 | 45.56 | 29.00 | 30.55 | -1.55 | Before |
| REGRESSION.HCC1395_tumor.L005 | -31 | Cycle | Base Insertion | 26801 | 0.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -31 | Cycle | Base Deletion | 26801 | 1.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -32 | Cycle | Base Substitution | 26910 | 34.24 | 30.00 | 30.60 | -0.60 | Before |
| REGRESSION.HCC1395_tumor.L005 | -32 | Cycle | Base Insertion | 26909 | 0.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -32 | Cycle | Base Deletion | 26909 | 1.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -33 | Cycle | Base Substitution | 26885 | 41.80 | 29.00 | 30.31 | -1.31 | Before |
| REGRESSION.HCC1395_tumor.L005 | -33 | Cycle | Base Insertion | 26884 | 0.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -33 | Cycle | Base Deletion | 26884 | 1.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -34 | Cycle | Base Substitution | 26927 | 39.06 | 29.00 | 30.28 | -1.28 | Before |
| REGRESSION.HCC1395_tumor.L005 | -34 | Cycle | Base Insertion | 26926 | 0.96 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -34 | Cycle | Base Deletion | 26926 | 1.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -35 | Cycle | Base Substitution | 26872 | 50.03 | 29.00 | 30.11 | -1.11 | Before |
| REGRESSION.HCC1395_tumor.L005 | -35 | Cycle | Base Insertion | 26870 | 0.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -35 | Cycle | Base Deletion | 26870 | 1.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -36 | Cycle | Base Substitution | 26787 | 35.44 | 30.00 | 30.44 | -0.44 | Before |
| REGRESSION.HCC1395_tumor.L005 | -36 | Cycle | Base Insertion | 26785 | 0.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -36 | Cycle | Base Deletion | 26785 | 1.52 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -37 | Cycle | Base Substitution | 26803 | 36.19 | 30.00 | 30.36 | -0.36 | Before |
| REGRESSION.HCC1395_tumor.L005 | -37 | Cycle | Base Insertion | 26802 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -37 | Cycle | Base Deletion | 26802 | 1.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -38 | Cycle | Base Substitution | 26793 | 24.93 | 30.00 | 30.57 | -0.57 | Before |
| REGRESSION.HCC1395_tumor.L005 | -38 | Cycle | Base Insertion | 26792 | 0.67 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -38 | Cycle | Base Deletion | 26792 | 1.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -39 | Cycle | Base Substitution | 26863 | 41.55 | 29.00 | 30.48 | -1.48 | Before |
| REGRESSION.HCC1395_tumor.L005 | -39 | Cycle | Base Insertion | 26863 | 0.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -39 | Cycle | Base Deletion | 26863 | 0.90 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -4 | Cycle | Base Substitution | 27148 | 68.64 | 28.00 | 29.66 | -1.66 | Before |
| REGRESSION.HCC1395_tumor.L005 | -40 | Cycle | Base Substitution | 26822 | 44.68 | 29.00 | 30.41 | -1.41 | Before |
| REGRESSION.HCC1395_tumor.L005 | -40 | Cycle | Base Insertion | 26821 | 0.21 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -40 | Cycle | Base Deletion | 26821 | 1.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -41 | Cycle | Base Substitution | 26770 | 36.09 | 30.00 | 30.31 | -0.31 | Before |
| REGRESSION.HCC1395_tumor.L005 | -41 | Cycle | Base Insertion | 26769 | 0.21 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -41 | Cycle | Base Deletion | 26769 | 1.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -42 | Cycle | Base Substitution | 26735 | 42.56 | 29.00 | 30.36 | -1.36 | Before |
| REGRESSION.HCC1395_tumor.L005 | -42 | Cycle | Base Insertion | 26732 | 0.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -42 | Cycle | Base Deletion | 26732 | 1.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -43 | Cycle | Base Substitution | 26733 | 37.32 | 30.00 | 30.59 | -0.59 | Before |
| REGRESSION.HCC1395_tumor.L005 | -43 | Cycle | Base Insertion | 26729 | 0.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -43 | Cycle | Base Deletion | 26729 | 1.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -44 | Cycle | Base Substitution | 26629 | 40.46 | 29.00 | 30.29 | -1.29 | Before |
| REGRESSION.HCC1395_tumor.L005 | -44 | Cycle | Base Insertion | 26625 | 0.65 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -44 | Cycle | Base Deletion | 26625 | 1.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -45 | Cycle | Base Substitution | 26578 | 43.28 | 29.00 | 30.36 | -1.36 | Before |
| REGRESSION.HCC1395_tumor.L005 | -45 | Cycle | Base Insertion | 26573 | 0.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -45 | Cycle | Base Deletion | 26573 | 1.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -46 | Cycle | Base Substitution | 26726 | 47.03 | 29.00 | 30.49 | -1.49 | Before |
| REGRESSION.HCC1395_tumor.L005 | -46 | Cycle | Base Insertion | 26719 | 0.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -46 | Cycle | Base Deletion | 26719 | 1.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -47 | Cycle | Base Substitution | 26684 | 45.33 | 29.00 | 30.56 | -1.56 | Before |
| REGRESSION.HCC1395_tumor.L005 | -47 | Cycle | Base Insertion | 26673 | 0.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -47 | Cycle | Base Deletion | 26673 | 1.04 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -48 | Cycle | Base Substitution | 26631 | 42.91 | 29.00 | 30.26 | -1.26 | Before |
| REGRESSION.HCC1395_tumor.L005 | -48 | Cycle | Base Insertion | 26616 | 0.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -48 | Cycle | Base Deletion | 26616 | 1.03 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -49 | Cycle | Base Substitution | 26683 | 32.64 | 30.00 | 30.90 | -0.90 | Before |
| REGRESSION.HCC1395_tumor.L005 | -49 | Cycle | Base Insertion | 26665 | 0.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -49 | Cycle | Base Deletion | 26665 | 1.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -5 | Cycle | Base Substitution | 27204 | 51.12 | 29.00 | 30.25 | -1.25 | Before |
| REGRESSION.HCC1395_tumor.L005 | -5 | Cycle | Base Insertion | 27204 | 0.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -5 | Cycle | Base Deletion | 27204 | 0.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -50 | Cycle | Base Substitution | 26688 | 46.13 | 29.00 | 30.53 | -1.53 | Before |
| REGRESSION.HCC1395_tumor.L005 | -50 | Cycle | Base Insertion | 26668 | 0.77 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -50 | Cycle | Base Deletion | 26668 | 1.52 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -51 | Cycle | Base Substitution | 26600 | 38.26 | 29.00 | 30.56 | -1.56 | Before |
| REGRESSION.HCC1395_tumor.L005 | -51 | Cycle | Base Insertion | 26580 | 0.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -51 | Cycle | Base Deletion | 26580 | 1.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -52 | Cycle | Base Substitution | 26578 | 36.43 | 30.00 | 30.57 | -0.57 | Before |
| REGRESSION.HCC1395_tumor.L005 | -52 | Cycle | Base Insertion | 26549 | 0.84 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -52 | Cycle | Base Deletion | 26549 | 1.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -53 | Cycle | Base Substitution | 26657 | 35.22 | 30.00 | 30.72 | -0.72 | Before |
| REGRESSION.HCC1395_tumor.L005 | -53 | Cycle | Base Insertion | 26625 | 0.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -53 | Cycle | Base Deletion | 26625 | 0.76 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -54 | Cycle | Base Substitution | 26699 | 37.21 | 30.00 | 30.84 | -0.84 | Before |
| REGRESSION.HCC1395_tumor.L005 | -54 | Cycle | Base Insertion | 26659 | 0.57 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -54 | Cycle | Base Deletion | 26659 | 0.96 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -55 | Cycle | Base Substitution | 26583 | 48.79 | 29.00 | 30.79 | -1.79 | Before |
| REGRESSION.HCC1395_tumor.L005 | -55 | Cycle | Base Insertion | 26546 | 1.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -55 | Cycle | Base Deletion | 26546 | 0.93 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -56 | Cycle | Base Substitution | 26493 | 49.16 | 29.00 | 30.42 | -1.42 | Before |
| REGRESSION.HCC1395_tumor.L005 | -56 | Cycle | Base Insertion | 26454 | 0.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -56 | Cycle | Base Deletion | 26454 | 1.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -57 | Cycle | Base Substitution | 26611 | 43.92 | 29.00 | 30.62 | -1.62 | Before |
| REGRESSION.HCC1395_tumor.L005 | -57 | Cycle | Base Insertion | 26577 | 0.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -57 | Cycle | Base Deletion | 26577 | 0.81 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -58 | Cycle | Base Substitution | 26475 | 43.97 | 29.00 | 30.34 | -1.34 | Before |
| REGRESSION.HCC1395_tumor.L005 | -58 | Cycle | Base Insertion | 26435 | 0.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -58 | Cycle | Base Deletion | 26435 | 0.78 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -59 | Cycle | Base Substitution | 26465 | 40.98 | 29.00 | 30.62 | -1.62 | Before |
| REGRESSION.HCC1395_tumor.L005 | -59 | Cycle | Base Insertion | 26420 | 0.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -59 | Cycle | Base Deletion | 26420 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -6 | Cycle | Base Substitution | 27127 | 48.43 | 29.00 | 30.75 | -1.75 | Before |
| REGRESSION.HCC1395_tumor.L005 | -6 | Cycle | Base Insertion | 27127 | 0.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -6 | Cycle | Base Deletion | 27127 | 0.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -60 | Cycle | Base Substitution | 26510 | 42.62 | 29.00 | 30.41 | -1.41 | Before |
| REGRESSION.HCC1395_tumor.L005 | -60 | Cycle | Base Insertion | 26468 | 0.21 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -60 | Cycle | Base Deletion | 26468 | 0.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -61 | Cycle | Base Substitution | 26561 | 41.58 | 29.00 | 30.59 | -1.59 | Before |
| REGRESSION.HCC1395_tumor.L005 | -61 | Cycle | Base Insertion | 26508 | 0.77 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -61 | Cycle | Base Deletion | 26508 | 0.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -62 | Cycle | Base Substitution | 26515 | 43.89 | 29.00 | 30.79 | -1.79 | Before |
| REGRESSION.HCC1395_tumor.L005 | -62 | Cycle | Base Insertion | 26452 | 0.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -62 | Cycle | Base Deletion | 26452 | 0.60 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -63 | Cycle | Base Substitution | 26484 | 41.73 | 29.00 | 30.68 | -1.68 | Before |
| REGRESSION.HCC1395_tumor.L005 | -63 | Cycle | Base Insertion | 26417 | 0.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -63 | Cycle | Base Deletion | 26417 | 0.65 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -64 | Cycle | Base Substitution | 26427 | 41.25 | 29.00 | 30.69 | -1.69 | Before |
| REGRESSION.HCC1395_tumor.L005 | -64 | Cycle | Base Insertion | 26368 | 0.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -64 | Cycle | Base Deletion | 26368 | 0.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -65 | Cycle | Base Substitution | 26403 | 38.66 | 29.00 | 30.51 | -1.51 | Before |
| REGRESSION.HCC1395_tumor.L005 | -65 | Cycle | Base Insertion | 26345 | 0.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -65 | Cycle | Base Deletion | 26345 | 0.85 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -66 | Cycle | Base Substitution | 26401 | 50.53 | 29.00 | 30.44 | -1.44 | Before |
| REGRESSION.HCC1395_tumor.L005 | -66 | Cycle | Base Insertion | 26325 | 0.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -66 | Cycle | Base Deletion | 26325 | 0.90 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -67 | Cycle | Base Substitution | 26481 | 40.30 | 29.00 | 30.54 | -1.54 | Before |
| REGRESSION.HCC1395_tumor.L005 | -67 | Cycle | Base Insertion | 26413 | 0.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -67 | Cycle | Base Deletion | 26413 | 0.93 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -68 | Cycle | Base Substitution | 26441 | 38.20 | 29.00 | 30.62 | -1.62 | Before |
| REGRESSION.HCC1395_tumor.L005 | -68 | Cycle | Base Insertion | 26352 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -68 | Cycle | Base Deletion | 26352 | 1.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -69 | Cycle | Base Substitution | 26311 | 38.93 | 30.00 | 31.12 | -1.12 | Before |
| REGRESSION.HCC1395_tumor.L005 | -69 | Cycle | Base Insertion | 26227 | 0.88 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -69 | Cycle | Base Deletion | 26227 | 1.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -7 | Cycle | Base Substitution | 27215 | 49.63 | 29.00 | 30.60 | -1.60 | Before |
| REGRESSION.HCC1395_tumor.L005 | -7 | Cycle | Base Insertion | 27215 | 0.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -7 | Cycle | Base Deletion | 27215 | 0.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -70 | Cycle | Base Substitution | 26369 | 47.77 | 29.00 | 30.38 | -1.38 | Before |
| REGRESSION.HCC1395_tumor.L005 | -70 | Cycle | Base Insertion | 26270 | 0.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -70 | Cycle | Base Deletion | 26270 | 1.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -71 | Cycle | Base Substitution | 26243 | 49.24 | 29.00 | 30.28 | -1.28 | Before |
| REGRESSION.HCC1395_tumor.L005 | -71 | Cycle | Base Insertion | 26139 | 0.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -71 | Cycle | Base Deletion | 26139 | 1.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -72 | Cycle | Base Substitution | 26229 | 42.06 | 29.00 | 30.72 | -1.72 | Before |
| REGRESSION.HCC1395_tumor.L005 | -72 | Cycle | Base Insertion | 26112 | 0.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -72 | Cycle | Base Deletion | 26112 | 0.83 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -73 | Cycle | Base Substitution | 26161 | 33.60 | 30.00 | 30.67 | -0.67 | Before |
| REGRESSION.HCC1395_tumor.L005 | -73 | Cycle | Base Insertion | 26044 | 0.82 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -73 | Cycle | Base Deletion | 26044 | 1.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -74 | Cycle | Base Substitution | 26203 | 47.77 | 29.00 | 30.76 | -1.76 | Before |
| REGRESSION.HCC1395_tumor.L005 | -74 | Cycle | Base Insertion | 26074 | 0.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -74 | Cycle | Base Deletion | 26074 | 1.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -75 | Cycle | Base Substitution | 26100 | 41.72 | 29.00 | 30.63 | -1.63 | Before |
| REGRESSION.HCC1395_tumor.L005 | -75 | Cycle | Base Insertion | 25979 | 1.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -75 | Cycle | Base Deletion | 25979 | 1.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -76 | Cycle | Base Substitution | 26022 | 45.27 | 29.00 | 30.35 | -1.35 | Before |
| REGRESSION.HCC1395_tumor.L005 | -76 | Cycle | Base Insertion | 25899 | 1.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -76 | Cycle | Base Deletion | 25899 | 1.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -77 | Cycle | Base Substitution | 26029 | 30.66 | 30.00 | 30.56 | -0.56 | Before |
| REGRESSION.HCC1395_tumor.L005 | -77 | Cycle | Base Insertion | 25899 | 0.77 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -77 | Cycle | Base Deletion | 25899 | 1.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -78 | Cycle | Base Substitution | 26152 | 44.40 | 29.00 | 30.21 | -1.21 | Before |
| REGRESSION.HCC1395_tumor.L005 | -78 | Cycle | Base Insertion | 26016 | 0.62 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -78 | Cycle | Base Deletion | 26016 | 1.82 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -79 | Cycle | Base Substitution | 26159 | 44.81 | 29.00 | 30.14 | -1.14 | Before |
| REGRESSION.HCC1395_tumor.L005 | -79 | Cycle | Base Insertion | 26003 | 0.75 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -79 | Cycle | Base Deletion | 26003 | 1.90 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -8 | Cycle | Base Substitution | 27087 | 42.08 | 29.00 | 30.79 | -1.79 | Before |
| REGRESSION.HCC1395_tumor.L005 | -8 | Cycle | Base Insertion | 27087 | 0.62 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -8 | Cycle | Base Deletion | 27087 | 0.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -80 | Cycle | Base Substitution | 25968 | 40.47 | 29.00 | 30.52 | -1.52 | Before |
| REGRESSION.HCC1395_tumor.L005 | -80 | Cycle | Base Insertion | 25808 | 0.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -80 | Cycle | Base Deletion | 25808 | 2.02 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -81 | Cycle | Base Substitution | 25905 | 38.16 | 29.00 | 30.43 | -1.43 | Before |
| REGRESSION.HCC1395_tumor.L005 | -81 | Cycle | Base Insertion | 25747 | 0.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -81 | Cycle | Base Deletion | 25747 | 1.82 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -82 | Cycle | Base Substitution | 25847 | 52.72 | 29.00 | 30.39 | -1.39 | Before |
| REGRESSION.HCC1395_tumor.L005 | -82 | Cycle | Base Insertion | 25671 | 0.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -82 | Cycle | Base Deletion | 25671 | 1.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -83 | Cycle | Base Substitution | 25829 | 51.01 | 29.00 | 30.21 | -1.21 | Before |
| REGRESSION.HCC1395_tumor.L005 | -83 | Cycle | Base Insertion | 25646 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -83 | Cycle | Base Deletion | 25646 | 1.83 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -84 | Cycle | Base Substitution | 25666 | 40.96 | 29.00 | 30.27 | -1.27 | Before |
| REGRESSION.HCC1395_tumor.L005 | -84 | Cycle | Base Insertion | 25485 | 0.87 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -84 | Cycle | Base Deletion | 25485 | 1.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -85 | Cycle | Base Substitution | 25653 | 48.09 | 29.00 | 30.45 | -1.45 | Before |
| REGRESSION.HCC1395_tumor.L005 | -85 | Cycle | Base Insertion | 25454 | 0.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -85 | Cycle | Base Deletion | 25454 | 1.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -86 | Cycle | Base Substitution | 25835 | 42.72 | 29.00 | 30.40 | -1.40 | Before |
| REGRESSION.HCC1395_tumor.L005 | -86 | Cycle | Base Insertion | 25636 | 1.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -86 | Cycle | Base Deletion | 25636 | 1.07 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -87 | Cycle | Base Substitution | 25726 | 51.13 | 29.00 | 30.09 | -1.09 | Before |
| REGRESSION.HCC1395_tumor.L005 | -87 | Cycle | Base Insertion | 25534 | 0.81 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -87 | Cycle | Base Deletion | 25534 | 0.84 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -88 | Cycle | Base Substitution | 25550 | 41.16 | 29.00 | 30.24 | -1.24 | Before |
| REGRESSION.HCC1395_tumor.L005 | -88 | Cycle | Base Insertion | 25345 | 1.07 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -88 | Cycle | Base Deletion | 25345 | 0.62 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -89 | Cycle | Base Substitution | 25542 | 48.19 | 28.00 | 29.83 | -1.83 | Before |
| REGRESSION.HCC1395_tumor.L005 | -89 | Cycle | Base Insertion | 25335 | 1.12 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -89 | Cycle | Base Deletion | 25335 | 0.83 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -9 | Cycle | Base Substitution | 27015 | 43.56 | 29.00 | 30.99 | -1.99 | Before |
| REGRESSION.HCC1395_tumor.L005 | -9 | Cycle | Base Insertion | 27015 | 0.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -9 | Cycle | Base Deletion | 27015 | 0.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -90 | Cycle | Base Substitution | 25475 | 44.69 | 29.00 | 30.24 | -1.24 | Before |
| REGRESSION.HCC1395_tumor.L005 | -90 | Cycle | Base Insertion | 25254 | 1.09 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -90 | Cycle | Base Deletion | 25254 | 0.88 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -91 | Cycle | Base Substitution | 25394 | 53.41 | 28.00 | 29.86 | -1.86 | Before |
| REGRESSION.HCC1395_tumor.L005 | -91 | Cycle | Base Insertion | 25154 | 0.79 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -91 | Cycle | Base Deletion | 25154 | 1.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -92 | Cycle | Base Substitution | 25414 | 38.45 | 29.00 | 30.03 | -1.03 | Before |
| REGRESSION.HCC1395_tumor.L005 | -92 | Cycle | Base Insertion | 25183 | 0.76 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -92 | Cycle | Base Deletion | 25183 | 0.79 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -93 | Cycle | Base Substitution | 25362 | 45.11 | 29.00 | 30.10 | -1.10 | Before |
| REGRESSION.HCC1395_tumor.L005 | -93 | Cycle | Base Insertion | 25124 | 0.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -93 | Cycle | Base Deletion | 25124 | 1.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -94 | Cycle | Base Substitution | 25266 | 59.68 | 28.00 | 29.74 | -1.74 | Before |
| REGRESSION.HCC1395_tumor.L005 | -94 | Cycle | Base Insertion | 25002 | 0.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -94 | Cycle | Base Deletion | 25002 | 1.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -95 | Cycle | Base Substitution | 25089 | 43.75 | 29.00 | 30.29 | -1.29 | Before |
| REGRESSION.HCC1395_tumor.L005 | -95 | Cycle | Base Insertion | 24845 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -95 | Cycle | Base Deletion | 24845 | 1.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -96 | Cycle | Base Substitution | 25016 | 47.98 | 29.00 | 30.05 | -1.05 | Before |
| REGRESSION.HCC1395_tumor.L005 | -96 | Cycle | Base Insertion | 24760 | 0.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -96 | Cycle | Base Deletion | 24760 | 1.83 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -97 | Cycle | Base Substitution | 25040 | 49.22 | 29.00 | 30.28 | -1.28 | Before |
| REGRESSION.HCC1395_tumor.L005 | -97 | Cycle | Base Insertion | 24772 | 0.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -97 | Cycle | Base Deletion | 24772 | 1.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -98 | Cycle | Base Substitution | 24840 | 44.69 | 29.00 | 30.28 | -1.28 | Before |
| REGRESSION.HCC1395_tumor.L005 | -98 | Cycle | Base Insertion | 24578 | 0.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -98 | Cycle | Base Deletion | 24578 | 1.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -99 | Cycle | Base Substitution | 24922 | 45.32 | 29.00 | 30.13 | -1.13 | Before |
| REGRESSION.HCC1395_tumor.L005 | -99 | Cycle | Base Insertion | 24650 | 0.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | -99 | Cycle | Base Deletion | 24650 | 0.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 1 | Cycle | Base Substitution | 26839 | 64.88 | 27.00 | 28.77 | -1.77 | Before |
| REGRESSION.HCC1395_tumor.L005 | 10 | Cycle | Base Substitution | 27151 | 28.25 | 31.00 | 31.31 | -0.31 | Before |
| REGRESSION.HCC1395_tumor.L005 | 10 | Cycle | Base Insertion | 27151 | 0.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 10 | Cycle | Base Deletion | 27151 | 1.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 100 | Cycle | Base Substitution | 25021 | 45.35 | 29.00 | 30.38 | -1.38 | Before |
| REGRESSION.HCC1395_tumor.L005 | 100 | Cycle | Base Insertion | 24764 | 0.98 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 100 | Cycle | Base Deletion | 24764 | 0.88 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 101 | Cycle | Base Substitution | 24937 | 46.42 | 29.00 | 30.39 | -1.39 | Before |
| REGRESSION.HCC1395_tumor.L005 | 101 | Cycle | Base Insertion | 24675 | 0.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 101 | Cycle | Base Deletion | 24675 | 1.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 102 | Cycle | Base Substitution | 24881 | 35.10 | 30.00 | 30.48 | -0.48 | Before |
| REGRESSION.HCC1395_tumor.L005 | 102 | Cycle | Base Insertion | 24614 | 0.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 102 | Cycle | Base Deletion | 24614 | 1.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 103 | Cycle | Base Substitution | 24760 | 43.10 | 29.00 | 30.48 | -1.48 | Before |
| REGRESSION.HCC1395_tumor.L005 | 103 | Cycle | Base Insertion | 24498 | 0.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 103 | Cycle | Base Deletion | 24498 | 1.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 104 | Cycle | Base Substitution | 24661 | 33.78 | 30.00 | 30.68 | -0.68 | Before |
| REGRESSION.HCC1395_tumor.L005 | 104 | Cycle | Base Insertion | 24405 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 104 | Cycle | Base Deletion | 24405 | 1.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 105 | Cycle | Base Substitution | 24558 | 30.88 | 30.00 | 30.62 | -0.62 | Before |
| REGRESSION.HCC1395_tumor.L005 | 105 | Cycle | Base Insertion | 24304 | 0.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 105 | Cycle | Base Deletion | 24304 | 0.94 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 106 | Cycle | Base Substitution | 24603 | 41.93 | 29.00 | 30.29 | -1.29 | Before |
| REGRESSION.HCC1395_tumor.L005 | 106 | Cycle | Base Insertion | 24344 | 0.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 106 | Cycle | Base Deletion | 24344 | 0.81 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 107 | Cycle | Base Substitution | 24596 | 34.72 | 30.00 | 30.35 | -0.35 | Before |
| REGRESSION.HCC1395_tumor.L005 | 107 | Cycle | Base Insertion | 24355 | 0.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 107 | Cycle | Base Deletion | 24355 | 0.79 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 108 | Cycle | Base Substitution | 24518 | 46.68 | 29.00 | 30.18 | -1.18 | Before |
| REGRESSION.HCC1395_tumor.L005 | 108 | Cycle | Base Insertion | 24250 | 0.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 108 | Cycle | Base Deletion | 24250 | 0.76 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 109 | Cycle | Base Substitution | 24484 | 45.31 | 29.00 | 30.26 | -1.26 | Before |
| REGRESSION.HCC1395_tumor.L005 | 109 | Cycle | Base Insertion | 24220 | 0.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 109 | Cycle | Base Deletion | 24220 | 0.69 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 11 | Cycle | Base Substitution | 27104 | 38.45 | 30.00 | 31.27 | -1.27 | Before |
| REGRESSION.HCC1395_tumor.L005 | 11 | Cycle | Base Insertion | 27104 | 0.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 11 | Cycle | Base Deletion | 27104 | 1.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 110 | Cycle | Base Substitution | 24332 | 47.81 | 29.00 | 30.31 | -1.31 | Before |
| REGRESSION.HCC1395_tumor.L005 | 110 | Cycle | Base Insertion | 24060 | 0.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 110 | Cycle | Base Deletion | 24060 | 0.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 111 | Cycle | Base Substitution | 24259 | 43.43 | 29.00 | 30.08 | -1.08 | Before |
| REGRESSION.HCC1395_tumor.L005 | 111 | Cycle | Base Insertion | 23976 | 0.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 111 | Cycle | Base Deletion | 23976 | 0.97 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 112 | Cycle | Base Substitution | 24124 | 45.09 | 29.00 | 30.30 | -1.30 | Before |
| REGRESSION.HCC1395_tumor.L005 | 112 | Cycle | Base Insertion | 23829 | 0.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 112 | Cycle | Base Deletion | 23829 | 1.02 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 113 | Cycle | Base Substitution | 24146 | 43.96 | 28.00 | 30.00 | -2.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 113 | Cycle | Base Insertion | 23854 | 0.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 113 | Cycle | Base Deletion | 23854 | 1.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 114 | Cycle | Base Substitution | 24088 | 45.77 | 29.00 | 30.27 | -1.27 | Before |
| REGRESSION.HCC1395_tumor.L005 | 114 | Cycle | Base Insertion | 23803 | 0.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 114 | Cycle | Base Deletion | 23803 | 1.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 115 | Cycle | Base Substitution | 24066 | 34.39 | 30.00 | 30.46 | -0.46 | Before |
| REGRESSION.HCC1395_tumor.L005 | 115 | Cycle | Base Insertion | 23782 | 0.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 115 | Cycle | Base Deletion | 23782 | 0.93 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 116 | Cycle | Base Substitution | 23919 | 49.79 | 29.00 | 30.03 | -1.03 | Before |
| REGRESSION.HCC1395_tumor.L005 | 116 | Cycle | Base Insertion | 23643 | 0.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 116 | Cycle | Base Deletion | 23643 | 1.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 117 | Cycle | Base Substitution | 23857 | 45.78 | 29.00 | 30.18 | -1.18 | Before |
| REGRESSION.HCC1395_tumor.L005 | 117 | Cycle | Base Insertion | 23578 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 117 | Cycle | Base Deletion | 23578 | 1.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 118 | Cycle | Base Substitution | 23757 | 40.27 | 29.00 | 30.22 | -1.22 | Before |
| REGRESSION.HCC1395_tumor.L005 | 118 | Cycle | Base Insertion | 23461 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 118 | Cycle | Base Deletion | 23461 | 1.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 119 | Cycle | Base Substitution | 23748 | 62.16 | 28.00 | 30.06 | -2.06 | Before |
| REGRESSION.HCC1395_tumor.L005 | 119 | Cycle | Base Insertion | 23477 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 119 | Cycle | Base Deletion | 23477 | 1.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 12 | Cycle | Base Substitution | 27018 | 37.57 | 30.00 | 31.14 | -1.14 | Before |
| REGRESSION.HCC1395_tumor.L005 | 12 | Cycle | Base Insertion | 27018 | 0.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 12 | Cycle | Base Deletion | 27018 | 2.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 120 | Cycle | Base Substitution | 23654 | 46.97 | 28.00 | 29.80 | -1.80 | Before |
| REGRESSION.HCC1395_tumor.L005 | 120 | Cycle | Base Insertion | 23392 | 0.60 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 120 | Cycle | Base Deletion | 23392 | 1.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 121 | Cycle | Base Substitution | 23680 | 41.50 | 29.00 | 30.37 | -1.37 | Before |
| REGRESSION.HCC1395_tumor.L005 | 121 | Cycle | Base Insertion | 23398 | 0.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 121 | Cycle | Base Deletion | 23398 | 1.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 122 | Cycle | Base Substitution | 23576 | 48.65 | 29.00 | 30.06 | -1.06 | Before |
| REGRESSION.HCC1395_tumor.L005 | 122 | Cycle | Base Insertion | 23296 | 0.66 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 122 | Cycle | Base Deletion | 23296 | 1.02 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 123 | Cycle | Base Substitution | 23464 | 43.81 | 29.00 | 30.17 | -1.17 | Before |
| REGRESSION.HCC1395_tumor.L005 | 123 | Cycle | Base Insertion | 23150 | 0.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 123 | Cycle | Base Deletion | 23150 | 0.79 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 124 | Cycle | Base Substitution | 23468 | 50.74 | 29.00 | 30.05 | -1.05 | Before |
| REGRESSION.HCC1395_tumor.L005 | 124 | Cycle | Base Insertion | 23157 | 0.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 124 | Cycle | Base Deletion | 23157 | 0.62 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 125 | Cycle | Base Substitution | 23361 | 34.30 | 29.00 | 30.43 | -1.43 | Before |
| REGRESSION.HCC1395_tumor.L005 | 125 | Cycle | Base Insertion | 23059 | 0.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 125 | Cycle | Base Deletion | 23059 | 0.76 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 126 | Cycle | Base Substitution | 23329 | 46.40 | 29.00 | 30.09 | -1.09 | Before |
| REGRESSION.HCC1395_tumor.L005 | 126 | Cycle | Base Insertion | 23022 | 1.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 126 | Cycle | Base Deletion | 23022 | 0.67 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 127 | Cycle | Base Substitution | 23310 | 46.99 | 29.00 | 30.15 | -1.15 | Before |
| REGRESSION.HCC1395_tumor.L005 | 127 | Cycle | Base Insertion | 22993 | 0.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 127 | Cycle | Base Deletion | 22993 | 1.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 128 | Cycle | Base Substitution | 23211 | 43.18 | 29.00 | 30.04 | -1.04 | Before |
| REGRESSION.HCC1395_tumor.L005 | 128 | Cycle | Base Insertion | 22906 | 0.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 128 | Cycle | Base Deletion | 22906 | 1.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 129 | Cycle | Base Substitution | 23166 | 52.43 | 29.00 | 30.06 | -1.06 | Before |
| REGRESSION.HCC1395_tumor.L005 | 129 | Cycle | Base Insertion | 22840 | 0.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 129 | Cycle | Base Deletion | 22840 | 1.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 13 | Cycle | Base Substitution | 26960 | 35.34 | 30.00 | 31.09 | -1.09 | Before |
| REGRESSION.HCC1395_tumor.L005 | 13 | Cycle | Base Insertion | 26960 | 0.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 13 | Cycle | Base Deletion | 26960 | 2.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 130 | Cycle | Base Substitution | 22978 | 40.66 | 28.00 | 29.98 | -1.98 | Before |
| REGRESSION.HCC1395_tumor.L005 | 130 | Cycle | Base Insertion | 22670 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 130 | Cycle | Base Deletion | 22670 | 0.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 131 | Cycle | Base Substitution | 22903 | 38.55 | 29.00 | 30.01 | -1.01 | Before |
| REGRESSION.HCC1395_tumor.L005 | 131 | Cycle | Base Insertion | 22598 | 0.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 131 | Cycle | Base Deletion | 22598 | 0.65 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 132 | Cycle | Base Substitution | 22934 | 43.88 | 28.00 | 29.93 | -1.93 | Before |
| REGRESSION.HCC1395_tumor.L005 | 132 | Cycle | Base Insertion | 22627 | 0.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 132 | Cycle | Base Deletion | 22627 | 0.65 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 133 | Cycle | Base Substitution | 22809 | 36.57 | 29.00 | 30.13 | -1.13 | Before |
| REGRESSION.HCC1395_tumor.L005 | 133 | Cycle | Base Insertion | 22501 | 0.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 133 | Cycle | Base Deletion | 22501 | 0.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 134 | Cycle | Base Substitution | 22735 | 44.52 | 29.00 | 30.40 | -1.40 | Before |
| REGRESSION.HCC1395_tumor.L005 | 134 | Cycle | Base Insertion | 22411 | 0.04 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 134 | Cycle | Base Deletion | 22411 | 0.89 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 135 | Cycle | Base Substitution | 22773 | 39.45 | 29.00 | 29.86 | -0.86 | Before |
| REGRESSION.HCC1395_tumor.L005 | 135 | Cycle | Base Insertion | 22446 | 0.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 135 | Cycle | Base Deletion | 22446 | 1.12 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 136 | Cycle | Base Substitution | 22659 | 38.75 | 29.00 | 30.23 | -1.23 | Before |
| REGRESSION.HCC1395_tumor.L005 | 136 | Cycle | Base Insertion | 22320 | 0.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 136 | Cycle | Base Deletion | 22320 | 0.95 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 137 | Cycle | Base Substitution | 22575 | 39.49 | 29.00 | 30.02 | -1.02 | Before |
| REGRESSION.HCC1395_tumor.L005 | 137 | Cycle | Base Insertion | 22238 | 0.09 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 137 | Cycle | Base Deletion | 22238 | 0.93 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 138 | Cycle | Base Substitution | 22509 | 41.36 | 29.00 | 30.10 | -1.10 | Before |
| REGRESSION.HCC1395_tumor.L005 | 138 | Cycle | Base Insertion | 22178 | 0.04 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 138 | Cycle | Base Deletion | 22178 | 0.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 139 | Cycle | Base Substitution | 22501 | 49.70 | 29.00 | 30.19 | -1.19 | Before |
| REGRESSION.HCC1395_tumor.L005 | 139 | Cycle | Base Insertion | 22159 | 0.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 139 | Cycle | Base Deletion | 22159 | 0.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 14 | Cycle | Base Substitution | 27103 | 35.45 | 30.00 | 31.25 | -1.25 | Before |
| REGRESSION.HCC1395_tumor.L005 | 14 | Cycle | Base Insertion | 27103 | 0.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 14 | Cycle | Base Deletion | 27103 | 1.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 140 | Cycle | Base Substitution | 22342 | 46.79 | 28.00 | 29.92 | -1.92 | Before |
| REGRESSION.HCC1395_tumor.L005 | 140 | Cycle | Base Insertion | 22014 | 0.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 140 | Cycle | Base Deletion | 22014 | 0.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 141 | Cycle | Base Substitution | 22227 | 53.88 | 28.00 | 29.77 | -1.77 | Before |
| REGRESSION.HCC1395_tumor.L005 | 141 | Cycle | Base Insertion | 21893 | 0.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 141 | Cycle | Base Deletion | 21893 | 0.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 142 | Cycle | Base Substitution | 22155 | 48.41 | 28.00 | 29.95 | -1.95 | Before |
| REGRESSION.HCC1395_tumor.L005 | 142 | Cycle | Base Insertion | 21812 | 0.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 142 | Cycle | Base Deletion | 21812 | 0.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 143 | Cycle | Base Substitution | 22113 | 38.58 | 28.00 | 29.93 | -1.93 | Before |
| REGRESSION.HCC1395_tumor.L005 | 143 | Cycle | Base Insertion | 21771 | 0.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 143 | Cycle | Base Deletion | 21771 | 0.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 144 | Cycle | Base Substitution | 21988 | 46.98 | 28.00 | 29.68 | -1.68 | Before |
| REGRESSION.HCC1395_tumor.L005 | 144 | Cycle | Base Insertion | 21634 | 0.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 144 | Cycle | Base Deletion | 21634 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 145 | Cycle | Base Substitution | 21929 | 49.74 | 28.00 | 29.85 | -1.85 | Before |
| REGRESSION.HCC1395_tumor.L005 | 145 | Cycle | Base Insertion | 21570 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 145 | Cycle | Base Deletion | 21570 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 146 | Cycle | Base Substitution | 21865 | 45.36 | 29.00 | 30.38 | -1.38 | Before |
| REGRESSION.HCC1395_tumor.L005 | 146 | Cycle | Base Insertion | 21524 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 146 | Cycle | Base Deletion | 21524 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 147 | Cycle | Base Substitution | 21761 | 51.56 | 29.00 | 30.40 | -1.40 | Before |
| REGRESSION.HCC1395_tumor.L005 | 148 | Cycle | Base Substitution | 21663 | 35.42 | 29.00 | 29.62 | -0.62 | Before |
| REGRESSION.HCC1395_tumor.L005 | 149 | Cycle | Base Substitution | 21613 | 43.08 | 28.00 | 29.61 | -1.61 | Before |
| REGRESSION.HCC1395_tumor.L005 | 15 | Cycle | Base Substitution | 27004 | 36.45 | 30.00 | 31.25 | -1.25 | Before |
| REGRESSION.HCC1395_tumor.L005 | 15 | Cycle | Base Insertion | 27004 | 0.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 15 | Cycle | Base Deletion | 27004 | 1.96 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 150 | Cycle | Base Substitution | 21542 | 38.85 | 28.00 | 29.88 | -1.88 | Before |
| REGRESSION.HCC1395_tumor.L005 | 16 | Cycle | Base Substitution | 27001 | 22.51 | 32.00 | 33.02 | -1.02 | Before |
| REGRESSION.HCC1395_tumor.L005 | 16 | Cycle | Base Insertion | 27001 | 0.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 16 | Cycle | Base Deletion | 27001 | 1.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 17 | Cycle | Base Substitution | 27085 | 21.24 | 33.00 | 33.16 | -0.16 | Before |
| REGRESSION.HCC1395_tumor.L005 | 17 | Cycle | Base Insertion | 27085 | 0.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 17 | Cycle | Base Deletion | 27085 | 1.99 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 18 | Cycle | Base Substitution | 27003 | 26.75 | 31.00 | 32.85 | -1.85 | Before |
| REGRESSION.HCC1395_tumor.L005 | 18 | Cycle | Base Insertion | 27003 | 0.57 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 18 | Cycle | Base Deletion | 27003 | 2.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 19 | Cycle | Base Substitution | 27078 | 19.87 | 32.00 | 32.70 | -0.70 | Before |
| REGRESSION.HCC1395_tumor.L005 | 19 | Cycle | Base Insertion | 27078 | 0.57 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 19 | Cycle | Base Deletion | 27078 | 2.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 2 | Cycle | Base Substitution | 27222 | 58.16 | 28.00 | 29.78 | -1.78 | Before |
| REGRESSION.HCC1395_tumor.L005 | 20 | Cycle | Base Substitution | 27026 | 23.04 | 32.00 | 32.82 | -0.82 | Before |
| REGRESSION.HCC1395_tumor.L005 | 20 | Cycle | Base Insertion | 27026 | 0.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 20 | Cycle | Base Deletion | 27026 | 1.76 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 21 | Cycle | Base Substitution | 26948 | 30.06 | 32.00 | 33.10 | -1.10 | Before |
| REGRESSION.HCC1395_tumor.L005 | 21 | Cycle | Base Insertion | 26948 | 0.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 21 | Cycle | Base Deletion | 26948 | 1.91 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 22 | Cycle | Base Substitution | 26973 | 17.00 | 33.00 | 33.08 | -0.08 | Before |
| REGRESSION.HCC1395_tumor.L005 | 22 | Cycle | Base Insertion | 26973 | 0.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 22 | Cycle | Base Deletion | 26973 | 1.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 23 | Cycle | Base Substitution | 26965 | 29.51 | 32.00 | 33.16 | -1.16 | Before |
| REGRESSION.HCC1395_tumor.L005 | 23 | Cycle | Base Insertion | 26965 | 0.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 23 | Cycle | Base Deletion | 26965 | 2.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 24 | Cycle | Base Substitution | 26908 | 27.23 | 32.00 | 33.03 | -1.03 | Before |
| REGRESSION.HCC1395_tumor.L005 | 24 | Cycle | Base Insertion | 26908 | 0.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 24 | Cycle | Base Deletion | 26908 | 1.99 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 25 | Cycle | Base Substitution | 26969 | 18.30 | 33.00 | 33.14 | -0.14 | Before |
| REGRESSION.HCC1395_tumor.L005 | 25 | Cycle | Base Insertion | 26969 | 0.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 25 | Cycle | Base Deletion | 26969 | 2.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 26 | Cycle | Base Substitution | 26974 | 26.42 | 31.00 | 31.59 | -0.59 | Before |
| REGRESSION.HCC1395_tumor.L005 | 26 | Cycle | Base Insertion | 26974 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 26 | Cycle | Base Deletion | 26974 | 1.69 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 27 | Cycle | Base Substitution | 26826 | 29.11 | 31.00 | 31.31 | -0.31 | Before |
| REGRESSION.HCC1395_tumor.L005 | 27 | Cycle | Base Insertion | 26826 | 0.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 27 | Cycle | Base Deletion | 26826 | 1.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 28 | Cycle | Base Substitution | 26888 | 32.10 | 30.00 | 31.20 | -1.20 | Before |
| REGRESSION.HCC1395_tumor.L005 | 28 | Cycle | Base Insertion | 26888 | 0.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 28 | Cycle | Base Deletion | 26888 | 1.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 29 | Cycle | Base Substitution | 26857 | 27.90 | 31.00 | 31.91 | -0.91 | Before |
| REGRESSION.HCC1395_tumor.L005 | 29 | Cycle | Base Insertion | 26857 | 0.77 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 29 | Cycle | Base Deletion | 26857 | 0.94 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 3 | Cycle | Base Substitution | 27282 | 61.68 | 29.00 | 31.09 | -2.09 | Before |
| REGRESSION.HCC1395_tumor.L005 | 30 | Cycle | Base Substitution | 26848 | 34.46 | 30.00 | 31.74 | -1.74 | Before |
| REGRESSION.HCC1395_tumor.L005 | 30 | Cycle | Base Insertion | 26848 | 0.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 30 | Cycle | Base Deletion | 26848 | 0.77 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 31 | Cycle | Base Substitution | 26934 | 33.92 | 30.00 | 31.43 | -1.43 | Before |
| REGRESSION.HCC1395_tumor.L005 | 31 | Cycle | Base Insertion | 26934 | 0.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 31 | Cycle | Base Deletion | 26934 | 0.80 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 32 | Cycle | Base Substitution | 26789 | 42.22 | 30.00 | 31.57 | -1.57 | Before |
| REGRESSION.HCC1395_tumor.L005 | 32 | Cycle | Base Insertion | 26789 | 1.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 32 | Cycle | Base Deletion | 26789 | 0.92 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 33 | Cycle | Base Substitution | 26776 | 30.36 | 31.00 | 31.80 | -0.80 | Before |
| REGRESSION.HCC1395_tumor.L005 | 33 | Cycle | Base Insertion | 26776 | 1.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 33 | Cycle | Base Deletion | 26776 | 0.62 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 34 | Cycle | Base Substitution | 26799 | 31.25 | 31.00 | 31.38 | -0.38 | Before |
| REGRESSION.HCC1395_tumor.L005 | 34 | Cycle | Base Insertion | 26799 | 1.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 34 | Cycle | Base Deletion | 26799 | 0.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 35 | Cycle | Base Substitution | 26890 | 24.28 | 31.00 | 31.49 | -0.49 | Before |
| REGRESSION.HCC1395_tumor.L005 | 35 | Cycle | Base Insertion | 26890 | 0.66 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 35 | Cycle | Base Deletion | 26890 | 1.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 36 | Cycle | Base Substitution | 26905 | 42.27 | 30.00 | 31.19 | -1.19 | Before |
| REGRESSION.HCC1395_tumor.L005 | 36 | Cycle | Base Insertion | 26904 | 0.85 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 36 | Cycle | Base Deletion | 26904 | 1.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 37 | Cycle | Base Substitution | 26833 | 29.80 | 31.00 | 32.02 | -1.02 | Before |
| REGRESSION.HCC1395_tumor.L005 | 37 | Cycle | Base Insertion | 26833 | 0.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 37 | Cycle | Base Deletion | 26833 | 1.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 38 | Cycle | Base Substitution | 26693 | 39.94 | 30.00 | 31.55 | -1.55 | Before |
| REGRESSION.HCC1395_tumor.L005 | 38 | Cycle | Base Insertion | 26692 | 1.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 38 | Cycle | Base Deletion | 26692 | 1.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 39 | Cycle | Base Substitution | 26706 | 26.68 | 31.00 | 31.91 | -0.91 | Before |
| REGRESSION.HCC1395_tumor.L005 | 39 | Cycle | Base Insertion | 26706 | 0.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 39 | Cycle | Base Deletion | 26706 | 1.60 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 4 | Cycle | Base Substitution | 27177 | 57.20 | 29.00 | 30.78 | -1.78 | Before |
| REGRESSION.HCC1395_tumor.L005 | 40 | Cycle | Base Substitution | 26769 | 27.31 | 31.00 | 31.75 | -0.75 | Before |
| REGRESSION.HCC1395_tumor.L005 | 40 | Cycle | Base Insertion | 26768 | 0.79 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 40 | Cycle | Base Deletion | 26768 | 1.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 41 | Cycle | Base Substitution | 26713 | 27.32 | 31.00 | 31.67 | -0.67 | Before |
| REGRESSION.HCC1395_tumor.L005 | 41 | Cycle | Base Insertion | 26711 | 0.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 41 | Cycle | Base Deletion | 26711 | 1.74 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 42 | Cycle | Base Substitution | 26714 | 30.55 | 31.00 | 31.84 | -0.84 | Before |
| REGRESSION.HCC1395_tumor.L005 | 42 | Cycle | Base Insertion | 26709 | 0.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 42 | Cycle | Base Deletion | 26709 | 1.75 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 43 | Cycle | Base Substitution | 26837 | 32.09 | 30.00 | 31.61 | -1.61 | Before |
| REGRESSION.HCC1395_tumor.L005 | 43 | Cycle | Base Insertion | 26832 | 0.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 43 | Cycle | Base Deletion | 26832 | 1.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 44 | Cycle | Base Substitution | 26726 | 38.61 | 30.00 | 31.64 | -1.64 | Before |
| REGRESSION.HCC1395_tumor.L005 | 44 | Cycle | Base Insertion | 26722 | 0.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 44 | Cycle | Base Deletion | 26722 | 1.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 45 | Cycle | Base Substitution | 26653 | 35.20 | 30.00 | 31.89 | -1.89 | Before |
| REGRESSION.HCC1395_tumor.L005 | 45 | Cycle | Base Insertion | 26647 | 0.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 45 | Cycle | Base Deletion | 26647 | 1.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 46 | Cycle | Base Substitution | 26725 | 21.57 | 31.00 | 31.83 | -0.83 | Before |
| REGRESSION.HCC1395_tumor.L005 | 46 | Cycle | Base Insertion | 26720 | 0.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 46 | Cycle | Base Deletion | 26720 | 1.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 47 | Cycle | Base Substitution | 26678 | 28.59 | 31.00 | 31.66 | -0.66 | Before |
| REGRESSION.HCC1395_tumor.L005 | 47 | Cycle | Base Insertion | 26669 | 0.57 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 47 | Cycle | Base Deletion | 26669 | 1.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 48 | Cycle | Base Substitution | 26676 | 24.74 | 31.00 | 31.69 | -0.69 | Before |
| REGRESSION.HCC1395_tumor.L005 | 48 | Cycle | Base Insertion | 26663 | 0.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 48 | Cycle | Base Deletion | 26663 | 1.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 49 | Cycle | Base Substitution | 26624 | 32.27 | 30.00 | 31.36 | -1.36 | Before |
| REGRESSION.HCC1395_tumor.L005 | 49 | Cycle | Base Insertion | 26610 | 0.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 49 | Cycle | Base Deletion | 26610 | 1.02 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 5 | Cycle | Base Substitution | 27155 | 42.60 | 30.00 | 31.30 | -1.30 | Before |
| REGRESSION.HCC1395_tumor.L005 | 5 | Cycle | Base Insertion | 27155 | 0.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 5 | Cycle | Base Deletion | 27155 | 0.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 50 | Cycle | Base Substitution | 26702 | 34.81 | 30.00 | 31.07 | -1.07 | Before |
| REGRESSION.HCC1395_tumor.L005 | 50 | Cycle | Base Insertion | 26681 | 0.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 50 | Cycle | Base Deletion | 26681 | 1.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 51 | Cycle | Base Substitution | 26689 | 31.68 | 30.00 | 31.75 | -1.75 | Before |
| REGRESSION.HCC1395_tumor.L005 | 51 | Cycle | Base Insertion | 26666 | 0.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 51 | Cycle | Base Deletion | 26666 | 1.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 52 | Cycle | Base Substitution | 26707 | 33.27 | 30.00 | 31.60 | -1.60 | Before |
| REGRESSION.HCC1395_tumor.L005 | 52 | Cycle | Base Insertion | 26686 | 0.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 52 | Cycle | Base Deletion | 26686 | 1.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 53 | Cycle | Base Substitution | 26634 | 30.46 | 31.00 | 31.54 | -0.54 | Before |
| REGRESSION.HCC1395_tumor.L005 | 53 | Cycle | Base Insertion | 26605 | 0.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 53 | Cycle | Base Deletion | 26605 | 1.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 54 | Cycle | Base Substitution | 26560 | 32.29 | 30.00 | 31.60 | -1.60 | Before |
| REGRESSION.HCC1395_tumor.L005 | 54 | Cycle | Base Insertion | 26527 | 0.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 54 | Cycle | Base Deletion | 26527 | 1.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 55 | Cycle | Base Substitution | 26693 | 38.08 | 30.00 | 31.58 | -1.58 | Before |
| REGRESSION.HCC1395_tumor.L005 | 55 | Cycle | Base Insertion | 26658 | 0.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 55 | Cycle | Base Deletion | 26658 | 1.01 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 56 | Cycle | Base Substitution | 26535 | 31.44 | 31.00 | 31.72 | -0.72 | Before |
| REGRESSION.HCC1395_tumor.L005 | 56 | Cycle | Base Insertion | 26498 | 0.62 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 56 | Cycle | Base Deletion | 26498 | 1.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 57 | Cycle | Base Substitution | 26565 | 37.99 | 30.00 | 31.42 | -1.42 | Before |
| REGRESSION.HCC1395_tumor.L005 | 57 | Cycle | Base Insertion | 26534 | 1.01 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 57 | Cycle | Base Deletion | 26534 | 1.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 58 | Cycle | Base Substitution | 26574 | 36.46 | 30.00 | 31.50 | -1.50 | Before |
| REGRESSION.HCC1395_tumor.L005 | 58 | Cycle | Base Insertion | 26544 | 0.92 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 58 | Cycle | Base Deletion | 26544 | 1.12 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 59 | Cycle | Base Substitution | 26535 | 32.25 | 30.00 | 31.22 | -1.22 | Before |
| REGRESSION.HCC1395_tumor.L005 | 59 | Cycle | Base Insertion | 26497 | 0.98 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 59 | Cycle | Base Deletion | 26497 | 0.92 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 6 | Cycle | Base Substitution | 27112 | 32.00 | 30.00 | 31.20 | -1.20 | Before |
| REGRESSION.HCC1395_tumor.L005 | 6 | Cycle | Base Insertion | 27112 | 0.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 6 | Cycle | Base Deletion | 27112 | 0.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 60 | Cycle | Base Substitution | 26590 | 35.99 | 30.00 | 31.20 | -1.20 | Before |
| REGRESSION.HCC1395_tumor.L005 | 60 | Cycle | Base Insertion | 26547 | 0.57 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 60 | Cycle | Base Deletion | 26547 | 1.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 61 | Cycle | Base Substitution | 26479 | 28.66 | 31.00 | 31.28 | -0.28 | Before |
| REGRESSION.HCC1395_tumor.L005 | 61 | Cycle | Base Insertion | 26423 | 1.02 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 61 | Cycle | Base Deletion | 26423 | 1.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 62 | Cycle | Base Substitution | 26430 | 35.99 | 30.00 | 31.44 | -1.44 | Before |
| REGRESSION.HCC1395_tumor.L005 | 62 | Cycle | Base Insertion | 26371 | 0.82 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 62 | Cycle | Base Deletion | 26371 | 1.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 63 | Cycle | Base Substitution | 26502 | 44.47 | 30.00 | 31.29 | -1.29 | Before |
| REGRESSION.HCC1395_tumor.L005 | 63 | Cycle | Base Insertion | 26433 | 0.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 63 | Cycle | Base Deletion | 26433 | 1.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 64 | Cycle | Base Substitution | 26451 | 37.04 | 30.00 | 31.58 | -1.58 | Before |
| REGRESSION.HCC1395_tumor.L005 | 64 | Cycle | Base Insertion | 26389 | 0.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 64 | Cycle | Base Deletion | 26389 | 1.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 65 | Cycle | Base Substitution | 26427 | 35.71 | 30.00 | 31.33 | -1.33 | Before |
| REGRESSION.HCC1395_tumor.L005 | 65 | Cycle | Base Insertion | 26362 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 65 | Cycle | Base Deletion | 26362 | 1.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 66 | Cycle | Base Substitution | 26471 | 28.17 | 31.00 | 31.31 | -0.31 | Before |
| REGRESSION.HCC1395_tumor.L005 | 66 | Cycle | Base Insertion | 26402 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 66 | Cycle | Base Deletion | 26402 | 1.21 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 67 | Cycle | Base Substitution | 26404 | 37.00 | 30.00 | 31.63 | -1.63 | Before |
| REGRESSION.HCC1395_tumor.L005 | 67 | Cycle | Base Insertion | 26334 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 67 | Cycle | Base Deletion | 26334 | 1.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 68 | Cycle | Base Substitution | 26398 | 32.33 | 30.00 | 31.43 | -1.43 | Before |
| REGRESSION.HCC1395_tumor.L005 | 68 | Cycle | Base Insertion | 26321 | 0.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 68 | Cycle | Base Deletion | 26321 | 1.65 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 69 | Cycle | Base Substitution | 26359 | 25.30 | 31.00 | 31.23 | -0.23 | Before |
| REGRESSION.HCC1395_tumor.L005 | 69 | Cycle | Base Insertion | 26275 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 69 | Cycle | Base Deletion | 26275 | 1.97 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 7 | Cycle | Base Substitution | 27119 | 34.89 | 30.00 | 30.90 | -0.90 | Before |
| REGRESSION.HCC1395_tumor.L005 | 7 | Cycle | Base Insertion | 27119 | 0.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 7 | Cycle | Base Deletion | 27119 | 0.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 70 | Cycle | Base Substitution | 26308 | 31.05 | 31.00 | 31.22 | -0.22 | Before |
| REGRESSION.HCC1395_tumor.L005 | 70 | Cycle | Base Insertion | 26209 | 0.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 70 | Cycle | Base Deletion | 26209 | 1.52 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 71 | Cycle | Base Substitution | 26281 | 37.52 | 30.00 | 31.28 | -1.28 | Before |
| REGRESSION.HCC1395_tumor.L005 | 71 | Cycle | Base Insertion | 26176 | 0.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 71 | Cycle | Base Deletion | 26176 | 1.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 72 | Cycle | Base Substitution | 26198 | 37.21 | 30.00 | 31.18 | -1.18 | Before |
| REGRESSION.HCC1395_tumor.L005 | 72 | Cycle | Base Insertion | 26089 | 0.21 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 72 | Cycle | Base Deletion | 26089 | 1.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 73 | Cycle | Base Substitution | 26179 | 48.18 | 29.00 | 30.90 | -1.90 | Before |
| REGRESSION.HCC1395_tumor.L005 | 73 | Cycle | Base Insertion | 26054 | 0.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 73 | Cycle | Base Deletion | 26054 | 1.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 74 | Cycle | Base Substitution | 26296 | 36.71 | 30.00 | 31.07 | -1.07 | Before |
| REGRESSION.HCC1395_tumor.L005 | 74 | Cycle | Base Insertion | 26171 | 0.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 74 | Cycle | Base Deletion | 26171 | 1.67 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 75 | Cycle | Base Substitution | 26232 | 32.06 | 30.00 | 31.47 | -1.47 | Before |
| REGRESSION.HCC1395_tumor.L005 | 75 | Cycle | Base Insertion | 26105 | 0.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 75 | Cycle | Base Deletion | 26105 | 1.07 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 76 | Cycle | Base Substitution | 26172 | 34.37 | 30.00 | 31.30 | -1.30 | Before |
| REGRESSION.HCC1395_tumor.L005 | 76 | Cycle | Base Insertion | 26036 | 0.66 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 76 | Cycle | Base Deletion | 26036 | 1.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 77 | Cycle | Base Substitution | 26079 | 39.75 | 30.00 | 31.14 | -1.14 | Before |
| REGRESSION.HCC1395_tumor.L005 | 77 | Cycle | Base Insertion | 25943 | 0.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 77 | Cycle | Base Deletion | 25943 | 1.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 78 | Cycle | Base Substitution | 26076 | 31.73 | 30.00 | 31.31 | -1.31 | Before |
| REGRESSION.HCC1395_tumor.L005 | 78 | Cycle | Base Insertion | 25936 | 0.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 78 | Cycle | Base Deletion | 25936 | 1.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 79 | Cycle | Base Substitution | 25956 | 42.09 | 30.00 | 31.23 | -1.23 | Before |
| REGRESSION.HCC1395_tumor.L005 | 79 | Cycle | Base Insertion | 25793 | 0.85 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 79 | Cycle | Base Deletion | 25793 | 1.62 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 8 | Cycle | Base Substitution | 27191 | 40.62 | 30.00 | 31.47 | -1.47 | Before |
| REGRESSION.HCC1395_tumor.L005 | 8 | Cycle | Base Insertion | 27191 | 0.09 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 8 | Cycle | Base Deletion | 27191 | 1.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 80 | Cycle | Base Substitution | 26039 | 37.97 | 29.00 | 30.97 | -1.97 | Before |
| REGRESSION.HCC1395_tumor.L005 | 80 | Cycle | Base Insertion | 25879 | 0.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 80 | Cycle | Base Deletion | 25879 | 1.73 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 81 | Cycle | Base Substitution | 25999 | 33.83 | 30.00 | 31.02 | -1.02 | Before |
| REGRESSION.HCC1395_tumor.L005 | 81 | Cycle | Base Insertion | 25835 | 0.87 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 81 | Cycle | Base Deletion | 25835 | 1.69 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 82 | Cycle | Base Substitution | 25909 | 38.65 | 30.00 | 31.08 | -1.08 | Before |
| REGRESSION.HCC1395_tumor.L005 | 82 | Cycle | Base Insertion | 25738 | 1.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 82 | Cycle | Base Deletion | 25738 | 1.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 83 | Cycle | Base Substitution | 25716 | 35.94 | 30.00 | 31.10 | -1.10 | Before |
| REGRESSION.HCC1395_tumor.L005 | 83 | Cycle | Base Insertion | 25534 | 0.85 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 83 | Cycle | Base Deletion | 25534 | 0.81 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 84 | Cycle | Base Substitution | 25910 | 48.60 | 29.00 | 30.77 | -1.77 | Before |
| REGRESSION.HCC1395_tumor.L005 | 84 | Cycle | Base Insertion | 25715 | 0.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 84 | Cycle | Base Deletion | 25715 | 0.77 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 85 | Cycle | Base Substitution | 25765 | 38.47 | 29.00 | 30.68 | -1.68 | Before |
| REGRESSION.HCC1395_tumor.L005 | 85 | Cycle | Base Insertion | 25569 | 0.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 85 | Cycle | Base Deletion | 25569 | 1.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 86 | Cycle | Base Substitution | 25676 | 38.62 | 29.00 | 30.92 | -1.92 | Before |
| REGRESSION.HCC1395_tumor.L005 | 86 | Cycle | Base Insertion | 25483 | 0.60 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 86 | Cycle | Base Deletion | 25483 | 0.89 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 87 | Cycle | Base Substitution | 25842 | 37.69 | 29.00 | 30.83 | -1.83 | Before |
| REGRESSION.HCC1395_tumor.L005 | 87 | Cycle | Base Insertion | 25637 | 0.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 87 | Cycle | Base Deletion | 25637 | 1.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 88 | Cycle | Base Substitution | 25590 | 47.73 | 29.00 | 30.78 | -1.78 | Before |
| REGRESSION.HCC1395_tumor.L005 | 88 | Cycle | Base Insertion | 25380 | 0.73 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 88 | Cycle | Base Deletion | 25380 | 0.96 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 89 | Cycle | Base Substitution | 25664 | 44.92 | 29.00 | 30.67 | -1.67 | Before |
| REGRESSION.HCC1395_tumor.L005 | 89 | Cycle | Base Insertion | 25460 | 0.88 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 89 | Cycle | Base Deletion | 25460 | 1.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 9 | Cycle | Base Substitution | 27072 | 30.62 | 31.00 | 31.39 | -0.39 | Before |
| REGRESSION.HCC1395_tumor.L005 | 9 | Cycle | Base Insertion | 27072 | 0.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 9 | Cycle | Base Deletion | 27072 | 1.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 90 | Cycle | Base Substitution | 25715 | 54.60 | 29.00 | 31.06 | -2.06 | Before |
| REGRESSION.HCC1395_tumor.L005 | 90 | Cycle | Base Insertion | 25488 | 0.94 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 90 | Cycle | Base Deletion | 25488 | 1.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 91 | Cycle | Base Substitution | 25499 | 42.74 | 29.00 | 30.64 | -1.64 | Before |
| REGRESSION.HCC1395_tumor.L005 | 91 | Cycle | Base Insertion | 25272 | 0.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 91 | Cycle | Base Deletion | 25272 | 1.01 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 92 | Cycle | Base Substitution | 25397 | 34.89 | 30.00 | 30.94 | -0.94 | Before |
| REGRESSION.HCC1395_tumor.L005 | 92 | Cycle | Base Insertion | 25159 | 0.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 92 | Cycle | Base Deletion | 25159 | 0.87 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 93 | Cycle | Base Substitution | 25262 | 38.05 | 29.00 | 30.62 | -1.62 | Before |
| REGRESSION.HCC1395_tumor.L005 | 93 | Cycle | Base Insertion | 25023 | 0.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 93 | Cycle | Base Deletion | 25023 | 0.93 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 94 | Cycle | Base Substitution | 25375 | 33.53 | 30.00 | 30.83 | -0.83 | Before |
| REGRESSION.HCC1395_tumor.L005 | 94 | Cycle | Base Insertion | 25124 | 1.62 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 94 | Cycle | Base Deletion | 25124 | 0.94 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 95 | Cycle | Base Substitution | 25264 | 43.64 | 29.00 | 30.48 | -1.48 | Before |
| REGRESSION.HCC1395_tumor.L005 | 95 | Cycle | Base Insertion | 25011 | 0.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 95 | Cycle | Base Deletion | 25011 | 1.03 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 96 | Cycle | Base Substitution | 25117 | 43.30 | 29.00 | 30.72 | -1.72 | Before |
| REGRESSION.HCC1395_tumor.L005 | 96 | Cycle | Base Insertion | 24862 | 0.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 96 | Cycle | Base Deletion | 24862 | 0.91 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 97 | Cycle | Base Substitution | 25111 | 38.11 | 29.00 | 30.55 | -1.55 | Before |
| REGRESSION.HCC1395_tumor.L005 | 97 | Cycle | Base Insertion | 24864 | 0.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 97 | Cycle | Base Deletion | 24864 | 0.87 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 98 | Cycle | Base Substitution | 25016 | 43.79 | 29.00 | 30.44 | -1.44 | Before |
| REGRESSION.HCC1395_tumor.L005 | 98 | Cycle | Base Insertion | 24761 | 0.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 98 | Cycle | Base Deletion | 24761 | 1.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 99 | Cycle | Base Substitution | 25058 | 35.41 | 30.00 | 30.96 | -0.96 | Before |
| REGRESSION.HCC1395_tumor.L005 | 99 | Cycle | Base Insertion | 24794 | 0.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 99 | Cycle | Base Deletion | 24794 | 0.91 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 12 | QualityScore | Base Substitution | 80813 | 7750.91 | 10.00 | 12.00 | -2.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 24 | QualityScore | Base Substitution | 197200 | 805.63 | 24.00 | 24.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 40 | QualityScore | Base Substitution | 7315440 | 5561.25 | 31.00 | 40.00 | -9.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 45 | QualityScore | Base Insertion | 7593453 | 134.44 | 47.00 | 45.00 | 2.00 | Before |
| REGRESSION.HCC1395_tumor.L005 | 45 | QualityScore | Base Deletion | 7593453 | 318.74 | 44.00 | 45.00 | -1.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | AA | Context | Base Substitution | 521248 | 1421.59 | 26.00 | 29.56 | -3.56 | Before |
| REGRESSION.HCC1395_tumor.L006 | AAA | Context | Base Insertion | 176566 | 24.16 | 44.00 | 45.00 | -1.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | AAA | Context | Base Deletion | 176566 | 80.72 | 41.00 | 45.00 | -4.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | AAC | Context | Base Insertion | 85012 | 0.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | AAC | Context | Base Deletion | 85012 | 1.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | AAG | Context | Base Insertion | 133043 | 4.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | AAG | Context | Base Deletion | 133043 | 4.12 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | AAT | Context | Base Insertion | 101081 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | AAT | Context | Base Deletion | 101081 | 1.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | AC | Context | Base Substitution | 354833 | 1093.93 | 25.00 | 28.68 | -3.68 | Before |
| REGRESSION.HCC1395_tumor.L006 | ACA | Context | Base Insertion | 131369 | 2.21 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | ACA | Context | Base Deletion | 131369 | 6.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | ACC | Context | Base Insertion | 103798 | 3.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | ACC | Context | Base Deletion | 103798 | 1.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | ACG | Context | Base Insertion | 20526 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | ACG | Context | Base Deletion | 20526 | 2.03 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | ACT | Context | Base Insertion | 104890 | 0.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | ACT | Context | Base Deletion | 104890 | 4.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | AG | Context | Base Substitution | 558648 | 547.40 | 30.00 | 31.67 | -1.67 | Before |
| REGRESSION.HCC1395_tumor.L006 | AGA | Context | Base Insertion | 151250 | 1.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | AGA | Context | Base Deletion | 151250 | 3.80 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | AGC | Context | Base Insertion | 139021 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | AGC | Context | Base Deletion | 139021 | 4.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | AGG | Context | Base Insertion | 162454 | 6.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | AGG | Context | Base Deletion | 162454 | 4.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | AGT | Context | Base Insertion | 102539 | 1.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | AGT | Context | Base Deletion | 102539 | 3.73 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | AT | Context | Base Substitution | 368346 | 465.83 | 29.00 | 32.04 | -3.04 | Before |
| REGRESSION.HCC1395_tumor.L006 | ATA | Context | Base Insertion | 74619 | 0.02 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | ATA | Context | Base Deletion | 74619 | 0.78 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | ATC | Context | Base Insertion | 78981 | 0.12 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | ATC | Context | Base Deletion | 78981 | 0.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | ATG | Context | Base Insertion | 114650 | 0.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | ATG | Context | Base Deletion | 114650 | 0.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | ATT | Context | Base Insertion | 107622 | 0.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | ATT | Context | Base Deletion | 107622 | 2.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | CA | Context | Base Substitution | 591296 | 1254.06 | 27.00 | 29.97 | -2.97 | Before |
| REGRESSION.HCC1395_tumor.L006 | CAA | Context | Base Insertion | 111772 | 1.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | CAA | Context | Base Deletion | 111772 | 3.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | CAC | Context | Base Insertion | 124789 | 4.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | CAC | Context | Base Deletion | 124789 | 7.09 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | CAG | Context | Base Insertion | 212140 | 5.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | CAG | Context | Base Deletion | 212140 | 9.92 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | CAT | Context | Base Insertion | 110892 | 0.04 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | CAT | Context | Base Deletion | 110892 | 1.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | CC | Context | Base Substitution | 547047 | 1716.41 | 25.00 | 28.92 | -3.92 | Before |
| REGRESSION.HCC1395_tumor.L006 | CCA | Context | Base Insertion | 175330 | 1.86 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | CCA | Context | Base Deletion | 175330 | 3.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | CCC | Context | Base Insertion | 149917 | 6.86 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | CCC | Context | Base Deletion | 149917 | 7.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | CCG | Context | Base Insertion | 37514 | 0.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | CCG | Context | Base Deletion | 37514 | 0.96 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | CCT | Context | Base Insertion | 176402 | 0.80 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | CCT | Context | Base Deletion | 176402 | 6.57 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | CG | Context | Base Substitution | 112837 | 343.45 | 26.00 | 29.52 | -3.52 | Before |
| REGRESSION.HCC1395_tumor.L006 | CGA | Context | Base Insertion | 44142 | 0.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | CGA | Context | Base Deletion | 44142 | 0.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | CGC | Context | Base Insertion | 62662 | 0.73 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | CGC | Context | Base Deletion | 62662 | 2.52 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | CGG | Context | Base Insertion | 76509 | 1.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | CGG | Context | Base Deletion | 76509 | 2.65 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | CGT | Context | Base Insertion | 48403 | 0.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | CGT | Context | Base Deletion | 48403 | 0.99 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | CT | Context | Base Substitution | 591999 | 433.60 | 31.00 | 32.50 | -1.50 | Before |
| REGRESSION.HCC1395_tumor.L006 | CTA | Context | Base Insertion | 58235 | 0.04 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | CTA | Context | Base Deletion | 58235 | 4.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | CTC | Context | Base Insertion | 145258 | 1.81 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | CTC | Context | Base Deletion | 145258 | 8.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | CTG | Context | Base Insertion | 211634 | 1.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | CTG | Context | Base Deletion | 211634 | 5.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | CTT | Context | Base Insertion | 145223 | 3.73 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | CTT | Context | Base Deletion | 145223 | 5.73 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | GA | Context | Base Substitution | 493589 | 881.29 | 28.00 | 29.60 | -1.60 | Before |
| REGRESSION.HCC1395_tumor.L006 | GAA | Context | Base Insertion | 140911 | 0.97 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | GAA | Context | Base Deletion | 140911 | 2.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | GAC | Context | Base Insertion | 83365 | 0.67 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | GAC | Context | Base Deletion | 83365 | 0.93 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | GAG | Context | Base Insertion | 149351 | 0.02 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | GAG | Context | Base Deletion | 149351 | 2.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | GAT | Context | Base Insertion | 83382 | 0.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | GAT | Context | Base Deletion | 83382 | 1.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | GC | Context | Base Substitution | 483999 | 1119.30 | 27.00 | 30.11 | -3.11 | Before |
| REGRESSION.HCC1395_tumor.L006 | GCA | Context | Base Insertion | 147914 | 2.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | GCA | Context | Base Deletion | 147914 | 2.80 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | GCC | Context | Base Insertion | 145311 | 0.84 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | GCC | Context | Base Deletion | 145311 | 6.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | GCG | Context | Base Insertion | 35610 | 0.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | GCG | Context | Base Deletion | 35610 | 1.09 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | GCT | Context | Base Insertion | 153777 | 2.69 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | GCT | Context | Base Deletion | 153777 | 1.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | GG | Context | Base Substitution | 572127 | 778.75 | 29.00 | 31.64 | -2.64 | Before |
| REGRESSION.HCC1395_tumor.L006 | GGA | Context | Base Insertion | 155563 | 2.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | GGA | Context | Base Deletion | 155563 | 4.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | GGC | Context | Base Insertion | 143583 | 0.89 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | GGC | Context | Base Deletion | 143583 | 5.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | GGG | Context | Base Insertion | 156667 | 4.92 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | GGG | Context | Base Deletion | 156667 | 10.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | GGT | Context | Base Insertion | 114248 | 1.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | GGT | Context | Base Deletion | 114248 | 1.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | GT | Context | Base Substitution | 404906 | 695.03 | 28.00 | 32.00 | -4.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | GTA | Context | Base Insertion | 65489 | 0.73 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | GTA | Context | Base Deletion | 65489 | 0.83 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | GTC | Context | Base Insertion | 90556 | 0.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | GTC | Context | Base Deletion | 90556 | 1.91 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | GTG | Context | Base Insertion | 138583 | 1.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | GTG | Context | Base Deletion | 138583 | 8.78 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | GTT | Context | Base Insertion | 99186 | 0.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | GTT | Context | Base Deletion | 99186 | 1.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | TA | Context | Base Substitution | 287147 | 806.46 | 26.00 | 29.66 | -3.66 | Before |
| REGRESSION.HCC1395_tumor.L006 | TAA | Context | Base Insertion | 87519 | 1.60 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | TAA | Context | Base Deletion | 87519 | 4.21 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | TAC | Context | Base Insertion | 59333 | 0.03 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | TAC | Context | Base Deletion | 59333 | 3.78 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | TAG | Context | Base Insertion | 59706 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | TAG | Context | Base Deletion | 59706 | 0.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | TAT | Context | Base Insertion | 70297 | 0.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | TAT | Context | Base Deletion | 70297 | 0.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | TC | Context | Base Substitution | 446351 | 1015.65 | 27.00 | 30.48 | -3.48 | Before |
| REGRESSION.HCC1395_tumor.L006 | TCA | Context | Base Insertion | 132119 | 1.07 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | TCA | Context | Base Deletion | 132119 | 6.92 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | TCC | Context | Base Insertion | 144423 | 0.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | TCC | Context | Base Deletion | 144423 | 4.89 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | TCG | Context | Base Insertion | 18327 | 0.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | TCG | Context | Base Deletion | 18327 | 0.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | TCT | Context | Base Insertion | 152905 | 1.78 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | TCT | Context | Base Deletion | 152905 | 6.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | TG | Context | Base Substitution | 582304 | 451.08 | 31.00 | 31.80 | -0.80 | Before |
| REGRESSION.HCC1395_tumor.L006 | TGA | Context | Base Insertion | 138847 | 0.02 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | TGA | Context | Base Deletion | 138847 | 1.77 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | TGC | Context | Base Insertion | 135568 | 1.77 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | TGC | Context | Base Deletion | 135568 | 2.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | TGG | Context | Base Insertion | 172232 | 0.84 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | TGG | Context | Base Deletion | 172232 | 4.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | TGT | Context | Base Insertion | 136995 | 1.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | TGT | Context | Base Deletion | 136995 | 4.61 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | TT | Context | Base Substitution | 533734 | 714.98 | 29.00 | 32.84 | -3.84 | Before |
| REGRESSION.HCC1395_tumor.L006 | TTA | Context | Base Insertion | 86597 | 2.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | TTA | Context | Base Deletion | 86597 | 3.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | TTC | Context | Base Insertion | 128840 | 1.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | TTC | Context | Base Deletion | 128840 | 7.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | TTG | Context | Base Insertion | 113298 | 0.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | TTG | Context | Base Deletion | 113298 | 2.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | TTT | Context | Base Insertion | 178089 | 16.84 | 44.00 | 45.00 | -1.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | TTT | Context | Base Deletion | 178089 | 54.66 | 42.00 | 45.00 | -3.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -1 | Cycle | Base Substitution | 26433 | 96.48 | 25.00 | 26.04 | -1.04 | Before |
| REGRESSION.HCC1395_tumor.L006 | -10 | Cycle | Base Substitution | 26750 | 32.59 | 30.00 | 31.12 | -1.12 | Before |
| REGRESSION.HCC1395_tumor.L006 | -10 | Cycle | Base Insertion | 26750 | 0.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -10 | Cycle | Base Deletion | 26750 | 1.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -100 | Cycle | Base Substitution | 24515 | 50.57 | 29.00 | 30.10 | -1.10 | Before |
| REGRESSION.HCC1395_tumor.L006 | -100 | Cycle | Base Insertion | 24268 | 0.97 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -100 | Cycle | Base Deletion | 24268 | 1.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -101 | Cycle | Base Substitution | 24573 | 46.18 | 29.00 | 30.32 | -1.32 | Before |
| REGRESSION.HCC1395_tumor.L006 | -101 | Cycle | Base Insertion | 24334 | 0.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -101 | Cycle | Base Deletion | 24334 | 1.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -102 | Cycle | Base Substitution | 24477 | 56.20 | 29.00 | 30.24 | -1.24 | Before |
| REGRESSION.HCC1395_tumor.L006 | -102 | Cycle | Base Insertion | 24227 | 0.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -102 | Cycle | Base Deletion | 24227 | 1.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -103 | Cycle | Base Substitution | 24373 | 36.98 | 29.00 | 30.15 | -1.15 | Before |
| REGRESSION.HCC1395_tumor.L006 | -103 | Cycle | Base Insertion | 24131 | 0.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -103 | Cycle | Base Deletion | 24131 | 1.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -104 | Cycle | Base Substitution | 24336 | 44.05 | 28.00 | 29.81 | -1.81 | Before |
| REGRESSION.HCC1395_tumor.L006 | -104 | Cycle | Base Insertion | 24094 | 0.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -104 | Cycle | Base Deletion | 24094 | 1.01 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -105 | Cycle | Base Substitution | 24337 | 47.35 | 29.00 | 30.13 | -1.13 | Before |
| REGRESSION.HCC1395_tumor.L006 | -105 | Cycle | Base Insertion | 24103 | 0.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -105 | Cycle | Base Deletion | 24103 | 0.96 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -106 | Cycle | Base Substitution | 24271 | 37.76 | 29.00 | 30.02 | -1.02 | Before |
| REGRESSION.HCC1395_tumor.L006 | -106 | Cycle | Base Insertion | 24035 | 1.12 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -106 | Cycle | Base Deletion | 24035 | 1.21 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -107 | Cycle | Base Substitution | 24239 | 44.83 | 29.00 | 30.20 | -1.20 | Before |
| REGRESSION.HCC1395_tumor.L006 | -107 | Cycle | Base Insertion | 23990 | 0.52 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -107 | Cycle | Base Deletion | 23990 | 1.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -108 | Cycle | Base Substitution | 24182 | 47.55 | 28.00 | 29.81 | -1.81 | Before |
| REGRESSION.HCC1395_tumor.L006 | -108 | Cycle | Base Insertion | 23922 | 0.76 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -108 | Cycle | Base Deletion | 23922 | 1.12 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -109 | Cycle | Base Substitution | 24030 | 40.49 | 29.00 | 30.15 | -1.15 | Before |
| REGRESSION.HCC1395_tumor.L006 | -109 | Cycle | Base Insertion | 23776 | 0.62 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -109 | Cycle | Base Deletion | 23776 | 1.60 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -11 | Cycle | Base Substitution | 26769 | 39.18 | 30.00 | 31.41 | -1.41 | Before |
| REGRESSION.HCC1395_tumor.L006 | -11 | Cycle | Base Insertion | 26769 | 0.61 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -11 | Cycle | Base Deletion | 26769 | 1.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -110 | Cycle | Base Substitution | 23978 | 45.37 | 28.00 | 29.82 | -1.82 | Before |
| REGRESSION.HCC1395_tumor.L006 | -110 | Cycle | Base Insertion | 23718 | 0.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -110 | Cycle | Base Deletion | 23718 | 1.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -111 | Cycle | Base Substitution | 23973 | 41.22 | 29.00 | 29.71 | -0.71 | Before |
| REGRESSION.HCC1395_tumor.L006 | -111 | Cycle | Base Insertion | 23713 | 0.73 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -111 | Cycle | Base Deletion | 23713 | 1.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -112 | Cycle | Base Substitution | 23901 | 47.81 | 28.00 | 29.81 | -1.81 | Before |
| REGRESSION.HCC1395_tumor.L006 | -112 | Cycle | Base Insertion | 23625 | 0.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -112 | Cycle | Base Deletion | 23625 | 0.95 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -113 | Cycle | Base Substitution | 23932 | 46.00 | 29.00 | 30.04 | -1.04 | Before |
| REGRESSION.HCC1395_tumor.L006 | -113 | Cycle | Base Insertion | 23642 | 0.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -113 | Cycle | Base Deletion | 23642 | 1.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -114 | Cycle | Base Substitution | 23834 | 37.21 | 29.00 | 30.37 | -1.37 | Before |
| REGRESSION.HCC1395_tumor.L006 | -114 | Cycle | Base Insertion | 23533 | 0.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -114 | Cycle | Base Deletion | 23533 | 0.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -115 | Cycle | Base Substitution | 23665 | 53.89 | 29.00 | 30.03 | -1.03 | Before |
| REGRESSION.HCC1395_tumor.L006 | -115 | Cycle | Base Insertion | 23357 | 0.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -115 | Cycle | Base Deletion | 23357 | 1.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -116 | Cycle | Base Substitution | 23587 | 56.54 | 28.00 | 29.80 | -1.80 | Before |
| REGRESSION.HCC1395_tumor.L006 | -116 | Cycle | Base Insertion | 23296 | 0.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -116 | Cycle | Base Deletion | 23296 | 0.92 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -117 | Cycle | Base Substitution | 23597 | 58.03 | 28.00 | 29.54 | -1.54 | Before |
| REGRESSION.HCC1395_tumor.L006 | -117 | Cycle | Base Insertion | 23300 | 0.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -117 | Cycle | Base Deletion | 23300 | 1.02 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -118 | Cycle | Base Substitution | 23516 | 56.71 | 28.00 | 29.69 | -1.69 | Before |
| REGRESSION.HCC1395_tumor.L006 | -118 | Cycle | Base Insertion | 23222 | 0.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -118 | Cycle | Base Deletion | 23222 | 1.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -119 | Cycle | Base Substitution | 23549 | 67.59 | 27.00 | 29.72 | -2.72 | Before |
| REGRESSION.HCC1395_tumor.L006 | -119 | Cycle | Base Insertion | 23255 | 0.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -119 | Cycle | Base Deletion | 23255 | 1.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -12 | Cycle | Base Substitution | 26718 | 31.66 | 30.00 | 31.79 | -1.79 | Before |
| REGRESSION.HCC1395_tumor.L006 | -12 | Cycle | Base Insertion | 26718 | 0.69 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -12 | Cycle | Base Deletion | 26718 | 1.82 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -120 | Cycle | Base Substitution | 23460 | 51.03 | 28.00 | 29.89 | -1.89 | Before |
| REGRESSION.HCC1395_tumor.L006 | -120 | Cycle | Base Insertion | 23173 | 1.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -120 | Cycle | Base Deletion | 23173 | 1.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -121 | Cycle | Base Substitution | 23277 | 67.39 | 27.00 | 29.76 | -2.76 | Before |
| REGRESSION.HCC1395_tumor.L006 | -121 | Cycle | Base Insertion | 22974 | 0.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -121 | Cycle | Base Deletion | 22974 | 1.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -122 | Cycle | Base Substitution | 23186 | 46.76 | 28.00 | 29.80 | -1.80 | Before |
| REGRESSION.HCC1395_tumor.L006 | -122 | Cycle | Base Insertion | 22887 | 0.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -122 | Cycle | Base Deletion | 22887 | 1.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -123 | Cycle | Base Substitution | 23300 | 52.35 | 28.00 | 29.49 | -1.49 | Before |
| REGRESSION.HCC1395_tumor.L006 | -123 | Cycle | Base Insertion | 23008 | 0.02 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -123 | Cycle | Base Deletion | 23008 | 1.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -124 | Cycle | Base Substitution | 23204 | 55.52 | 28.00 | 29.47 | -1.47 | Before |
| REGRESSION.HCC1395_tumor.L006 | -124 | Cycle | Base Insertion | 22919 | 0.02 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -124 | Cycle | Base Deletion | 22919 | 1.66 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -125 | Cycle | Base Substitution | 23077 | 44.79 | 28.00 | 29.75 | -1.75 | Before |
| REGRESSION.HCC1395_tumor.L006 | -125 | Cycle | Base Insertion | 22779 | 0.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -125 | Cycle | Base Deletion | 22779 | 1.74 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -126 | Cycle | Base Substitution | 22999 | 45.34 | 28.00 | 29.65 | -1.65 | Before |
| REGRESSION.HCC1395_tumor.L006 | -126 | Cycle | Base Insertion | 22705 | 0.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -126 | Cycle | Base Deletion | 22705 | 1.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -127 | Cycle | Base Substitution | 22992 | 49.10 | 28.00 | 29.78 | -1.78 | Before |
| REGRESSION.HCC1395_tumor.L006 | -127 | Cycle | Base Insertion | 22712 | 0.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -127 | Cycle | Base Deletion | 22712 | 0.99 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -128 | Cycle | Base Substitution | 22919 | 43.95 | 28.00 | 29.58 | -1.58 | Before |
| REGRESSION.HCC1395_tumor.L006 | -128 | Cycle | Base Insertion | 22616 | 0.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -128 | Cycle | Base Deletion | 22616 | 1.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -129 | Cycle | Base Substitution | 22940 | 43.13 | 28.00 | 29.87 | -1.87 | Before |
| REGRESSION.HCC1395_tumor.L006 | -129 | Cycle | Base Insertion | 22616 | 0.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -129 | Cycle | Base Deletion | 22616 | 0.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -13 | Cycle | Base Substitution | 26717 | 46.38 | 30.00 | 31.33 | -1.33 | Before |
| REGRESSION.HCC1395_tumor.L006 | -13 | Cycle | Base Insertion | 26717 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -13 | Cycle | Base Deletion | 26717 | 1.80 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -130 | Cycle | Base Substitution | 22810 | 46.53 | 28.00 | 29.85 | -1.85 | Before |
| REGRESSION.HCC1395_tumor.L006 | -130 | Cycle | Base Insertion | 22489 | 0.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -130 | Cycle | Base Deletion | 22489 | 0.91 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -131 | Cycle | Base Substitution | 22745 | 40.91 | 28.00 | 29.65 | -1.65 | Before |
| REGRESSION.HCC1395_tumor.L006 | -131 | Cycle | Base Insertion | 22420 | 0.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -131 | Cycle | Base Deletion | 22420 | 1.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -132 | Cycle | Base Substitution | 22591 | 42.98 | 28.00 | 29.49 | -1.49 | Before |
| REGRESSION.HCC1395_tumor.L006 | -132 | Cycle | Base Insertion | 22278 | 0.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -132 | Cycle | Base Deletion | 22278 | 0.74 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -133 | Cycle | Base Substitution | 22488 | 48.92 | 28.00 | 29.46 | -1.46 | Before |
| REGRESSION.HCC1395_tumor.L006 | -133 | Cycle | Base Insertion | 22193 | 0.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -133 | Cycle | Base Deletion | 22193 | 0.83 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -134 | Cycle | Base Substitution | 22354 | 34.82 | 29.00 | 29.84 | -0.84 | Before |
| REGRESSION.HCC1395_tumor.L006 | -134 | Cycle | Base Insertion | 22052 | 0.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -134 | Cycle | Base Deletion | 22052 | 0.67 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -135 | Cycle | Base Substitution | 22352 | 48.29 | 28.00 | 29.86 | -1.86 | Before |
| REGRESSION.HCC1395_tumor.L006 | -135 | Cycle | Base Insertion | 22038 | 0.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -135 | Cycle | Base Deletion | 22038 | 0.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -136 | Cycle | Base Substitution | 22339 | 42.71 | 28.00 | 29.74 | -1.74 | Before |
| REGRESSION.HCC1395_tumor.L006 | -136 | Cycle | Base Insertion | 22004 | 0.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -136 | Cycle | Base Deletion | 22004 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -137 | Cycle | Base Substitution | 22289 | 49.62 | 28.00 | 29.73 | -1.73 | Before |
| REGRESSION.HCC1395_tumor.L006 | -137 | Cycle | Base Insertion | 21936 | 0.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -137 | Cycle | Base Deletion | 21936 | 0.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -138 | Cycle | Base Substitution | 22181 | 55.21 | 28.00 | 29.54 | -1.54 | Before |
| REGRESSION.HCC1395_tumor.L006 | -138 | Cycle | Base Insertion | 21815 | 0.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -138 | Cycle | Base Deletion | 21815 | 0.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -139 | Cycle | Base Substitution | 22193 | 44.43 | 28.00 | 29.45 | -1.45 | Before |
| REGRESSION.HCC1395_tumor.L006 | -139 | Cycle | Base Insertion | 21800 | 0.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -139 | Cycle | Base Deletion | 21800 | 0.62 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -14 | Cycle | Base Substitution | 26786 | 35.41 | 30.00 | 31.67 | -1.67 | Before |
| REGRESSION.HCC1395_tumor.L006 | -14 | Cycle | Base Insertion | 26786 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -14 | Cycle | Base Deletion | 26786 | 1.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -140 | Cycle | Base Substitution | 22031 | 40.44 | 28.00 | 29.52 | -1.52 | Before |
| REGRESSION.HCC1395_tumor.L006 | -140 | Cycle | Base Insertion | 21667 | 0.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -140 | Cycle | Base Deletion | 21667 | 0.62 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -141 | Cycle | Base Substitution | 21913 | 38.51 | 28.00 | 29.64 | -1.64 | Before |
| REGRESSION.HCC1395_tumor.L006 | -141 | Cycle | Base Insertion | 21529 | 0.09 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -141 | Cycle | Base Deletion | 21529 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -142 | Cycle | Base Substitution | 21820 | 43.89 | 28.00 | 29.51 | -1.51 | Before |
| REGRESSION.HCC1395_tumor.L006 | -142 | Cycle | Base Insertion | 21399 | 0.09 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -142 | Cycle | Base Deletion | 21399 | 0.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -143 | Cycle | Base Substitution | 21697 | 42.52 | 28.00 | 29.42 | -1.42 | Before |
| REGRESSION.HCC1395_tumor.L006 | -143 | Cycle | Base Insertion | 21249 | 0.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -143 | Cycle | Base Deletion | 21249 | 0.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -144 | Cycle | Base Substitution | 21601 | 25.83 | 29.00 | 29.84 | -0.84 | Before |
| REGRESSION.HCC1395_tumor.L006 | -144 | Cycle | Base Insertion | 21101 | 0.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -144 | Cycle | Base Deletion | 21101 | 0.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -145 | Cycle | Base Substitution | 21449 | 33.96 | 29.00 | 29.75 | -0.75 | Before |
| REGRESSION.HCC1395_tumor.L006 | -145 | Cycle | Base Insertion | 16490 | 1.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -145 | Cycle | Base Deletion | 16490 | 0.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -146 | Cycle | Base Substitution | 21267 | 67.23 | 27.00 | 29.80 | -2.80 | Before |
| REGRESSION.HCC1395_tumor.L006 | -146 | Cycle | Base Insertion | 16386 | 0.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -146 | Cycle | Base Deletion | 16386 | 0.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -147 | Cycle | Base Substitution | 21233 | 241.83 | 22.00 | 29.68 | -7.68 | Before |
| REGRESSION.HCC1395_tumor.L006 | -148 | Cycle | Base Substitution | 21178 | 853.28 | 15.00 | 30.12 | -15.12 | Before |
| REGRESSION.HCC1395_tumor.L006 | -149 | Cycle | Base Substitution | 13184 | 772.87 | 14.00 | 30.34 | -16.34 | Before |
| REGRESSION.HCC1395_tumor.L006 | -15 | Cycle | Base Substitution | 26677 | 27.06 | 31.00 | 31.64 | -0.64 | Before |
| REGRESSION.HCC1395_tumor.L006 | -15 | Cycle | Base Insertion | 26677 | 0.80 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -15 | Cycle | Base Deletion | 26677 | 2.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -150 | Cycle | Base Substitution | 4563 | 9.97 | 30.00 | 30.25 | -0.25 | Before |
| REGRESSION.HCC1395_tumor.L006 | -16 | Cycle | Base Substitution | 26680 | 35.54 | 30.00 | 31.41 | -1.41 | Before |
| REGRESSION.HCC1395_tumor.L006 | -16 | Cycle | Base Insertion | 26680 | 0.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -16 | Cycle | Base Deletion | 26680 | 1.99 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -17 | Cycle | Base Substitution | 26704 | 35.59 | 30.00 | 31.25 | -1.25 | Before |
| REGRESSION.HCC1395_tumor.L006 | -17 | Cycle | Base Insertion | 26704 | 0.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -17 | Cycle | Base Deletion | 26704 | 2.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -18 | Cycle | Base Substitution | 26682 | 38.22 | 30.00 | 31.92 | -1.92 | Before |
| REGRESSION.HCC1395_tumor.L006 | -18 | Cycle | Base Insertion | 26682 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -18 | Cycle | Base Deletion | 26682 | 2.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -19 | Cycle | Base Substitution | 26724 | 32.48 | 30.00 | 31.91 | -1.91 | Before |
| REGRESSION.HCC1395_tumor.L006 | -19 | Cycle | Base Insertion | 26724 | 0.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -19 | Cycle | Base Deletion | 26724 | 2.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -2 | Cycle | Base Substitution | 26793 | 74.88 | 27.00 | 28.46 | -1.46 | Before |
| REGRESSION.HCC1395_tumor.L006 | -20 | Cycle | Base Substitution | 26674 | 38.88 | 30.00 | 31.64 | -1.64 | Before |
| REGRESSION.HCC1395_tumor.L006 | -20 | Cycle | Base Insertion | 26674 | 0.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -20 | Cycle | Base Deletion | 26674 | 3.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -21 | Cycle | Base Substitution | 26601 | 29.74 | 31.00 | 31.85 | -0.85 | Before |
| REGRESSION.HCC1395_tumor.L006 | -21 | Cycle | Base Insertion | 26601 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -21 | Cycle | Base Deletion | 26601 | 2.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -22 | Cycle | Base Substitution | 26577 | 32.30 | 30.00 | 31.88 | -1.88 | Before |
| REGRESSION.HCC1395_tumor.L006 | -22 | Cycle | Base Insertion | 26577 | 0.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -22 | Cycle | Base Deletion | 26577 | 2.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -23 | Cycle | Base Substitution | 26676 | 31.44 | 31.00 | 31.53 | -0.53 | Before |
| REGRESSION.HCC1395_tumor.L006 | -23 | Cycle | Base Insertion | 26676 | 0.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -23 | Cycle | Base Deletion | 26676 | 2.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -24 | Cycle | Base Substitution | 26653 | 41.06 | 30.00 | 31.80 | -1.80 | Before |
| REGRESSION.HCC1395_tumor.L006 | -24 | Cycle | Base Insertion | 26653 | 0.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -24 | Cycle | Base Deletion | 26653 | 2.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -25 | Cycle | Base Substitution | 26632 | 27.59 | 31.00 | 32.16 | -1.16 | Before |
| REGRESSION.HCC1395_tumor.L006 | -25 | Cycle | Base Insertion | 26632 | 0.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -25 | Cycle | Base Deletion | 26632 | 2.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -26 | Cycle | Base Substitution | 26641 | 39.86 | 29.00 | 30.14 | -1.14 | Before |
| REGRESSION.HCC1395_tumor.L006 | -26 | Cycle | Base Insertion | 26641 | 0.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -26 | Cycle | Base Deletion | 26641 | 2.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -27 | Cycle | Base Substitution | 26594 | 26.33 | 30.00 | 30.05 | -0.05 | Before |
| REGRESSION.HCC1395_tumor.L006 | -27 | Cycle | Base Insertion | 26594 | 0.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -27 | Cycle | Base Deletion | 26594 | 1.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -28 | Cycle | Base Substitution | 26616 | 38.49 | 29.00 | 30.14 | -1.14 | Before |
| REGRESSION.HCC1395_tumor.L006 | -28 | Cycle | Base Insertion | 26616 | 0.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -28 | Cycle | Base Deletion | 26616 | 1.88 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -29 | Cycle | Base Substitution | 26411 | 35.98 | 29.00 | 29.99 | -0.99 | Before |
| REGRESSION.HCC1395_tumor.L006 | -29 | Cycle | Base Insertion | 26411 | 0.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -29 | Cycle | Base Deletion | 26411 | 2.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -3 | Cycle | Base Substitution | 26969 | 78.46 | 27.00 | 29.58 | -2.58 | Before |
| REGRESSION.HCC1395_tumor.L006 | -30 | Cycle | Base Substitution | 26539 | 32.97 | 30.00 | 30.17 | -0.17 | Before |
| REGRESSION.HCC1395_tumor.L006 | -30 | Cycle | Base Insertion | 26539 | 0.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -30 | Cycle | Base Deletion | 26539 | 2.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -31 | Cycle | Base Substitution | 26482 | 45.09 | 29.00 | 30.32 | -1.32 | Before |
| REGRESSION.HCC1395_tumor.L006 | -31 | Cycle | Base Insertion | 26482 | 0.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -31 | Cycle | Base Deletion | 26482 | 1.79 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -32 | Cycle | Base Substitution | 26532 | 31.11 | 30.00 | 30.66 | -0.66 | Before |
| REGRESSION.HCC1395_tumor.L006 | -32 | Cycle | Base Insertion | 26531 | 0.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -32 | Cycle | Base Deletion | 26531 | 1.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -33 | Cycle | Base Substitution | 26487 | 49.09 | 29.00 | 30.23 | -1.23 | Before |
| REGRESSION.HCC1395_tumor.L006 | -33 | Cycle | Base Insertion | 26486 | 0.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -33 | Cycle | Base Deletion | 26486 | 1.73 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -34 | Cycle | Base Substitution | 26523 | 47.96 | 29.00 | 30.21 | -1.21 | Before |
| REGRESSION.HCC1395_tumor.L006 | -34 | Cycle | Base Insertion | 26522 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -34 | Cycle | Base Deletion | 26522 | 1.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -35 | Cycle | Base Substitution | 26579 | 29.97 | 30.00 | 30.45 | -0.45 | Before |
| REGRESSION.HCC1395_tumor.L006 | -35 | Cycle | Base Insertion | 26575 | 0.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -35 | Cycle | Base Deletion | 26575 | 0.85 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -36 | Cycle | Base Substitution | 26510 | 44.70 | 29.00 | 30.37 | -1.37 | Before |
| REGRESSION.HCC1395_tumor.L006 | -36 | Cycle | Base Insertion | 26507 | 0.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -36 | Cycle | Base Deletion | 26507 | 0.74 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -37 | Cycle | Base Substitution | 26563 | 28.63 | 30.00 | 30.55 | -0.55 | Before |
| REGRESSION.HCC1395_tumor.L006 | -37 | Cycle | Base Insertion | 26559 | 0.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -37 | Cycle | Base Deletion | 26559 | 0.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -38 | Cycle | Base Substitution | 26486 | 35.82 | 30.00 | 30.25 | -0.25 | Before |
| REGRESSION.HCC1395_tumor.L006 | -38 | Cycle | Base Insertion | 26482 | 0.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -38 | Cycle | Base Deletion | 26482 | 1.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -39 | Cycle | Base Substitution | 26512 | 27.77 | 30.00 | 30.40 | -0.40 | Before |
| REGRESSION.HCC1395_tumor.L006 | -39 | Cycle | Base Insertion | 26511 | 0.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -39 | Cycle | Base Deletion | 26511 | 1.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -4 | Cycle | Base Substitution | 26749 | 74.17 | 28.00 | 30.02 | -2.02 | Before |
| REGRESSION.HCC1395_tumor.L006 | -40 | Cycle | Base Substitution | 26430 | 30.46 | 30.00 | 30.54 | -0.54 | Before |
| REGRESSION.HCC1395_tumor.L006 | -40 | Cycle | Base Insertion | 26427 | 0.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -40 | Cycle | Base Deletion | 26427 | 1.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -41 | Cycle | Base Substitution | 26470 | 45.13 | 29.00 | 30.44 | -1.44 | Before |
| REGRESSION.HCC1395_tumor.L006 | -41 | Cycle | Base Insertion | 26467 | 0.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -41 | Cycle | Base Deletion | 26467 | 1.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -42 | Cycle | Base Substitution | 26388 | 36.66 | 30.00 | 30.57 | -0.57 | Before |
| REGRESSION.HCC1395_tumor.L006 | -42 | Cycle | Base Insertion | 26385 | 0.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -42 | Cycle | Base Deletion | 26385 | 1.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -43 | Cycle | Base Substitution | 26401 | 33.77 | 30.00 | 30.52 | -0.52 | Before |
| REGRESSION.HCC1395_tumor.L006 | -43 | Cycle | Base Insertion | 26400 | 0.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -43 | Cycle | Base Deletion | 26400 | 1.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -44 | Cycle | Base Substitution | 26344 | 40.02 | 29.00 | 30.98 | -1.98 | Before |
| REGRESSION.HCC1395_tumor.L006 | -44 | Cycle | Base Insertion | 26343 | 0.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -44 | Cycle | Base Deletion | 26343 | 0.98 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -45 | Cycle | Base Substitution | 26388 | 40.64 | 29.00 | 30.37 | -1.37 | Before |
| REGRESSION.HCC1395_tumor.L006 | -45 | Cycle | Base Insertion | 26382 | 0.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -45 | Cycle | Base Deletion | 26382 | 1.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -46 | Cycle | Base Substitution | 26279 | 35.36 | 30.00 | 30.35 | -0.35 | Before |
| REGRESSION.HCC1395_tumor.L006 | -46 | Cycle | Base Insertion | 26274 | 0.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -46 | Cycle | Base Deletion | 26274 | 1.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -47 | Cycle | Base Substitution | 26367 | 41.61 | 29.00 | 30.55 | -1.55 | Before |
| REGRESSION.HCC1395_tumor.L006 | -47 | Cycle | Base Insertion | 26359 | 0.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -47 | Cycle | Base Deletion | 26359 | 1.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -48 | Cycle | Base Substitution | 26380 | 37.16 | 30.00 | 30.72 | -0.72 | Before |
| REGRESSION.HCC1395_tumor.L006 | -48 | Cycle | Base Insertion | 26374 | 0.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -48 | Cycle | Base Deletion | 26374 | 1.62 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -49 | Cycle | Base Substitution | 26378 | 44.90 | 29.00 | 30.53 | -1.53 | Before |
| REGRESSION.HCC1395_tumor.L006 | -49 | Cycle | Base Insertion | 26374 | 0.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -49 | Cycle | Base Deletion | 26374 | 1.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -5 | Cycle | Base Substitution | 26783 | 58.20 | 29.00 | 30.60 | -1.60 | Before |
| REGRESSION.HCC1395_tumor.L006 | -5 | Cycle | Base Insertion | 26783 | 0.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -5 | Cycle | Base Deletion | 26783 | 0.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -50 | Cycle | Base Substitution | 26335 | 45.99 | 29.00 | 30.46 | -1.46 | Before |
| REGRESSION.HCC1395_tumor.L006 | -50 | Cycle | Base Insertion | 26321 | 0.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -50 | Cycle | Base Deletion | 26321 | 1.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -51 | Cycle | Base Substitution | 26354 | 42.14 | 29.00 | 30.63 | -1.63 | Before |
| REGRESSION.HCC1395_tumor.L006 | -51 | Cycle | Base Insertion | 26342 | 0.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -51 | Cycle | Base Deletion | 26342 | 1.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -52 | Cycle | Base Substitution | 26359 | 46.24 | 29.00 | 30.30 | -1.30 | Before |
| REGRESSION.HCC1395_tumor.L006 | -52 | Cycle | Base Insertion | 26342 | 0.61 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -52 | Cycle | Base Deletion | 26342 | 1.21 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -53 | Cycle | Base Substitution | 26357 | 30.28 | 30.00 | 30.44 | -0.44 | Before |
| REGRESSION.HCC1395_tumor.L006 | -53 | Cycle | Base Insertion | 26333 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -53 | Cycle | Base Deletion | 26333 | 1.03 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -54 | Cycle | Base Substitution | 26318 | 38.35 | 29.00 | 30.82 | -1.82 | Before |
| REGRESSION.HCC1395_tumor.L006 | -54 | Cycle | Base Insertion | 26293 | 0.60 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -54 | Cycle | Base Deletion | 26293 | 1.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -55 | Cycle | Base Substitution | 26079 | 33.72 | 30.00 | 30.34 | -0.34 | Before |
| REGRESSION.HCC1395_tumor.L006 | -55 | Cycle | Base Insertion | 26049 | 0.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -55 | Cycle | Base Deletion | 26049 | 0.86 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -56 | Cycle | Base Substitution | 26316 | 31.98 | 30.00 | 30.94 | -0.94 | Before |
| REGRESSION.HCC1395_tumor.L006 | -56 | Cycle | Base Insertion | 26276 | 0.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -56 | Cycle | Base Deletion | 26276 | 0.80 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -57 | Cycle | Base Substitution | 26212 | 40.90 | 29.00 | 30.31 | -1.31 | Before |
| REGRESSION.HCC1395_tumor.L006 | -57 | Cycle | Base Insertion | 26175 | 0.03 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -57 | Cycle | Base Deletion | 26175 | 1.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -58 | Cycle | Base Substitution | 26339 | 36.00 | 30.00 | 30.56 | -0.56 | Before |
| REGRESSION.HCC1395_tumor.L006 | -58 | Cycle | Base Insertion | 26297 | 0.03 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -58 | Cycle | Base Deletion | 26297 | 1.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -59 | Cycle | Base Substitution | 26083 | 27.07 | 30.00 | 30.99 | -0.99 | Before |
| REGRESSION.HCC1395_tumor.L006 | -59 | Cycle | Base Insertion | 26036 | 0.03 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -59 | Cycle | Base Deletion | 26036 | 1.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -6 | Cycle | Base Substitution | 26780 | 50.31 | 29.00 | 30.77 | -1.77 | Before |
| REGRESSION.HCC1395_tumor.L006 | -6 | Cycle | Base Insertion | 26780 | 1.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -6 | Cycle | Base Deletion | 26780 | 0.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -60 | Cycle | Base Substitution | 26117 | 38.09 | 29.00 | 30.73 | -1.73 | Before |
| REGRESSION.HCC1395_tumor.L006 | -60 | Cycle | Base Insertion | 26068 | 0.03 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -60 | Cycle | Base Deletion | 26068 | 1.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -61 | Cycle | Base Substitution | 26064 | 33.35 | 30.00 | 30.49 | -0.49 | Before |
| REGRESSION.HCC1395_tumor.L006 | -61 | Cycle | Base Insertion | 26005 | 0.07 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -61 | Cycle | Base Deletion | 26005 | 1.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -62 | Cycle | Base Substitution | 26155 | 31.08 | 30.00 | 30.36 | -0.36 | Before |
| REGRESSION.HCC1395_tumor.L006 | -62 | Cycle | Base Insertion | 26098 | 0.07 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -62 | Cycle | Base Deletion | 26098 | 1.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -63 | Cycle | Base Substitution | 26252 | 33.33 | 30.00 | 30.74 | -0.74 | Before |
| REGRESSION.HCC1395_tumor.L006 | -63 | Cycle | Base Insertion | 26187 | 0.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -63 | Cycle | Base Deletion | 26187 | 0.94 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -64 | Cycle | Base Substitution | 26115 | 29.27 | 30.00 | 30.64 | -0.64 | Before |
| REGRESSION.HCC1395_tumor.L006 | -64 | Cycle | Base Insertion | 26047 | 0.12 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -64 | Cycle | Base Deletion | 26047 | 0.90 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -65 | Cycle | Base Substitution | 26056 | 46.89 | 29.00 | 30.45 | -1.45 | Before |
| REGRESSION.HCC1395_tumor.L006 | -65 | Cycle | Base Insertion | 25986 | 1.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -65 | Cycle | Base Deletion | 25986 | 0.94 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -66 | Cycle | Base Substitution | 25998 | 34.54 | 30.00 | 30.34 | -0.34 | Before |
| REGRESSION.HCC1395_tumor.L006 | -66 | Cycle | Base Insertion | 25914 | 0.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -66 | Cycle | Base Deletion | 25914 | 0.98 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -67 | Cycle | Base Substitution | 26015 | 46.16 | 29.00 | 30.62 | -1.62 | Before |
| REGRESSION.HCC1395_tumor.L006 | -67 | Cycle | Base Insertion | 25932 | 0.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -67 | Cycle | Base Deletion | 25932 | 1.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -68 | Cycle | Base Substitution | 26024 | 47.17 | 29.00 | 30.69 | -1.69 | Before |
| REGRESSION.HCC1395_tumor.L006 | -68 | Cycle | Base Insertion | 25944 | 0.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -68 | Cycle | Base Deletion | 25944 | 0.98 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -69 | Cycle | Base Substitution | 26025 | 26.09 | 30.00 | 30.88 | -0.88 | Before |
| REGRESSION.HCC1395_tumor.L006 | -69 | Cycle | Base Insertion | 25934 | 0.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -69 | Cycle | Base Deletion | 25934 | 1.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -7 | Cycle | Base Substitution | 26696 | 53.94 | 29.00 | 30.79 | -1.79 | Before |
| REGRESSION.HCC1395_tumor.L006 | -7 | Cycle | Base Insertion | 26696 | 0.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -7 | Cycle | Base Deletion | 26696 | 0.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -70 | Cycle | Base Substitution | 26025 | 41.60 | 29.00 | 30.66 | -1.66 | Before |
| REGRESSION.HCC1395_tumor.L006 | -70 | Cycle | Base Insertion | 25934 | 0.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -70 | Cycle | Base Deletion | 25934 | 1.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -71 | Cycle | Base Substitution | 25970 | 39.22 | 29.00 | 30.44 | -1.44 | Before |
| REGRESSION.HCC1395_tumor.L006 | -71 | Cycle | Base Insertion | 25861 | 0.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -71 | Cycle | Base Deletion | 25861 | 1.67 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -72 | Cycle | Base Substitution | 25815 | 45.57 | 29.00 | 30.68 | -1.68 | Before |
| REGRESSION.HCC1395_tumor.L006 | -72 | Cycle | Base Insertion | 25702 | 0.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -72 | Cycle | Base Deletion | 25702 | 1.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -73 | Cycle | Base Substitution | 25777 | 39.42 | 29.00 | 30.21 | -1.21 | Before |
| REGRESSION.HCC1395_tumor.L006 | -73 | Cycle | Base Insertion | 25643 | 0.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -73 | Cycle | Base Deletion | 25643 | 1.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -74 | Cycle | Base Substitution | 25836 | 45.93 | 29.00 | 30.13 | -1.13 | Before |
| REGRESSION.HCC1395_tumor.L006 | -74 | Cycle | Base Insertion | 25707 | 0.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -74 | Cycle | Base Deletion | 25707 | 1.02 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -75 | Cycle | Base Substitution | 25806 | 42.80 | 29.00 | 30.79 | -1.79 | Before |
| REGRESSION.HCC1395_tumor.L006 | -75 | Cycle | Base Insertion | 25677 | 0.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -75 | Cycle | Base Deletion | 25677 | 1.12 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -76 | Cycle | Base Substitution | 25753 | 31.70 | 30.00 | 30.91 | -0.91 | Before |
| REGRESSION.HCC1395_tumor.L006 | -76 | Cycle | Base Insertion | 25614 | 0.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -76 | Cycle | Base Deletion | 25614 | 1.21 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -77 | Cycle | Base Substitution | 25766 | 49.86 | 29.00 | 30.15 | -1.15 | Before |
| REGRESSION.HCC1395_tumor.L006 | -77 | Cycle | Base Insertion | 25619 | 0.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -77 | Cycle | Base Deletion | 25619 | 1.62 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -78 | Cycle | Base Substitution | 25644 | 53.64 | 29.00 | 30.32 | -1.32 | Before |
| REGRESSION.HCC1395_tumor.L006 | -78 | Cycle | Base Insertion | 25494 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -78 | Cycle | Base Deletion | 25494 | 1.61 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -79 | Cycle | Base Substitution | 25623 | 36.42 | 30.00 | 30.60 | -0.60 | Before |
| REGRESSION.HCC1395_tumor.L006 | -79 | Cycle | Base Insertion | 25463 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -79 | Cycle | Base Deletion | 25463 | 1.75 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -8 | Cycle | Base Substitution | 26831 | 45.37 | 29.00 | 30.65 | -1.65 | Before |
| REGRESSION.HCC1395_tumor.L006 | -8 | Cycle | Base Insertion | 26831 | 0.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -8 | Cycle | Base Deletion | 26831 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -80 | Cycle | Base Substitution | 25811 | 37.28 | 29.00 | 30.57 | -1.57 | Before |
| REGRESSION.HCC1395_tumor.L006 | -80 | Cycle | Base Insertion | 25637 | 1.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -80 | Cycle | Base Deletion | 25637 | 1.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -81 | Cycle | Base Substitution | 25599 | 43.93 | 29.00 | 30.47 | -1.47 | Before |
| REGRESSION.HCC1395_tumor.L006 | -81 | Cycle | Base Insertion | 25414 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -81 | Cycle | Base Deletion | 25414 | 0.95 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -82 | Cycle | Base Substitution | 25573 | 47.68 | 29.00 | 30.33 | -1.33 | Before |
| REGRESSION.HCC1395_tumor.L006 | -82 | Cycle | Base Insertion | 25383 | 0.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -82 | Cycle | Base Deletion | 25383 | 1.02 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -83 | Cycle | Base Substitution | 25438 | 41.66 | 29.00 | 30.26 | -1.26 | Before |
| REGRESSION.HCC1395_tumor.L006 | -83 | Cycle | Base Insertion | 25237 | 0.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -83 | Cycle | Base Deletion | 25237 | 1.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -84 | Cycle | Base Substitution | 25501 | 38.99 | 29.00 | 30.38 | -1.38 | Before |
| REGRESSION.HCC1395_tumor.L006 | -84 | Cycle | Base Insertion | 25303 | 0.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -84 | Cycle | Base Deletion | 25303 | 1.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -85 | Cycle | Base Substitution | 25392 | 46.57 | 29.00 | 30.24 | -1.24 | Before |
| REGRESSION.HCC1395_tumor.L006 | -85 | Cycle | Base Insertion | 25202 | 0.74 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -85 | Cycle | Base Deletion | 25202 | 1.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -86 | Cycle | Base Substitution | 25364 | 45.64 | 29.00 | 30.58 | -1.58 | Before |
| REGRESSION.HCC1395_tumor.L006 | -86 | Cycle | Base Insertion | 25171 | 0.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -86 | Cycle | Base Deletion | 25171 | 1.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -87 | Cycle | Base Substitution | 25237 | 47.92 | 29.00 | 30.44 | -1.44 | Before |
| REGRESSION.HCC1395_tumor.L006 | -87 | Cycle | Base Insertion | 25053 | 0.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -87 | Cycle | Base Deletion | 25053 | 0.93 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -88 | Cycle | Base Substitution | 25283 | 40.45 | 29.00 | 30.32 | -1.32 | Before |
| REGRESSION.HCC1395_tumor.L006 | -88 | Cycle | Base Insertion | 25090 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -88 | Cycle | Base Deletion | 25090 | 0.84 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -89 | Cycle | Base Substitution | 25259 | 50.86 | 29.00 | 30.36 | -1.36 | Before |
| REGRESSION.HCC1395_tumor.L006 | -89 | Cycle | Base Insertion | 25054 | 0.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -89 | Cycle | Base Deletion | 25054 | 1.01 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -9 | Cycle | Base Substitution | 26838 | 52.53 | 29.00 | 30.92 | -1.92 | Before |
| REGRESSION.HCC1395_tumor.L006 | -9 | Cycle | Base Insertion | 26838 | 0.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -9 | Cycle | Base Deletion | 26838 | 1.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -90 | Cycle | Base Substitution | 25126 | 49.91 | 28.00 | 29.89 | -1.89 | Before |
| REGRESSION.HCC1395_tumor.L006 | -90 | Cycle | Base Insertion | 24916 | 0.60 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -90 | Cycle | Base Deletion | 24916 | 0.75 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -91 | Cycle | Base Substitution | 25146 | 37.27 | 29.00 | 30.46 | -1.46 | Before |
| REGRESSION.HCC1395_tumor.L006 | -91 | Cycle | Base Insertion | 24933 | 0.87 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -91 | Cycle | Base Deletion | 24933 | 1.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -92 | Cycle | Base Substitution | 25008 | 44.75 | 29.00 | 30.46 | -1.46 | Before |
| REGRESSION.HCC1395_tumor.L006 | -92 | Cycle | Base Insertion | 24787 | 0.83 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -92 | Cycle | Base Deletion | 24787 | 1.52 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -93 | Cycle | Base Substitution | 24817 | 44.97 | 29.00 | 30.07 | -1.07 | Before |
| REGRESSION.HCC1395_tumor.L006 | -93 | Cycle | Base Insertion | 24594 | 0.99 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -93 | Cycle | Base Deletion | 24594 | 1.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -94 | Cycle | Base Substitution | 24889 | 51.17 | 29.00 | 30.03 | -1.03 | Before |
| REGRESSION.HCC1395_tumor.L006 | -94 | Cycle | Base Insertion | 24649 | 1.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -94 | Cycle | Base Deletion | 24649 | 0.89 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -95 | Cycle | Base Substitution | 24869 | 53.75 | 29.00 | 30.21 | -1.21 | Before |
| REGRESSION.HCC1395_tumor.L006 | -95 | Cycle | Base Insertion | 24632 | 0.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -95 | Cycle | Base Deletion | 24632 | 1.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -96 | Cycle | Base Substitution | 24788 | 55.31 | 29.00 | 30.10 | -1.10 | Before |
| REGRESSION.HCC1395_tumor.L006 | -96 | Cycle | Base Insertion | 24537 | 0.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -96 | Cycle | Base Deletion | 24537 | 2.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -97 | Cycle | Base Substitution | 24794 | 42.01 | 29.00 | 30.42 | -1.42 | Before |
| REGRESSION.HCC1395_tumor.L006 | -97 | Cycle | Base Insertion | 24539 | 0.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -97 | Cycle | Base Deletion | 24539 | 0.92 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -98 | Cycle | Base Substitution | 24808 | 44.86 | 29.00 | 30.28 | -1.28 | Before |
| REGRESSION.HCC1395_tumor.L006 | -98 | Cycle | Base Insertion | 24559 | 0.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -98 | Cycle | Base Deletion | 24559 | 1.65 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -99 | Cycle | Base Substitution | 24667 | 49.70 | 29.00 | 30.21 | -1.21 | Before |
| REGRESSION.HCC1395_tumor.L006 | -99 | Cycle | Base Insertion | 24423 | 0.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | -99 | Cycle | Base Deletion | 24423 | 2.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 1 | Cycle | Base Substitution | 26501 | 59.56 | 27.00 | 28.68 | -1.68 | Before |
| REGRESSION.HCC1395_tumor.L006 | 10 | Cycle | Base Substitution | 26837 | 36.69 | 30.00 | 31.21 | -1.21 | Before |
| REGRESSION.HCC1395_tumor.L006 | 10 | Cycle | Base Insertion | 26837 | 0.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 10 | Cycle | Base Deletion | 26837 | 2.02 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 100 | Cycle | Base Substitution | 24525 | 42.53 | 29.00 | 30.57 | -1.57 | Before |
| REGRESSION.HCC1395_tumor.L006 | 100 | Cycle | Base Insertion | 24286 | 0.76 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 100 | Cycle | Base Deletion | 24286 | 1.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 101 | Cycle | Base Substitution | 24559 | 37.78 | 29.00 | 30.64 | -1.64 | Before |
| REGRESSION.HCC1395_tumor.L006 | 101 | Cycle | Base Insertion | 24329 | 0.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 101 | Cycle | Base Deletion | 24329 | 1.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 102 | Cycle | Base Substitution | 24556 | 32.66 | 30.00 | 30.74 | -0.74 | Before |
| REGRESSION.HCC1395_tumor.L006 | 102 | Cycle | Base Insertion | 24300 | 0.94 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 102 | Cycle | Base Deletion | 24300 | 1.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 103 | Cycle | Base Substitution | 24567 | 42.81 | 29.00 | 30.84 | -1.84 | Before |
| REGRESSION.HCC1395_tumor.L006 | 103 | Cycle | Base Insertion | 24315 | 0.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 103 | Cycle | Base Deletion | 24315 | 1.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 104 | Cycle | Base Substitution | 24404 | 48.66 | 29.00 | 30.45 | -1.45 | Before |
| REGRESSION.HCC1395_tumor.L006 | 104 | Cycle | Base Insertion | 24172 | 0.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 104 | Cycle | Base Deletion | 24172 | 1.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 105 | Cycle | Base Substitution | 24346 | 40.00 | 29.00 | 30.19 | -1.19 | Before |
| REGRESSION.HCC1395_tumor.L006 | 105 | Cycle | Base Insertion | 24110 | 0.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 105 | Cycle | Base Deletion | 24110 | 0.97 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 106 | Cycle | Base Substitution | 24335 | 39.69 | 29.00 | 30.58 | -1.58 | Before |
| REGRESSION.HCC1395_tumor.L006 | 106 | Cycle | Base Insertion | 24114 | 0.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 106 | Cycle | Base Deletion | 24114 | 1.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 107 | Cycle | Base Substitution | 24243 | 47.27 | 29.00 | 30.33 | -1.33 | Before |
| REGRESSION.HCC1395_tumor.L006 | 107 | Cycle | Base Insertion | 23975 | 0.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 107 | Cycle | Base Deletion | 23975 | 1.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 108 | Cycle | Base Substitution | 24140 | 61.51 | 28.00 | 30.26 | -2.26 | Before |
| REGRESSION.HCC1395_tumor.L006 | 108 | Cycle | Base Insertion | 23880 | 0.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 108 | Cycle | Base Deletion | 23880 | 0.96 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 109 | Cycle | Base Substitution | 24114 | 49.04 | 29.00 | 30.36 | -1.36 | Before |
| REGRESSION.HCC1395_tumor.L006 | 109 | Cycle | Base Insertion | 23862 | 0.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 109 | Cycle | Base Deletion | 23862 | 1.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 11 | Cycle | Base Substitution | 26789 | 31.30 | 31.00 | 31.33 | -0.33 | Before |
| REGRESSION.HCC1395_tumor.L006 | 11 | Cycle | Base Insertion | 26789 | 0.66 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 11 | Cycle | Base Deletion | 26789 | 1.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 110 | Cycle | Base Substitution | 23974 | 58.43 | 29.00 | 30.37 | -1.37 | Before |
| REGRESSION.HCC1395_tumor.L006 | 110 | Cycle | Base Insertion | 23721 | 0.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 110 | Cycle | Base Deletion | 23721 | 1.03 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 111 | Cycle | Base Substitution | 23925 | 44.63 | 29.00 | 30.33 | -1.33 | Before |
| REGRESSION.HCC1395_tumor.L006 | 111 | Cycle | Base Insertion | 23676 | 0.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 111 | Cycle | Base Deletion | 23676 | 1.01 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 112 | Cycle | Base Substitution | 23911 | 40.95 | 29.00 | 30.33 | -1.33 | Before |
| REGRESSION.HCC1395_tumor.L006 | 112 | Cycle | Base Insertion | 23644 | 0.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 112 | Cycle | Base Deletion | 23644 | 1.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 113 | Cycle | Base Substitution | 23808 | 49.97 | 29.00 | 30.23 | -1.23 | Before |
| REGRESSION.HCC1395_tumor.L006 | 113 | Cycle | Base Insertion | 23524 | 0.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 113 | Cycle | Base Deletion | 23524 | 1.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 114 | Cycle | Base Substitution | 23878 | 43.15 | 29.00 | 30.45 | -1.45 | Before |
| REGRESSION.HCC1395_tumor.L006 | 114 | Cycle | Base Insertion | 23547 | 0.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 114 | Cycle | Base Deletion | 23547 | 1.65 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 115 | Cycle | Base Substitution | 23809 | 39.74 | 29.00 | 30.47 | -1.47 | Before |
| REGRESSION.HCC1395_tumor.L006 | 115 | Cycle | Base Insertion | 23507 | 0.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 115 | Cycle | Base Deletion | 23507 | 2.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 116 | Cycle | Base Substitution | 23762 | 42.51 | 29.00 | 30.13 | -1.13 | Before |
| REGRESSION.HCC1395_tumor.L006 | 116 | Cycle | Base Insertion | 23469 | 0.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 116 | Cycle | Base Deletion | 23469 | 1.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 117 | Cycle | Base Substitution | 23770 | 47.82 | 29.00 | 30.14 | -1.14 | Before |
| REGRESSION.HCC1395_tumor.L006 | 117 | Cycle | Base Insertion | 23480 | 0.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 117 | Cycle | Base Deletion | 23480 | 1.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 118 | Cycle | Base Substitution | 23576 | 51.55 | 29.00 | 30.25 | -1.25 | Before |
| REGRESSION.HCC1395_tumor.L006 | 118 | Cycle | Base Insertion | 23288 | 0.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 118 | Cycle | Base Deletion | 23288 | 1.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 119 | Cycle | Base Substitution | 23503 | 51.22 | 29.00 | 30.25 | -1.25 | Before |
| REGRESSION.HCC1395_tumor.L006 | 119 | Cycle | Base Insertion | 23207 | 0.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 119 | Cycle | Base Deletion | 23207 | 1.80 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 12 | Cycle | Base Substitution | 26735 | 31.22 | 30.00 | 30.99 | -0.99 | Before |
| REGRESSION.HCC1395_tumor.L006 | 12 | Cycle | Base Insertion | 26735 | 0.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 12 | Cycle | Base Deletion | 26735 | 1.67 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 120 | Cycle | Base Substitution | 23462 | 42.34 | 29.00 | 30.12 | -1.12 | Before |
| REGRESSION.HCC1395_tumor.L006 | 120 | Cycle | Base Insertion | 23157 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 120 | Cycle | Base Deletion | 23157 | 1.79 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 121 | Cycle | Base Substitution | 23441 | 43.25 | 28.00 | 29.72 | -1.72 | Before |
| REGRESSION.HCC1395_tumor.L006 | 121 | Cycle | Base Insertion | 23150 | 0.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 121 | Cycle | Base Deletion | 23150 | 2.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 122 | Cycle | Base Substitution | 23342 | 41.42 | 28.00 | 29.90 | -1.90 | Before |
| REGRESSION.HCC1395_tumor.L006 | 122 | Cycle | Base Insertion | 23037 | 0.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 122 | Cycle | Base Deletion | 23037 | 1.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 123 | Cycle | Base Substitution | 23175 | 46.45 | 28.00 | 29.76 | -1.76 | Before |
| REGRESSION.HCC1395_tumor.L006 | 123 | Cycle | Base Insertion | 22898 | 0.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 123 | Cycle | Base Deletion | 22898 | 1.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 124 | Cycle | Base Substitution | 23153 | 51.01 | 29.00 | 30.18 | -1.18 | Before |
| REGRESSION.HCC1395_tumor.L006 | 124 | Cycle | Base Insertion | 22877 | 1.21 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 124 | Cycle | Base Deletion | 22877 | 1.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 125 | Cycle | Base Substitution | 23007 | 35.20 | 29.00 | 29.95 | -0.95 | Before |
| REGRESSION.HCC1395_tumor.L006 | 125 | Cycle | Base Insertion | 22714 | 0.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 125 | Cycle | Base Deletion | 22714 | 1.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 126 | Cycle | Base Substitution | 23004 | 58.83 | 28.00 | 29.60 | -1.60 | Before |
| REGRESSION.HCC1395_tumor.L006 | 126 | Cycle | Base Insertion | 22716 | 0.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 126 | Cycle | Base Deletion | 22716 | 0.96 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 127 | Cycle | Base Substitution | 22980 | 47.92 | 28.00 | 29.85 | -1.85 | Before |
| REGRESSION.HCC1395_tumor.L006 | 127 | Cycle | Base Insertion | 22700 | 0.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 127 | Cycle | Base Deletion | 22700 | 0.76 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 128 | Cycle | Base Substitution | 22897 | 47.32 | 28.00 | 30.00 | -2.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 128 | Cycle | Base Insertion | 22611 | 0.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 128 | Cycle | Base Deletion | 22611 | 0.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 129 | Cycle | Base Substitution | 22829 | 53.78 | 28.00 | 29.58 | -1.58 | Before |
| REGRESSION.HCC1395_tumor.L006 | 129 | Cycle | Base Insertion | 22515 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 129 | Cycle | Base Deletion | 22515 | 0.77 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 13 | Cycle | Base Substitution | 26737 | 37.71 | 30.00 | 31.06 | -1.06 | Before |
| REGRESSION.HCC1395_tumor.L006 | 13 | Cycle | Base Insertion | 26737 | 0.77 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 13 | Cycle | Base Deletion | 26737 | 1.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 130 | Cycle | Base Substitution | 22708 | 35.79 | 29.00 | 29.96 | -0.96 | Before |
| REGRESSION.HCC1395_tumor.L006 | 130 | Cycle | Base Insertion | 22410 | 0.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 130 | Cycle | Base Deletion | 22410 | 0.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 131 | Cycle | Base Substitution | 22788 | 46.73 | 28.00 | 29.67 | -1.67 | Before |
| REGRESSION.HCC1395_tumor.L006 | 131 | Cycle | Base Insertion | 22465 | 0.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 131 | Cycle | Base Deletion | 22465 | 0.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 132 | Cycle | Base Substitution | 22768 | 45.75 | 28.00 | 29.63 | -1.63 | Before |
| REGRESSION.HCC1395_tumor.L006 | 132 | Cycle | Base Insertion | 22443 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 132 | Cycle | Base Deletion | 22443 | 1.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 133 | Cycle | Base Substitution | 22604 | 46.88 | 29.00 | 30.03 | -1.03 | Before |
| REGRESSION.HCC1395_tumor.L006 | 133 | Cycle | Base Insertion | 22318 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 133 | Cycle | Base Deletion | 22318 | 0.88 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 134 | Cycle | Base Substitution | 22549 | 42.06 | 29.00 | 30.19 | -1.19 | Before |
| REGRESSION.HCC1395_tumor.L006 | 134 | Cycle | Base Insertion | 22227 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 134 | Cycle | Base Deletion | 22227 | 1.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 135 | Cycle | Base Substitution | 22547 | 46.88 | 28.00 | 29.88 | -1.88 | Before |
| REGRESSION.HCC1395_tumor.L006 | 135 | Cycle | Base Insertion | 22236 | 0.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 135 | Cycle | Base Deletion | 22236 | 1.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 136 | Cycle | Base Substitution | 22338 | 27.87 | 30.00 | 30.24 | -0.24 | Before |
| REGRESSION.HCC1395_tumor.L006 | 136 | Cycle | Base Insertion | 22004 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 136 | Cycle | Base Deletion | 22004 | 0.99 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 137 | Cycle | Base Substitution | 22386 | 50.45 | 28.00 | 29.73 | -1.73 | Before |
| REGRESSION.HCC1395_tumor.L006 | 137 | Cycle | Base Insertion | 22066 | 0.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 137 | Cycle | Base Deletion | 22066 | 0.74 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 138 | Cycle | Base Substitution | 22209 | 41.51 | 29.00 | 30.07 | -1.07 | Before |
| REGRESSION.HCC1395_tumor.L006 | 138 | Cycle | Base Insertion | 21895 | 0.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 138 | Cycle | Base Deletion | 21895 | 0.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 139 | Cycle | Base Substitution | 22219 | 38.02 | 29.00 | 30.03 | -1.03 | Before |
| REGRESSION.HCC1395_tumor.L006 | 139 | Cycle | Base Insertion | 21875 | 0.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 139 | Cycle | Base Deletion | 21875 | 1.09 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 14 | Cycle | Base Substitution | 26774 | 34.37 | 30.00 | 31.33 | -1.33 | Before |
| REGRESSION.HCC1395_tumor.L006 | 14 | Cycle | Base Insertion | 26774 | 0.83 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 14 | Cycle | Base Deletion | 26774 | 1.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 140 | Cycle | Base Substitution | 22081 | 45.13 | 28.00 | 29.78 | -1.78 | Before |
| REGRESSION.HCC1395_tumor.L006 | 140 | Cycle | Base Insertion | 21759 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 140 | Cycle | Base Deletion | 21759 | 0.91 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 141 | Cycle | Base Substitution | 22021 | 52.99 | 28.00 | 29.64 | -1.64 | Before |
| REGRESSION.HCC1395_tumor.L006 | 141 | Cycle | Base Insertion | 21700 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 141 | Cycle | Base Deletion | 21700 | 0.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 142 | Cycle | Base Substitution | 21908 | 39.93 | 29.00 | 30.02 | -1.02 | Before |
| REGRESSION.HCC1395_tumor.L006 | 142 | Cycle | Base Insertion | 21538 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 142 | Cycle | Base Deletion | 21538 | 0.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 143 | Cycle | Base Substitution | 21805 | 44.41 | 28.00 | 29.75 | -1.75 | Before |
| REGRESSION.HCC1395_tumor.L006 | 143 | Cycle | Base Insertion | 21432 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 143 | Cycle | Base Deletion | 21432 | 0.73 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 144 | Cycle | Base Substitution | 21834 | 41.44 | 28.00 | 29.57 | -1.57 | Before |
| REGRESSION.HCC1395_tumor.L006 | 144 | Cycle | Base Insertion | 21487 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 144 | Cycle | Base Deletion | 21487 | 0.76 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 145 | Cycle | Base Substitution | 21697 | 39.87 | 28.00 | 29.88 | -1.88 | Before |
| REGRESSION.HCC1395_tumor.L006 | 145 | Cycle | Base Insertion | 21303 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 145 | Cycle | Base Deletion | 21303 | 0.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 146 | Cycle | Base Substitution | 21527 | 40.73 | 28.00 | 29.51 | -1.51 | Before |
| REGRESSION.HCC1395_tumor.L006 | 146 | Cycle | Base Insertion | 21187 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 146 | Cycle | Base Deletion | 21187 | 0.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 147 | Cycle | Base Substitution | 21526 | 54.85 | 28.00 | 29.85 | -1.85 | Before |
| REGRESSION.HCC1395_tumor.L006 | 148 | Cycle | Base Substitution | 21381 | 41.96 | 28.00 | 29.56 | -1.56 | Before |
| REGRESSION.HCC1395_tumor.L006 | 149 | Cycle | Base Substitution | 21328 | 48.39 | 28.00 | 29.62 | -1.62 | Before |
| REGRESSION.HCC1395_tumor.L006 | 15 | Cycle | Base Substitution | 26714 | 34.19 | 30.00 | 31.70 | -1.70 | Before |
| REGRESSION.HCC1395_tumor.L006 | 15 | Cycle | Base Insertion | 26714 | 0.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 15 | Cycle | Base Deletion | 26714 | 1.73 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 150 | Cycle | Base Substitution | 21309 | 47.72 | 28.00 | 29.72 | -1.72 | Before |
| REGRESSION.HCC1395_tumor.L006 | 16 | Cycle | Base Substitution | 26752 | 28.56 | 31.00 | 32.80 | -1.80 | Before |
| REGRESSION.HCC1395_tumor.L006 | 16 | Cycle | Base Insertion | 26752 | 0.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 16 | Cycle | Base Deletion | 26752 | 1.73 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 17 | Cycle | Base Substitution | 26663 | 25.09 | 32.00 | 32.89 | -0.89 | Before |
| REGRESSION.HCC1395_tumor.L006 | 17 | Cycle | Base Insertion | 26663 | 0.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 17 | Cycle | Base Deletion | 26663 | 1.57 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 18 | Cycle | Base Substitution | 26616 | 22.32 | 32.00 | 32.63 | -0.63 | Before |
| REGRESSION.HCC1395_tumor.L006 | 18 | Cycle | Base Insertion | 26616 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 18 | Cycle | Base Deletion | 26616 | 1.86 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 19 | Cycle | Base Substitution | 26529 | 21.65 | 32.00 | 32.68 | -0.68 | Before |
| REGRESSION.HCC1395_tumor.L006 | 19 | Cycle | Base Insertion | 26529 | 0.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 19 | Cycle | Base Deletion | 26529 | 1.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 2 | Cycle | Base Substitution | 26787 | 50.93 | 29.00 | 30.14 | -1.14 | Before |
| REGRESSION.HCC1395_tumor.L006 | 20 | Cycle | Base Substitution | 26649 | 23.91 | 32.00 | 32.65 | -0.65 | Before |
| REGRESSION.HCC1395_tumor.L006 | 20 | Cycle | Base Insertion | 26649 | 0.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 20 | Cycle | Base Deletion | 26649 | 1.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 21 | Cycle | Base Substitution | 26639 | 26.97 | 32.00 | 33.58 | -1.58 | Before |
| REGRESSION.HCC1395_tumor.L006 | 21 | Cycle | Base Insertion | 26639 | 0.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 21 | Cycle | Base Deletion | 26639 | 1.75 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 22 | Cycle | Base Substitution | 26560 | 20.81 | 33.00 | 33.19 | -0.19 | Before |
| REGRESSION.HCC1395_tumor.L006 | 22 | Cycle | Base Insertion | 26560 | 0.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 22 | Cycle | Base Deletion | 26560 | 1.84 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 23 | Cycle | Base Substitution | 26586 | 13.47 | 33.00 | 33.15 | -0.15 | Before |
| REGRESSION.HCC1395_tumor.L006 | 23 | Cycle | Base Insertion | 26586 | 0.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 23 | Cycle | Base Deletion | 26586 | 1.93 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 24 | Cycle | Base Substitution | 26594 | 17.79 | 33.00 | 33.19 | -0.19 | Before |
| REGRESSION.HCC1395_tumor.L006 | 24 | Cycle | Base Insertion | 26594 | 0.75 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 24 | Cycle | Base Deletion | 26594 | 1.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 25 | Cycle | Base Substitution | 26535 | 29.53 | 31.00 | 32.71 | -1.71 | Before |
| REGRESSION.HCC1395_tumor.L006 | 25 | Cycle | Base Insertion | 26535 | 1.81 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 25 | Cycle | Base Deletion | 26535 | 1.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 26 | Cycle | Base Substitution | 26647 | 24.72 | 31.00 | 31.52 | -0.52 | Before |
| REGRESSION.HCC1395_tumor.L006 | 26 | Cycle | Base Insertion | 26647 | 0.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 26 | Cycle | Base Deletion | 26647 | 1.83 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 27 | Cycle | Base Substitution | 26551 | 27.81 | 31.00 | 31.27 | -0.27 | Before |
| REGRESSION.HCC1395_tumor.L006 | 27 | Cycle | Base Insertion | 26551 | 0.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 27 | Cycle | Base Deletion | 26551 | 1.76 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 28 | Cycle | Base Substitution | 26664 | 34.50 | 30.00 | 31.77 | -1.77 | Before |
| REGRESSION.HCC1395_tumor.L006 | 28 | Cycle | Base Insertion | 26664 | 0.52 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 28 | Cycle | Base Deletion | 26664 | 1.61 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 29 | Cycle | Base Substitution | 26539 | 35.20 | 30.00 | 31.34 | -1.34 | Before |
| REGRESSION.HCC1395_tumor.L006 | 29 | Cycle | Base Insertion | 26539 | 0.52 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 29 | Cycle | Base Deletion | 26539 | 2.02 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 3 | Cycle | Base Substitution | 26892 | 47.06 | 30.00 | 31.07 | -1.07 | Before |
| REGRESSION.HCC1395_tumor.L006 | 30 | Cycle | Base Substitution | 26664 | 31.44 | 31.00 | 31.67 | -0.67 | Before |
| REGRESSION.HCC1395_tumor.L006 | 30 | Cycle | Base Insertion | 26662 | 0.62 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 30 | Cycle | Base Deletion | 26662 | 2.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 31 | Cycle | Base Substitution | 26670 | 29.21 | 31.00 | 32.11 | -1.11 | Before |
| REGRESSION.HCC1395_tumor.L006 | 31 | Cycle | Base Insertion | 26668 | 0.69 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 31 | Cycle | Base Deletion | 26668 | 1.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 32 | Cycle | Base Substitution | 26398 | 43.61 | 30.00 | 31.05 | -1.05 | Before |
| REGRESSION.HCC1395_tumor.L006 | 32 | Cycle | Base Insertion | 26396 | 1.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 32 | Cycle | Base Deletion | 26396 | 1.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 33 | Cycle | Base Substitution | 26477 | 28.67 | 31.00 | 31.50 | -0.50 | Before |
| REGRESSION.HCC1395_tumor.L006 | 33 | Cycle | Base Insertion | 26476 | 1.01 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 33 | Cycle | Base Deletion | 26476 | 1.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 34 | Cycle | Base Substitution | 26509 | 24.36 | 31.00 | 31.45 | -0.45 | Before |
| REGRESSION.HCC1395_tumor.L006 | 34 | Cycle | Base Insertion | 26509 | 0.85 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 34 | Cycle | Base Deletion | 26509 | 1.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 35 | Cycle | Base Substitution | 26484 | 29.82 | 31.00 | 31.73 | -0.73 | Before |
| REGRESSION.HCC1395_tumor.L006 | 35 | Cycle | Base Insertion | 26484 | 0.90 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 35 | Cycle | Base Deletion | 26484 | 1.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 36 | Cycle | Base Substitution | 26533 | 26.71 | 31.00 | 31.82 | -0.82 | Before |
| REGRESSION.HCC1395_tumor.L006 | 36 | Cycle | Base Insertion | 26533 | 0.78 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 36 | Cycle | Base Deletion | 26533 | 1.02 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 37 | Cycle | Base Substitution | 26475 | 23.25 | 31.00 | 31.90 | -0.90 | Before |
| REGRESSION.HCC1395_tumor.L006 | 37 | Cycle | Base Insertion | 26474 | 0.76 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 37 | Cycle | Base Deletion | 26474 | 1.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 38 | Cycle | Base Substitution | 26528 | 24.01 | 31.00 | 31.84 | -0.84 | Before |
| REGRESSION.HCC1395_tumor.L006 | 38 | Cycle | Base Insertion | 26526 | 1.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 38 | Cycle | Base Deletion | 26526 | 1.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 39 | Cycle | Base Substitution | 26461 | 25.33 | 31.00 | 31.90 | -0.90 | Before |
| REGRESSION.HCC1395_tumor.L006 | 39 | Cycle | Base Insertion | 26460 | 0.69 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 39 | Cycle | Base Deletion | 26460 | 1.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 4 | Cycle | Base Substitution | 26909 | 61.34 | 29.00 | 31.02 | -2.02 | Before |
| REGRESSION.HCC1395_tumor.L006 | 40 | Cycle | Base Substitution | 26388 | 20.94 | 31.00 | 31.66 | -0.66 | Before |
| REGRESSION.HCC1395_tumor.L006 | 40 | Cycle | Base Insertion | 26386 | 1.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 40 | Cycle | Base Deletion | 26386 | 1.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 41 | Cycle | Base Substitution | 26523 | 25.55 | 31.00 | 31.46 | -0.46 | Before |
| REGRESSION.HCC1395_tumor.L006 | 41 | Cycle | Base Insertion | 26520 | 0.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 41 | Cycle | Base Deletion | 26520 | 1.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 42 | Cycle | Base Substitution | 26302 | 28.27 | 31.00 | 31.51 | -0.51 | Before |
| REGRESSION.HCC1395_tumor.L006 | 42 | Cycle | Base Insertion | 26301 | 0.81 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 42 | Cycle | Base Deletion | 26301 | 1.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 43 | Cycle | Base Substitution | 26402 | 37.09 | 30.00 | 31.19 | -1.19 | Before |
| REGRESSION.HCC1395_tumor.L006 | 43 | Cycle | Base Insertion | 26401 | 0.61 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 43 | Cycle | Base Deletion | 26401 | 1.85 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 44 | Cycle | Base Substitution | 26406 | 28.79 | 31.00 | 31.49 | -0.49 | Before |
| REGRESSION.HCC1395_tumor.L006 | 44 | Cycle | Base Insertion | 26406 | 0.61 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 44 | Cycle | Base Deletion | 26406 | 1.61 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 45 | Cycle | Base Substitution | 26412 | 32.69 | 30.00 | 31.66 | -1.66 | Before |
| REGRESSION.HCC1395_tumor.L006 | 45 | Cycle | Base Insertion | 26410 | 0.86 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 45 | Cycle | Base Deletion | 26410 | 1.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 46 | Cycle | Base Substitution | 26338 | 39.48 | 30.00 | 31.34 | -1.34 | Before |
| REGRESSION.HCC1395_tumor.L006 | 46 | Cycle | Base Insertion | 26334 | 0.87 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 46 | Cycle | Base Deletion | 26334 | 1.03 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 47 | Cycle | Base Substitution | 26405 | 31.95 | 30.00 | 31.65 | -1.65 | Before |
| REGRESSION.HCC1395_tumor.L006 | 47 | Cycle | Base Insertion | 26398 | 0.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 47 | Cycle | Base Deletion | 26398 | 0.96 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 48 | Cycle | Base Substitution | 26349 | 26.06 | 31.00 | 31.61 | -0.61 | Before |
| REGRESSION.HCC1395_tumor.L006 | 48 | Cycle | Base Insertion | 26340 | 0.61 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 48 | Cycle | Base Deletion | 26340 | 1.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 49 | Cycle | Base Substitution | 26410 | 31.63 | 30.00 | 31.49 | -1.49 | Before |
| REGRESSION.HCC1395_tumor.L006 | 49 | Cycle | Base Insertion | 26404 | 0.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 49 | Cycle | Base Deletion | 26404 | 1.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 5 | Cycle | Base Substitution | 26824 | 42.10 | 30.00 | 31.30 | -1.30 | Before |
| REGRESSION.HCC1395_tumor.L006 | 5 | Cycle | Base Insertion | 26824 | 0.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 5 | Cycle | Base Deletion | 26824 | 0.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 50 | Cycle | Base Substitution | 26299 | 27.83 | 31.00 | 31.84 | -0.84 | Before |
| REGRESSION.HCC1395_tumor.L006 | 50 | Cycle | Base Insertion | 26289 | 0.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 50 | Cycle | Base Deletion | 26289 | 1.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 51 | Cycle | Base Substitution | 26291 | 51.10 | 30.00 | 31.64 | -1.64 | Before |
| REGRESSION.HCC1395_tumor.L006 | 51 | Cycle | Base Insertion | 26280 | 1.12 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 51 | Cycle | Base Deletion | 26280 | 1.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 52 | Cycle | Base Substitution | 26330 | 31.46 | 31.00 | 31.57 | -0.57 | Before |
| REGRESSION.HCC1395_tumor.L006 | 52 | Cycle | Base Insertion | 26313 | 1.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 52 | Cycle | Base Deletion | 26313 | 1.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 53 | Cycle | Base Substitution | 26384 | 35.85 | 30.00 | 31.14 | -1.14 | Before |
| REGRESSION.HCC1395_tumor.L006 | 53 | Cycle | Base Insertion | 26361 | 0.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 53 | Cycle | Base Deletion | 26361 | 1.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 54 | Cycle | Base Substitution | 26275 | 33.18 | 30.00 | 31.90 | -1.90 | Before |
| REGRESSION.HCC1395_tumor.L006 | 54 | Cycle | Base Insertion | 26247 | 1.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 54 | Cycle | Base Deletion | 26247 | 1.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 55 | Cycle | Base Substitution | 26280 | 28.10 | 31.00 | 31.71 | -0.71 | Before |
| REGRESSION.HCC1395_tumor.L006 | 55 | Cycle | Base Insertion | 26249 | 0.62 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 55 | Cycle | Base Deletion | 26249 | 0.87 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 56 | Cycle | Base Substitution | 26393 | 40.18 | 30.00 | 31.68 | -1.68 | Before |
| REGRESSION.HCC1395_tumor.L006 | 56 | Cycle | Base Insertion | 26354 | 0.69 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 56 | Cycle | Base Deletion | 26354 | 0.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 57 | Cycle | Base Substitution | 26184 | 36.09 | 30.00 | 31.26 | -1.26 | Before |
| REGRESSION.HCC1395_tumor.L006 | 57 | Cycle | Base Insertion | 26151 | 0.61 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 57 | Cycle | Base Deletion | 26151 | 0.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 58 | Cycle | Base Substitution | 26222 | 33.64 | 30.00 | 31.86 | -1.86 | Before |
| REGRESSION.HCC1395_tumor.L006 | 58 | Cycle | Base Insertion | 26188 | 0.73 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 58 | Cycle | Base Deletion | 26188 | 0.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 59 | Cycle | Base Substitution | 26348 | 32.81 | 30.00 | 31.39 | -1.39 | Before |
| REGRESSION.HCC1395_tumor.L006 | 59 | Cycle | Base Insertion | 26305 | 0.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 59 | Cycle | Base Deletion | 26305 | 0.82 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 6 | Cycle | Base Substitution | 26892 | 30.74 | 31.00 | 31.03 | -0.03 | Before |
| REGRESSION.HCC1395_tumor.L006 | 6 | Cycle | Base Insertion | 26892 | 0.09 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 6 | Cycle | Base Deletion | 26892 | 0.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 60 | Cycle | Base Substitution | 26152 | 30.92 | 31.00 | 31.15 | -0.15 | Before |
| REGRESSION.HCC1395_tumor.L006 | 60 | Cycle | Base Insertion | 26102 | 0.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 60 | Cycle | Base Deletion | 26102 | 0.77 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 61 | Cycle | Base Substitution | 26221 | 46.65 | 30.00 | 31.67 | -1.67 | Before |
| REGRESSION.HCC1395_tumor.L006 | 61 | Cycle | Base Insertion | 26163 | 0.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 61 | Cycle | Base Deletion | 26163 | 0.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 62 | Cycle | Base Substitution | 26199 | 33.47 | 30.00 | 31.45 | -1.45 | Before |
| REGRESSION.HCC1395_tumor.L006 | 62 | Cycle | Base Insertion | 26138 | 0.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 62 | Cycle | Base Deletion | 26138 | 0.61 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 63 | Cycle | Base Substitution | 26160 | 41.93 | 30.00 | 31.08 | -1.08 | Before |
| REGRESSION.HCC1395_tumor.L006 | 63 | Cycle | Base Insertion | 26093 | 0.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 63 | Cycle | Base Deletion | 26093 | 0.60 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 64 | Cycle | Base Substitution | 26170 | 32.46 | 30.00 | 31.47 | -1.47 | Before |
| REGRESSION.HCC1395_tumor.L006 | 64 | Cycle | Base Insertion | 26096 | 0.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 64 | Cycle | Base Deletion | 26096 | 1.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 65 | Cycle | Base Substitution | 26146 | 35.70 | 30.00 | 31.25 | -1.25 | Before |
| REGRESSION.HCC1395_tumor.L006 | 65 | Cycle | Base Insertion | 26080 | 0.52 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 65 | Cycle | Base Deletion | 26080 | 1.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 66 | Cycle | Base Substitution | 26114 | 27.84 | 31.00 | 31.61 | -0.61 | Before |
| REGRESSION.HCC1395_tumor.L006 | 66 | Cycle | Base Insertion | 26031 | 0.77 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 66 | Cycle | Base Deletion | 26031 | 1.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 67 | Cycle | Base Substitution | 26053 | 35.51 | 30.00 | 31.40 | -1.40 | Before |
| REGRESSION.HCC1395_tumor.L006 | 67 | Cycle | Base Insertion | 25969 | 0.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 67 | Cycle | Base Deletion | 25969 | 1.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 68 | Cycle | Base Substitution | 26083 | 33.78 | 30.00 | 31.19 | -1.19 | Before |
| REGRESSION.HCC1395_tumor.L006 | 68 | Cycle | Base Insertion | 25998 | 0.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 68 | Cycle | Base Deletion | 25998 | 1.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 69 | Cycle | Base Substitution | 26197 | 29.14 | 31.00 | 31.41 | -0.41 | Before |
| REGRESSION.HCC1395_tumor.L006 | 69 | Cycle | Base Insertion | 26112 | 0.60 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 69 | Cycle | Base Deletion | 26112 | 1.60 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 7 | Cycle | Base Substitution | 26703 | 28.37 | 31.00 | 31.13 | -0.13 | Before |
| REGRESSION.HCC1395_tumor.L006 | 7 | Cycle | Base Insertion | 26703 | 0.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 7 | Cycle | Base Deletion | 26703 | 0.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 70 | Cycle | Base Substitution | 25925 | 36.37 | 30.00 | 31.23 | -1.23 | Before |
| REGRESSION.HCC1395_tumor.L006 | 70 | Cycle | Base Insertion | 25840 | 0.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 70 | Cycle | Base Deletion | 25840 | 1.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 71 | Cycle | Base Substitution | 25951 | 35.01 | 30.00 | 31.87 | -1.87 | Before |
| REGRESSION.HCC1395_tumor.L006 | 71 | Cycle | Base Insertion | 25850 | 0.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 71 | Cycle | Base Deletion | 25850 | 1.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 72 | Cycle | Base Substitution | 25957 | 26.61 | 31.00 | 31.44 | -0.44 | Before |
| REGRESSION.HCC1395_tumor.L006 | 72 | Cycle | Base Insertion | 25854 | 0.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 72 | Cycle | Base Deletion | 25854 | 1.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 73 | Cycle | Base Substitution | 25950 | 40.67 | 29.00 | 31.00 | -2.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 73 | Cycle | Base Insertion | 25832 | 0.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 73 | Cycle | Base Deletion | 25832 | 1.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 74 | Cycle | Base Substitution | 25831 | 36.82 | 30.00 | 31.32 | -1.32 | Before |
| REGRESSION.HCC1395_tumor.L006 | 74 | Cycle | Base Insertion | 25706 | 0.60 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 74 | Cycle | Base Deletion | 25706 | 2.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 75 | Cycle | Base Substitution | 25866 | 35.00 | 30.00 | 31.14 | -1.14 | Before |
| REGRESSION.HCC1395_tumor.L006 | 75 | Cycle | Base Insertion | 25741 | 0.69 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 75 | Cycle | Base Deletion | 25741 | 1.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 76 | Cycle | Base Substitution | 25842 | 39.57 | 30.00 | 31.55 | -1.55 | Before |
| REGRESSION.HCC1395_tumor.L006 | 76 | Cycle | Base Insertion | 25711 | 0.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 76 | Cycle | Base Deletion | 25711 | 1.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 77 | Cycle | Base Substitution | 25730 | 37.42 | 30.00 | 31.07 | -1.07 | Before |
| REGRESSION.HCC1395_tumor.L006 | 77 | Cycle | Base Insertion | 25599 | 1.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 77 | Cycle | Base Deletion | 25599 | 1.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 78 | Cycle | Base Substitution | 25730 | 40.83 | 29.00 | 30.98 | -1.98 | Before |
| REGRESSION.HCC1395_tumor.L006 | 78 | Cycle | Base Insertion | 25585 | 0.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 78 | Cycle | Base Deletion | 25585 | 1.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 79 | Cycle | Base Substitution | 25734 | 51.77 | 30.00 | 31.09 | -1.09 | Before |
| REGRESSION.HCC1395_tumor.L006 | 79 | Cycle | Base Insertion | 25583 | 0.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 79 | Cycle | Base Deletion | 25583 | 1.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 8 | Cycle | Base Substitution | 26717 | 39.70 | 30.00 | 31.03 | -1.03 | Before |
| REGRESSION.HCC1395_tumor.L006 | 8 | Cycle | Base Insertion | 26717 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 8 | Cycle | Base Deletion | 26717 | 0.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 80 | Cycle | Base Substitution | 25718 | 30.85 | 30.00 | 31.02 | -1.02 | Before |
| REGRESSION.HCC1395_tumor.L006 | 80 | Cycle | Base Insertion | 25548 | 0.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 80 | Cycle | Base Deletion | 25548 | 1.01 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 81 | Cycle | Base Substitution | 25553 | 34.63 | 30.00 | 30.87 | -0.87 | Before |
| REGRESSION.HCC1395_tumor.L006 | 81 | Cycle | Base Insertion | 25375 | 0.92 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 81 | Cycle | Base Deletion | 25375 | 0.92 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 82 | Cycle | Base Substitution | 25596 | 32.08 | 30.00 | 31.00 | -1.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 82 | Cycle | Base Insertion | 25417 | 0.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 82 | Cycle | Base Deletion | 25417 | 1.09 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 83 | Cycle | Base Substitution | 25486 | 34.37 | 30.00 | 30.89 | -0.89 | Before |
| REGRESSION.HCC1395_tumor.L006 | 83 | Cycle | Base Insertion | 25288 | 0.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 83 | Cycle | Base Deletion | 25288 | 1.03 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 84 | Cycle | Base Substitution | 25514 | 45.13 | 29.00 | 30.96 | -1.96 | Before |
| REGRESSION.HCC1395_tumor.L006 | 84 | Cycle | Base Insertion | 25316 | 0.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 84 | Cycle | Base Deletion | 25316 | 1.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 85 | Cycle | Base Substitution | 25425 | 41.60 | 30.00 | 31.18 | -1.18 | Before |
| REGRESSION.HCC1395_tumor.L006 | 85 | Cycle | Base Insertion | 25233 | 0.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 85 | Cycle | Base Deletion | 25233 | 1.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 86 | Cycle | Base Substitution | 25415 | 39.24 | 30.00 | 31.13 | -1.13 | Before |
| REGRESSION.HCC1395_tumor.L006 | 86 | Cycle | Base Insertion | 25230 | 0.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 86 | Cycle | Base Deletion | 25230 | 1.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 87 | Cycle | Base Substitution | 25380 | 34.97 | 30.00 | 30.69 | -0.69 | Before |
| REGRESSION.HCC1395_tumor.L006 | 87 | Cycle | Base Insertion | 25185 | 0.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 87 | Cycle | Base Deletion | 25185 | 1.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 88 | Cycle | Base Substitution | 25277 | 34.81 | 30.00 | 30.84 | -0.84 | Before |
| REGRESSION.HCC1395_tumor.L006 | 88 | Cycle | Base Insertion | 25077 | 0.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 88 | Cycle | Base Deletion | 25077 | 1.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 89 | Cycle | Base Substitution | 25286 | 43.95 | 29.00 | 30.66 | -1.66 | Before |
| REGRESSION.HCC1395_tumor.L006 | 89 | Cycle | Base Insertion | 25080 | 0.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 89 | Cycle | Base Deletion | 25080 | 1.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 9 | Cycle | Base Substitution | 26771 | 35.57 | 30.00 | 30.93 | -0.93 | Before |
| REGRESSION.HCC1395_tumor.L006 | 9 | Cycle | Base Insertion | 26771 | 0.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 9 | Cycle | Base Deletion | 26771 | 0.65 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 90 | Cycle | Base Substitution | 25233 | 42.77 | 29.00 | 30.66 | -1.66 | Before |
| REGRESSION.HCC1395_tumor.L006 | 90 | Cycle | Base Insertion | 25029 | 0.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 90 | Cycle | Base Deletion | 25029 | 1.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 91 | Cycle | Base Substitution | 25282 | 45.89 | 29.00 | 30.78 | -1.78 | Before |
| REGRESSION.HCC1395_tumor.L006 | 91 | Cycle | Base Insertion | 25081 | 0.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 91 | Cycle | Base Deletion | 25081 | 1.21 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 92 | Cycle | Base Substitution | 25036 | 34.21 | 30.00 | 30.75 | -0.75 | Before |
| REGRESSION.HCC1395_tumor.L006 | 92 | Cycle | Base Insertion | 24812 | 0.65 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 92 | Cycle | Base Deletion | 24812 | 0.85 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 93 | Cycle | Base Substitution | 24881 | 41.94 | 29.00 | 30.87 | -1.87 | Before |
| REGRESSION.HCC1395_tumor.L006 | 93 | Cycle | Base Insertion | 24657 | 0.65 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 93 | Cycle | Base Deletion | 24657 | 0.96 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 94 | Cycle | Base Substitution | 25021 | 43.99 | 29.00 | 30.42 | -1.42 | Before |
| REGRESSION.HCC1395_tumor.L006 | 94 | Cycle | Base Insertion | 24787 | 0.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 94 | Cycle | Base Deletion | 24787 | 1.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 95 | Cycle | Base Substitution | 24850 | 26.68 | 30.00 | 30.91 | -0.91 | Before |
| REGRESSION.HCC1395_tumor.L006 | 95 | Cycle | Base Insertion | 24593 | 0.96 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 95 | Cycle | Base Deletion | 24593 | 1.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 96 | Cycle | Base Substitution | 24794 | 39.37 | 29.00 | 30.81 | -1.81 | Before |
| REGRESSION.HCC1395_tumor.L006 | 96 | Cycle | Base Insertion | 24536 | 0.98 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 96 | Cycle | Base Deletion | 24536 | 1.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 97 | Cycle | Base Substitution | 24775 | 39.86 | 29.00 | 30.62 | -1.62 | Before |
| REGRESSION.HCC1395_tumor.L006 | 97 | Cycle | Base Insertion | 24524 | 0.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 97 | Cycle | Base Deletion | 24524 | 1.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 98 | Cycle | Base Substitution | 24725 | 40.46 | 29.00 | 30.49 | -1.49 | Before |
| REGRESSION.HCC1395_tumor.L006 | 98 | Cycle | Base Insertion | 24481 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 98 | Cycle | Base Deletion | 24481 | 1.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 99 | Cycle | Base Substitution | 24681 | 45.63 | 29.00 | 30.56 | -1.56 | Before |
| REGRESSION.HCC1395_tumor.L006 | 99 | Cycle | Base Insertion | 24443 | 0.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 99 | Cycle | Base Deletion | 24443 | 1.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 12 | QualityScore | Base Substitution | 80107 | 7732.55 | 10.00 | 12.00 | -2.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 24 | QualityScore | Base Substitution | 196272 | 735.44 | 24.00 | 24.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 40 | QualityScore | Base Substitution | 7226980 | 5427.94 | 31.00 | 40.00 | -9.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 45 | QualityScore | Base Insertion | 7503359 | 127.44 | 47.00 | 45.00 | 2.00 | Before |
| REGRESSION.HCC1395_tumor.L006 | 45 | QualityScore | Base Deletion | 7503359 | 355.42 | 44.00 | 45.00 | -1.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | AA | Context | Base Substitution | 525729 | 1307.89 | 26.00 | 29.74 | -3.74 | Before |
| REGRESSION.HCC1395_tumor.L007 | AAA | Context | Base Insertion | 178084 | 22.53 | 44.00 | 45.00 | -1.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | AAA | Context | Base Deletion | 178084 | 64.31 | 42.00 | 45.00 | -3.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | AAC | Context | Base Insertion | 86227 | 0.75 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | AAC | Context | Base Deletion | 86227 | 1.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | AAG | Context | Base Insertion | 133741 | 1.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | AAG | Context | Base Deletion | 133741 | 4.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | AAT | Context | Base Insertion | 102304 | 0.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | AAT | Context | Base Deletion | 102304 | 1.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | AC | Context | Base Substitution | 358696 | 1194.15 | 25.00 | 28.60 | -3.60 | Before |
| REGRESSION.HCC1395_tumor.L007 | ACA | Context | Base Insertion | 132700 | 4.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | ACA | Context | Base Deletion | 132700 | 4.88 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | ACC | Context | Base Insertion | 105301 | 2.75 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | ACC | Context | Base Deletion | 105301 | 1.97 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | ACG | Context | Base Insertion | 20986 | 0.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | ACG | Context | Base Deletion | 20986 | 1.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | ACT | Context | Base Insertion | 105570 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | ACT | Context | Base Deletion | 105570 | 6.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | AG | Context | Base Substitution | 561597 | 583.96 | 30.00 | 31.82 | -1.82 | Before |
| REGRESSION.HCC1395_tumor.L007 | AGA | Context | Base Insertion | 151971 | 1.21 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | AGA | Context | Base Deletion | 151971 | 4.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | AGC | Context | Base Insertion | 140039 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | AGC | Context | Base Deletion | 140039 | 5.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | AGG | Context | Base Insertion | 163282 | 4.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | AGG | Context | Base Deletion | 163282 | 4.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | AGT | Context | Base Insertion | 102494 | 0.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | AGT | Context | Base Deletion | 102494 | 2.99 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | AT | Context | Base Substitution | 372161 | 465.78 | 29.00 | 32.09 | -3.09 | Before |
| REGRESSION.HCC1395_tumor.L007 | ATA | Context | Base Insertion | 75474 | 0.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | ATA | Context | Base Deletion | 75474 | 1.87 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | ATC | Context | Base Insertion | 79250 | 0.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | ATC | Context | Base Deletion | 79250 | 0.94 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | ATG | Context | Base Insertion | 115442 | 0.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | ATG | Context | Base Deletion | 115442 | 0.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | ATT | Context | Base Insertion | 110004 | 1.84 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | ATT | Context | Base Deletion | 110004 | 2.62 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | CA | Context | Base Substitution | 595135 | 1284.01 | 27.00 | 29.87 | -2.87 | Before |
| REGRESSION.HCC1395_tumor.L007 | CAA | Context | Base Insertion | 112411 | 1.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | CAA | Context | Base Deletion | 112411 | 3.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | CAC | Context | Base Insertion | 125115 | 4.88 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | CAC | Context | Base Deletion | 125115 | 4.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | CAG | Context | Base Insertion | 213537 | 3.73 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | CAG | Context | Base Deletion | 213537 | 10.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | CAT | Context | Base Insertion | 112025 | 0.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | CAT | Context | Base Deletion | 112025 | 1.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | CC | Context | Base Substitution | 552787 | 1734.77 | 25.00 | 28.90 | -3.90 | Before |
| REGRESSION.HCC1395_tumor.L007 | CCA | Context | Base Insertion | 176069 | 2.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | CCA | Context | Base Deletion | 176069 | 2.60 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | CCC | Context | Base Insertion | 151583 | 4.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | CCC | Context | Base Deletion | 151583 | 9.95 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | CCG | Context | Base Insertion | 38081 | 0.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | CCG | Context | Base Deletion | 38081 | 1.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | CCT | Context | Base Insertion | 178215 | 1.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | CCT | Context | Base Deletion | 178215 | 6.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | CG | Context | Base Substitution | 114960 | 346.41 | 26.00 | 29.88 | -3.88 | Before |
| REGRESSION.HCC1395_tumor.L007 | CGA | Context | Base Insertion | 44860 | 0.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | CGA | Context | Base Deletion | 44860 | 0.12 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | CGC | Context | Base Insertion | 64124 | 0.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | CGC | Context | Base Deletion | 64124 | 2.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | CGG | Context | Base Insertion | 78371 | 1.97 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | CGG | Context | Base Deletion | 78371 | 3.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | CGT | Context | Base Insertion | 49460 | 0.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | CGT | Context | Base Deletion | 49460 | 0.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | CT | Context | Base Substitution | 598434 | 410.78 | 32.00 | 32.56 | -0.56 | Before |
| REGRESSION.HCC1395_tumor.L007 | CTA | Context | Base Insertion | 58736 | 0.03 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | CTA | Context | Base Deletion | 58736 | 4.92 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | CTC | Context | Base Insertion | 147007 | 1.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | CTC | Context | Base Deletion | 147007 | 9.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | CTG | Context | Base Insertion | 214557 | 1.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | CTG | Context | Base Deletion | 214557 | 6.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | CTT | Context | Base Insertion | 146301 | 6.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | CTT | Context | Base Deletion | 146301 | 5.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | GA | Context | Base Substitution | 497444 | 843.78 | 28.00 | 29.55 | -1.55 | Before |
| REGRESSION.HCC1395_tumor.L007 | GAA | Context | Base Insertion | 142175 | 1.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | GAA | Context | Base Deletion | 142175 | 2.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | GAC | Context | Base Insertion | 84319 | 0.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | GAC | Context | Base Deletion | 84319 | 1.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | GAG | Context | Base Insertion | 149787 | 0.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | GAG | Context | Base Deletion | 149787 | 3.93 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | GAT | Context | Base Insertion | 83978 | 0.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | GAT | Context | Base Deletion | 83978 | 1.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | GC | Context | Base Substitution | 489127 | 1132.05 | 27.00 | 30.28 | -3.28 | Before |
| REGRESSION.HCC1395_tumor.L007 | GCA | Context | Base Insertion | 148621 | 3.02 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | GCA | Context | Base Deletion | 148621 | 2.90 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | GCC | Context | Base Insertion | 146740 | 0.92 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | GCC | Context | Base Deletion | 146740 | 7.01 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | GCG | Context | Base Insertion | 36682 | 0.65 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | GCG | Context | Base Deletion | 36682 | 2.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | GCT | Context | Base Insertion | 156315 | 2.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | GCT | Context | Base Deletion | 156315 | 2.01 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | GG | Context | Base Substitution | 578128 | 772.85 | 29.00 | 31.73 | -2.73 | Before |
| REGRESSION.HCC1395_tumor.L007 | GGA | Context | Base Insertion | 156695 | 1.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | GGA | Context | Base Deletion | 156695 | 5.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | GGC | Context | Base Insertion | 145030 | 0.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | GGC | Context | Base Deletion | 145030 | 4.99 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | GGG | Context | Base Insertion | 158506 | 6.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | GGG | Context | Base Deletion | 158506 | 9.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | GGT | Context | Base Insertion | 115600 | 1.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | GGT | Context | Base Deletion | 115600 | 1.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | GT | Context | Base Substitution | 409079 | 674.72 | 28.00 | 32.11 | -4.11 | Before |
| REGRESSION.HCC1395_tumor.L007 | GTA | Context | Base Insertion | 66402 | 1.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | GTA | Context | Base Deletion | 66402 | 0.97 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | GTC | Context | Base Insertion | 91462 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | GTC | Context | Base Deletion | 91462 | 0.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | GTG | Context | Base Insertion | 140186 | 3.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | GTG | Context | Base Deletion | 140186 | 4.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | GTT | Context | Base Insertion | 100240 | 0.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | GTT | Context | Base Deletion | 100240 | 1.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | TA | Context | Base Substitution | 290906 | 834.66 | 26.00 | 29.70 | -3.70 | Before |
| REGRESSION.HCC1395_tumor.L007 | TAA | Context | Base Insertion | 88605 | 2.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | TAA | Context | Base Deletion | 88605 | 4.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | TAC | Context | Base Insertion | 60677 | 0.01 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | TAC | Context | Base Deletion | 60677 | 4.76 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | TAG | Context | Base Insertion | 60244 | 0.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | TAG | Context | Base Deletion | 60244 | 0.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | TAT | Context | Base Insertion | 71097 | 0.03 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | TAT | Context | Base Deletion | 71097 | 1.02 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | TC | Context | Base Substitution | 451210 | 1010.94 | 27.00 | 30.48 | -3.48 | Before |
| REGRESSION.HCC1395_tumor.L007 | TCA | Context | Base Insertion | 133050 | 2.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | TCA | Context | Base Deletion | 133050 | 5.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | TCC | Context | Base Insertion | 145428 | 0.66 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | TCC | Context | Base Deletion | 145428 | 2.90 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | TCG | Context | Base Insertion | 18366 | 0.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | TCG | Context | Base Deletion | 18366 | 0.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | TCT | Context | Base Insertion | 154350 | 2.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | TCT | Context | Base Deletion | 154350 | 9.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | TG | Context | Base Substitution | 588327 | 459.49 | 31.00 | 31.82 | -0.82 | Before |
| REGRESSION.HCC1395_tumor.L007 | TGA | Context | Base Insertion | 140049 | 0.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | TGA | Context | Base Deletion | 140049 | 1.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | TGC | Context | Base Insertion | 136803 | 0.83 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | TGC | Context | Base Deletion | 136803 | 1.57 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | TGG | Context | Base Insertion | 173603 | 0.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | TGG | Context | Base Deletion | 173603 | 2.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | TGT | Context | Base Insertion | 138732 | 2.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | TGT | Context | Base Deletion | 138732 | 4.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | TT | Context | Base Substitution | 540859 | 685.29 | 29.00 | 32.96 | -3.96 | Before |
| REGRESSION.HCC1395_tumor.L007 | TTA | Context | Base Insertion | 88052 | 3.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | TTA | Context | Base Deletion | 88052 | 3.76 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | TTC | Context | Base Insertion | 130832 | 1.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | TTC | Context | Base Deletion | 130832 | 5.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | TTG | Context | Base Insertion | 113873 | 0.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | TTG | Context | Base Deletion | 113873 | 2.73 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | TTT | Context | Base Insertion | 180677 | 19.17 | 44.00 | 45.00 | -1.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | TTT | Context | Base Deletion | 180677 | 58.44 | 42.00 | 45.00 | -3.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -1 | Cycle | Base Substitution | 26794 | 97.87 | 25.00 | 25.85 | -0.85 | Before |
| REGRESSION.HCC1395_tumor.L007 | -10 | Cycle | Base Substitution | 27066 | 41.09 | 30.00 | 31.28 | -1.28 | Before |
| REGRESSION.HCC1395_tumor.L007 | -10 | Cycle | Base Insertion | 27066 | 1.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -10 | Cycle | Base Deletion | 27066 | 0.69 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -100 | Cycle | Base Substitution | 24965 | 34.68 | 30.00 | 30.34 | -0.34 | Before |
| REGRESSION.HCC1395_tumor.L007 | -100 | Cycle | Base Insertion | 24717 | 0.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -100 | Cycle | Base Deletion | 24717 | 1.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -101 | Cycle | Base Substitution | 24790 | 47.31 | 28.00 | 29.99 | -1.99 | Before |
| REGRESSION.HCC1395_tumor.L007 | -101 | Cycle | Base Insertion | 24544 | 0.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -101 | Cycle | Base Deletion | 24544 | 1.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -102 | Cycle | Base Substitution | 24840 | 39.81 | 29.00 | 30.20 | -1.20 | Before |
| REGRESSION.HCC1395_tumor.L007 | -102 | Cycle | Base Insertion | 24579 | 0.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -102 | Cycle | Base Deletion | 24579 | 1.80 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -103 | Cycle | Base Substitution | 24752 | 43.34 | 28.00 | 29.86 | -1.86 | Before |
| REGRESSION.HCC1395_tumor.L007 | -103 | Cycle | Base Insertion | 24513 | 0.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -103 | Cycle | Base Deletion | 24513 | 1.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -104 | Cycle | Base Substitution | 24806 | 33.96 | 30.00 | 30.45 | -0.45 | Before |
| REGRESSION.HCC1395_tumor.L007 | -104 | Cycle | Base Insertion | 24538 | 0.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -104 | Cycle | Base Deletion | 24538 | 1.52 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -105 | Cycle | Base Substitution | 24659 | 46.01 | 29.00 | 30.32 | -1.32 | Before |
| REGRESSION.HCC1395_tumor.L007 | -105 | Cycle | Base Insertion | 24378 | 0.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -105 | Cycle | Base Deletion | 24378 | 1.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -106 | Cycle | Base Substitution | 24577 | 44.67 | 29.00 | 30.27 | -1.27 | Before |
| REGRESSION.HCC1395_tumor.L007 | -106 | Cycle | Base Insertion | 24288 | 1.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -106 | Cycle | Base Deletion | 24288 | 1.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -107 | Cycle | Base Substitution | 24547 | 30.95 | 30.00 | 30.31 | -0.31 | Before |
| REGRESSION.HCC1395_tumor.L007 | -107 | Cycle | Base Insertion | 24252 | 0.93 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -107 | Cycle | Base Deletion | 24252 | 1.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -108 | Cycle | Base Substitution | 24520 | 34.50 | 30.00 | 30.29 | -0.29 | Before |
| REGRESSION.HCC1395_tumor.L007 | -108 | Cycle | Base Insertion | 24237 | 0.79 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -108 | Cycle | Base Deletion | 24237 | 1.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -109 | Cycle | Base Substitution | 24392 | 45.47 | 29.00 | 30.13 | -1.13 | Before |
| REGRESSION.HCC1395_tumor.L007 | -109 | Cycle | Base Insertion | 24107 | 1.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -109 | Cycle | Base Deletion | 24107 | 1.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -11 | Cycle | Base Substitution | 26970 | 39.48 | 30.00 | 31.63 | -1.63 | Before |
| REGRESSION.HCC1395_tumor.L007 | -11 | Cycle | Base Insertion | 26970 | 0.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -11 | Cycle | Base Deletion | 26970 | 0.69 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -110 | Cycle | Base Substitution | 24322 | 40.38 | 29.00 | 30.22 | -1.22 | Before |
| REGRESSION.HCC1395_tumor.L007 | -110 | Cycle | Base Insertion | 24050 | 0.91 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -110 | Cycle | Base Deletion | 24050 | 1.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -111 | Cycle | Base Substitution | 24212 | 37.64 | 29.00 | 30.03 | -1.03 | Before |
| REGRESSION.HCC1395_tumor.L007 | -111 | Cycle | Base Insertion | 23943 | 0.94 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -111 | Cycle | Base Deletion | 23943 | 0.90 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -112 | Cycle | Base Substitution | 24284 | 43.53 | 28.00 | 29.86 | -1.86 | Before |
| REGRESSION.HCC1395_tumor.L007 | -112 | Cycle | Base Insertion | 24001 | 0.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -112 | Cycle | Base Deletion | 24001 | 0.77 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -113 | Cycle | Base Substitution | 24189 | 54.15 | 29.00 | 30.10 | -1.10 | Before |
| REGRESSION.HCC1395_tumor.L007 | -113 | Cycle | Base Insertion | 23910 | 0.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -113 | Cycle | Base Deletion | 23910 | 0.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -114 | Cycle | Base Substitution | 24120 | 53.16 | 29.00 | 30.16 | -1.16 | Before |
| REGRESSION.HCC1395_tumor.L007 | -114 | Cycle | Base Insertion | 23834 | 0.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -114 | Cycle | Base Deletion | 23834 | 0.67 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -115 | Cycle | Base Substitution | 24013 | 51.94 | 29.00 | 30.17 | -1.17 | Before |
| REGRESSION.HCC1395_tumor.L007 | -115 | Cycle | Base Insertion | 23713 | 1.69 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -115 | Cycle | Base Deletion | 23713 | 0.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -116 | Cycle | Base Substitution | 23945 | 45.56 | 29.00 | 30.18 | -1.18 | Before |
| REGRESSION.HCC1395_tumor.L007 | -116 | Cycle | Base Insertion | 23646 | 0.57 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -116 | Cycle | Base Deletion | 23646 | 1.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -117 | Cycle | Base Substitution | 23765 | 53.53 | 28.00 | 29.83 | -1.83 | Before |
| REGRESSION.HCC1395_tumor.L007 | -117 | Cycle | Base Insertion | 23485 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -117 | Cycle | Base Deletion | 23485 | 0.89 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -118 | Cycle | Base Substitution | 23741 | 51.19 | 28.00 | 29.74 | -1.74 | Before |
| REGRESSION.HCC1395_tumor.L007 | -118 | Cycle | Base Insertion | 23440 | 0.03 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -118 | Cycle | Base Deletion | 23440 | 1.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -119 | Cycle | Base Substitution | 23662 | 58.22 | 28.00 | 29.95 | -1.95 | Before |
| REGRESSION.HCC1395_tumor.L007 | -119 | Cycle | Base Insertion | 23385 | 0.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -119 | Cycle | Base Deletion | 23385 | 1.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -12 | Cycle | Base Substitution | 27095 | 34.27 | 30.00 | 31.84 | -1.84 | Before |
| REGRESSION.HCC1395_tumor.L007 | -12 | Cycle | Base Insertion | 27095 | 0.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -12 | Cycle | Base Deletion | 27095 | 0.91 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -120 | Cycle | Base Substitution | 23613 | 57.94 | 28.00 | 29.93 | -1.93 | Before |
| REGRESSION.HCC1395_tumor.L007 | -120 | Cycle | Base Insertion | 23323 | 0.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -120 | Cycle | Base Deletion | 23323 | 1.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -121 | Cycle | Base Substitution | 23415 | 51.94 | 28.00 | 29.88 | -1.88 | Before |
| REGRESSION.HCC1395_tumor.L007 | -121 | Cycle | Base Insertion | 23114 | 0.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -121 | Cycle | Base Deletion | 23114 | 1.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -122 | Cycle | Base Substitution | 23528 | 44.35 | 28.00 | 29.89 | -1.89 | Before |
| REGRESSION.HCC1395_tumor.L007 | -122 | Cycle | Base Insertion | 23235 | 0.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -122 | Cycle | Base Deletion | 23235 | 1.57 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -123 | Cycle | Base Substitution | 23533 | 45.35 | 28.00 | 29.75 | -1.75 | Before |
| REGRESSION.HCC1395_tumor.L007 | -123 | Cycle | Base Insertion | 23216 | 0.09 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -123 | Cycle | Base Deletion | 23216 | 1.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -124 | Cycle | Base Substitution | 23434 | 45.15 | 28.00 | 29.86 | -1.86 | Before |
| REGRESSION.HCC1395_tumor.L007 | -124 | Cycle | Base Insertion | 23115 | 0.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -124 | Cycle | Base Deletion | 23115 | 1.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -125 | Cycle | Base Substitution | 23273 | 38.91 | 29.00 | 30.23 | -1.23 | Before |
| REGRESSION.HCC1395_tumor.L007 | -125 | Cycle | Base Insertion | 22963 | 0.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -125 | Cycle | Base Deletion | 22963 | 0.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -126 | Cycle | Base Substitution | 23239 | 43.90 | 29.00 | 30.13 | -1.13 | Before |
| REGRESSION.HCC1395_tumor.L007 | -126 | Cycle | Base Insertion | 22942 | 0.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -126 | Cycle | Base Deletion | 22942 | 0.74 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -127 | Cycle | Base Substitution | 23180 | 56.00 | 28.00 | 29.82 | -1.82 | Before |
| REGRESSION.HCC1395_tumor.L007 | -127 | Cycle | Base Insertion | 22865 | 0.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -127 | Cycle | Base Deletion | 22865 | 0.81 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -128 | Cycle | Base Substitution | 23176 | 43.83 | 28.00 | 29.65 | -1.65 | Before |
| REGRESSION.HCC1395_tumor.L007 | -128 | Cycle | Base Insertion | 22866 | 0.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -128 | Cycle | Base Deletion | 22866 | 0.81 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -129 | Cycle | Base Substitution | 23058 | 35.73 | 29.00 | 29.93 | -0.93 | Before |
| REGRESSION.HCC1395_tumor.L007 | -129 | Cycle | Base Insertion | 22735 | 0.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -129 | Cycle | Base Deletion | 22735 | 0.86 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -13 | Cycle | Base Substitution | 26959 | 41.43 | 30.00 | 31.34 | -1.34 | Before |
| REGRESSION.HCC1395_tumor.L007 | -13 | Cycle | Base Insertion | 26959 | 0.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -13 | Cycle | Base Deletion | 26959 | 0.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -130 | Cycle | Base Substitution | 23001 | 55.71 | 28.00 | 29.74 | -1.74 | Before |
| REGRESSION.HCC1395_tumor.L007 | -130 | Cycle | Base Insertion | 22661 | 0.80 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -130 | Cycle | Base Deletion | 22661 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -131 | Cycle | Base Substitution | 23024 | 43.78 | 28.00 | 29.81 | -1.81 | Before |
| REGRESSION.HCC1395_tumor.L007 | -131 | Cycle | Base Insertion | 22676 | 0.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -131 | Cycle | Base Deletion | 22676 | 0.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -132 | Cycle | Base Substitution | 22852 | 43.02 | 28.00 | 29.72 | -1.72 | Before |
| REGRESSION.HCC1395_tumor.L007 | -132 | Cycle | Base Insertion | 22503 | 0.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -132 | Cycle | Base Deletion | 22503 | 0.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -133 | Cycle | Base Substitution | 22870 | 43.91 | 28.00 | 29.60 | -1.60 | Before |
| REGRESSION.HCC1395_tumor.L007 | -133 | Cycle | Base Insertion | 22543 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -133 | Cycle | Base Deletion | 22543 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -134 | Cycle | Base Substitution | 22718 | 47.03 | 29.00 | 30.03 | -1.03 | Before |
| REGRESSION.HCC1395_tumor.L007 | -134 | Cycle | Base Insertion | 22376 | 0.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -134 | Cycle | Base Deletion | 22376 | 0.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -135 | Cycle | Base Substitution | 22669 | 44.02 | 28.00 | 29.68 | -1.68 | Before |
| REGRESSION.HCC1395_tumor.L007 | -135 | Cycle | Base Insertion | 22350 | 0.12 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -135 | Cycle | Base Deletion | 22350 | 0.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -136 | Cycle | Base Substitution | 22562 | 46.08 | 28.00 | 29.68 | -1.68 | Before |
| REGRESSION.HCC1395_tumor.L007 | -136 | Cycle | Base Insertion | 22231 | 0.65 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -136 | Cycle | Base Deletion | 22231 | 0.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -137 | Cycle | Base Substitution | 22513 | 52.13 | 28.00 | 29.98 | -1.98 | Before |
| REGRESSION.HCC1395_tumor.L007 | -137 | Cycle | Base Insertion | 22172 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -137 | Cycle | Base Deletion | 22172 | 0.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -138 | Cycle | Base Substitution | 22440 | 41.35 | 28.00 | 29.92 | -1.92 | Before |
| REGRESSION.HCC1395_tumor.L007 | -138 | Cycle | Base Insertion | 22104 | 0.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -138 | Cycle | Base Deletion | 22104 | 0.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -139 | Cycle | Base Substitution | 22275 | 40.23 | 28.00 | 29.88 | -1.88 | Before |
| REGRESSION.HCC1395_tumor.L007 | -139 | Cycle | Base Insertion | 21910 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -139 | Cycle | Base Deletion | 21910 | 0.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -14 | Cycle | Base Substitution | 26998 | 53.75 | 30.00 | 31.50 | -1.50 | Before |
| REGRESSION.HCC1395_tumor.L007 | -14 | Cycle | Base Insertion | 26998 | 0.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -14 | Cycle | Base Deletion | 26998 | 0.88 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -140 | Cycle | Base Substitution | 22241 | 47.07 | 28.00 | 29.66 | -1.66 | Before |
| REGRESSION.HCC1395_tumor.L007 | -140 | Cycle | Base Insertion | 21883 | 0.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -140 | Cycle | Base Deletion | 21883 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -141 | Cycle | Base Substitution | 22260 | 40.26 | 28.00 | 29.65 | -1.65 | Before |
| REGRESSION.HCC1395_tumor.L007 | -141 | Cycle | Base Insertion | 21891 | 0.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -141 | Cycle | Base Deletion | 21891 | 0.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -142 | Cycle | Base Substitution | 22102 | 37.73 | 29.00 | 29.88 | -0.88 | Before |
| REGRESSION.HCC1395_tumor.L007 | -142 | Cycle | Base Insertion | 21705 | 0.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -142 | Cycle | Base Deletion | 21705 | 0.69 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -143 | Cycle | Base Substitution | 21961 | 29.04 | 29.00 | 29.77 | -0.77 | Before |
| REGRESSION.HCC1395_tumor.L007 | -143 | Cycle | Base Insertion | 21548 | 0.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -143 | Cycle | Base Deletion | 21548 | 0.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -144 | Cycle | Base Substitution | 21959 | 29.34 | 29.00 | 29.57 | -0.57 | Before |
| REGRESSION.HCC1395_tumor.L007 | -144 | Cycle | Base Insertion | 21485 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -144 | Cycle | Base Deletion | 21485 | 0.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -145 | Cycle | Base Substitution | 21849 | 41.62 | 28.00 | 29.96 | -1.96 | Before |
| REGRESSION.HCC1395_tumor.L007 | -145 | Cycle | Base Insertion | 16823 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -145 | Cycle | Base Deletion | 16823 | 0.21 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -146 | Cycle | Base Substitution | 21639 | 67.53 | 28.00 | 30.10 | -2.10 | Before |
| REGRESSION.HCC1395_tumor.L007 | -146 | Cycle | Base Insertion | 16677 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -146 | Cycle | Base Deletion | 16677 | 0.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -147 | Cycle | Base Substitution | 21643 | 232.47 | 23.00 | 29.88 | -6.88 | Before |
| REGRESSION.HCC1395_tumor.L007 | -148 | Cycle | Base Substitution | 21501 | 824.53 | 16.00 | 29.87 | -13.87 | Before |
| REGRESSION.HCC1395_tumor.L007 | -149 | Cycle | Base Substitution | 13325 | 753.04 | 14.00 | 30.68 | -16.68 | Before |
| REGRESSION.HCC1395_tumor.L007 | -15 | Cycle | Base Substitution | 27007 | 41.60 | 30.00 | 31.53 | -1.53 | Before |
| REGRESSION.HCC1395_tumor.L007 | -15 | Cycle | Base Insertion | 27007 | 0.52 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -15 | Cycle | Base Deletion | 27007 | 1.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -150 | Cycle | Base Substitution | 4705 | 7.61 | 30.00 | 30.68 | -0.68 | Before |
| REGRESSION.HCC1395_tumor.L007 | -16 | Cycle | Base Substitution | 27094 | 39.00 | 30.00 | 31.60 | -1.60 | Before |
| REGRESSION.HCC1395_tumor.L007 | -16 | Cycle | Base Insertion | 27094 | 0.52 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -16 | Cycle | Base Deletion | 27094 | 1.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -17 | Cycle | Base Substitution | 27004 | 43.58 | 30.00 | 31.99 | -1.99 | Before |
| REGRESSION.HCC1395_tumor.L007 | -17 | Cycle | Base Insertion | 27004 | 0.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -17 | Cycle | Base Deletion | 27004 | 1.21 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -18 | Cycle | Base Substitution | 27053 | 36.16 | 30.00 | 31.85 | -1.85 | Before |
| REGRESSION.HCC1395_tumor.L007 | -18 | Cycle | Base Insertion | 27053 | 0.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -18 | Cycle | Base Deletion | 27053 | 1.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -19 | Cycle | Base Substitution | 27095 | 46.52 | 30.00 | 31.35 | -1.35 | Before |
| REGRESSION.HCC1395_tumor.L007 | -19 | Cycle | Base Insertion | 27095 | 0.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -19 | Cycle | Base Deletion | 27095 | 1.03 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -2 | Cycle | Base Substitution | 27047 | 70.41 | 27.00 | 28.67 | -1.67 | Before |
| REGRESSION.HCC1395_tumor.L007 | -20 | Cycle | Base Substitution | 27031 | 35.42 | 31.00 | 32.02 | -1.02 | Before |
| REGRESSION.HCC1395_tumor.L007 | -20 | Cycle | Base Insertion | 27031 | 0.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -20 | Cycle | Base Deletion | 27031 | 1.09 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -21 | Cycle | Base Substitution | 26901 | 37.14 | 30.00 | 31.96 | -1.96 | Before |
| REGRESSION.HCC1395_tumor.L007 | -21 | Cycle | Base Insertion | 26901 | 1.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -21 | Cycle | Base Deletion | 26901 | 1.07 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -22 | Cycle | Base Substitution | 26924 | 33.99 | 30.00 | 31.94 | -1.94 | Before |
| REGRESSION.HCC1395_tumor.L007 | -22 | Cycle | Base Insertion | 26924 | 0.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -22 | Cycle | Base Deletion | 26924 | 1.02 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -23 | Cycle | Base Substitution | 27047 | 39.69 | 30.00 | 31.62 | -1.62 | Before |
| REGRESSION.HCC1395_tumor.L007 | -23 | Cycle | Base Insertion | 27047 | 0.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -23 | Cycle | Base Deletion | 27047 | 0.85 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -24 | Cycle | Base Substitution | 26879 | 35.38 | 30.00 | 31.70 | -1.70 | Before |
| REGRESSION.HCC1395_tumor.L007 | -24 | Cycle | Base Insertion | 26879 | 0.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -24 | Cycle | Base Deletion | 26879 | 0.90 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -25 | Cycle | Base Substitution | 26944 | 41.04 | 30.00 | 31.37 | -1.37 | Before |
| REGRESSION.HCC1395_tumor.L007 | -25 | Cycle | Base Insertion | 26944 | 0.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -25 | Cycle | Base Deletion | 26944 | 1.12 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -26 | Cycle | Base Substitution | 26868 | 46.02 | 28.00 | 29.91 | -1.91 | Before |
| REGRESSION.HCC1395_tumor.L007 | -26 | Cycle | Base Insertion | 26868 | 0.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -26 | Cycle | Base Deletion | 26868 | 0.99 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -27 | Cycle | Base Substitution | 26892 | 39.82 | 29.00 | 29.97 | -0.97 | Before |
| REGRESSION.HCC1395_tumor.L007 | -27 | Cycle | Base Insertion | 26891 | 0.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -27 | Cycle | Base Deletion | 26891 | 0.75 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -28 | Cycle | Base Substitution | 26832 | 44.19 | 29.00 | 30.16 | -1.16 | Before |
| REGRESSION.HCC1395_tumor.L007 | -28 | Cycle | Base Insertion | 26830 | 0.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -28 | Cycle | Base Deletion | 26830 | 0.78 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -29 | Cycle | Base Substitution | 27013 | 35.70 | 30.00 | 30.25 | -0.25 | Before |
| REGRESSION.HCC1395_tumor.L007 | -29 | Cycle | Base Insertion | 27010 | 0.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -29 | Cycle | Base Deletion | 27010 | 1.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -3 | Cycle | Base Substitution | 27194 | 67.89 | 28.00 | 29.77 | -1.77 | Before |
| REGRESSION.HCC1395_tumor.L007 | -30 | Cycle | Base Substitution | 26835 | 40.47 | 29.00 | 30.20 | -1.20 | Before |
| REGRESSION.HCC1395_tumor.L007 | -30 | Cycle | Base Insertion | 26831 | 0.21 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -30 | Cycle | Base Deletion | 26831 | 1.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -31 | Cycle | Base Substitution | 26736 | 44.85 | 29.00 | 30.03 | -1.03 | Before |
| REGRESSION.HCC1395_tumor.L007 | -31 | Cycle | Base Insertion | 26732 | 0.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -31 | Cycle | Base Deletion | 26732 | 1.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -32 | Cycle | Base Substitution | 26815 | 31.81 | 30.00 | 30.50 | -0.50 | Before |
| REGRESSION.HCC1395_tumor.L007 | -32 | Cycle | Base Insertion | 26812 | 0.74 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -32 | Cycle | Base Deletion | 26812 | 2.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -33 | Cycle | Base Substitution | 26857 | 48.42 | 29.00 | 30.71 | -1.71 | Before |
| REGRESSION.HCC1395_tumor.L007 | -33 | Cycle | Base Insertion | 26854 | 1.03 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -33 | Cycle | Base Deletion | 26854 | 2.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -34 | Cycle | Base Substitution | 26807 | 29.64 | 30.00 | 30.37 | -0.37 | Before |
| REGRESSION.HCC1395_tumor.L007 | -34 | Cycle | Base Insertion | 26806 | 0.60 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -34 | Cycle | Base Deletion | 26806 | 1.76 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -35 | Cycle | Base Substitution | 26889 | 44.01 | 29.00 | 30.30 | -1.30 | Before |
| REGRESSION.HCC1395_tumor.L007 | -35 | Cycle | Base Insertion | 26888 | 0.84 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -35 | Cycle | Base Deletion | 26888 | 1.81 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -36 | Cycle | Base Substitution | 26928 | 36.60 | 30.00 | 30.15 | -0.15 | Before |
| REGRESSION.HCC1395_tumor.L007 | -36 | Cycle | Base Insertion | 26926 | 0.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -36 | Cycle | Base Deletion | 26926 | 1.91 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -37 | Cycle | Base Substitution | 26860 | 36.28 | 30.00 | 30.45 | -0.45 | Before |
| REGRESSION.HCC1395_tumor.L007 | -37 | Cycle | Base Insertion | 26859 | 0.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -37 | Cycle | Base Deletion | 26859 | 2.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -38 | Cycle | Base Substitution | 26767 | 44.65 | 29.00 | 30.23 | -1.23 | Before |
| REGRESSION.HCC1395_tumor.L007 | -38 | Cycle | Base Insertion | 26765 | 0.57 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -38 | Cycle | Base Deletion | 26765 | 1.91 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -39 | Cycle | Base Substitution | 26821 | 40.00 | 29.00 | 30.38 | -1.38 | Before |
| REGRESSION.HCC1395_tumor.L007 | -39 | Cycle | Base Insertion | 26819 | 0.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -39 | Cycle | Base Deletion | 26819 | 1.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -4 | Cycle | Base Substitution | 27106 | 81.12 | 27.00 | 29.93 | -2.93 | Before |
| REGRESSION.HCC1395_tumor.L007 | -40 | Cycle | Base Substitution | 26789 | 30.93 | 30.00 | 30.29 | -0.29 | Before |
| REGRESSION.HCC1395_tumor.L007 | -40 | Cycle | Base Insertion | 26787 | 0.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -40 | Cycle | Base Deletion | 26787 | 1.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -41 | Cycle | Base Substitution | 26823 | 30.76 | 30.00 | 30.40 | -0.40 | Before |
| REGRESSION.HCC1395_tumor.L007 | -41 | Cycle | Base Insertion | 26820 | 0.92 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -41 | Cycle | Base Deletion | 26820 | 1.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -42 | Cycle | Base Substitution | 26867 | 29.90 | 30.00 | 30.51 | -0.51 | Before |
| REGRESSION.HCC1395_tumor.L007 | -42 | Cycle | Base Insertion | 26863 | 0.76 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -42 | Cycle | Base Deletion | 26863 | 1.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -43 | Cycle | Base Substitution | 26743 | 47.84 | 29.00 | 30.18 | -1.18 | Before |
| REGRESSION.HCC1395_tumor.L007 | -43 | Cycle | Base Insertion | 26737 | 0.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -43 | Cycle | Base Deletion | 26737 | 1.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -44 | Cycle | Base Substitution | 26826 | 30.03 | 30.00 | 30.59 | -0.59 | Before |
| REGRESSION.HCC1395_tumor.L007 | -44 | Cycle | Base Insertion | 26824 | 0.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -44 | Cycle | Base Deletion | 26824 | 1.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -45 | Cycle | Base Substitution | 26781 | 36.06 | 30.00 | 30.37 | -0.37 | Before |
| REGRESSION.HCC1395_tumor.L007 | -45 | Cycle | Base Insertion | 26774 | 0.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -45 | Cycle | Base Deletion | 26774 | 1.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -46 | Cycle | Base Substitution | 26761 | 36.92 | 30.00 | 30.13 | -0.13 | Before |
| REGRESSION.HCC1395_tumor.L007 | -46 | Cycle | Base Insertion | 26756 | 0.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -46 | Cycle | Base Deletion | 26756 | 1.04 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -47 | Cycle | Base Substitution | 26786 | 43.43 | 29.00 | 30.57 | -1.57 | Before |
| REGRESSION.HCC1395_tumor.L007 | -47 | Cycle | Base Insertion | 26778 | 0.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -47 | Cycle | Base Deletion | 26778 | 1.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -48 | Cycle | Base Substitution | 26748 | 39.86 | 29.00 | 30.27 | -1.27 | Before |
| REGRESSION.HCC1395_tumor.L007 | -48 | Cycle | Base Insertion | 26737 | 0.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -48 | Cycle | Base Deletion | 26737 | 1.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -49 | Cycle | Base Substitution | 26674 | 33.84 | 30.00 | 30.58 | -0.58 | Before |
| REGRESSION.HCC1395_tumor.L007 | -49 | Cycle | Base Insertion | 26666 | 0.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -49 | Cycle | Base Deletion | 26666 | 1.07 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -5 | Cycle | Base Substitution | 27231 | 47.51 | 29.00 | 30.69 | -1.69 | Before |
| REGRESSION.HCC1395_tumor.L007 | -5 | Cycle | Base Insertion | 27231 | 0.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -5 | Cycle | Base Deletion | 27231 | 0.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -50 | Cycle | Base Substitution | 26722 | 37.99 | 29.00 | 30.62 | -1.62 | Before |
| REGRESSION.HCC1395_tumor.L007 | -50 | Cycle | Base Insertion | 26704 | 0.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -50 | Cycle | Base Deletion | 26704 | 1.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -51 | Cycle | Base Substitution | 26691 | 43.56 | 29.00 | 30.55 | -1.55 | Before |
| REGRESSION.HCC1395_tumor.L007 | -51 | Cycle | Base Insertion | 26668 | 1.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -51 | Cycle | Base Deletion | 26668 | 1.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -52 | Cycle | Base Substitution | 26533 | 39.47 | 29.00 | 30.44 | -1.44 | Before |
| REGRESSION.HCC1395_tumor.L007 | -52 | Cycle | Base Insertion | 26507 | 0.57 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -52 | Cycle | Base Deletion | 26507 | 1.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -53 | Cycle | Base Substitution | 26568 | 39.27 | 29.00 | 30.67 | -1.67 | Before |
| REGRESSION.HCC1395_tumor.L007 | -53 | Cycle | Base Insertion | 26540 | 0.85 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -53 | Cycle | Base Deletion | 26540 | 1.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -54 | Cycle | Base Substitution | 26656 | 49.79 | 29.00 | 30.76 | -1.76 | Before |
| REGRESSION.HCC1395_tumor.L007 | -54 | Cycle | Base Insertion | 26624 | 0.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -54 | Cycle | Base Deletion | 26624 | 1.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -55 | Cycle | Base Substitution | 26714 | 41.57 | 29.00 | 30.72 | -1.72 | Before |
| REGRESSION.HCC1395_tumor.L007 | -55 | Cycle | Base Insertion | 26674 | 0.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -55 | Cycle | Base Deletion | 26674 | 1.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -56 | Cycle | Base Substitution | 26690 | 45.45 | 29.00 | 30.24 | -1.24 | Before |
| REGRESSION.HCC1395_tumor.L007 | -56 | Cycle | Base Insertion | 26657 | 0.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -56 | Cycle | Base Deletion | 26657 | 1.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -57 | Cycle | Base Substitution | 26544 | 39.26 | 29.00 | 30.55 | -1.55 | Before |
| REGRESSION.HCC1395_tumor.L007 | -57 | Cycle | Base Insertion | 26491 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -57 | Cycle | Base Deletion | 26491 | 1.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -58 | Cycle | Base Substitution | 26556 | 34.73 | 30.00 | 30.79 | -0.79 | Before |
| REGRESSION.HCC1395_tumor.L007 | -58 | Cycle | Base Insertion | 26510 | 0.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -58 | Cycle | Base Deletion | 26510 | 1.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -59 | Cycle | Base Substitution | 26616 | 46.96 | 29.00 | 30.59 | -1.59 | Before |
| REGRESSION.HCC1395_tumor.L007 | -59 | Cycle | Base Insertion | 26569 | 0.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -59 | Cycle | Base Deletion | 26569 | 1.21 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -6 | Cycle | Base Substitution | 27075 | 45.63 | 29.00 | 30.80 | -1.80 | Before |
| REGRESSION.HCC1395_tumor.L007 | -6 | Cycle | Base Insertion | 27075 | 0.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -6 | Cycle | Base Deletion | 27075 | 1.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -60 | Cycle | Base Substitution | 26549 | 51.86 | 29.00 | 30.65 | -1.65 | Before |
| REGRESSION.HCC1395_tumor.L007 | -60 | Cycle | Base Insertion | 26488 | 0.62 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -60 | Cycle | Base Deletion | 26488 | 0.91 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -61 | Cycle | Base Substitution | 26431 | 38.10 | 30.00 | 31.09 | -1.09 | Before |
| REGRESSION.HCC1395_tumor.L007 | -61 | Cycle | Base Insertion | 26383 | 0.65 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -61 | Cycle | Base Deletion | 26383 | 0.87 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -62 | Cycle | Base Substitution | 26473 | 42.87 | 29.00 | 30.85 | -1.85 | Before |
| REGRESSION.HCC1395_tumor.L007 | -62 | Cycle | Base Insertion | 26420 | 1.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -62 | Cycle | Base Deletion | 26420 | 0.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -63 | Cycle | Base Substitution | 26383 | 33.61 | 30.00 | 30.70 | -0.70 | Before |
| REGRESSION.HCC1395_tumor.L007 | -63 | Cycle | Base Insertion | 26330 | 0.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -63 | Cycle | Base Deletion | 26330 | 0.62 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -64 | Cycle | Base Substitution | 26394 | 40.23 | 29.00 | 30.84 | -1.84 | Before |
| REGRESSION.HCC1395_tumor.L007 | -64 | Cycle | Base Insertion | 26337 | 0.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -64 | Cycle | Base Deletion | 26337 | 1.03 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -65 | Cycle | Base Substitution | 26348 | 37.07 | 30.00 | 30.75 | -0.75 | Before |
| REGRESSION.HCC1395_tumor.L007 | -65 | Cycle | Base Insertion | 26270 | 0.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -65 | Cycle | Base Deletion | 26270 | 1.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -66 | Cycle | Base Substitution | 26426 | 39.00 | 29.00 | 30.60 | -1.60 | Before |
| REGRESSION.HCC1395_tumor.L007 | -66 | Cycle | Base Insertion | 26345 | 0.52 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -66 | Cycle | Base Deletion | 26345 | 0.96 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -67 | Cycle | Base Substitution | 26477 | 47.07 | 29.00 | 30.48 | -1.48 | Before |
| REGRESSION.HCC1395_tumor.L007 | -67 | Cycle | Base Insertion | 26391 | 0.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -67 | Cycle | Base Deletion | 26391 | 1.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -68 | Cycle | Base Substitution | 26461 | 36.55 | 30.00 | 31.02 | -1.02 | Before |
| REGRESSION.HCC1395_tumor.L007 | -68 | Cycle | Base Insertion | 26371 | 0.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -68 | Cycle | Base Deletion | 26371 | 1.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -69 | Cycle | Base Substitution | 26398 | 40.58 | 29.00 | 30.90 | -1.90 | Before |
| REGRESSION.HCC1395_tumor.L007 | -69 | Cycle | Base Insertion | 26309 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -69 | Cycle | Base Deletion | 26309 | 1.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -7 | Cycle | Base Substitution | 27003 | 51.13 | 29.00 | 30.64 | -1.64 | Before |
| REGRESSION.HCC1395_tumor.L007 | -7 | Cycle | Base Insertion | 27003 | 0.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -7 | Cycle | Base Deletion | 27003 | 0.83 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -70 | Cycle | Base Substitution | 26263 | 34.24 | 30.00 | 30.44 | -0.44 | Before |
| REGRESSION.HCC1395_tumor.L007 | -70 | Cycle | Base Insertion | 26167 | 0.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -70 | Cycle | Base Deletion | 26167 | 1.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -71 | Cycle | Base Substitution | 26211 | 39.29 | 29.00 | 30.55 | -1.55 | Before |
| REGRESSION.HCC1395_tumor.L007 | -71 | Cycle | Base Insertion | 26124 | 0.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -71 | Cycle | Base Deletion | 26124 | 1.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -72 | Cycle | Base Substitution | 26154 | 47.02 | 29.00 | 30.71 | -1.71 | Before |
| REGRESSION.HCC1395_tumor.L007 | -72 | Cycle | Base Insertion | 26048 | 0.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -72 | Cycle | Base Deletion | 26048 | 1.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -73 | Cycle | Base Substitution | 26242 | 44.18 | 29.00 | 30.55 | -1.55 | Before |
| REGRESSION.HCC1395_tumor.L007 | -73 | Cycle | Base Insertion | 26124 | 0.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -73 | Cycle | Base Deletion | 26124 | 1.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -74 | Cycle | Base Substitution | 26099 | 40.08 | 29.00 | 30.15 | -1.15 | Before |
| REGRESSION.HCC1395_tumor.L007 | -74 | Cycle | Base Insertion | 25975 | 0.21 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -74 | Cycle | Base Deletion | 25975 | 1.66 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -75 | Cycle | Base Substitution | 26158 | 44.48 | 29.00 | 30.78 | -1.78 | Before |
| REGRESSION.HCC1395_tumor.L007 | -75 | Cycle | Base Insertion | 26035 | 0.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -75 | Cycle | Base Deletion | 26035 | 1.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -76 | Cycle | Base Substitution | 26088 | 40.17 | 29.00 | 30.41 | -1.41 | Before |
| REGRESSION.HCC1395_tumor.L007 | -76 | Cycle | Base Insertion | 25966 | 0.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -76 | Cycle | Base Deletion | 25966 | 1.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -77 | Cycle | Base Substitution | 26072 | 37.20 | 29.00 | 30.71 | -1.71 | Before |
| REGRESSION.HCC1395_tumor.L007 | -77 | Cycle | Base Insertion | 25950 | 0.12 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -77 | Cycle | Base Deletion | 25950 | 1.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -78 | Cycle | Base Substitution | 25968 | 41.74 | 29.00 | 30.58 | -1.58 | Before |
| REGRESSION.HCC1395_tumor.L007 | -78 | Cycle | Base Insertion | 25831 | 0.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -78 | Cycle | Base Deletion | 25831 | 1.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -79 | Cycle | Base Substitution | 25966 | 53.52 | 29.00 | 30.58 | -1.58 | Before |
| REGRESSION.HCC1395_tumor.L007 | -79 | Cycle | Base Insertion | 25827 | 0.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -79 | Cycle | Base Deletion | 25827 | 2.12 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -8 | Cycle | Base Substitution | 27113 | 37.48 | 30.00 | 30.67 | -0.67 | Before |
| REGRESSION.HCC1395_tumor.L007 | -8 | Cycle | Base Insertion | 27113 | 0.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -8 | Cycle | Base Deletion | 27113 | 1.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -80 | Cycle | Base Substitution | 25952 | 38.02 | 29.00 | 30.38 | -1.38 | Before |
| REGRESSION.HCC1395_tumor.L007 | -80 | Cycle | Base Insertion | 25798 | 0.12 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -80 | Cycle | Base Deletion | 25798 | 1.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -81 | Cycle | Base Substitution | 25916 | 41.35 | 29.00 | 30.67 | -1.67 | Before |
| REGRESSION.HCC1395_tumor.L007 | -81 | Cycle | Base Insertion | 25764 | 0.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -81 | Cycle | Base Deletion | 25764 | 1.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -82 | Cycle | Base Substitution | 25881 | 38.78 | 29.00 | 30.33 | -1.33 | Before |
| REGRESSION.HCC1395_tumor.L007 | -82 | Cycle | Base Insertion | 25696 | 0.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -82 | Cycle | Base Deletion | 25696 | 1.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -83 | Cycle | Base Substitution | 25853 | 41.18 | 29.00 | 30.38 | -1.38 | Before |
| REGRESSION.HCC1395_tumor.L007 | -83 | Cycle | Base Insertion | 25674 | 0.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -83 | Cycle | Base Deletion | 25674 | 1.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -84 | Cycle | Base Substitution | 25749 | 48.57 | 29.00 | 30.58 | -1.58 | Before |
| REGRESSION.HCC1395_tumor.L007 | -84 | Cycle | Base Insertion | 25571 | 0.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -84 | Cycle | Base Deletion | 25571 | 1.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -85 | Cycle | Base Substitution | 25835 | 43.04 | 29.00 | 30.50 | -1.50 | Before |
| REGRESSION.HCC1395_tumor.L007 | -85 | Cycle | Base Insertion | 25655 | 0.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -85 | Cycle | Base Deletion | 25655 | 1.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -86 | Cycle | Base Substitution | 25813 | 36.36 | 30.00 | 30.79 | -0.79 | Before |
| REGRESSION.HCC1395_tumor.L007 | -86 | Cycle | Base Insertion | 25639 | 0.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -86 | Cycle | Base Deletion | 25639 | 1.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -87 | Cycle | Base Substitution | 25581 | 45.47 | 29.00 | 30.24 | -1.24 | Before |
| REGRESSION.HCC1395_tumor.L007 | -87 | Cycle | Base Insertion | 25409 | 0.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -87 | Cycle | Base Deletion | 25409 | 1.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -88 | Cycle | Base Substitution | 25674 | 45.90 | 29.00 | 30.64 | -1.64 | Before |
| REGRESSION.HCC1395_tumor.L007 | -88 | Cycle | Base Insertion | 25475 | 0.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -88 | Cycle | Base Deletion | 25475 | 1.03 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -89 | Cycle | Base Substitution | 25717 | 59.89 | 29.00 | 30.40 | -1.40 | Before |
| REGRESSION.HCC1395_tumor.L007 | -89 | Cycle | Base Insertion | 25510 | 0.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -89 | Cycle | Base Deletion | 25510 | 1.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -9 | Cycle | Base Substitution | 26973 | 44.89 | 30.00 | 31.42 | -1.42 | Before |
| REGRESSION.HCC1395_tumor.L007 | -9 | Cycle | Base Insertion | 26973 | 0.81 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -9 | Cycle | Base Deletion | 26973 | 0.82 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -90 | Cycle | Base Substitution | 25623 | 38.12 | 29.00 | 30.38 | -1.38 | Before |
| REGRESSION.HCC1395_tumor.L007 | -90 | Cycle | Base Insertion | 25405 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -90 | Cycle | Base Deletion | 25405 | 1.65 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -91 | Cycle | Base Substitution | 25487 | 47.22 | 29.00 | 30.31 | -1.31 | Before |
| REGRESSION.HCC1395_tumor.L007 | -91 | Cycle | Base Insertion | 25244 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -91 | Cycle | Base Deletion | 25244 | 1.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -92 | Cycle | Base Substitution | 25452 | 45.65 | 29.00 | 30.11 | -1.11 | Before |
| REGRESSION.HCC1395_tumor.L007 | -92 | Cycle | Base Insertion | 25220 | 0.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -92 | Cycle | Base Deletion | 25220 | 1.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -93 | Cycle | Base Substitution | 25391 | 38.23 | 29.00 | 30.47 | -1.47 | Before |
| REGRESSION.HCC1395_tumor.L007 | -93 | Cycle | Base Insertion | 25157 | 1.02 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -93 | Cycle | Base Deletion | 25157 | 1.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -94 | Cycle | Base Substitution | 25340 | 47.47 | 29.00 | 30.47 | -1.47 | Before |
| REGRESSION.HCC1395_tumor.L007 | -94 | Cycle | Base Insertion | 25123 | 0.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -94 | Cycle | Base Deletion | 25123 | 1.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -95 | Cycle | Base Substitution | 25288 | 51.97 | 29.00 | 30.07 | -1.07 | Before |
| REGRESSION.HCC1395_tumor.L007 | -95 | Cycle | Base Insertion | 25077 | 0.60 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -95 | Cycle | Base Deletion | 25077 | 1.74 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -96 | Cycle | Base Substitution | 25354 | 55.56 | 29.00 | 30.27 | -1.27 | Before |
| REGRESSION.HCC1395_tumor.L007 | -96 | Cycle | Base Insertion | 25138 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -96 | Cycle | Base Deletion | 25138 | 1.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -97 | Cycle | Base Substitution | 25155 | 45.35 | 29.00 | 30.24 | -1.24 | Before |
| REGRESSION.HCC1395_tumor.L007 | -97 | Cycle | Base Insertion | 24948 | 0.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -97 | Cycle | Base Deletion | 24948 | 1.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -98 | Cycle | Base Substitution | 25063 | 40.70 | 29.00 | 30.53 | -1.53 | Before |
| REGRESSION.HCC1395_tumor.L007 | -98 | Cycle | Base Insertion | 24841 | 0.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -98 | Cycle | Base Deletion | 24841 | 1.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -99 | Cycle | Base Substitution | 25030 | 46.34 | 29.00 | 30.31 | -1.31 | Before |
| REGRESSION.HCC1395_tumor.L007 | -99 | Cycle | Base Insertion | 24790 | 0.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | -99 | Cycle | Base Deletion | 24790 | 1.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 1 | Cycle | Base Substitution | 26614 | 59.28 | 27.00 | 28.88 | -1.88 | Before |
| REGRESSION.HCC1395_tumor.L007 | 10 | Cycle | Base Substitution | 26979 | 31.23 | 31.00 | 31.26 | -0.26 | Before |
| REGRESSION.HCC1395_tumor.L007 | 10 | Cycle | Base Insertion | 26979 | 0.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 10 | Cycle | Base Deletion | 26979 | 1.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 100 | Cycle | Base Substitution | 24851 | 22.76 | 30.00 | 30.55 | -0.55 | Before |
| REGRESSION.HCC1395_tumor.L007 | 100 | Cycle | Base Insertion | 24605 | 0.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 100 | Cycle | Base Deletion | 24605 | 0.93 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 101 | Cycle | Base Substitution | 24824 | 39.26 | 29.00 | 30.34 | -1.34 | Before |
| REGRESSION.HCC1395_tumor.L007 | 101 | Cycle | Base Insertion | 24577 | 0.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 101 | Cycle | Base Deletion | 24577 | 1.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 102 | Cycle | Base Substitution | 24795 | 41.61 | 29.00 | 30.67 | -1.67 | Before |
| REGRESSION.HCC1395_tumor.L007 | 102 | Cycle | Base Insertion | 24541 | 0.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 102 | Cycle | Base Deletion | 24541 | 1.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 103 | Cycle | Base Substitution | 24709 | 44.63 | 29.00 | 30.22 | -1.22 | Before |
| REGRESSION.HCC1395_tumor.L007 | 103 | Cycle | Base Insertion | 24462 | 1.61 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 103 | Cycle | Base Deletion | 24462 | 0.90 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 104 | Cycle | Base Substitution | 24742 | 42.07 | 29.00 | 30.47 | -1.47 | Before |
| REGRESSION.HCC1395_tumor.L007 | 104 | Cycle | Base Insertion | 24480 | 0.52 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 104 | Cycle | Base Deletion | 24480 | 0.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 105 | Cycle | Base Substitution | 24604 | 34.11 | 30.00 | 30.57 | -0.57 | Before |
| REGRESSION.HCC1395_tumor.L007 | 105 | Cycle | Base Insertion | 24337 | 0.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 105 | Cycle | Base Deletion | 24337 | 0.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 106 | Cycle | Base Substitution | 24542 | 47.53 | 29.00 | 30.31 | -1.31 | Before |
| REGRESSION.HCC1395_tumor.L007 | 106 | Cycle | Base Insertion | 24269 | 0.80 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 106 | Cycle | Base Deletion | 24269 | 0.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 107 | Cycle | Base Substitution | 24427 | 49.10 | 29.00 | 30.45 | -1.45 | Before |
| REGRESSION.HCC1395_tumor.L007 | 107 | Cycle | Base Insertion | 24138 | 1.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 107 | Cycle | Base Deletion | 24138 | 0.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 108 | Cycle | Base Substitution | 24410 | 44.57 | 29.00 | 30.50 | -1.50 | Before |
| REGRESSION.HCC1395_tumor.L007 | 108 | Cycle | Base Insertion | 24130 | 1.04 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 108 | Cycle | Base Deletion | 24130 | 0.82 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 109 | Cycle | Base Substitution | 24316 | 44.41 | 29.00 | 30.34 | -1.34 | Before |
| REGRESSION.HCC1395_tumor.L007 | 109 | Cycle | Base Insertion | 24034 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 109 | Cycle | Base Deletion | 24034 | 0.78 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 11 | Cycle | Base Substitution | 27023 | 30.64 | 31.00 | 31.41 | -0.41 | Before |
| REGRESSION.HCC1395_tumor.L007 | 11 | Cycle | Base Insertion | 27023 | 0.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 11 | Cycle | Base Deletion | 27023 | 1.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 110 | Cycle | Base Substitution | 24138 | 37.77 | 29.00 | 30.30 | -1.30 | Before |
| REGRESSION.HCC1395_tumor.L007 | 110 | Cycle | Base Insertion | 23877 | 0.66 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 110 | Cycle | Base Deletion | 23877 | 1.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 111 | Cycle | Base Substitution | 24241 | 35.72 | 29.00 | 30.29 | -1.29 | Before |
| REGRESSION.HCC1395_tumor.L007 | 111 | Cycle | Base Insertion | 23973 | 0.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 111 | Cycle | Base Deletion | 23973 | 1.73 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 112 | Cycle | Base Substitution | 24134 | 45.79 | 29.00 | 30.37 | -1.37 | Before |
| REGRESSION.HCC1395_tumor.L007 | 112 | Cycle | Base Insertion | 23857 | 0.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 112 | Cycle | Base Deletion | 23857 | 1.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 113 | Cycle | Base Substitution | 24143 | 39.42 | 29.00 | 30.63 | -1.63 | Before |
| REGRESSION.HCC1395_tumor.L007 | 113 | Cycle | Base Insertion | 23862 | 0.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 113 | Cycle | Base Deletion | 23862 | 1.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 114 | Cycle | Base Substitution | 23986 | 45.22 | 29.00 | 30.26 | -1.26 | Before |
| REGRESSION.HCC1395_tumor.L007 | 114 | Cycle | Base Insertion | 23713 | 0.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 114 | Cycle | Base Deletion | 23713 | 0.79 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 115 | Cycle | Base Substitution | 23998 | 36.59 | 29.00 | 30.32 | -1.32 | Before |
| REGRESSION.HCC1395_tumor.L007 | 115 | Cycle | Base Insertion | 23694 | 0.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 115 | Cycle | Base Deletion | 23694 | 0.95 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 116 | Cycle | Base Substitution | 23935 | 39.82 | 29.00 | 30.62 | -1.62 | Before |
| REGRESSION.HCC1395_tumor.L007 | 116 | Cycle | Base Insertion | 23629 | 0.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 116 | Cycle | Base Deletion | 23629 | 0.82 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 117 | Cycle | Base Substitution | 23806 | 33.66 | 30.00 | 30.41 | -0.41 | Before |
| REGRESSION.HCC1395_tumor.L007 | 117 | Cycle | Base Insertion | 23504 | 0.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 117 | Cycle | Base Deletion | 23504 | 1.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 118 | Cycle | Base Substitution | 23777 | 49.36 | 28.00 | 29.83 | -1.83 | Before |
| REGRESSION.HCC1395_tumor.L007 | 118 | Cycle | Base Insertion | 23480 | 0.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 118 | Cycle | Base Deletion | 23480 | 1.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 119 | Cycle | Base Substitution | 23834 | 47.73 | 29.00 | 30.49 | -1.49 | Before |
| REGRESSION.HCC1395_tumor.L007 | 119 | Cycle | Base Insertion | 23547 | 0.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 119 | Cycle | Base Deletion | 23547 | 1.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 12 | Cycle | Base Substitution | 26895 | 32.65 | 30.00 | 31.27 | -1.27 | Before |
| REGRESSION.HCC1395_tumor.L007 | 12 | Cycle | Base Insertion | 26895 | 0.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 12 | Cycle | Base Deletion | 26895 | 1.83 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 120 | Cycle | Base Substitution | 23676 | 41.25 | 29.00 | 30.48 | -1.48 | Before |
| REGRESSION.HCC1395_tumor.L007 | 120 | Cycle | Base Insertion | 23386 | 0.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 120 | Cycle | Base Deletion | 23386 | 1.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 121 | Cycle | Base Substitution | 23528 | 33.98 | 30.00 | 30.05 | -0.05 | Before |
| REGRESSION.HCC1395_tumor.L007 | 121 | Cycle | Base Insertion | 23222 | 0.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 121 | Cycle | Base Deletion | 23222 | 1.62 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 122 | Cycle | Base Substitution | 23595 | 54.14 | 29.00 | 30.12 | -1.12 | Before |
| REGRESSION.HCC1395_tumor.L007 | 122 | Cycle | Base Insertion | 23300 | 0.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 122 | Cycle | Base Deletion | 23300 | 1.94 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 123 | Cycle | Base Substitution | 23440 | 36.89 | 29.00 | 30.24 | -1.24 | Before |
| REGRESSION.HCC1395_tumor.L007 | 123 | Cycle | Base Insertion | 23137 | 0.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 123 | Cycle | Base Deletion | 23137 | 1.94 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 124 | Cycle | Base Substitution | 23319 | 37.65 | 29.00 | 29.79 | -0.79 | Before |
| REGRESSION.HCC1395_tumor.L007 | 124 | Cycle | Base Insertion | 23022 | 0.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 124 | Cycle | Base Deletion | 23022 | 1.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 125 | Cycle | Base Substitution | 23334 | 51.28 | 29.00 | 30.26 | -1.26 | Before |
| REGRESSION.HCC1395_tumor.L007 | 125 | Cycle | Base Insertion | 23022 | 0.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 125 | Cycle | Base Deletion | 23022 | 1.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 126 | Cycle | Base Substitution | 23256 | 37.12 | 29.00 | 30.26 | -1.26 | Before |
| REGRESSION.HCC1395_tumor.L007 | 126 | Cycle | Base Insertion | 22966 | 1.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 126 | Cycle | Base Deletion | 22966 | 1.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 127 | Cycle | Base Substitution | 23132 | 53.61 | 28.00 | 29.74 | -1.74 | Before |
| REGRESSION.HCC1395_tumor.L007 | 127 | Cycle | Base Insertion | 22827 | 0.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 127 | Cycle | Base Deletion | 22827 | 0.66 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 128 | Cycle | Base Substitution | 22906 | 49.15 | 28.00 | 29.98 | -1.98 | Before |
| REGRESSION.HCC1395_tumor.L007 | 128 | Cycle | Base Insertion | 22615 | 0.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 128 | Cycle | Base Deletion | 22615 | 0.77 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 129 | Cycle | Base Substitution | 22922 | 50.93 | 28.00 | 29.98 | -1.98 | Before |
| REGRESSION.HCC1395_tumor.L007 | 129 | Cycle | Base Insertion | 22621 | 0.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 129 | Cycle | Base Deletion | 22621 | 0.96 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 13 | Cycle | Base Substitution | 26888 | 33.72 | 30.00 | 31.30 | -1.30 | Before |
| REGRESSION.HCC1395_tumor.L007 | 13 | Cycle | Base Insertion | 26888 | 0.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 13 | Cycle | Base Deletion | 26888 | 1.66 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 130 | Cycle | Base Substitution | 22954 | 50.20 | 29.00 | 30.02 | -1.02 | Before |
| REGRESSION.HCC1395_tumor.L007 | 130 | Cycle | Base Insertion | 22628 | 0.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 130 | Cycle | Base Deletion | 22628 | 0.96 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 131 | Cycle | Base Substitution | 22918 | 53.50 | 28.00 | 29.97 | -1.97 | Before |
| REGRESSION.HCC1395_tumor.L007 | 131 | Cycle | Base Insertion | 22569 | 0.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 131 | Cycle | Base Deletion | 22569 | 1.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 132 | Cycle | Base Substitution | 22888 | 39.93 | 29.00 | 30.37 | -1.37 | Before |
| REGRESSION.HCC1395_tumor.L007 | 132 | Cycle | Base Insertion | 22555 | 0.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 132 | Cycle | Base Deletion | 22555 | 0.89 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 133 | Cycle | Base Substitution | 22675 | 47.13 | 28.00 | 29.94 | -1.94 | Before |
| REGRESSION.HCC1395_tumor.L007 | 133 | Cycle | Base Insertion | 22347 | 0.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 133 | Cycle | Base Deletion | 22347 | 0.73 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 134 | Cycle | Base Substitution | 22651 | 37.86 | 29.00 | 30.04 | -1.04 | Before |
| REGRESSION.HCC1395_tumor.L007 | 134 | Cycle | Base Insertion | 22344 | 0.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 134 | Cycle | Base Deletion | 22344 | 0.92 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 135 | Cycle | Base Substitution | 22533 | 49.96 | 28.00 | 29.96 | -1.96 | Before |
| REGRESSION.HCC1395_tumor.L007 | 135 | Cycle | Base Insertion | 22239 | 0.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 135 | Cycle | Base Deletion | 22239 | 0.78 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 136 | Cycle | Base Substitution | 22426 | 50.56 | 29.00 | 30.14 | -1.14 | Before |
| REGRESSION.HCC1395_tumor.L007 | 136 | Cycle | Base Insertion | 22113 | 0.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 136 | Cycle | Base Deletion | 22113 | 0.84 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 137 | Cycle | Base Substitution | 22498 | 52.77 | 28.00 | 29.94 | -1.94 | Before |
| REGRESSION.HCC1395_tumor.L007 | 137 | Cycle | Base Insertion | 22171 | 0.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 137 | Cycle | Base Deletion | 22171 | 1.12 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 138 | Cycle | Base Substitution | 22386 | 35.75 | 29.00 | 30.15 | -1.15 | Before |
| REGRESSION.HCC1395_tumor.L007 | 138 | Cycle | Base Insertion | 22081 | 0.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 138 | Cycle | Base Deletion | 22081 | 1.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 139 | Cycle | Base Substitution | 22375 | 52.16 | 28.00 | 29.97 | -1.97 | Before |
| REGRESSION.HCC1395_tumor.L007 | 139 | Cycle | Base Insertion | 22028 | 0.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 139 | Cycle | Base Deletion | 22028 | 1.21 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 14 | Cycle | Base Substitution | 26877 | 29.22 | 31.00 | 31.41 | -0.41 | Before |
| REGRESSION.HCC1395_tumor.L007 | 14 | Cycle | Base Insertion | 26877 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 14 | Cycle | Base Deletion | 26877 | 1.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 140 | Cycle | Base Substitution | 22290 | 41.14 | 29.00 | 30.05 | -1.05 | Before |
| REGRESSION.HCC1395_tumor.L007 | 140 | Cycle | Base Insertion | 21971 | 0.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 140 | Cycle | Base Deletion | 21971 | 0.88 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 141 | Cycle | Base Substitution | 22198 | 42.54 | 28.00 | 29.99 | -1.99 | Before |
| REGRESSION.HCC1395_tumor.L007 | 141 | Cycle | Base Insertion | 21879 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 141 | Cycle | Base Deletion | 21879 | 0.79 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 142 | Cycle | Base Substitution | 22010 | 41.73 | 28.00 | 29.80 | -1.80 | Before |
| REGRESSION.HCC1395_tumor.L007 | 142 | Cycle | Base Insertion | 21648 | 0.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 142 | Cycle | Base Deletion | 21648 | 0.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 143 | Cycle | Base Substitution | 22095 | 41.66 | 28.00 | 30.00 | -2.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 143 | Cycle | Base Insertion | 21775 | 0.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 143 | Cycle | Base Deletion | 21775 | 0.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 144 | Cycle | Base Substitution | 22000 | 47.36 | 28.00 | 29.78 | -1.78 | Before |
| REGRESSION.HCC1395_tumor.L007 | 144 | Cycle | Base Insertion | 21641 | 0.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 144 | Cycle | Base Deletion | 21641 | 0.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 145 | Cycle | Base Substitution | 21803 | 38.87 | 29.00 | 30.06 | -1.06 | Before |
| REGRESSION.HCC1395_tumor.L007 | 145 | Cycle | Base Insertion | 21427 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 145 | Cycle | Base Deletion | 21427 | 0.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 146 | Cycle | Base Substitution | 21823 | 48.25 | 28.00 | 29.95 | -1.95 | Before |
| REGRESSION.HCC1395_tumor.L007 | 146 | Cycle | Base Insertion | 21475 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 146 | Cycle | Base Deletion | 21475 | 0.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 147 | Cycle | Base Substitution | 21700 | 45.09 | 28.00 | 29.92 | -1.92 | Before |
| REGRESSION.HCC1395_tumor.L007 | 148 | Cycle | Base Substitution | 21613 | 46.97 | 29.00 | 30.17 | -1.17 | Before |
| REGRESSION.HCC1395_tumor.L007 | 149 | Cycle | Base Substitution | 21420 | 50.31 | 28.00 | 29.61 | -1.61 | Before |
| REGRESSION.HCC1395_tumor.L007 | 15 | Cycle | Base Substitution | 26790 | 28.05 | 31.00 | 31.40 | -0.40 | Before |
| REGRESSION.HCC1395_tumor.L007 | 15 | Cycle | Base Insertion | 26790 | 0.95 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 15 | Cycle | Base Deletion | 26790 | 1.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 150 | Cycle | Base Substitution | 21360 | 42.48 | 29.00 | 30.08 | -1.08 | Before |
| REGRESSION.HCC1395_tumor.L007 | 16 | Cycle | Base Substitution | 26788 | 20.33 | 32.00 | 32.85 | -0.85 | Before |
| REGRESSION.HCC1395_tumor.L007 | 16 | Cycle | Base Insertion | 26788 | 0.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 16 | Cycle | Base Deletion | 26788 | 1.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 17 | Cycle | Base Substitution | 26792 | 31.16 | 31.00 | 32.49 | -1.49 | Before |
| REGRESSION.HCC1395_tumor.L007 | 17 | Cycle | Base Insertion | 26792 | 0.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 17 | Cycle | Base Deletion | 26792 | 1.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 18 | Cycle | Base Substitution | 26771 | 23.05 | 32.00 | 32.98 | -0.98 | Before |
| REGRESSION.HCC1395_tumor.L007 | 18 | Cycle | Base Insertion | 26771 | 0.52 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 18 | Cycle | Base Deletion | 26771 | 1.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 19 | Cycle | Base Substitution | 26965 | 20.39 | 33.00 | 33.08 | -0.08 | Before |
| REGRESSION.HCC1395_tumor.L007 | 19 | Cycle | Base Insertion | 26965 | 0.52 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 19 | Cycle | Base Deletion | 26965 | 1.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 2 | Cycle | Base Substitution | 27040 | 49.01 | 29.00 | 30.40 | -1.40 | Before |
| REGRESSION.HCC1395_tumor.L007 | 20 | Cycle | Base Substitution | 26907 | 20.11 | 32.00 | 32.66 | -0.66 | Before |
| REGRESSION.HCC1395_tumor.L007 | 20 | Cycle | Base Insertion | 26907 | 0.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 20 | Cycle | Base Deletion | 26907 | 2.01 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 21 | Cycle | Base Substitution | 26842 | 29.34 | 31.00 | 32.62 | -1.62 | Before |
| REGRESSION.HCC1395_tumor.L007 | 21 | Cycle | Base Insertion | 26842 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 21 | Cycle | Base Deletion | 26842 | 1.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 22 | Cycle | Base Substitution | 26782 | 21.11 | 32.00 | 32.98 | -0.98 | Before |
| REGRESSION.HCC1395_tumor.L007 | 22 | Cycle | Base Insertion | 26782 | 0.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 22 | Cycle | Base Deletion | 26782 | 1.67 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 23 | Cycle | Base Substitution | 26820 | 20.12 | 33.00 | 33.08 | -0.08 | Before |
| REGRESSION.HCC1395_tumor.L007 | 23 | Cycle | Base Insertion | 26820 | 0.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 23 | Cycle | Base Deletion | 26820 | 2.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 24 | Cycle | Base Substitution | 26692 | 19.08 | 33.00 | 33.04 | -0.04 | Before |
| REGRESSION.HCC1395_tumor.L007 | 24 | Cycle | Base Insertion | 26692 | 0.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 24 | Cycle | Base Deletion | 26692 | 1.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 25 | Cycle | Base Substitution | 26650 | 23.12 | 32.00 | 33.08 | -1.08 | Before |
| REGRESSION.HCC1395_tumor.L007 | 25 | Cycle | Base Insertion | 26650 | 0.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 25 | Cycle | Base Deletion | 26650 | 1.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 26 | Cycle | Base Substitution | 26742 | 27.69 | 31.00 | 31.51 | -0.51 | Before |
| REGRESSION.HCC1395_tumor.L007 | 26 | Cycle | Base Insertion | 26742 | 0.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 26 | Cycle | Base Deletion | 26742 | 1.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 27 | Cycle | Base Substitution | 26706 | 33.75 | 30.00 | 31.35 | -1.35 | Before |
| REGRESSION.HCC1395_tumor.L007 | 27 | Cycle | Base Insertion | 26706 | 0.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 27 | Cycle | Base Deletion | 26706 | 2.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 28 | Cycle | Base Substitution | 26733 | 30.32 | 31.00 | 31.54 | -0.54 | Before |
| REGRESSION.HCC1395_tumor.L007 | 28 | Cycle | Base Insertion | 26733 | 0.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 28 | Cycle | Base Deletion | 26733 | 1.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 29 | Cycle | Base Substitution | 26777 | 26.25 | 31.00 | 31.37 | -0.37 | Before |
| REGRESSION.HCC1395_tumor.L007 | 29 | Cycle | Base Insertion | 26777 | 0.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 29 | Cycle | Base Deletion | 26777 | 1.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 3 | Cycle | Base Substitution | 26924 | 57.56 | 29.00 | 30.85 | -1.85 | Before |
| REGRESSION.HCC1395_tumor.L007 | 30 | Cycle | Base Substitution | 26692 | 28.14 | 31.00 | 31.53 | -0.53 | Before |
| REGRESSION.HCC1395_tumor.L007 | 30 | Cycle | Base Insertion | 26692 | 0.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 30 | Cycle | Base Deletion | 26692 | 1.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 31 | Cycle | Base Substitution | 26742 | 30.71 | 31.00 | 31.46 | -0.46 | Before |
| REGRESSION.HCC1395_tumor.L007 | 31 | Cycle | Base Insertion | 26741 | 0.74 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 31 | Cycle | Base Deletion | 26741 | 1.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 32 | Cycle | Base Substitution | 26712 | 41.08 | 30.00 | 31.81 | -1.81 | Before |
| REGRESSION.HCC1395_tumor.L007 | 32 | Cycle | Base Insertion | 26712 | 0.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 32 | Cycle | Base Deletion | 26712 | 1.98 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 33 | Cycle | Base Substitution | 26785 | 38.53 | 30.00 | 31.55 | -1.55 | Before |
| REGRESSION.HCC1395_tumor.L007 | 33 | Cycle | Base Insertion | 26784 | 0.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 33 | Cycle | Base Deletion | 26784 | 1.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 34 | Cycle | Base Substitution | 26766 | 29.06 | 31.00 | 31.67 | -0.67 | Before |
| REGRESSION.HCC1395_tumor.L007 | 34 | Cycle | Base Insertion | 26766 | 0.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 34 | Cycle | Base Deletion | 26766 | 1.21 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 35 | Cycle | Base Substitution | 26596 | 41.10 | 30.00 | 31.80 | -1.80 | Before |
| REGRESSION.HCC1395_tumor.L007 | 35 | Cycle | Base Insertion | 26596 | 0.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 35 | Cycle | Base Deletion | 26596 | 1.90 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 36 | Cycle | Base Substitution | 26684 | 35.20 | 30.00 | 31.58 | -1.58 | Before |
| REGRESSION.HCC1395_tumor.L007 | 36 | Cycle | Base Insertion | 26683 | 0.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 36 | Cycle | Base Deletion | 26683 | 1.77 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 37 | Cycle | Base Substitution | 26775 | 32.16 | 30.00 | 31.72 | -1.72 | Before |
| REGRESSION.HCC1395_tumor.L007 | 37 | Cycle | Base Insertion | 26774 | 0.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 37 | Cycle | Base Deletion | 26774 | 1.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 38 | Cycle | Base Substitution | 26682 | 29.54 | 31.00 | 31.89 | -0.89 | Before |
| REGRESSION.HCC1395_tumor.L007 | 38 | Cycle | Base Insertion | 26681 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 38 | Cycle | Base Deletion | 26681 | 1.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 39 | Cycle | Base Substitution | 26516 | 34.65 | 30.00 | 31.46 | -1.46 | Before |
| REGRESSION.HCC1395_tumor.L007 | 39 | Cycle | Base Insertion | 26515 | 0.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 39 | Cycle | Base Deletion | 26515 | 1.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 4 | Cycle | Base Substitution | 26966 | 65.88 | 28.00 | 30.92 | -2.92 | Before |
| REGRESSION.HCC1395_tumor.L007 | 40 | Cycle | Base Substitution | 26601 | 33.27 | 30.00 | 31.42 | -1.42 | Before |
| REGRESSION.HCC1395_tumor.L007 | 40 | Cycle | Base Insertion | 26599 | 0.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 40 | Cycle | Base Deletion | 26599 | 0.96 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 41 | Cycle | Base Substitution | 26642 | 33.88 | 30.00 | 31.47 | -1.47 | Before |
| REGRESSION.HCC1395_tumor.L007 | 41 | Cycle | Base Insertion | 26640 | 0.92 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 41 | Cycle | Base Deletion | 26640 | 1.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 42 | Cycle | Base Substitution | 26585 | 38.74 | 30.00 | 31.57 | -1.57 | Before |
| REGRESSION.HCC1395_tumor.L007 | 42 | Cycle | Base Insertion | 26581 | 0.85 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 42 | Cycle | Base Deletion | 26581 | 0.90 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 43 | Cycle | Base Substitution | 26605 | 34.43 | 30.00 | 31.56 | -1.56 | Before |
| REGRESSION.HCC1395_tumor.L007 | 43 | Cycle | Base Insertion | 26601 | 0.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 43 | Cycle | Base Deletion | 26601 | 0.84 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 44 | Cycle | Base Substitution | 26465 | 31.02 | 31.00 | 31.37 | -0.37 | Before |
| REGRESSION.HCC1395_tumor.L007 | 44 | Cycle | Base Insertion | 26461 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 44 | Cycle | Base Deletion | 26461 | 0.78 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 45 | Cycle | Base Substitution | 26485 | 37.99 | 30.00 | 31.70 | -1.70 | Before |
| REGRESSION.HCC1395_tumor.L007 | 45 | Cycle | Base Insertion | 26480 | 0.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 45 | Cycle | Base Deletion | 26480 | 1.21 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 46 | Cycle | Base Substitution | 26614 | 31.79 | 30.00 | 31.65 | -1.65 | Before |
| REGRESSION.HCC1395_tumor.L007 | 46 | Cycle | Base Insertion | 26609 | 0.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 46 | Cycle | Base Deletion | 26609 | 1.02 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 47 | Cycle | Base Substitution | 26518 | 40.13 | 30.00 | 31.24 | -1.24 | Before |
| REGRESSION.HCC1395_tumor.L007 | 47 | Cycle | Base Insertion | 26512 | 0.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 47 | Cycle | Base Deletion | 26512 | 1.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 48 | Cycle | Base Substitution | 26512 | 34.56 | 30.00 | 31.33 | -1.33 | Before |
| REGRESSION.HCC1395_tumor.L007 | 48 | Cycle | Base Insertion | 26503 | 0.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 48 | Cycle | Base Deletion | 26503 | 1.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 49 | Cycle | Base Substitution | 26529 | 35.09 | 30.00 | 31.63 | -1.63 | Before |
| REGRESSION.HCC1395_tumor.L007 | 49 | Cycle | Base Insertion | 26522 | 0.62 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 49 | Cycle | Base Deletion | 26522 | 2.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 5 | Cycle | Base Substitution | 26947 | 37.74 | 30.00 | 31.48 | -1.48 | Before |
| REGRESSION.HCC1395_tumor.L007 | 5 | Cycle | Base Insertion | 26947 | 0.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 5 | Cycle | Base Deletion | 26947 | 0.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 50 | Cycle | Base Substitution | 26549 | 34.88 | 30.00 | 31.55 | -1.55 | Before |
| REGRESSION.HCC1395_tumor.L007 | 50 | Cycle | Base Insertion | 26537 | 0.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 50 | Cycle | Base Deletion | 26537 | 1.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 51 | Cycle | Base Substitution | 26512 | 40.13 | 30.00 | 31.85 | -1.85 | Before |
| REGRESSION.HCC1395_tumor.L007 | 51 | Cycle | Base Insertion | 26495 | 0.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 51 | Cycle | Base Deletion | 26495 | 1.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 52 | Cycle | Base Substitution | 26504 | 30.93 | 31.00 | 31.41 | -0.41 | Before |
| REGRESSION.HCC1395_tumor.L007 | 52 | Cycle | Base Insertion | 26479 | 0.61 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 52 | Cycle | Base Deletion | 26479 | 1.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 53 | Cycle | Base Substitution | 26442 | 29.13 | 31.00 | 31.52 | -0.52 | Before |
| REGRESSION.HCC1395_tumor.L007 | 53 | Cycle | Base Insertion | 26413 | 0.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 53 | Cycle | Base Deletion | 26413 | 1.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 54 | Cycle | Base Substitution | 26384 | 36.12 | 30.00 | 31.57 | -1.57 | Before |
| REGRESSION.HCC1395_tumor.L007 | 54 | Cycle | Base Insertion | 26352 | 0.67 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 54 | Cycle | Base Deletion | 26352 | 1.52 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 55 | Cycle | Base Substitution | 26510 | 31.16 | 31.00 | 31.42 | -0.42 | Before |
| REGRESSION.HCC1395_tumor.L007 | 55 | Cycle | Base Insertion | 26475 | 0.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 55 | Cycle | Base Deletion | 26475 | 1.76 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 56 | Cycle | Base Substitution | 26471 | 40.47 | 30.00 | 31.32 | -1.32 | Before |
| REGRESSION.HCC1395_tumor.L007 | 56 | Cycle | Base Insertion | 26443 | 0.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 56 | Cycle | Base Deletion | 26443 | 1.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 57 | Cycle | Base Substitution | 26492 | 42.98 | 30.00 | 31.44 | -1.44 | Before |
| REGRESSION.HCC1395_tumor.L007 | 57 | Cycle | Base Insertion | 26444 | 0.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 57 | Cycle | Base Deletion | 26444 | 1.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 58 | Cycle | Base Substitution | 26421 | 33.18 | 30.00 | 31.84 | -1.84 | Before |
| REGRESSION.HCC1395_tumor.L007 | 58 | Cycle | Base Insertion | 26375 | 0.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 58 | Cycle | Base Deletion | 26375 | 1.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 59 | Cycle | Base Substitution | 26425 | 31.87 | 30.00 | 31.20 | -1.20 | Before |
| REGRESSION.HCC1395_tumor.L007 | 59 | Cycle | Base Insertion | 26382 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 59 | Cycle | Base Deletion | 26382 | 1.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 6 | Cycle | Base Substitution | 26946 | 34.67 | 30.00 | 31.34 | -1.34 | Before |
| REGRESSION.HCC1395_tumor.L007 | 6 | Cycle | Base Insertion | 26946 | 0.12 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 6 | Cycle | Base Deletion | 26946 | 0.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 60 | Cycle | Base Substitution | 26399 | 38.62 | 30.00 | 31.66 | -1.66 | Before |
| REGRESSION.HCC1395_tumor.L007 | 60 | Cycle | Base Insertion | 26344 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 60 | Cycle | Base Deletion | 26344 | 0.97 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 61 | Cycle | Base Substitution | 26426 | 30.22 | 31.00 | 31.51 | -0.51 | Before |
| REGRESSION.HCC1395_tumor.L007 | 61 | Cycle | Base Insertion | 26378 | 0.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 61 | Cycle | Base Deletion | 26378 | 1.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 62 | Cycle | Base Substitution | 26386 | 28.27 | 31.00 | 31.56 | -0.56 | Before |
| REGRESSION.HCC1395_tumor.L007 | 62 | Cycle | Base Insertion | 26328 | 0.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 62 | Cycle | Base Deletion | 26328 | 1.01 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 63 | Cycle | Base Substitution | 26330 | 40.86 | 30.00 | 31.28 | -1.28 | Before |
| REGRESSION.HCC1395_tumor.L007 | 63 | Cycle | Base Insertion | 26270 | 0.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 63 | Cycle | Base Deletion | 26270 | 1.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 64 | Cycle | Base Substitution | 26419 | 29.18 | 31.00 | 31.22 | -0.22 | Before |
| REGRESSION.HCC1395_tumor.L007 | 64 | Cycle | Base Insertion | 26358 | 0.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 64 | Cycle | Base Deletion | 26358 | 1.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 65 | Cycle | Base Substitution | 26435 | 35.58 | 30.00 | 31.43 | -1.43 | Before |
| REGRESSION.HCC1395_tumor.L007 | 65 | Cycle | Base Insertion | 26360 | 0.82 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 65 | Cycle | Base Deletion | 26360 | 1.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 66 | Cycle | Base Substitution | 26217 | 40.44 | 30.00 | 31.19 | -1.19 | Before |
| REGRESSION.HCC1395_tumor.L007 | 66 | Cycle | Base Insertion | 26140 | 0.98 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 66 | Cycle | Base Deletion | 26140 | 1.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 67 | Cycle | Base Substitution | 26269 | 39.64 | 29.00 | 30.90 | -1.90 | Before |
| REGRESSION.HCC1395_tumor.L007 | 67 | Cycle | Base Insertion | 26182 | 0.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 67 | Cycle | Base Deletion | 26182 | 1.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 68 | Cycle | Base Substitution | 26289 | 40.93 | 30.00 | 31.09 | -1.09 | Before |
| REGRESSION.HCC1395_tumor.L007 | 68 | Cycle | Base Insertion | 26187 | 0.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 68 | Cycle | Base Deletion | 26187 | 1.92 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 69 | Cycle | Base Substitution | 26148 | 36.99 | 30.00 | 31.19 | -1.19 | Before |
| REGRESSION.HCC1395_tumor.L007 | 69 | Cycle | Base Insertion | 26056 | 0.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 69 | Cycle | Base Deletion | 26056 | 1.67 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 7 | Cycle | Base Substitution | 26773 | 40.66 | 30.00 | 31.04 | -1.04 | Before |
| REGRESSION.HCC1395_tumor.L007 | 7 | Cycle | Base Insertion | 26773 | 0.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 7 | Cycle | Base Deletion | 26773 | 0.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 70 | Cycle | Base Substitution | 26241 | 30.18 | 31.00 | 31.39 | -0.39 | Before |
| REGRESSION.HCC1395_tumor.L007 | 70 | Cycle | Base Insertion | 26145 | 0.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 70 | Cycle | Base Deletion | 26145 | 1.87 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 71 | Cycle | Base Substitution | 26117 | 42.57 | 30.00 | 31.20 | -1.20 | Before |
| REGRESSION.HCC1395_tumor.L007 | 71 | Cycle | Base Insertion | 26015 | 0.79 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 71 | Cycle | Base Deletion | 26015 | 1.86 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 72 | Cycle | Base Substitution | 26093 | 35.64 | 30.00 | 31.38 | -1.38 | Before |
| REGRESSION.HCC1395_tumor.L007 | 72 | Cycle | Base Insertion | 25979 | 0.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 72 | Cycle | Base Deletion | 25979 | 2.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 73 | Cycle | Base Substitution | 26081 | 42.02 | 29.00 | 30.95 | -1.95 | Before |
| REGRESSION.HCC1395_tumor.L007 | 73 | Cycle | Base Insertion | 25967 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 73 | Cycle | Base Deletion | 25967 | 2.75 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 74 | Cycle | Base Substitution | 26043 | 37.14 | 30.00 | 31.25 | -1.25 | Before |
| REGRESSION.HCC1395_tumor.L007 | 74 | Cycle | Base Insertion | 25920 | 0.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 74 | Cycle | Base Deletion | 25920 | 2.67 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 75 | Cycle | Base Substitution | 26107 | 33.54 | 30.00 | 31.03 | -1.03 | Before |
| REGRESSION.HCC1395_tumor.L007 | 75 | Cycle | Base Insertion | 25965 | 0.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 75 | Cycle | Base Deletion | 25965 | 1.89 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 76 | Cycle | Base Substitution | 25949 | 37.21 | 29.00 | 30.66 | -1.66 | Before |
| REGRESSION.HCC1395_tumor.L007 | 76 | Cycle | Base Insertion | 25828 | 1.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 76 | Cycle | Base Deletion | 25828 | 2.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 77 | Cycle | Base Substitution | 25970 | 39.06 | 30.00 | 31.23 | -1.23 | Before |
| REGRESSION.HCC1395_tumor.L007 | 77 | Cycle | Base Insertion | 25841 | 0.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 77 | Cycle | Base Deletion | 25841 | 1.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 78 | Cycle | Base Substitution | 25877 | 19.86 | 31.00 | 30.84 | 0.16 | Before |
| REGRESSION.HCC1395_tumor.L007 | 78 | Cycle | Base Insertion | 25746 | 0.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 78 | Cycle | Base Deletion | 25746 | 1.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 79 | Cycle | Base Substitution | 25715 | 30.59 | 30.00 | 30.98 | -0.98 | Before |
| REGRESSION.HCC1395_tumor.L007 | 79 | Cycle | Base Insertion | 25577 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 79 | Cycle | Base Deletion | 25577 | 1.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 8 | Cycle | Base Substitution | 26965 | 41.50 | 30.00 | 31.05 | -1.05 | Before |
| REGRESSION.HCC1395_tumor.L007 | 8 | Cycle | Base Insertion | 26965 | 0.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 8 | Cycle | Base Deletion | 26965 | 1.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 80 | Cycle | Base Substitution | 25780 | 48.50 | 29.00 | 30.71 | -1.71 | Before |
| REGRESSION.HCC1395_tumor.L007 | 80 | Cycle | Base Insertion | 25623 | 0.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 80 | Cycle | Base Deletion | 25623 | 1.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 81 | Cycle | Base Substitution | 25732 | 38.48 | 29.00 | 30.90 | -1.90 | Before |
| REGRESSION.HCC1395_tumor.L007 | 81 | Cycle | Base Insertion | 25581 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 81 | Cycle | Base Deletion | 25581 | 1.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 82 | Cycle | Base Substitution | 25707 | 36.30 | 30.00 | 30.95 | -0.95 | Before |
| REGRESSION.HCC1395_tumor.L007 | 82 | Cycle | Base Insertion | 25533 | 0.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 82 | Cycle | Base Deletion | 25533 | 1.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 83 | Cycle | Base Substitution | 25589 | 34.74 | 30.00 | 30.67 | -0.67 | Before |
| REGRESSION.HCC1395_tumor.L007 | 83 | Cycle | Base Insertion | 25415 | 1.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 83 | Cycle | Base Deletion | 25415 | 1.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 84 | Cycle | Base Substitution | 25599 | 40.35 | 29.00 | 30.97 | -1.97 | Before |
| REGRESSION.HCC1395_tumor.L007 | 84 | Cycle | Base Insertion | 25427 | 0.81 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 84 | Cycle | Base Deletion | 25427 | 1.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 85 | Cycle | Base Substitution | 25655 | 37.55 | 29.00 | 30.76 | -1.76 | Before |
| REGRESSION.HCC1395_tumor.L007 | 85 | Cycle | Base Insertion | 25472 | 1.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 85 | Cycle | Base Deletion | 25472 | 1.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 86 | Cycle | Base Substitution | 25626 | 40.67 | 29.00 | 30.66 | -1.66 | Before |
| REGRESSION.HCC1395_tumor.L007 | 86 | Cycle | Base Insertion | 25448 | 0.57 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 86 | Cycle | Base Deletion | 25448 | 0.81 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 87 | Cycle | Base Substitution | 25563 | 44.40 | 29.00 | 30.52 | -1.52 | Before |
| REGRESSION.HCC1395_tumor.L007 | 87 | Cycle | Base Insertion | 25385 | 1.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 87 | Cycle | Base Deletion | 25385 | 0.67 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 88 | Cycle | Base Substitution | 25605 | 32.08 | 30.00 | 30.85 | -0.85 | Before |
| REGRESSION.HCC1395_tumor.L007 | 88 | Cycle | Base Insertion | 25416 | 0.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 88 | Cycle | Base Deletion | 25416 | 0.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 89 | Cycle | Base Substitution | 25396 | 49.55 | 29.00 | 30.28 | -1.28 | Before |
| REGRESSION.HCC1395_tumor.L007 | 89 | Cycle | Base Insertion | 25192 | 0.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 89 | Cycle | Base Deletion | 25192 | 0.65 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 9 | Cycle | Base Substitution | 26917 | 34.83 | 30.00 | 31.03 | -1.03 | Before |
| REGRESSION.HCC1395_tumor.L007 | 9 | Cycle | Base Insertion | 26917 | 0.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 9 | Cycle | Base Deletion | 26917 | 1.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 90 | Cycle | Base Substitution | 25375 | 40.47 | 29.00 | 30.78 | -1.78 | Before |
| REGRESSION.HCC1395_tumor.L007 | 90 | Cycle | Base Insertion | 25148 | 0.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 90 | Cycle | Base Deletion | 25148 | 0.92 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 91 | Cycle | Base Substitution | 25240 | 32.39 | 30.00 | 30.84 | -0.84 | Before |
| REGRESSION.HCC1395_tumor.L007 | 91 | Cycle | Base Insertion | 24996 | 0.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 91 | Cycle | Base Deletion | 24996 | 0.92 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 92 | Cycle | Base Substitution | 25366 | 36.80 | 29.00 | 30.42 | -1.42 | Before |
| REGRESSION.HCC1395_tumor.L007 | 92 | Cycle | Base Insertion | 25126 | 0.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 92 | Cycle | Base Deletion | 25126 | 0.86 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 93 | Cycle | Base Substitution | 25288 | 40.10 | 29.00 | 30.41 | -1.41 | Before |
| REGRESSION.HCC1395_tumor.L007 | 93 | Cycle | Base Insertion | 25063 | 0.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 93 | Cycle | Base Deletion | 25063 | 0.82 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 94 | Cycle | Base Substitution | 25187 | 36.22 | 30.00 | 30.76 | -0.76 | Before |
| REGRESSION.HCC1395_tumor.L007 | 94 | Cycle | Base Insertion | 24966 | 0.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 94 | Cycle | Base Deletion | 24966 | 0.83 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 95 | Cycle | Base Substitution | 25111 | 39.30 | 29.00 | 30.72 | -1.72 | Before |
| REGRESSION.HCC1395_tumor.L007 | 95 | Cycle | Base Insertion | 24892 | 0.52 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 95 | Cycle | Base Deletion | 24892 | 1.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 96 | Cycle | Base Substitution | 25103 | 39.12 | 29.00 | 30.84 | -1.84 | Before |
| REGRESSION.HCC1395_tumor.L007 | 96 | Cycle | Base Insertion | 24879 | 0.94 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 96 | Cycle | Base Deletion | 24879 | 1.01 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 97 | Cycle | Base Substitution | 25010 | 49.92 | 29.00 | 30.68 | -1.68 | Before |
| REGRESSION.HCC1395_tumor.L007 | 97 | Cycle | Base Insertion | 24786 | 1.93 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 97 | Cycle | Base Deletion | 24786 | 0.87 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 98 | Cycle | Base Substitution | 25019 | 55.78 | 29.00 | 30.29 | -1.29 | Before |
| REGRESSION.HCC1395_tumor.L007 | 98 | Cycle | Base Insertion | 24795 | 0.85 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 98 | Cycle | Base Deletion | 24795 | 0.82 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 99 | Cycle | Base Substitution | 24892 | 32.12 | 30.00 | 30.80 | -0.80 | Before |
| REGRESSION.HCC1395_tumor.L007 | 99 | Cycle | Base Insertion | 24655 | 0.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 99 | Cycle | Base Deletion | 24655 | 0.95 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 12 | QualityScore | Base Substitution | 80008 | 7808.93 | 10.00 | 12.00 | -2.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 24 | QualityScore | Base Substitution | 196175 | 759.14 | 24.00 | 24.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 40 | QualityScore | Base Substitution | 7301819 | 5331.19 | 31.00 | 40.00 | -9.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 45 | QualityScore | Base Insertion | 7578002 | 133.89 | 47.00 | 45.00 | 2.00 | Before |
| REGRESSION.HCC1395_tumor.L007 | 45 | QualityScore | Base Deletion | 7578002 | 341.03 | 44.00 | 45.00 | -1.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | AA | Context | Base Substitution | 522554 | 1337.19 | 26.00 | 29.50 | -3.50 | Before |
| REGRESSION.HCC1395_tumor.L008 | AAA | Context | Base Insertion | 177130 | 21.32 | 44.00 | 45.00 | -1.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | AAA | Context | Base Deletion | 177130 | 70.41 | 42.00 | 45.00 | -3.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | AAC | Context | Base Insertion | 85144 | 0.67 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | AAC | Context | Base Deletion | 85144 | 1.91 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | AAG | Context | Base Insertion | 134076 | 1.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | AAG | Context | Base Deletion | 134076 | 5.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | AAT | Context | Base Insertion | 101492 | 0.07 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | AAT | Context | Base Deletion | 101492 | 2.88 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | AC | Context | Base Substitution | 356166 | 1194.43 | 25.00 | 28.67 | -3.67 | Before |
| REGRESSION.HCC1395_tumor.L008 | ACA | Context | Base Insertion | 131318 | 4.02 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | ACA | Context | Base Deletion | 131318 | 6.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | ACC | Context | Base Insertion | 104602 | 3.83 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | ACC | Context | Base Deletion | 104602 | 2.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | ACG | Context | Base Insertion | 20908 | 0.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | ACG | Context | Base Deletion | 20908 | 1.83 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | ACT | Context | Base Insertion | 104739 | 1.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | ACT | Context | Base Deletion | 104739 | 4.87 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | AG | Context | Base Substitution | 559616 | 558.24 | 30.00 | 31.72 | -1.72 | Before |
| REGRESSION.HCC1395_tumor.L008 | AGA | Context | Base Insertion | 151288 | 2.02 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | AGA | Context | Base Deletion | 151288 | 6.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | AGC | Context | Base Insertion | 139532 | 0.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | AGC | Context | Base Deletion | 139532 | 4.61 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | AGG | Context | Base Insertion | 162907 | 9.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | AGG | Context | Base Deletion | 162907 | 4.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | AGT | Context | Base Insertion | 102401 | 0.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | AGT | Context | Base Deletion | 102401 | 5.80 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | AT | Context | Base Substitution | 369756 | 483.90 | 29.00 | 32.00 | -3.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | ATA | Context | Base Insertion | 74612 | 1.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | ATA | Context | Base Deletion | 74612 | 1.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | ATC | Context | Base Insertion | 79091 | 0.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | ATC | Context | Base Deletion | 79091 | 1.07 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | ATG | Context | Base Insertion | 114937 | 1.01 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | ATG | Context | Base Deletion | 114937 | 1.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | ATT | Context | Base Insertion | 108842 | 1.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | ATT | Context | Base Deletion | 108842 | 2.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | CA | Context | Base Substitution | 592406 | 1289.07 | 27.00 | 29.88 | -2.88 | Before |
| REGRESSION.HCC1395_tumor.L008 | CAA | Context | Base Insertion | 112270 | 1.93 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | CAA | Context | Base Deletion | 112270 | 4.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | CAC | Context | Base Insertion | 125187 | 7.12 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | CAC | Context | Base Deletion | 125187 | 6.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | CAG | Context | Base Insertion | 211667 | 4.99 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | CAG | Context | Base Deletion | 211667 | 11.69 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | CAT | Context | Base Insertion | 111403 | 0.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | CAT | Context | Base Deletion | 111403 | 3.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | CC | Context | Base Substitution | 553218 | 1742.21 | 25.00 | 28.89 | -3.89 | Before |
| REGRESSION.HCC1395_tumor.L008 | CCA | Context | Base Insertion | 176513 | 3.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | CCA | Context | Base Deletion | 176513 | 2.89 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | CCC | Context | Base Insertion | 152392 | 4.87 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | CCC | Context | Base Deletion | 152392 | 9.09 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | CCG | Context | Base Insertion | 37704 | 1.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | CCG | Context | Base Deletion | 37704 | 1.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | CCT | Context | Base Insertion | 178170 | 1.66 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | CCT | Context | Base Deletion | 178170 | 6.74 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | CG | Context | Base Substitution | 114657 | 337.93 | 26.00 | 29.80 | -3.80 | Before |
| REGRESSION.HCC1395_tumor.L008 | CGA | Context | Base Insertion | 44463 | 4.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | CGA | Context | Base Deletion | 44463 | 0.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | CGC | Context | Base Insertion | 63703 | 0.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | CGC | Context | Base Deletion | 63703 | 2.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | CGG | Context | Base Insertion | 76977 | 0.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | CGG | Context | Base Deletion | 76977 | 2.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | CGT | Context | Base Insertion | 49235 | 0.07 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | CGT | Context | Base Deletion | 49235 | 0.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | CT | Context | Base Substitution | 596260 | 444.74 | 31.00 | 32.36 | -1.36 | Before |
| REGRESSION.HCC1395_tumor.L008 | CTA | Context | Base Insertion | 58487 | 0.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | CTA | Context | Base Deletion | 58487 | 3.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | CTC | Context | Base Insertion | 146101 | 1.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | CTC | Context | Base Deletion | 146101 | 8.85 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | CTG | Context | Base Insertion | 213535 | 0.86 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | CTG | Context | Base Deletion | 213535 | 5.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | CTT | Context | Base Insertion | 146055 | 4.80 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | CTT | Context | Base Deletion | 146055 | 5.07 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | GA | Context | Base Substitution | 494542 | 830.89 | 28.00 | 29.62 | -1.62 | Before |
| REGRESSION.HCC1395_tumor.L008 | GAA | Context | Base Insertion | 140859 | 1.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | GAA | Context | Base Deletion | 140859 | 3.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | GAC | Context | Base Insertion | 83590 | 0.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | GAC | Context | Base Deletion | 83590 | 1.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | GAG | Context | Base Insertion | 149551 | 0.12 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | GAG | Context | Base Deletion | 149551 | 5.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | GAT | Context | Base Insertion | 83481 | 0.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | GAT | Context | Base Deletion | 83481 | 1.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | GC | Context | Base Substitution | 487771 | 1124.73 | 27.00 | 30.25 | -3.25 | Before |
| REGRESSION.HCC1395_tumor.L008 | GCA | Context | Base Insertion | 147704 | 1.75 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | GCA | Context | Base Deletion | 147704 | 5.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | GCC | Context | Base Insertion | 147269 | 0.82 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | GCC | Context | Base Deletion | 147269 | 5.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | GCG | Context | Base Insertion | 36691 | 1.75 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | GCG | Context | Base Deletion | 36691 | 1.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | GCT | Context | Base Insertion | 155638 | 1.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | GCT | Context | Base Deletion | 155638 | 2.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | GG | Context | Base Substitution | 576604 | 732.25 | 29.00 | 31.67 | -2.67 | Before |
| REGRESSION.HCC1395_tumor.L008 | GGA | Context | Base Insertion | 156419 | 1.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | GGA | Context | Base Deletion | 156419 | 5.09 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | GGC | Context | Base Insertion | 145250 | 2.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | GGC | Context | Base Deletion | 145250 | 5.87 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | GGG | Context | Base Insertion | 158398 | 2.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | GGG | Context | Base Deletion | 158398 | 11.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | GGT | Context | Base Insertion | 115029 | 2.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | GGT | Context | Base Deletion | 115029 | 1.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | GT | Context | Base Substitution | 407923 | 700.34 | 28.00 | 32.00 | -4.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | GTA | Context | Base Insertion | 65885 | 1.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | GTA | Context | Base Deletion | 65885 | 0.86 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | GTC | Context | Base Insertion | 91269 | 1.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | GTC | Context | Base Deletion | 91269 | 0.98 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | GTG | Context | Base Insertion | 139970 | 1.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | GTG | Context | Base Deletion | 139970 | 9.81 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | GTT | Context | Base Insertion | 99660 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | GTT | Context | Base Deletion | 99660 | 1.97 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | TA | Context | Base Substitution | 288240 | 774.31 | 26.00 | 29.67 | -3.67 | Before |
| REGRESSION.HCC1395_tumor.L008 | TAA | Context | Base Insertion | 87817 | 3.52 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | TAA | Context | Base Deletion | 87817 | 3.97 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | TAC | Context | Base Insertion | 59964 | 0.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | TAC | Context | Base Deletion | 59964 | 3.66 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | TAG | Context | Base Insertion | 59815 | 0.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | TAG | Context | Base Deletion | 59815 | 0.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | TAT | Context | Base Insertion | 70647 | 1.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | TAT | Context | Base Deletion | 70647 | 1.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | TC | Context | Base Substitution | 448901 | 1045.66 | 27.00 | 30.44 | -3.44 | Before |
| REGRESSION.HCC1395_tumor.L008 | TCA | Context | Base Insertion | 132154 | 2.76 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | TCA | Context | Base Deletion | 132154 | 6.79 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | TCC | Context | Base Insertion | 145295 | 0.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | TCC | Context | Base Deletion | 145295 | 4.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | TCG | Context | Base Insertion | 18501 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | TCG | Context | Base Deletion | 18501 | 0.04 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | TCT | Context | Base Insertion | 153590 | 1.01 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | TCT | Context | Base Deletion | 153590 | 5.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | TG | Context | Base Substitution | 586280 | 434.98 | 31.00 | 31.68 | -0.68 | Before |
| REGRESSION.HCC1395_tumor.L008 | TGA | Context | Base Insertion | 138622 | 0.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | TGA | Context | Base Deletion | 138622 | 2.60 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | TGC | Context | Base Insertion | 136120 | 1.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | TGC | Context | Base Deletion | 136120 | 1.85 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | TGG | Context | Base Insertion | 174018 | 1.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | TGG | Context | Base Deletion | 174018 | 3.94 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | TGT | Context | Base Insertion | 138478 | 0.65 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | TGT | Context | Base Deletion | 138478 | 9.81 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | TT | Context | Base Substitution | 538152 | 731.19 | 29.00 | 32.75 | -3.75 | Before |
| REGRESSION.HCC1395_tumor.L008 | TTA | Context | Base Insertion | 87076 | 3.04 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | TTA | Context | Base Deletion | 87076 | 3.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | TTC | Context | Base Insertion | 129639 | 0.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | TTC | Context | Base Deletion | 129639 | 6.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | TTG | Context | Base Insertion | 113746 | 0.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | TTG | Context | Base Deletion | 113746 | 2.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | TTT | Context | Base Insertion | 179960 | 15.14 | 44.00 | 45.00 | -1.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | TTT | Context | Base Deletion | 179960 | 56.24 | 42.00 | 45.00 | -3.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -1 | Cycle | Base Substitution | 26534 | 106.48 | 24.00 | 25.78 | -1.78 | Before |
| REGRESSION.HCC1395_tumor.L008 | -10 | Cycle | Base Substitution | 26879 | 41.59 | 30.00 | 31.58 | -1.58 | Before |
| REGRESSION.HCC1395_tumor.L008 | -10 | Cycle | Base Insertion | 26879 | 0.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -10 | Cycle | Base Deletion | 26879 | 1.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -100 | Cycle | Base Substitution | 24833 | 49.18 | 28.00 | 29.94 | -1.94 | Before |
| REGRESSION.HCC1395_tumor.L008 | -100 | Cycle | Base Insertion | 24615 | 1.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -100 | Cycle | Base Deletion | 24615 | 1.66 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -101 | Cycle | Base Substitution | 24876 | 55.71 | 29.00 | 30.05 | -1.05 | Before |
| REGRESSION.HCC1395_tumor.L008 | -101 | Cycle | Base Insertion | 24670 | 0.73 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -101 | Cycle | Base Deletion | 24670 | 1.74 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -102 | Cycle | Base Substitution | 24810 | 32.10 | 30.00 | 30.43 | -0.43 | Before |
| REGRESSION.HCC1395_tumor.L008 | -102 | Cycle | Base Insertion | 24593 | 0.60 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -102 | Cycle | Base Deletion | 24593 | 1.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -103 | Cycle | Base Substitution | 24671 | 55.41 | 29.00 | 30.02 | -1.02 | Before |
| REGRESSION.HCC1395_tumor.L008 | -103 | Cycle | Base Insertion | 24432 | 0.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -103 | Cycle | Base Deletion | 24432 | 1.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -104 | Cycle | Base Substitution | 24605 | 46.08 | 29.00 | 30.19 | -1.19 | Before |
| REGRESSION.HCC1395_tumor.L008 | -104 | Cycle | Base Insertion | 24340 | 0.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -104 | Cycle | Base Deletion | 24340 | 1.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -105 | Cycle | Base Substitution | 24638 | 53.95 | 29.00 | 30.05 | -1.05 | Before |
| REGRESSION.HCC1395_tumor.L008 | -105 | Cycle | Base Insertion | 24368 | 0.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -105 | Cycle | Base Deletion | 24368 | 1.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -106 | Cycle | Base Substitution | 24422 | 42.58 | 29.00 | 30.08 | -1.08 | Before |
| REGRESSION.HCC1395_tumor.L008 | -106 | Cycle | Base Insertion | 24167 | 0.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -106 | Cycle | Base Deletion | 24167 | 0.86 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -107 | Cycle | Base Substitution | 24447 | 35.48 | 29.00 | 30.00 | -1.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -107 | Cycle | Base Insertion | 24191 | 0.82 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -107 | Cycle | Base Deletion | 24191 | 0.67 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -108 | Cycle | Base Substitution | 24418 | 53.09 | 28.00 | 29.96 | -1.96 | Before |
| REGRESSION.HCC1395_tumor.L008 | -108 | Cycle | Base Insertion | 24165 | 1.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -108 | Cycle | Base Deletion | 24165 | 0.92 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -109 | Cycle | Base Substitution | 24484 | 53.73 | 28.00 | 29.87 | -1.87 | Before |
| REGRESSION.HCC1395_tumor.L008 | -109 | Cycle | Base Insertion | 24220 | 0.21 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -109 | Cycle | Base Deletion | 24220 | 1.02 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -11 | Cycle | Base Substitution | 26894 | 41.34 | 30.00 | 31.29 | -1.29 | Before |
| REGRESSION.HCC1395_tumor.L008 | -11 | Cycle | Base Insertion | 26894 | 0.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -11 | Cycle | Base Deletion | 26894 | 1.74 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -110 | Cycle | Base Substitution | 24318 | 43.11 | 29.00 | 30.15 | -1.15 | Before |
| REGRESSION.HCC1395_tumor.L008 | -110 | Cycle | Base Insertion | 24025 | 0.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -110 | Cycle | Base Deletion | 24025 | 1.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -111 | Cycle | Base Substitution | 24268 | 42.01 | 29.00 | 30.09 | -1.09 | Before |
| REGRESSION.HCC1395_tumor.L008 | -111 | Cycle | Base Insertion | 23966 | 0.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -111 | Cycle | Base Deletion | 23966 | 1.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -112 | Cycle | Base Substitution | 24250 | 53.01 | 29.00 | 30.31 | -1.31 | Before |
| REGRESSION.HCC1395_tumor.L008 | -112 | Cycle | Base Insertion | 23956 | 0.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -112 | Cycle | Base Deletion | 23956 | 1.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -113 | Cycle | Base Substitution | 24141 | 64.98 | 28.00 | 29.69 | -1.69 | Before |
| REGRESSION.HCC1395_tumor.L008 | -113 | Cycle | Base Insertion | 23837 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -113 | Cycle | Base Deletion | 23837 | 1.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -114 | Cycle | Base Substitution | 23962 | 39.98 | 29.00 | 29.62 | -0.62 | Before |
| REGRESSION.HCC1395_tumor.L008 | -114 | Cycle | Base Insertion | 23648 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -114 | Cycle | Base Deletion | 23648 | 1.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -115 | Cycle | Base Substitution | 23991 | 46.49 | 28.00 | 29.81 | -1.81 | Before |
| REGRESSION.HCC1395_tumor.L008 | -115 | Cycle | Base Insertion | 23668 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -115 | Cycle | Base Deletion | 23668 | 1.60 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -116 | Cycle | Base Substitution | 23923 | 39.61 | 29.00 | 29.81 | -0.81 | Before |
| REGRESSION.HCC1395_tumor.L008 | -116 | Cycle | Base Insertion | 23591 | 0.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -116 | Cycle | Base Deletion | 23591 | 1.76 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -117 | Cycle | Base Substitution | 23825 | 45.21 | 28.00 | 29.82 | -1.82 | Before |
| REGRESSION.HCC1395_tumor.L008 | -117 | Cycle | Base Insertion | 23503 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -117 | Cycle | Base Deletion | 23503 | 1.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -118 | Cycle | Base Substitution | 23772 | 49.01 | 28.00 | 29.74 | -1.74 | Before |
| REGRESSION.HCC1395_tumor.L008 | -118 | Cycle | Base Insertion | 23460 | 0.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -118 | Cycle | Base Deletion | 23460 | 1.01 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -119 | Cycle | Base Substitution | 23738 | 56.60 | 29.00 | 30.04 | -1.04 | Before |
| REGRESSION.HCC1395_tumor.L008 | -119 | Cycle | Base Insertion | 23415 | 0.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -119 | Cycle | Base Deletion | 23415 | 1.02 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -12 | Cycle | Base Substitution | 26860 | 31.18 | 31.00 | 31.47 | -0.47 | Before |
| REGRESSION.HCC1395_tumor.L008 | -12 | Cycle | Base Insertion | 26860 | 0.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -12 | Cycle | Base Deletion | 26860 | 1.02 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -120 | Cycle | Base Substitution | 23684 | 57.70 | 29.00 | 30.02 | -1.02 | Before |
| REGRESSION.HCC1395_tumor.L008 | -120 | Cycle | Base Insertion | 23378 | 0.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -120 | Cycle | Base Deletion | 23378 | 0.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -121 | Cycle | Base Substitution | 23473 | 42.37 | 28.00 | 29.98 | -1.98 | Before |
| REGRESSION.HCC1395_tumor.L008 | -121 | Cycle | Base Insertion | 23166 | 0.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -121 | Cycle | Base Deletion | 23166 | 0.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -122 | Cycle | Base Substitution | 23510 | 43.27 | 29.00 | 30.08 | -1.08 | Before |
| REGRESSION.HCC1395_tumor.L008 | -122 | Cycle | Base Insertion | 23202 | 0.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -122 | Cycle | Base Deletion | 23202 | 0.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -123 | Cycle | Base Substitution | 23447 | 44.79 | 28.00 | 29.93 | -1.93 | Before |
| REGRESSION.HCC1395_tumor.L008 | -123 | Cycle | Base Insertion | 23138 | 0.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -123 | Cycle | Base Deletion | 23138 | 0.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -124 | Cycle | Base Substitution | 23339 | 45.87 | 28.00 | 29.71 | -1.71 | Before |
| REGRESSION.HCC1395_tumor.L008 | -124 | Cycle | Base Insertion | 23042 | 0.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -124 | Cycle | Base Deletion | 23042 | 0.80 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -125 | Cycle | Base Substitution | 23370 | 48.20 | 28.00 | 29.58 | -1.58 | Before |
| REGRESSION.HCC1395_tumor.L008 | -125 | Cycle | Base Insertion | 23061 | 0.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -125 | Cycle | Base Deletion | 23061 | 1.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -126 | Cycle | Base Substitution | 23231 | 51.75 | 28.00 | 29.50 | -1.50 | Before |
| REGRESSION.HCC1395_tumor.L008 | -126 | Cycle | Base Insertion | 22905 | 0.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -126 | Cycle | Base Deletion | 22905 | 1.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -127 | Cycle | Base Substitution | 23204 | 59.57 | 28.00 | 29.38 | -1.38 | Before |
| REGRESSION.HCC1395_tumor.L008 | -127 | Cycle | Base Insertion | 22900 | 0.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -127 | Cycle | Base Deletion | 22900 | 1.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -128 | Cycle | Base Substitution | 23012 | 48.30 | 28.00 | 29.90 | -1.90 | Before |
| REGRESSION.HCC1395_tumor.L008 | -128 | Cycle | Base Insertion | 22707 | 0.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -128 | Cycle | Base Deletion | 22707 | 1.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -129 | Cycle | Base Substitution | 22918 | 45.82 | 28.00 | 29.77 | -1.77 | Before |
| REGRESSION.HCC1395_tumor.L008 | -129 | Cycle | Base Insertion | 22595 | 0.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -129 | Cycle | Base Deletion | 22595 | 1.03 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -13 | Cycle | Base Substitution | 26816 | 41.77 | 30.00 | 31.73 | -1.73 | Before |
| REGRESSION.HCC1395_tumor.L008 | -13 | Cycle | Base Insertion | 26816 | 0.67 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -13 | Cycle | Base Deletion | 26816 | 1.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -130 | Cycle | Base Substitution | 22986 | 49.01 | 28.00 | 29.77 | -1.77 | Before |
| REGRESSION.HCC1395_tumor.L008 | -130 | Cycle | Base Insertion | 22666 | 0.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -130 | Cycle | Base Deletion | 22666 | 1.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -131 | Cycle | Base Substitution | 22858 | 39.34 | 29.00 | 29.77 | -0.77 | Before |
| REGRESSION.HCC1395_tumor.L008 | -131 | Cycle | Base Insertion | 22538 | 0.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -131 | Cycle | Base Deletion | 22538 | 1.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -132 | Cycle | Base Substitution | 22828 | 48.75 | 28.00 | 29.87 | -1.87 | Before |
| REGRESSION.HCC1395_tumor.L008 | -132 | Cycle | Base Insertion | 22509 | 0.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -132 | Cycle | Base Deletion | 22509 | 1.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -133 | Cycle | Base Substitution | 22736 | 43.05 | 29.00 | 30.06 | -1.06 | Before |
| REGRESSION.HCC1395_tumor.L008 | -133 | Cycle | Base Insertion | 22422 | 0.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -133 | Cycle | Base Deletion | 22422 | 1.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -134 | Cycle | Base Substitution | 22655 | 49.36 | 28.00 | 30.00 | -2.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -134 | Cycle | Base Insertion | 22314 | 0.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -134 | Cycle | Base Deletion | 22314 | 0.86 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -135 | Cycle | Base Substitution | 22602 | 41.93 | 28.00 | 29.94 | -1.94 | Before |
| REGRESSION.HCC1395_tumor.L008 | -135 | Cycle | Base Insertion | 22259 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -135 | Cycle | Base Deletion | 22259 | 0.76 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -136 | Cycle | Base Substitution | 22425 | 43.71 | 28.00 | 29.43 | -1.43 | Before |
| REGRESSION.HCC1395_tumor.L008 | -136 | Cycle | Base Insertion | 22079 | 0.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -136 | Cycle | Base Deletion | 22079 | 0.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -137 | Cycle | Base Substitution | 22416 | 47.30 | 28.00 | 29.69 | -1.69 | Before |
| REGRESSION.HCC1395_tumor.L008 | -137 | Cycle | Base Insertion | 22059 | 0.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -137 | Cycle | Base Deletion | 22059 | 0.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -138 | Cycle | Base Substitution | 22343 | 39.36 | 29.00 | 29.89 | -0.89 | Before |
| REGRESSION.HCC1395_tumor.L008 | -138 | Cycle | Base Insertion | 22004 | 0.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -138 | Cycle | Base Deletion | 22004 | 0.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -139 | Cycle | Base Substitution | 22251 | 49.87 | 28.00 | 29.87 | -1.87 | Before |
| REGRESSION.HCC1395_tumor.L008 | -139 | Cycle | Base Insertion | 21930 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -139 | Cycle | Base Deletion | 21930 | 0.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -14 | Cycle | Base Substitution | 26752 | 44.88 | 30.00 | 31.66 | -1.66 | Before |
| REGRESSION.HCC1395_tumor.L008 | -14 | Cycle | Base Insertion | 26752 | 0.67 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -14 | Cycle | Base Deletion | 26752 | 1.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -140 | Cycle | Base Substitution | 22127 | 37.40 | 29.00 | 29.54 | -0.54 | Before |
| REGRESSION.HCC1395_tumor.L008 | -140 | Cycle | Base Insertion | 21746 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -140 | Cycle | Base Deletion | 21746 | 0.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -141 | Cycle | Base Substitution | 22130 | 36.80 | 29.00 | 29.70 | -0.70 | Before |
| REGRESSION.HCC1395_tumor.L008 | -141 | Cycle | Base Insertion | 21743 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -141 | Cycle | Base Deletion | 21743 | 0.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -142 | Cycle | Base Substitution | 21981 | 38.73 | 28.00 | 29.52 | -1.52 | Before |
| REGRESSION.HCC1395_tumor.L008 | -142 | Cycle | Base Insertion | 21540 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -142 | Cycle | Base Deletion | 21540 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -143 | Cycle | Base Substitution | 21899 | 39.71 | 28.00 | 29.91 | -1.91 | Before |
| REGRESSION.HCC1395_tumor.L008 | -143 | Cycle | Base Insertion | 21428 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -143 | Cycle | Base Deletion | 21428 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -144 | Cycle | Base Substitution | 21809 | 35.48 | 29.00 | 29.59 | -0.59 | Before |
| REGRESSION.HCC1395_tumor.L008 | -144 | Cycle | Base Insertion | 21314 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -144 | Cycle | Base Deletion | 21314 | 0.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -145 | Cycle | Base Substitution | 21735 | 44.46 | 28.00 | 29.75 | -1.75 | Before |
| REGRESSION.HCC1395_tumor.L008 | -145 | Cycle | Base Insertion | 16588 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -145 | Cycle | Base Deletion | 16588 | 0.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -146 | Cycle | Base Substitution | 21556 | 73.43 | 28.00 | 30.25 | -2.25 | Before |
| REGRESSION.HCC1395_tumor.L008 | -146 | Cycle | Base Insertion | 16518 | 2.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -146 | Cycle | Base Deletion | 16518 | 0.57 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -147 | Cycle | Base Substitution | 21450 | 240.44 | 23.00 | 30.01 | -7.01 | Before |
| REGRESSION.HCC1395_tumor.L008 | -148 | Cycle | Base Substitution | 21357 | 852.28 | 15.00 | 30.26 | -15.26 | Before |
| REGRESSION.HCC1395_tumor.L008 | -149 | Cycle | Base Substitution | 13232 | 779.06 | 14.00 | 30.53 | -16.53 | Before |
| REGRESSION.HCC1395_tumor.L008 | -15 | Cycle | Base Substitution | 27006 | 26.76 | 31.00 | 31.48 | -0.48 | Before |
| REGRESSION.HCC1395_tumor.L008 | -15 | Cycle | Base Insertion | 27006 | 0.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -15 | Cycle | Base Deletion | 27006 | 1.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -150 | Cycle | Base Substitution | 4705 | 5.84 | 30.00 | 30.59 | -0.59 | Before |
| REGRESSION.HCC1395_tumor.L008 | -16 | Cycle | Base Substitution | 26935 | 41.24 | 30.00 | 31.68 | -1.68 | Before |
| REGRESSION.HCC1395_tumor.L008 | -16 | Cycle | Base Insertion | 26935 | 1.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -16 | Cycle | Base Deletion | 26935 | 1.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -17 | Cycle | Base Substitution | 26778 | 47.46 | 30.00 | 31.08 | -1.08 | Before |
| REGRESSION.HCC1395_tumor.L008 | -17 | Cycle | Base Insertion | 26778 | 0.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -17 | Cycle | Base Deletion | 26778 | 2.02 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -18 | Cycle | Base Substitution | 26817 | 37.55 | 30.00 | 31.87 | -1.87 | Before |
| REGRESSION.HCC1395_tumor.L008 | -18 | Cycle | Base Insertion | 26817 | 0.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -18 | Cycle | Base Deletion | 26817 | 1.95 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -19 | Cycle | Base Substitution | 26807 | 45.30 | 30.00 | 31.38 | -1.38 | Before |
| REGRESSION.HCC1395_tumor.L008 | -19 | Cycle | Base Insertion | 26807 | 1.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -19 | Cycle | Base Deletion | 26807 | 1.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -2 | Cycle | Base Substitution | 27099 | 70.23 | 27.00 | 28.43 | -1.43 | Before |
| REGRESSION.HCC1395_tumor.L008 | -20 | Cycle | Base Substitution | 26812 | 33.06 | 30.00 | 31.83 | -1.83 | Before |
| REGRESSION.HCC1395_tumor.L008 | -20 | Cycle | Base Insertion | 26812 | 0.67 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -20 | Cycle | Base Deletion | 26812 | 2.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -21 | Cycle | Base Substitution | 26664 | 28.63 | 31.00 | 31.72 | -0.72 | Before |
| REGRESSION.HCC1395_tumor.L008 | -21 | Cycle | Base Insertion | 26664 | 1.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -21 | Cycle | Base Deletion | 26664 | 1.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -22 | Cycle | Base Substitution | 26809 | 43.57 | 30.00 | 31.93 | -1.93 | Before |
| REGRESSION.HCC1395_tumor.L008 | -22 | Cycle | Base Insertion | 26809 | 1.87 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -22 | Cycle | Base Deletion | 26809 | 1.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -23 | Cycle | Base Substitution | 26794 | 47.42 | 30.00 | 31.54 | -1.54 | Before |
| REGRESSION.HCC1395_tumor.L008 | -23 | Cycle | Base Insertion | 26794 | 0.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -23 | Cycle | Base Deletion | 26794 | 0.94 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -24 | Cycle | Base Substitution | 26743 | 34.40 | 30.00 | 31.50 | -1.50 | Before |
| REGRESSION.HCC1395_tumor.L008 | -24 | Cycle | Base Insertion | 26743 | 0.89 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -24 | Cycle | Base Deletion | 26743 | 1.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -25 | Cycle | Base Substitution | 26715 | 41.50 | 31.00 | 32.01 | -1.01 | Before |
| REGRESSION.HCC1395_tumor.L008 | -25 | Cycle | Base Insertion | 26715 | 1.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -25 | Cycle | Base Deletion | 26715 | 0.87 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -26 | Cycle | Base Substitution | 26708 | 45.82 | 29.00 | 30.16 | -1.16 | Before |
| REGRESSION.HCC1395_tumor.L008 | -26 | Cycle | Base Insertion | 26708 | 0.90 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -26 | Cycle | Base Deletion | 26708 | 0.98 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -27 | Cycle | Base Substitution | 26718 | 39.13 | 29.00 | 30.22 | -1.22 | Before |
| REGRESSION.HCC1395_tumor.L008 | -27 | Cycle | Base Insertion | 26718 | 1.07 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -27 | Cycle | Base Deletion | 26718 | 1.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -28 | Cycle | Base Substitution | 26571 | 32.48 | 30.00 | 30.08 | -0.08 | Before |
| REGRESSION.HCC1395_tumor.L008 | -28 | Cycle | Base Insertion | 26571 | 1.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -28 | Cycle | Base Deletion | 26571 | 1.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -29 | Cycle | Base Substitution | 26756 | 35.58 | 30.00 | 30.01 | -0.01 | Before |
| REGRESSION.HCC1395_tumor.L008 | -29 | Cycle | Base Insertion | 26755 | 0.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -29 | Cycle | Base Deletion | 26755 | 2.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -3 | Cycle | Base Substitution | 27018 | 65.91 | 28.00 | 29.93 | -1.93 | Before |
| REGRESSION.HCC1395_tumor.L008 | -30 | Cycle | Base Substitution | 26732 | 42.74 | 29.00 | 30.39 | -1.39 | Before |
| REGRESSION.HCC1395_tumor.L008 | -30 | Cycle | Base Insertion | 26731 | 0.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -30 | Cycle | Base Deletion | 26731 | 1.80 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -31 | Cycle | Base Substitution | 26676 | 51.39 | 28.00 | 29.95 | -1.95 | Before |
| REGRESSION.HCC1395_tumor.L008 | -31 | Cycle | Base Insertion | 26674 | 0.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -31 | Cycle | Base Deletion | 26674 | 1.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -32 | Cycle | Base Substitution | 26614 | 30.23 | 30.00 | 30.13 | -0.13 | Before |
| REGRESSION.HCC1395_tumor.L008 | -32 | Cycle | Base Insertion | 26612 | 0.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -32 | Cycle | Base Deletion | 26612 | 2.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -33 | Cycle | Base Substitution | 26665 | 42.41 | 29.00 | 30.15 | -1.15 | Before |
| REGRESSION.HCC1395_tumor.L008 | -33 | Cycle | Base Insertion | 26664 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -33 | Cycle | Base Deletion | 26664 | 1.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -34 | Cycle | Base Substitution | 26652 | 31.70 | 30.00 | 30.42 | -0.42 | Before |
| REGRESSION.HCC1395_tumor.L008 | -34 | Cycle | Base Insertion | 26649 | 0.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -34 | Cycle | Base Deletion | 26649 | 1.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -35 | Cycle | Base Substitution | 26635 | 39.41 | 29.00 | 30.72 | -1.72 | Before |
| REGRESSION.HCC1395_tumor.L008 | -35 | Cycle | Base Insertion | 26634 | 0.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -35 | Cycle | Base Deletion | 26634 | 1.75 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -36 | Cycle | Base Substitution | 26752 | 43.59 | 29.00 | 30.51 | -1.51 | Before |
| REGRESSION.HCC1395_tumor.L008 | -36 | Cycle | Base Insertion | 26751 | 0.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -36 | Cycle | Base Deletion | 26751 | 1.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -37 | Cycle | Base Substitution | 26591 | 31.44 | 30.00 | 30.15 | -0.15 | Before |
| REGRESSION.HCC1395_tumor.L008 | -37 | Cycle | Base Insertion | 26590 | 0.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -37 | Cycle | Base Deletion | 26590 | 0.88 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -38 | Cycle | Base Substitution | 26557 | 38.01 | 29.00 | 30.72 | -1.72 | Before |
| REGRESSION.HCC1395_tumor.L008 | -38 | Cycle | Base Insertion | 26556 | 0.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -38 | Cycle | Base Deletion | 26556 | 1.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -39 | Cycle | Base Substitution | 26564 | 36.98 | 30.00 | 30.73 | -0.73 | Before |
| REGRESSION.HCC1395_tumor.L008 | -39 | Cycle | Base Insertion | 26563 | 0.39 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -39 | Cycle | Base Deletion | 26563 | 1.65 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -4 | Cycle | Base Substitution | 26951 | 76.52 | 27.00 | 29.80 | -2.80 | Before |
| REGRESSION.HCC1395_tumor.L008 | -40 | Cycle | Base Substitution | 26524 | 33.31 | 30.00 | 30.77 | -0.77 | Before |
| REGRESSION.HCC1395_tumor.L008 | -40 | Cycle | Base Insertion | 26523 | 0.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -40 | Cycle | Base Deletion | 26523 | 1.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -41 | Cycle | Base Substitution | 26624 | 40.68 | 29.00 | 30.29 | -1.29 | Before |
| REGRESSION.HCC1395_tumor.L008 | -41 | Cycle | Base Insertion | 26623 | 1.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -41 | Cycle | Base Deletion | 26623 | 1.87 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -42 | Cycle | Base Substitution | 26514 | 33.89 | 30.00 | 30.62 | -0.62 | Before |
| REGRESSION.HCC1395_tumor.L008 | -42 | Cycle | Base Insertion | 26514 | 0.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -42 | Cycle | Base Deletion | 26514 | 1.85 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -43 | Cycle | Base Substitution | 26577 | 41.53 | 29.00 | 30.22 | -1.22 | Before |
| REGRESSION.HCC1395_tumor.L008 | -43 | Cycle | Base Insertion | 26577 | 0.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -43 | Cycle | Base Deletion | 26577 | 1.74 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -44 | Cycle | Base Substitution | 26631 | 48.91 | 29.00 | 30.15 | -1.15 | Before |
| REGRESSION.HCC1395_tumor.L008 | -44 | Cycle | Base Insertion | 26627 | 0.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -44 | Cycle | Base Deletion | 26627 | 1.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -45 | Cycle | Base Substitution | 26533 | 35.65 | 30.00 | 30.34 | -0.34 | Before |
| REGRESSION.HCC1395_tumor.L008 | -45 | Cycle | Base Insertion | 26525 | 0.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -45 | Cycle | Base Deletion | 26525 | 1.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -46 | Cycle | Base Substitution | 26537 | 36.24 | 30.00 | 30.39 | -0.39 | Before |
| REGRESSION.HCC1395_tumor.L008 | -46 | Cycle | Base Insertion | 26527 | 0.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -46 | Cycle | Base Deletion | 26527 | 1.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -47 | Cycle | Base Substitution | 26434 | 34.23 | 30.00 | 30.57 | -0.57 | Before |
| REGRESSION.HCC1395_tumor.L008 | -47 | Cycle | Base Insertion | 26424 | 1.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -47 | Cycle | Base Deletion | 26424 | 1.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -48 | Cycle | Base Substitution | 26532 | 40.76 | 29.00 | 30.44 | -1.44 | Before |
| REGRESSION.HCC1395_tumor.L008 | -48 | Cycle | Base Insertion | 26524 | 0.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -48 | Cycle | Base Deletion | 26524 | 1.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -49 | Cycle | Base Substitution | 26523 | 43.22 | 29.00 | 30.46 | -1.46 | Before |
| REGRESSION.HCC1395_tumor.L008 | -49 | Cycle | Base Insertion | 26515 | 0.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -49 | Cycle | Base Deletion | 26515 | 1.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -5 | Cycle | Base Substitution | 26952 | 46.48 | 29.00 | 30.40 | -1.40 | Before |
| REGRESSION.HCC1395_tumor.L008 | -5 | Cycle | Base Insertion | 26952 | 0.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -5 | Cycle | Base Deletion | 26952 | 0.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -50 | Cycle | Base Substitution | 26554 | 38.45 | 29.00 | 30.54 | -1.54 | Before |
| REGRESSION.HCC1395_tumor.L008 | -50 | Cycle | Base Insertion | 26542 | 1.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -50 | Cycle | Base Deletion | 26542 | 1.60 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -51 | Cycle | Base Substitution | 26441 | 32.18 | 30.00 | 30.46 | -0.46 | Before |
| REGRESSION.HCC1395_tumor.L008 | -51 | Cycle | Base Insertion | 26425 | 0.09 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -51 | Cycle | Base Deletion | 26425 | 1.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -52 | Cycle | Base Substitution | 26535 | 39.48 | 29.00 | 30.64 | -1.64 | Before |
| REGRESSION.HCC1395_tumor.L008 | -52 | Cycle | Base Insertion | 26510 | 0.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -52 | Cycle | Base Deletion | 26510 | 1.66 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -53 | Cycle | Base Substitution | 26499 | 48.30 | 29.00 | 30.65 | -1.65 | Before |
| REGRESSION.HCC1395_tumor.L008 | -53 | Cycle | Base Insertion | 26474 | 0.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -53 | Cycle | Base Deletion | 26474 | 1.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -54 | Cycle | Base Substitution | 26443 | 36.61 | 30.00 | 30.59 | -0.59 | Before |
| REGRESSION.HCC1395_tumor.L008 | -54 | Cycle | Base Insertion | 26412 | 0.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -54 | Cycle | Base Deletion | 26412 | 1.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -55 | Cycle | Base Substitution | 26366 | 52.15 | 29.00 | 30.29 | -1.29 | Before |
| REGRESSION.HCC1395_tumor.L008 | -55 | Cycle | Base Insertion | 26336 | 0.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -55 | Cycle | Base Deletion | 26336 | 1.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -56 | Cycle | Base Substitution | 26454 | 42.83 | 29.00 | 30.35 | -1.35 | Before |
| REGRESSION.HCC1395_tumor.L008 | -56 | Cycle | Base Insertion | 26421 | 0.12 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -56 | Cycle | Base Deletion | 26421 | 0.89 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -57 | Cycle | Base Substitution | 26280 | 32.76 | 30.00 | 30.68 | -0.68 | Before |
| REGRESSION.HCC1395_tumor.L008 | -57 | Cycle | Base Insertion | 26243 | 1.09 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -57 | Cycle | Base Deletion | 26243 | 1.04 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -58 | Cycle | Base Substitution | 26365 | 43.84 | 29.00 | 30.90 | -1.90 | Before |
| REGRESSION.HCC1395_tumor.L008 | -58 | Cycle | Base Insertion | 26322 | 0.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -58 | Cycle | Base Deletion | 26322 | 1.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -59 | Cycle | Base Substitution | 26430 | 42.16 | 29.00 | 30.55 | -1.55 | Before |
| REGRESSION.HCC1395_tumor.L008 | -59 | Cycle | Base Insertion | 26391 | 0.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -59 | Cycle | Base Deletion | 26391 | 1.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -6 | Cycle | Base Substitution | 26964 | 58.11 | 29.00 | 30.96 | -1.96 | Before |
| REGRESSION.HCC1395_tumor.L008 | -6 | Cycle | Base Insertion | 26964 | 0.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -6 | Cycle | Base Deletion | 26964 | 0.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -60 | Cycle | Base Substitution | 26438 | 49.50 | 29.00 | 30.88 | -1.88 | Before |
| REGRESSION.HCC1395_tumor.L008 | -60 | Cycle | Base Insertion | 26393 | 0.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -60 | Cycle | Base Deletion | 26393 | 1.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -61 | Cycle | Base Substitution | 26381 | 37.62 | 29.00 | 30.60 | -1.60 | Before |
| REGRESSION.HCC1395_tumor.L008 | -61 | Cycle | Base Insertion | 26330 | 0.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -61 | Cycle | Base Deletion | 26330 | 2.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -62 | Cycle | Base Substitution | 26467 | 42.16 | 29.00 | 30.87 | -1.87 | Before |
| REGRESSION.HCC1395_tumor.L008 | -62 | Cycle | Base Insertion | 26413 | 0.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -62 | Cycle | Base Deletion | 26413 | 2.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -63 | Cycle | Base Substitution | 26337 | 55.99 | 29.00 | 30.79 | -1.79 | Before |
| REGRESSION.HCC1395_tumor.L008 | -63 | Cycle | Base Insertion | 26266 | 0.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -63 | Cycle | Base Deletion | 26266 | 2.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -64 | Cycle | Base Substitution | 26254 | 39.22 | 29.00 | 30.81 | -1.81 | Before |
| REGRESSION.HCC1395_tumor.L008 | -64 | Cycle | Base Insertion | 26183 | 0.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -64 | Cycle | Base Deletion | 26183 | 1.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -65 | Cycle | Base Substitution | 26220 | 41.86 | 29.00 | 30.51 | -1.51 | Before |
| REGRESSION.HCC1395_tumor.L008 | -65 | Cycle | Base Insertion | 26138 | 0.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -65 | Cycle | Base Deletion | 26138 | 1.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -66 | Cycle | Base Substitution | 26210 | 28.63 | 30.00 | 30.51 | -0.51 | Before |
| REGRESSION.HCC1395_tumor.L008 | -66 | Cycle | Base Insertion | 26121 | 0.52 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -66 | Cycle | Base Deletion | 26121 | 1.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -67 | Cycle | Base Substitution | 26215 | 32.36 | 30.00 | 30.78 | -0.78 | Before |
| REGRESSION.HCC1395_tumor.L008 | -67 | Cycle | Base Insertion | 26126 | 0.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -67 | Cycle | Base Deletion | 26126 | 1.62 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -68 | Cycle | Base Substitution | 26276 | 44.96 | 29.00 | 30.63 | -1.63 | Before |
| REGRESSION.HCC1395_tumor.L008 | -68 | Cycle | Base Insertion | 26183 | 0.76 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -68 | Cycle | Base Deletion | 26183 | 1.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -69 | Cycle | Base Substitution | 26238 | 38.64 | 29.00 | 30.52 | -1.52 | Before |
| REGRESSION.HCC1395_tumor.L008 | -69 | Cycle | Base Insertion | 26153 | 1.12 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -69 | Cycle | Base Deletion | 26153 | 2.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -7 | Cycle | Base Substitution | 26879 | 41.31 | 29.00 | 30.39 | -1.39 | Before |
| REGRESSION.HCC1395_tumor.L008 | -7 | Cycle | Base Insertion | 26879 | 0.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -7 | Cycle | Base Deletion | 26879 | 0.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -70 | Cycle | Base Substitution | 26234 | 36.63 | 30.00 | 30.64 | -0.64 | Before |
| REGRESSION.HCC1395_tumor.L008 | -70 | Cycle | Base Insertion | 26150 | 1.02 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -70 | Cycle | Base Deletion | 26150 | 2.09 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -71 | Cycle | Base Substitution | 25999 | 35.90 | 30.00 | 30.38 | -0.38 | Before |
| REGRESSION.HCC1395_tumor.L008 | -71 | Cycle | Base Insertion | 25904 | 0.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -71 | Cycle | Base Deletion | 25904 | 1.76 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -72 | Cycle | Base Substitution | 25987 | 40.83 | 29.00 | 30.64 | -1.64 | Before |
| REGRESSION.HCC1395_tumor.L008 | -72 | Cycle | Base Insertion | 25886 | 0.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -72 | Cycle | Base Deletion | 25886 | 2.89 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -73 | Cycle | Base Substitution | 26154 | 41.69 | 29.00 | 30.67 | -1.67 | Before |
| REGRESSION.HCC1395_tumor.L008 | -73 | Cycle | Base Insertion | 26034 | 0.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -73 | Cycle | Base Deletion | 26034 | 1.80 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -74 | Cycle | Base Substitution | 26046 | 31.83 | 30.00 | 30.60 | -0.60 | Before |
| REGRESSION.HCC1395_tumor.L008 | -74 | Cycle | Base Insertion | 25928 | 0.21 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -74 | Cycle | Base Deletion | 25928 | 1.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -75 | Cycle | Base Substitution | 25927 | 39.85 | 29.00 | 30.69 | -1.69 | Before |
| REGRESSION.HCC1395_tumor.L008 | -75 | Cycle | Base Insertion | 25799 | 0.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -75 | Cycle | Base Deletion | 25799 | 1.99 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -76 | Cycle | Base Substitution | 25923 | 34.93 | 30.00 | 30.44 | -0.44 | Before |
| REGRESSION.HCC1395_tumor.L008 | -76 | Cycle | Base Insertion | 25777 | 0.09 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -76 | Cycle | Base Deletion | 25777 | 1.69 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -77 | Cycle | Base Substitution | 25842 | 39.44 | 29.00 | 30.37 | -1.37 | Before |
| REGRESSION.HCC1395_tumor.L008 | -77 | Cycle | Base Insertion | 25703 | 0.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -77 | Cycle | Base Deletion | 25703 | 1.72 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -78 | Cycle | Base Substitution | 25896 | 44.75 | 29.00 | 30.56 | -1.56 | Before |
| REGRESSION.HCC1395_tumor.L008 | -78 | Cycle | Base Insertion | 25754 | 0.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -78 | Cycle | Base Deletion | 25754 | 1.62 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -79 | Cycle | Base Substitution | 25814 | 46.23 | 29.00 | 30.38 | -1.38 | Before |
| REGRESSION.HCC1395_tumor.L008 | -79 | Cycle | Base Insertion | 25658 | 0.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -79 | Cycle | Base Deletion | 25658 | 1.66 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -8 | Cycle | Base Substitution | 26920 | 44.93 | 30.00 | 31.20 | -1.20 | Before |
| REGRESSION.HCC1395_tumor.L008 | -8 | Cycle | Base Insertion | 26920 | 0.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -8 | Cycle | Base Deletion | 26920 | 1.07 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -80 | Cycle | Base Substitution | 25769 | 43.24 | 30.00 | 31.02 | -1.02 | Before |
| REGRESSION.HCC1395_tumor.L008 | -80 | Cycle | Base Insertion | 25609 | 0.09 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -80 | Cycle | Base Deletion | 25609 | 1.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -81 | Cycle | Base Substitution | 25804 | 39.91 | 29.00 | 30.45 | -1.45 | Before |
| REGRESSION.HCC1395_tumor.L008 | -81 | Cycle | Base Insertion | 25635 | 0.09 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -81 | Cycle | Base Deletion | 25635 | 1.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -82 | Cycle | Base Substitution | 25714 | 44.99 | 29.00 | 30.46 | -1.46 | Before |
| REGRESSION.HCC1395_tumor.L008 | -82 | Cycle | Base Insertion | 25550 | 0.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -82 | Cycle | Base Deletion | 25550 | 1.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -83 | Cycle | Base Substitution | 25713 | 49.81 | 29.00 | 30.52 | -1.52 | Before |
| REGRESSION.HCC1395_tumor.L008 | -83 | Cycle | Base Insertion | 25540 | 0.12 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -83 | Cycle | Base Deletion | 25540 | 1.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -84 | Cycle | Base Substitution | 25593 | 40.86 | 29.00 | 30.44 | -1.44 | Before |
| REGRESSION.HCC1395_tumor.L008 | -84 | Cycle | Base Insertion | 25417 | 0.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -84 | Cycle | Base Deletion | 25417 | 1.92 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -85 | Cycle | Base Substitution | 25548 | 46.73 | 29.00 | 30.32 | -1.32 | Before |
| REGRESSION.HCC1395_tumor.L008 | -85 | Cycle | Base Insertion | 25393 | 0.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -85 | Cycle | Base Deletion | 25393 | 1.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -86 | Cycle | Base Substitution | 25585 | 39.00 | 29.00 | 30.20 | -1.20 | Before |
| REGRESSION.HCC1395_tumor.L008 | -86 | Cycle | Base Insertion | 25407 | 0.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -86 | Cycle | Base Deletion | 25407 | 1.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -87 | Cycle | Base Substitution | 25486 | 50.82 | 29.00 | 30.14 | -1.14 | Before |
| REGRESSION.HCC1395_tumor.L008 | -87 | Cycle | Base Insertion | 25319 | 0.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -87 | Cycle | Base Deletion | 25319 | 1.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -88 | Cycle | Base Substitution | 25506 | 45.47 | 29.00 | 30.15 | -1.15 | Before |
| REGRESSION.HCC1395_tumor.L008 | -88 | Cycle | Base Insertion | 25333 | 1.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -88 | Cycle | Base Deletion | 25333 | 1.52 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -89 | Cycle | Base Substitution | 25442 | 49.53 | 29.00 | 30.20 | -1.20 | Before |
| REGRESSION.HCC1395_tumor.L008 | -89 | Cycle | Base Insertion | 25262 | 0.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -89 | Cycle | Base Deletion | 25262 | 1.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -9 | Cycle | Base Substitution | 26978 | 50.49 | 30.00 | 31.09 | -1.09 | Before |
| REGRESSION.HCC1395_tumor.L008 | -9 | Cycle | Base Insertion | 26978 | 0.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -9 | Cycle | Base Deletion | 26978 | 1.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -90 | Cycle | Base Substitution | 25461 | 39.19 | 29.00 | 30.49 | -1.49 | Before |
| REGRESSION.HCC1395_tumor.L008 | -90 | Cycle | Base Insertion | 25279 | 0.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -90 | Cycle | Base Deletion | 25279 | 1.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -91 | Cycle | Base Substitution | 25459 | 46.42 | 29.00 | 30.13 | -1.13 | Before |
| REGRESSION.HCC1395_tumor.L008 | -91 | Cycle | Base Insertion | 25271 | 0.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -91 | Cycle | Base Deletion | 25271 | 0.96 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -92 | Cycle | Base Substitution | 25310 | 50.17 | 29.00 | 30.19 | -1.19 | Before |
| REGRESSION.HCC1395_tumor.L008 | -92 | Cycle | Base Insertion | 25110 | 0.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -92 | Cycle | Base Deletion | 25110 | 0.80 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -93 | Cycle | Base Substitution | 25236 | 55.09 | 29.00 | 30.12 | -1.12 | Before |
| REGRESSION.HCC1395_tumor.L008 | -93 | Cycle | Base Insertion | 25009 | 0.09 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -93 | Cycle | Base Deletion | 25009 | 0.93 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -94 | Cycle | Base Substitution | 25111 | 34.68 | 30.00 | 30.47 | -0.47 | Before |
| REGRESSION.HCC1395_tumor.L008 | -94 | Cycle | Base Insertion | 24883 | 0.07 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -94 | Cycle | Base Deletion | 24883 | 0.84 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -95 | Cycle | Base Substitution | 25218 | 38.08 | 29.00 | 29.98 | -0.98 | Before |
| REGRESSION.HCC1395_tumor.L008 | -95 | Cycle | Base Insertion | 24975 | 0.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -95 | Cycle | Base Deletion | 24975 | 1.02 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -96 | Cycle | Base Substitution | 25114 | 55.88 | 29.00 | 30.34 | -1.34 | Before |
| REGRESSION.HCC1395_tumor.L008 | -96 | Cycle | Base Insertion | 24871 | 0.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -96 | Cycle | Base Deletion | 24871 | 1.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -97 | Cycle | Base Substitution | 25091 | 47.89 | 29.00 | 30.30 | -1.30 | Before |
| REGRESSION.HCC1395_tumor.L008 | -97 | Cycle | Base Insertion | 24849 | 0.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -97 | Cycle | Base Deletion | 24849 | 0.91 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -98 | Cycle | Base Substitution | 24889 | 49.90 | 29.00 | 30.09 | -1.09 | Before |
| REGRESSION.HCC1395_tumor.L008 | -98 | Cycle | Base Insertion | 24661 | 0.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -98 | Cycle | Base Deletion | 24661 | 1.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -99 | Cycle | Base Substitution | 24952 | 45.54 | 29.00 | 30.41 | -1.41 | Before |
| REGRESSION.HCC1395_tumor.L008 | -99 | Cycle | Base Insertion | 24735 | 0.82 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | -99 | Cycle | Base Deletion | 24735 | 1.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 1 | Cycle | Base Substitution | 26600 | 54.76 | 28.00 | 28.47 | -0.47 | Before |
| REGRESSION.HCC1395_tumor.L008 | 10 | Cycle | Base Substitution | 26845 | 31.80 | 30.00 | 31.08 | -1.08 | Before |
| REGRESSION.HCC1395_tumor.L008 | 10 | Cycle | Base Insertion | 26845 | 0.86 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 10 | Cycle | Base Deletion | 26845 | 1.75 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 100 | Cycle | Base Substitution | 24723 | 52.25 | 29.00 | 30.13 | -1.13 | Before |
| REGRESSION.HCC1395_tumor.L008 | 100 | Cycle | Base Insertion | 24507 | 0.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 100 | Cycle | Base Deletion | 24507 | 1.96 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 101 | Cycle | Base Substitution | 24737 | 26.19 | 30.00 | 30.49 | -0.49 | Before |
| REGRESSION.HCC1395_tumor.L008 | 101 | Cycle | Base Insertion | 24533 | 0.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 101 | Cycle | Base Deletion | 24533 | 1.77 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 102 | Cycle | Base Substitution | 24685 | 29.19 | 30.00 | 30.66 | -0.66 | Before |
| REGRESSION.HCC1395_tumor.L008 | 102 | Cycle | Base Insertion | 24464 | 0.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 102 | Cycle | Base Deletion | 24464 | 1.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 103 | Cycle | Base Substitution | 24607 | 41.21 | 29.00 | 30.37 | -1.37 | Before |
| REGRESSION.HCC1395_tumor.L008 | 103 | Cycle | Base Insertion | 24359 | 0.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 103 | Cycle | Base Deletion | 24359 | 1.73 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 104 | Cycle | Base Substitution | 24586 | 33.79 | 30.00 | 30.37 | -0.37 | Before |
| REGRESSION.HCC1395_tumor.L008 | 104 | Cycle | Base Insertion | 24337 | 0.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 104 | Cycle | Base Deletion | 24337 | 1.97 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 105 | Cycle | Base Substitution | 24523 | 38.33 | 29.00 | 30.54 | -1.54 | Before |
| REGRESSION.HCC1395_tumor.L008 | 105 | Cycle | Base Insertion | 24260 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 105 | Cycle | Base Deletion | 24260 | 1.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 106 | Cycle | Base Substitution | 24537 | 40.93 | 29.00 | 30.78 | -1.78 | Before |
| REGRESSION.HCC1395_tumor.L008 | 106 | Cycle | Base Insertion | 24290 | 0.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 106 | Cycle | Base Deletion | 24290 | 1.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 107 | Cycle | Base Substitution | 24365 | 41.41 | 29.00 | 30.52 | -1.52 | Before |
| REGRESSION.HCC1395_tumor.L008 | 107 | Cycle | Base Insertion | 24120 | 0.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 107 | Cycle | Base Deletion | 24120 | 0.98 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 108 | Cycle | Base Substitution | 24270 | 51.51 | 29.00 | 30.56 | -1.56 | Before |
| REGRESSION.HCC1395_tumor.L008 | 108 | Cycle | Base Insertion | 24029 | 0.73 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 108 | Cycle | Base Deletion | 24029 | 1.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 109 | Cycle | Base Substitution | 24287 | 31.13 | 30.00 | 30.81 | -0.81 | Before |
| REGRESSION.HCC1395_tumor.L008 | 109 | Cycle | Base Insertion | 24032 | 0.73 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 109 | Cycle | Base Deletion | 24032 | 1.69 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 11 | Cycle | Base Substitution | 26874 | 32.81 | 30.00 | 30.87 | -0.87 | Before |
| REGRESSION.HCC1395_tumor.L008 | 11 | Cycle | Base Insertion | 26874 | 0.75 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 11 | Cycle | Base Deletion | 26874 | 1.89 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 110 | Cycle | Base Substitution | 24302 | 47.60 | 29.00 | 30.52 | -1.52 | Before |
| REGRESSION.HCC1395_tumor.L008 | 110 | Cycle | Base Insertion | 24019 | 0.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 110 | Cycle | Base Deletion | 24019 | 1.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 111 | Cycle | Base Substitution | 24308 | 40.94 | 29.00 | 30.12 | -1.12 | Before |
| REGRESSION.HCC1395_tumor.L008 | 111 | Cycle | Base Insertion | 24001 | 1.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 111 | Cycle | Base Deletion | 24001 | 1.78 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 112 | Cycle | Base Substitution | 24143 | 48.26 | 29.00 | 30.39 | -1.39 | Before |
| REGRESSION.HCC1395_tumor.L008 | 112 | Cycle | Base Insertion | 23831 | 0.11 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 112 | Cycle | Base Deletion | 23831 | 1.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 113 | Cycle | Base Substitution | 24236 | 43.68 | 29.00 | 30.18 | -1.18 | Before |
| REGRESSION.HCC1395_tumor.L008 | 113 | Cycle | Base Insertion | 23923 | 0.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 113 | Cycle | Base Deletion | 23923 | 1.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 114 | Cycle | Base Substitution | 24052 | 32.97 | 30.00 | 30.30 | -0.30 | Before |
| REGRESSION.HCC1395_tumor.L008 | 114 | Cycle | Base Insertion | 23740 | 0.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 114 | Cycle | Base Deletion | 23740 | 1.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 115 | Cycle | Base Substitution | 23924 | 41.11 | 29.00 | 30.32 | -1.32 | Before |
| REGRESSION.HCC1395_tumor.L008 | 115 | Cycle | Base Insertion | 23598 | 0.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 115 | Cycle | Base Deletion | 23598 | 1.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 116 | Cycle | Base Substitution | 23875 | 40.08 | 29.00 | 30.38 | -1.38 | Before |
| REGRESSION.HCC1395_tumor.L008 | 116 | Cycle | Base Insertion | 23540 | 0.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 116 | Cycle | Base Deletion | 23540 | 0.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 117 | Cycle | Base Substitution | 23740 | 47.32 | 29.00 | 30.15 | -1.15 | Before |
| REGRESSION.HCC1395_tumor.L008 | 117 | Cycle | Base Insertion | 23409 | 0.75 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 117 | Cycle | Base Deletion | 23409 | 0.66 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 118 | Cycle | Base Substitution | 23602 | 35.72 | 29.00 | 30.19 | -1.19 | Before |
| REGRESSION.HCC1395_tumor.L008 | 118 | Cycle | Base Insertion | 23306 | 0.84 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 118 | Cycle | Base Deletion | 23306 | 0.69 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 119 | Cycle | Base Substitution | 23721 | 48.50 | 29.00 | 30.21 | -1.21 | Before |
| REGRESSION.HCC1395_tumor.L008 | 119 | Cycle | Base Insertion | 23419 | 0.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 119 | Cycle | Base Deletion | 23419 | 0.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 12 | Cycle | Base Substitution | 26865 | 35.82 | 30.00 | 31.46 | -1.46 | Before |
| REGRESSION.HCC1395_tumor.L008 | 12 | Cycle | Base Insertion | 26865 | 0.86 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 12 | Cycle | Base Deletion | 26865 | 1.95 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 120 | Cycle | Base Substitution | 23594 | 42.26 | 29.00 | 30.23 | -1.23 | Before |
| REGRESSION.HCC1395_tumor.L008 | 120 | Cycle | Base Insertion | 23305 | 0.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 120 | Cycle | Base Deletion | 23305 | 0.74 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 121 | Cycle | Base Substitution | 23648 | 55.48 | 29.00 | 30.15 | -1.15 | Before |
| REGRESSION.HCC1395_tumor.L008 | 121 | Cycle | Base Insertion | 23331 | 0.23 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 121 | Cycle | Base Deletion | 23331 | 0.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 122 | Cycle | Base Substitution | 23334 | 44.90 | 28.00 | 29.80 | -1.80 | Before |
| REGRESSION.HCC1395_tumor.L008 | 122 | Cycle | Base Insertion | 23017 | 0.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 122 | Cycle | Base Deletion | 23017 | 0.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 123 | Cycle | Base Substitution | 23322 | 49.78 | 29.00 | 30.04 | -1.04 | Before |
| REGRESSION.HCC1395_tumor.L008 | 123 | Cycle | Base Insertion | 23014 | 0.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 123 | Cycle | Base Deletion | 23014 | 0.74 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 124 | Cycle | Base Substitution | 23310 | 55.41 | 28.00 | 29.94 | -1.94 | Before |
| REGRESSION.HCC1395_tumor.L008 | 124 | Cycle | Base Insertion | 23008 | 0.25 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 124 | Cycle | Base Deletion | 23008 | 0.90 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 125 | Cycle | Base Substitution | 23309 | 37.20 | 29.00 | 29.93 | -0.93 | Before |
| REGRESSION.HCC1395_tumor.L008 | 125 | Cycle | Base Insertion | 23007 | 0.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 125 | Cycle | Base Deletion | 23007 | 0.95 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 126 | Cycle | Base Substitution | 23246 | 49.57 | 28.00 | 29.91 | -1.91 | Before |
| REGRESSION.HCC1395_tumor.L008 | 126 | Cycle | Base Insertion | 22951 | 0.40 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 126 | Cycle | Base Deletion | 22951 | 1.07 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 127 | Cycle | Base Substitution | 23125 | 37.81 | 29.00 | 30.28 | -1.28 | Before |
| REGRESSION.HCC1395_tumor.L008 | 127 | Cycle | Base Insertion | 22839 | 0.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 127 | Cycle | Base Deletion | 22839 | 0.98 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 128 | Cycle | Base Substitution | 23016 | 49.44 | 28.00 | 29.72 | -1.72 | Before |
| REGRESSION.HCC1395_tumor.L008 | 128 | Cycle | Base Insertion | 22722 | 0.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 128 | Cycle | Base Deletion | 22722 | 1.85 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 129 | Cycle | Base Substitution | 22988 | 38.86 | 29.00 | 30.02 | -1.02 | Before |
| REGRESSION.HCC1395_tumor.L008 | 129 | Cycle | Base Insertion | 22688 | 0.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 129 | Cycle | Base Deletion | 22688 | 1.85 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 13 | Cycle | Base Substitution | 26777 | 36.53 | 30.00 | 30.98 | -0.98 | Before |
| REGRESSION.HCC1395_tumor.L008 | 13 | Cycle | Base Insertion | 26777 | 1.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 13 | Cycle | Base Deletion | 26777 | 2.01 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 130 | Cycle | Base Substitution | 22910 | 40.36 | 29.00 | 30.16 | -1.16 | Before |
| REGRESSION.HCC1395_tumor.L008 | 130 | Cycle | Base Insertion | 22599 | 0.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 130 | Cycle | Base Deletion | 22599 | 2.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 131 | Cycle | Base Substitution | 22945 | 52.00 | 29.00 | 30.05 | -1.05 | Before |
| REGRESSION.HCC1395_tumor.L008 | 131 | Cycle | Base Insertion | 22638 | 0.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 131 | Cycle | Base Deletion | 22638 | 1.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 132 | Cycle | Base Substitution | 22847 | 50.66 | 28.00 | 29.67 | -1.67 | Before |
| REGRESSION.HCC1395_tumor.L008 | 132 | Cycle | Base Insertion | 22525 | 0.34 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 132 | Cycle | Base Deletion | 22525 | 1.66 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 133 | Cycle | Base Substitution | 22643 | 54.43 | 29.00 | 30.02 | -1.02 | Before |
| REGRESSION.HCC1395_tumor.L008 | 133 | Cycle | Base Insertion | 22340 | 0.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 133 | Cycle | Base Deletion | 22340 | 1.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 134 | Cycle | Base Substitution | 22540 | 41.92 | 28.00 | 29.96 | -1.96 | Before |
| REGRESSION.HCC1395_tumor.L008 | 134 | Cycle | Base Insertion | 22220 | 0.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 134 | Cycle | Base Deletion | 22220 | 0.70 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 135 | Cycle | Base Substitution | 22487 | 45.74 | 28.00 | 29.61 | -1.61 | Before |
| REGRESSION.HCC1395_tumor.L008 | 135 | Cycle | Base Insertion | 22138 | 1.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 135 | Cycle | Base Deletion | 22138 | 0.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 136 | Cycle | Base Substitution | 22398 | 46.96 | 29.00 | 30.24 | -1.24 | Before |
| REGRESSION.HCC1395_tumor.L008 | 136 | Cycle | Base Insertion | 22075 | 1.06 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 136 | Cycle | Base Deletion | 22075 | 0.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 137 | Cycle | Base Substitution | 22403 | 43.49 | 28.00 | 29.73 | -1.73 | Before |
| REGRESSION.HCC1395_tumor.L008 | 137 | Cycle | Base Insertion | 22074 | 0.31 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 137 | Cycle | Base Deletion | 22074 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 138 | Cycle | Base Substitution | 22294 | 40.87 | 28.00 | 29.98 | -1.98 | Before |
| REGRESSION.HCC1395_tumor.L008 | 138 | Cycle | Base Insertion | 21986 | 0.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 138 | Cycle | Base Deletion | 21986 | 0.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 139 | Cycle | Base Substitution | 22251 | 47.75 | 28.00 | 29.92 | -1.92 | Before |
| REGRESSION.HCC1395_tumor.L008 | 139 | Cycle | Base Insertion | 21937 | 0.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 139 | Cycle | Base Deletion | 21937 | 0.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 14 | Cycle | Base Substitution | 26727 | 22.60 | 31.00 | 31.25 | -0.25 | Before |
| REGRESSION.HCC1395_tumor.L008 | 14 | Cycle | Base Insertion | 26727 | 1.12 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 14 | Cycle | Base Deletion | 26727 | 1.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 140 | Cycle | Base Substitution | 22135 | 37.58 | 29.00 | 29.66 | -0.66 | Before |
| REGRESSION.HCC1395_tumor.L008 | 140 | Cycle | Base Insertion | 21807 | 0.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 140 | Cycle | Base Deletion | 21807 | 0.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 141 | Cycle | Base Substitution | 22172 | 40.15 | 28.00 | 29.95 | -1.95 | Before |
| REGRESSION.HCC1395_tumor.L008 | 141 | Cycle | Base Insertion | 21835 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 141 | Cycle | Base Deletion | 21835 | 0.89 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 142 | Cycle | Base Substitution | 22101 | 47.77 | 28.00 | 29.77 | -1.77 | Before |
| REGRESSION.HCC1395_tumor.L008 | 142 | Cycle | Base Insertion | 21750 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 142 | Cycle | Base Deletion | 21750 | 0.60 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 143 | Cycle | Base Substitution | 21976 | 46.52 | 28.00 | 29.32 | -1.32 | Before |
| REGRESSION.HCC1395_tumor.L008 | 143 | Cycle | Base Insertion | 21625 | 0.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 143 | Cycle | Base Deletion | 21625 | 0.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 144 | Cycle | Base Substitution | 21883 | 45.68 | 29.00 | 30.06 | -1.06 | Before |
| REGRESSION.HCC1395_tumor.L008 | 144 | Cycle | Base Insertion | 21515 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 144 | Cycle | Base Deletion | 21515 | 0.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 145 | Cycle | Base Substitution | 21843 | 41.81 | 28.00 | 29.78 | -1.78 | Before |
| REGRESSION.HCC1395_tumor.L008 | 145 | Cycle | Base Insertion | 21456 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 145 | Cycle | Base Deletion | 21456 | 0.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 146 | Cycle | Base Substitution | 21837 | 38.33 | 29.00 | 29.95 | -0.95 | Before |
| REGRESSION.HCC1395_tumor.L008 | 146 | Cycle | Base Insertion | 21468 | 0.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 146 | Cycle | Base Deletion | 21468 | 0.20 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 147 | Cycle | Base Substitution | 21602 | 53.33 | 28.00 | 29.81 | -1.81 | Before |
| REGRESSION.HCC1395_tumor.L008 | 148 | Cycle | Base Substitution | 21477 | 53.30 | 28.00 | 29.76 | -1.76 | Before |
| REGRESSION.HCC1395_tumor.L008 | 149 | Cycle | Base Substitution | 21424 | 47.65 | 28.00 | 29.59 | -1.59 | Before |
| REGRESSION.HCC1395_tumor.L008 | 15 | Cycle | Base Substitution | 26782 | 34.28 | 30.00 | 31.49 | -1.49 | Before |
| REGRESSION.HCC1395_tumor.L008 | 15 | Cycle | Base Insertion | 26782 | 0.84 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 15 | Cycle | Base Deletion | 26782 | 1.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 150 | Cycle | Base Substitution | 21366 | 42.19 | 28.00 | 29.93 | -1.93 | Before |
| REGRESSION.HCC1395_tumor.L008 | 16 | Cycle | Base Substitution | 26704 | 24.67 | 32.00 | 33.01 | -1.01 | Before |
| REGRESSION.HCC1395_tumor.L008 | 16 | Cycle | Base Insertion | 26704 | 0.73 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 16 | Cycle | Base Deletion | 26704 | 1.67 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 17 | Cycle | Base Substitution | 26689 | 27.32 | 31.00 | 32.73 | -1.73 | Before |
| REGRESSION.HCC1395_tumor.L008 | 17 | Cycle | Base Insertion | 26689 | 1.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 17 | Cycle | Base Deletion | 26689 | 1.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 18 | Cycle | Base Substitution | 26741 | 18.35 | 32.00 | 32.52 | -0.52 | Before |
| REGRESSION.HCC1395_tumor.L008 | 18 | Cycle | Base Insertion | 26741 | 0.99 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 18 | Cycle | Base Deletion | 26741 | 2.02 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 19 | Cycle | Base Substitution | 26747 | 23.04 | 32.00 | 32.92 | -0.92 | Before |
| REGRESSION.HCC1395_tumor.L008 | 19 | Cycle | Base Insertion | 26747 | 1.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 19 | Cycle | Base Deletion | 26747 | 1.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 2 | Cycle | Base Substitution | 26963 | 45.12 | 29.00 | 30.32 | -1.32 | Before |
| REGRESSION.HCC1395_tumor.L008 | 20 | Cycle | Base Substitution | 26692 | 24.57 | 32.00 | 32.85 | -0.85 | Before |
| REGRESSION.HCC1395_tumor.L008 | 20 | Cycle | Base Insertion | 26692 | 0.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 20 | Cycle | Base Deletion | 26692 | 1.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 21 | Cycle | Base Substitution | 26616 | 25.59 | 32.00 | 32.67 | -0.67 | Before |
| REGRESSION.HCC1395_tumor.L008 | 21 | Cycle | Base Insertion | 26616 | 1.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 21 | Cycle | Base Deletion | 26616 | 1.80 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 22 | Cycle | Base Substitution | 26806 | 16.61 | 33.00 | 33.00 | -0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 22 | Cycle | Base Insertion | 26806 | 0.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 22 | Cycle | Base Deletion | 26806 | 1.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 23 | Cycle | Base Substitution | 26621 | 21.25 | 32.00 | 32.73 | -0.73 | Before |
| REGRESSION.HCC1395_tumor.L008 | 23 | Cycle | Base Insertion | 26621 | 0.60 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 23 | Cycle | Base Deletion | 26621 | 1.67 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 24 | Cycle | Base Substitution | 26664 | 22.20 | 33.00 | 33.24 | -0.24 | Before |
| REGRESSION.HCC1395_tumor.L008 | 24 | Cycle | Base Insertion | 26664 | 0.65 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 24 | Cycle | Base Deletion | 26664 | 2.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 25 | Cycle | Base Substitution | 26671 | 24.66 | 32.00 | 32.57 | -0.57 | Before |
| REGRESSION.HCC1395_tumor.L008 | 25 | Cycle | Base Insertion | 26671 | 0.78 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 25 | Cycle | Base Deletion | 26671 | 1.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 26 | Cycle | Base Substitution | 26579 | 34.05 | 30.00 | 31.51 | -1.51 | Before |
| REGRESSION.HCC1395_tumor.L008 | 26 | Cycle | Base Insertion | 26579 | 0.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 26 | Cycle | Base Deletion | 26579 | 1.74 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 27 | Cycle | Base Substitution | 26682 | 30.75 | 31.00 | 31.17 | -0.17 | Before |
| REGRESSION.HCC1395_tumor.L008 | 27 | Cycle | Base Insertion | 26682 | 0.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 27 | Cycle | Base Deletion | 26682 | 1.98 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 28 | Cycle | Base Substitution | 26709 | 25.16 | 31.00 | 31.38 | -0.38 | Before |
| REGRESSION.HCC1395_tumor.L008 | 28 | Cycle | Base Insertion | 26709 | 0.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 28 | Cycle | Base Deletion | 26709 | 1.62 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 29 | Cycle | Base Substitution | 26655 | 26.20 | 31.00 | 31.37 | -0.37 | Before |
| REGRESSION.HCC1395_tumor.L008 | 29 | Cycle | Base Insertion | 26654 | 0.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 29 | Cycle | Base Deletion | 26654 | 1.73 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 3 | Cycle | Base Substitution | 26979 | 53.76 | 30.00 | 31.20 | -1.20 | Before |
| REGRESSION.HCC1395_tumor.L008 | 30 | Cycle | Base Substitution | 26659 | 32.18 | 30.00 | 31.56 | -1.56 | Before |
| REGRESSION.HCC1395_tumor.L008 | 30 | Cycle | Base Insertion | 26658 | 0.90 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 30 | Cycle | Base Deletion | 26658 | 2.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 31 | Cycle | Base Substitution | 26526 | 27.82 | 31.00 | 31.65 | -0.65 | Before |
| REGRESSION.HCC1395_tumor.L008 | 31 | Cycle | Base Insertion | 26524 | 0.71 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 31 | Cycle | Base Deletion | 26524 | 2.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 32 | Cycle | Base Substitution | 26616 | 35.41 | 30.00 | 31.35 | -1.35 | Before |
| REGRESSION.HCC1395_tumor.L008 | 32 | Cycle | Base Insertion | 26613 | 0.97 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 32 | Cycle | Base Deletion | 26613 | 2.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 33 | Cycle | Base Substitution | 26608 | 28.09 | 31.00 | 31.12 | -0.12 | Before |
| REGRESSION.HCC1395_tumor.L008 | 33 | Cycle | Base Insertion | 26607 | 0.66 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 33 | Cycle | Base Deletion | 26607 | 2.03 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 34 | Cycle | Base Substitution | 26565 | 32.32 | 30.00 | 31.10 | -1.10 | Before |
| REGRESSION.HCC1395_tumor.L008 | 34 | Cycle | Base Insertion | 26562 | 0.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 34 | Cycle | Base Deletion | 26562 | 1.66 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 35 | Cycle | Base Substitution | 26619 | 27.81 | 31.00 | 31.52 | -0.52 | Before |
| REGRESSION.HCC1395_tumor.L008 | 35 | Cycle | Base Insertion | 26617 | 0.77 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 35 | Cycle | Base Deletion | 26617 | 1.91 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 36 | Cycle | Base Substitution | 26537 | 33.66 | 30.00 | 31.37 | -1.37 | Before |
| REGRESSION.HCC1395_tumor.L008 | 36 | Cycle | Base Insertion | 26537 | 0.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 36 | Cycle | Base Deletion | 26537 | 1.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 37 | Cycle | Base Substitution | 26522 | 31.38 | 31.00 | 31.51 | -0.51 | Before |
| REGRESSION.HCC1395_tumor.L008 | 37 | Cycle | Base Insertion | 26522 | 0.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 37 | Cycle | Base Deletion | 26522 | 1.12 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 38 | Cycle | Base Substitution | 26528 | 32.01 | 30.00 | 31.66 | -1.66 | Before |
| REGRESSION.HCC1395_tumor.L008 | 38 | Cycle | Base Insertion | 26526 | 0.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 38 | Cycle | Base Deletion | 26526 | 0.90 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 39 | Cycle | Base Substitution | 26543 | 38.39 | 30.00 | 31.41 | -1.41 | Before |
| REGRESSION.HCC1395_tumor.L008 | 39 | Cycle | Base Insertion | 26542 | 0.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 39 | Cycle | Base Deletion | 26542 | 1.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 4 | Cycle | Base Substitution | 27038 | 61.90 | 29.00 | 31.13 | -2.13 | Before |
| REGRESSION.HCC1395_tumor.L008 | 40 | Cycle | Base Substitution | 26555 | 32.24 | 30.00 | 31.63 | -1.63 | Before |
| REGRESSION.HCC1395_tumor.L008 | 40 | Cycle | Base Insertion | 26554 | 0.52 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 40 | Cycle | Base Deletion | 26554 | 1.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 41 | Cycle | Base Substitution | 26571 | 30.75 | 31.00 | 31.54 | -0.54 | Before |
| REGRESSION.HCC1395_tumor.L008 | 41 | Cycle | Base Insertion | 26569 | 0.52 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 41 | Cycle | Base Deletion | 26569 | 1.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 42 | Cycle | Base Substitution | 26519 | 37.54 | 30.00 | 31.23 | -1.23 | Before |
| REGRESSION.HCC1395_tumor.L008 | 42 | Cycle | Base Insertion | 26519 | 0.52 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 42 | Cycle | Base Deletion | 26519 | 2.00 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 43 | Cycle | Base Substitution | 26546 | 22.35 | 31.00 | 31.59 | -0.59 | Before |
| REGRESSION.HCC1395_tumor.L008 | 43 | Cycle | Base Insertion | 26546 | 0.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 43 | Cycle | Base Deletion | 26546 | 1.84 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 44 | Cycle | Base Substitution | 26532 | 34.15 | 30.00 | 31.12 | -1.12 | Before |
| REGRESSION.HCC1395_tumor.L008 | 44 | Cycle | Base Insertion | 26529 | 0.45 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 44 | Cycle | Base Deletion | 26529 | 1.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 45 | Cycle | Base Substitution | 26445 | 33.38 | 30.00 | 31.69 | -1.69 | Before |
| REGRESSION.HCC1395_tumor.L008 | 45 | Cycle | Base Insertion | 26439 | 0.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 45 | Cycle | Base Deletion | 26439 | 1.33 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 46 | Cycle | Base Substitution | 26416 | 23.24 | 31.00 | 31.58 | -0.58 | Before |
| REGRESSION.HCC1395_tumor.L008 | 46 | Cycle | Base Insertion | 26406 | 0.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 46 | Cycle | Base Deletion | 26406 | 1.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 47 | Cycle | Base Substitution | 26416 | 31.04 | 31.00 | 31.51 | -0.51 | Before |
| REGRESSION.HCC1395_tumor.L008 | 47 | Cycle | Base Insertion | 26405 | 0.92 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 47 | Cycle | Base Deletion | 26405 | 1.10 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 48 | Cycle | Base Substitution | 26471 | 33.64 | 30.00 | 31.35 | -1.35 | Before |
| REGRESSION.HCC1395_tumor.L008 | 48 | Cycle | Base Insertion | 26465 | 0.93 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 48 | Cycle | Base Deletion | 26465 | 1.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 49 | Cycle | Base Substitution | 26466 | 39.67 | 29.00 | 30.97 | -1.97 | Before |
| REGRESSION.HCC1395_tumor.L008 | 49 | Cycle | Base Insertion | 26457 | 0.61 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 49 | Cycle | Base Deletion | 26457 | 1.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 5 | Cycle | Base Substitution | 26968 | 38.74 | 30.00 | 31.53 | -1.53 | Before |
| REGRESSION.HCC1395_tumor.L008 | 5 | Cycle | Base Insertion | 26968 | 0.37 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 5 | Cycle | Base Deletion | 26968 | 0.50 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 50 | Cycle | Base Substitution | 26440 | 29.13 | 31.00 | 31.58 | -0.58 | Before |
| REGRESSION.HCC1395_tumor.L008 | 50 | Cycle | Base Insertion | 26427 | 0.80 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 50 | Cycle | Base Deletion | 26427 | 1.01 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 51 | Cycle | Base Substitution | 26341 | 35.90 | 30.00 | 31.43 | -1.43 | Before |
| REGRESSION.HCC1395_tumor.L008 | 51 | Cycle | Base Insertion | 26322 | 0.73 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 51 | Cycle | Base Deletion | 26322 | 1.48 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 52 | Cycle | Base Substitution | 26393 | 30.39 | 31.00 | 31.72 | -0.72 | Before |
| REGRESSION.HCC1395_tumor.L008 | 52 | Cycle | Base Insertion | 26370 | 0.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 52 | Cycle | Base Deletion | 26370 | 1.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 53 | Cycle | Base Substitution | 26381 | 27.76 | 31.00 | 31.46 | -0.46 | Before |
| REGRESSION.HCC1395_tumor.L008 | 53 | Cycle | Base Insertion | 26361 | 0.81 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 53 | Cycle | Base Deletion | 26361 | 1.49 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 54 | Cycle | Base Substitution | 26334 | 38.26 | 29.00 | 30.80 | -1.80 | Before |
| REGRESSION.HCC1395_tumor.L008 | 54 | Cycle | Base Insertion | 26312 | 0.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 54 | Cycle | Base Deletion | 26312 | 1.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 55 | Cycle | Base Substitution | 26302 | 24.21 | 31.00 | 31.64 | -0.64 | Before |
| REGRESSION.HCC1395_tumor.L008 | 55 | Cycle | Base Insertion | 26272 | 0.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 55 | Cycle | Base Deletion | 26272 | 1.15 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 56 | Cycle | Base Substitution | 26472 | 26.84 | 31.00 | 31.49 | -0.49 | Before |
| REGRESSION.HCC1395_tumor.L008 | 56 | Cycle | Base Insertion | 26436 | 0.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 56 | Cycle | Base Deletion | 26436 | 1.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 57 | Cycle | Base Substitution | 26305 | 31.03 | 31.00 | 31.06 | -0.06 | Before |
| REGRESSION.HCC1395_tumor.L008 | 57 | Cycle | Base Insertion | 26270 | 0.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 57 | Cycle | Base Deletion | 26270 | 1.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 58 | Cycle | Base Substitution | 26367 | 31.07 | 31.00 | 31.40 | -0.40 | Before |
| REGRESSION.HCC1395_tumor.L008 | 58 | Cycle | Base Insertion | 26325 | 0.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 58 | Cycle | Base Deletion | 26325 | 1.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 59 | Cycle | Base Substitution | 26393 | 31.41 | 31.00 | 31.48 | -0.48 | Before |
| REGRESSION.HCC1395_tumor.L008 | 59 | Cycle | Base Insertion | 26357 | 0.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 59 | Cycle | Base Deletion | 26357 | 1.51 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 6 | Cycle | Base Substitution | 26905 | 35.16 | 30.00 | 31.30 | -1.30 | Before |
| REGRESSION.HCC1395_tumor.L008 | 6 | Cycle | Base Insertion | 26905 | 0.44 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 6 | Cycle | Base Deletion | 26905 | 0.54 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 60 | Cycle | Base Substitution | 26238 | 33.85 | 30.00 | 31.05 | -1.05 | Before |
| REGRESSION.HCC1395_tumor.L008 | 60 | Cycle | Base Insertion | 26198 | 0.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 60 | Cycle | Base Deletion | 26198 | 1.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 61 | Cycle | Base Substitution | 26288 | 34.15 | 30.00 | 31.38 | -1.38 | Before |
| REGRESSION.HCC1395_tumor.L008 | 61 | Cycle | Base Insertion | 26237 | 0.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 61 | Cycle | Base Deletion | 26237 | 1.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 62 | Cycle | Base Substitution | 26192 | 35.15 | 30.00 | 30.94 | -0.94 | Before |
| REGRESSION.HCC1395_tumor.L008 | 62 | Cycle | Base Insertion | 26137 | 0.61 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 62 | Cycle | Base Deletion | 26137 | 1.08 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 63 | Cycle | Base Substitution | 26175 | 38.69 | 30.00 | 31.29 | -1.29 | Before |
| REGRESSION.HCC1395_tumor.L008 | 63 | Cycle | Base Insertion | 26108 | 0.61 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 63 | Cycle | Base Deletion | 26108 | 1.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 64 | Cycle | Base Substitution | 26122 | 45.04 | 29.00 | 30.99 | -1.99 | Before |
| REGRESSION.HCC1395_tumor.L008 | 64 | Cycle | Base Insertion | 26044 | 0.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 64 | Cycle | Base Deletion | 26044 | 1.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 65 | Cycle | Base Substitution | 26172 | 33.68 | 30.00 | 31.33 | -1.33 | Before |
| REGRESSION.HCC1395_tumor.L008 | 65 | Cycle | Base Insertion | 26096 | 0.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 65 | Cycle | Base Deletion | 26096 | 1.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 66 | Cycle | Base Substitution | 26050 | 30.93 | 30.00 | 31.21 | -1.21 | Before |
| REGRESSION.HCC1395_tumor.L008 | 66 | Cycle | Base Insertion | 25964 | 0.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 66 | Cycle | Base Deletion | 25964 | 1.60 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 67 | Cycle | Base Substitution | 26079 | 36.40 | 30.00 | 31.08 | -1.08 | Before |
| REGRESSION.HCC1395_tumor.L008 | 67 | Cycle | Base Insertion | 25996 | 0.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 67 | Cycle | Base Deletion | 25996 | 1.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 68 | Cycle | Base Substitution | 26078 | 43.48 | 29.00 | 30.82 | -1.82 | Before |
| REGRESSION.HCC1395_tumor.L008 | 68 | Cycle | Base Insertion | 25992 | 0.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 68 | Cycle | Base Deletion | 25992 | 1.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 69 | Cycle | Base Substitution | 26132 | 31.83 | 30.00 | 31.18 | -1.18 | Before |
| REGRESSION.HCC1395_tumor.L008 | 69 | Cycle | Base Insertion | 26049 | 0.60 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 69 | Cycle | Base Deletion | 26049 | 1.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 7 | Cycle | Base Substitution | 26817 | 25.94 | 31.00 | 31.20 | -0.20 | Before |
| REGRESSION.HCC1395_tumor.L008 | 7 | Cycle | Base Insertion | 26817 | 0.46 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 7 | Cycle | Base Deletion | 26817 | 0.88 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 70 | Cycle | Base Substitution | 26051 | 29.66 | 31.00 | 31.25 | -0.25 | Before |
| REGRESSION.HCC1395_tumor.L008 | 70 | Cycle | Base Insertion | 25965 | 0.59 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 70 | Cycle | Base Deletion | 25965 | 1.69 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 71 | Cycle | Base Substitution | 26120 | 27.82 | 30.00 | 30.67 | -0.67 | Before |
| REGRESSION.HCC1395_tumor.L008 | 71 | Cycle | Base Insertion | 26016 | 1.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 71 | Cycle | Base Deletion | 26016 | 1.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 72 | Cycle | Base Substitution | 26045 | 34.67 | 30.00 | 31.27 | -1.27 | Before |
| REGRESSION.HCC1395_tumor.L008 | 72 | Cycle | Base Insertion | 25941 | 0.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 72 | Cycle | Base Deletion | 25941 | 1.35 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 73 | Cycle | Base Substitution | 26071 | 45.12 | 30.00 | 31.04 | -1.04 | Before |
| REGRESSION.HCC1395_tumor.L008 | 73 | Cycle | Base Insertion | 25960 | 0.65 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 73 | Cycle | Base Deletion | 25960 | 1.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 74 | Cycle | Base Substitution | 25877 | 42.11 | 29.00 | 30.76 | -1.76 | Before |
| REGRESSION.HCC1395_tumor.L008 | 74 | Cycle | Base Insertion | 25762 | 0.87 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 74 | Cycle | Base Deletion | 25762 | 1.04 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 75 | Cycle | Base Substitution | 25940 | 41.89 | 30.00 | 31.29 | -1.29 | Before |
| REGRESSION.HCC1395_tumor.L008 | 75 | Cycle | Base Insertion | 25820 | 1.22 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 75 | Cycle | Base Deletion | 25820 | 1.16 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 76 | Cycle | Base Substitution | 25881 | 38.95 | 29.00 | 30.81 | -1.81 | Before |
| REGRESSION.HCC1395_tumor.L008 | 76 | Cycle | Base Insertion | 25743 | 1.26 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 76 | Cycle | Base Deletion | 25743 | 0.68 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 77 | Cycle | Base Substitution | 25885 | 46.11 | 29.00 | 30.98 | -1.98 | Before |
| REGRESSION.HCC1395_tumor.L008 | 77 | Cycle | Base Insertion | 25751 | 0.84 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 77 | Cycle | Base Deletion | 25751 | 0.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 78 | Cycle | Base Substitution | 25830 | 34.64 | 30.00 | 31.00 | -1.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 78 | Cycle | Base Insertion | 25691 | 0.99 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 78 | Cycle | Base Deletion | 25691 | 1.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 79 | Cycle | Base Substitution | 25754 | 41.02 | 30.00 | 31.06 | -1.06 | Before |
| REGRESSION.HCC1395_tumor.L008 | 79 | Cycle | Base Insertion | 25600 | 0.76 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 79 | Cycle | Base Deletion | 25600 | 1.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 8 | Cycle | Base Substitution | 26785 | 34.17 | 30.00 | 31.07 | -1.07 | Before |
| REGRESSION.HCC1395_tumor.L008 | 8 | Cycle | Base Insertion | 26785 | 0.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 8 | Cycle | Base Deletion | 26785 | 1.19 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 80 | Cycle | Base Substitution | 25683 | 40.51 | 29.00 | 30.55 | -1.55 | Before |
| REGRESSION.HCC1395_tumor.L008 | 80 | Cycle | Base Insertion | 25531 | 0.75 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 80 | Cycle | Base Deletion | 25531 | 0.78 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 81 | Cycle | Base Substitution | 25669 | 35.09 | 30.00 | 30.54 | -0.54 | Before |
| REGRESSION.HCC1395_tumor.L008 | 81 | Cycle | Base Insertion | 25481 | 0.62 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 81 | Cycle | Base Deletion | 25481 | 0.99 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 82 | Cycle | Base Substitution | 25657 | 44.97 | 29.00 | 30.61 | -1.61 | Before |
| REGRESSION.HCC1395_tumor.L008 | 82 | Cycle | Base Insertion | 25486 | 0.80 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 82 | Cycle | Base Deletion | 25486 | 1.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 83 | Cycle | Base Substitution | 25559 | 32.59 | 30.00 | 30.98 | -0.98 | Before |
| REGRESSION.HCC1395_tumor.L008 | 83 | Cycle | Base Insertion | 25399 | 0.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 83 | Cycle | Base Deletion | 25399 | 1.24 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 84 | Cycle | Base Substitution | 25494 | 40.99 | 29.00 | 30.87 | -1.87 | Before |
| REGRESSION.HCC1395_tumor.L008 | 84 | Cycle | Base Insertion | 25328 | 0.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 84 | Cycle | Base Deletion | 25328 | 1.58 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 85 | Cycle | Base Substitution | 25537 | 39.10 | 29.00 | 30.75 | -1.75 | Before |
| REGRESSION.HCC1395_tumor.L008 | 85 | Cycle | Base Insertion | 25379 | 0.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 85 | Cycle | Base Deletion | 25379 | 1.30 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 86 | Cycle | Base Substitution | 25423 | 42.29 | 29.00 | 30.40 | -1.40 | Before |
| REGRESSION.HCC1395_tumor.L008 | 86 | Cycle | Base Insertion | 25238 | 0.42 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 86 | Cycle | Base Deletion | 25238 | 1.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 87 | Cycle | Base Substitution | 25417 | 25.72 | 30.00 | 30.77 | -0.77 | Before |
| REGRESSION.HCC1395_tumor.L008 | 87 | Cycle | Base Insertion | 25242 | 0.78 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 87 | Cycle | Base Deletion | 25242 | 1.65 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 88 | Cycle | Base Substitution | 25291 | 45.66 | 29.00 | 30.40 | -1.40 | Before |
| REGRESSION.HCC1395_tumor.L008 | 88 | Cycle | Base Insertion | 25111 | 0.81 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 88 | Cycle | Base Deletion | 25111 | 1.93 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 89 | Cycle | Base Substitution | 25262 | 34.74 | 30.00 | 30.71 | -0.71 | Before |
| REGRESSION.HCC1395_tumor.L008 | 89 | Cycle | Base Insertion | 25089 | 1.04 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 89 | Cycle | Base Deletion | 25089 | 1.63 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 9 | Cycle | Base Substitution | 26840 | 33.47 | 30.00 | 31.24 | -1.24 | Before |
| REGRESSION.HCC1395_tumor.L008 | 9 | Cycle | Base Insertion | 26840 | 0.47 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 9 | Cycle | Base Deletion | 26840 | 1.60 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 90 | Cycle | Base Substitution | 25305 | 32.26 | 30.00 | 30.96 | -0.96 | Before |
| REGRESSION.HCC1395_tumor.L008 | 90 | Cycle | Base Insertion | 25118 | 0.29 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 90 | Cycle | Base Deletion | 25118 | 1.32 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 91 | Cycle | Base Substitution | 25385 | 43.72 | 29.00 | 30.63 | -1.63 | Before |
| REGRESSION.HCC1395_tumor.L008 | 91 | Cycle | Base Insertion | 25199 | 0.17 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 91 | Cycle | Base Deletion | 25199 | 1.38 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 92 | Cycle | Base Substitution | 25199 | 47.75 | 29.00 | 30.48 | -1.48 | Before |
| REGRESSION.HCC1395_tumor.L008 | 92 | Cycle | Base Insertion | 25012 | 0.14 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 92 | Cycle | Base Deletion | 25012 | 1.18 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 93 | Cycle | Base Substitution | 25193 | 35.49 | 30.00 | 30.78 | -0.78 | Before |
| REGRESSION.HCC1395_tumor.L008 | 93 | Cycle | Base Insertion | 24982 | 0.13 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 93 | Cycle | Base Deletion | 24982 | 1.28 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 94 | Cycle | Base Substitution | 25067 | 33.19 | 30.00 | 30.46 | -0.46 | Before |
| REGRESSION.HCC1395_tumor.L008 | 94 | Cycle | Base Insertion | 24845 | 0.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 94 | Cycle | Base Deletion | 24845 | 1.56 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 95 | Cycle | Base Substitution | 25144 | 27.48 | 30.00 | 30.45 | -0.45 | Before |
| REGRESSION.HCC1395_tumor.L008 | 95 | Cycle | Base Insertion | 24903 | 0.77 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 95 | Cycle | Base Deletion | 24903 | 1.53 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 96 | Cycle | Base Substitution | 25069 | 40.38 | 29.00 | 30.74 | -1.74 | Before |
| REGRESSION.HCC1395_tumor.L008 | 96 | Cycle | Base Insertion | 24832 | 0.55 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 96 | Cycle | Base Deletion | 24832 | 1.52 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 97 | Cycle | Base Substitution | 24930 | 39.84 | 29.00 | 30.72 | -1.72 | Before |
| REGRESSION.HCC1395_tumor.L008 | 97 | Cycle | Base Insertion | 24687 | 0.36 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 97 | Cycle | Base Deletion | 24687 | 1.05 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 98 | Cycle | Base Substitution | 24950 | 42.39 | 29.00 | 30.52 | -1.52 | Before |
| REGRESSION.HCC1395_tumor.L008 | 98 | Cycle | Base Insertion | 24721 | 0.41 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 98 | Cycle | Base Deletion | 24721 | 1.27 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 99 | Cycle | Base Substitution | 24713 | 35.96 | 29.00 | 30.82 | -1.82 | Before |
| REGRESSION.HCC1395_tumor.L008 | 99 | Cycle | Base Insertion | 24497 | 0.64 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 99 | Cycle | Base Deletion | 24497 | 1.43 | 45.00 | 45.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 12 | QualityScore | Base Substitution | 81206 | 7793.84 | 10.00 | 12.00 | -2.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 24 | QualityScore | Base Substitution | 195517 | 783.61 | 24.00 | 24.00 | 0.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 40 | QualityScore | Base Substitution | 7269465 | 5346.35 | 31.00 | 40.00 | -9.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 45 | QualityScore | Base Insertion | 7546188 | 138.61 | 47.00 | 45.00 | 2.00 | Before |
| REGRESSION.HCC1395_tumor.L008 | 45 | QualityScore | Base Deletion | 7546188 | 374.21 | 43.00 | 45.00 | -2.00 | Before |
| REGRESSION.HCC1395_tumor.L001 | AA | Context | Base Substitution | 830743 | 1857.70 | 26.00 | 25.54 | 0.46 | After |
| REGRESSION.HCC1395_tumor.L001 | AAA | Context | Base Insertion | 294770 | 79.46 | 42.00 | 45.00 | -3.00 | After |
| REGRESSION.HCC1395_tumor.L001 | AAA | Context | Base Deletion | 294770 | 192.09 | 37.00 | 45.00 | -8.00 | After |
| REGRESSION.HCC1395_tumor.L001 | AAC | Context | Base Insertion | 131807 | 5.46 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | AAC | Context | Base Deletion | 131807 | 9.88 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | AAG | Context | Base Insertion | 197811 | 4.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | AAG | Context | Base Deletion | 197811 | 10.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | AAT | Context | Base Insertion | 172583 | 3.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | AAT | Context | Base Deletion | 172583 | 13.80 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L001 | AC | Context | Base Substitution | 529453 | 1892.69 | 24.00 | 24.72 | -0.72 | After |
| REGRESSION.HCC1395_tumor.L001 | ACA | Context | Base Insertion | 204598 | 21.28 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L001 | ACA | Context | Base Deletion | 204598 | 32.55 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L001 | ACC | Context | Base Insertion | 145829 | 7.31 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | ACC | Context | Base Deletion | 145829 | 4.51 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | ACG | Context | Base Insertion | 30470 | 0.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | ACG | Context | Base Deletion | 30470 | 2.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | ACT | Context | Base Insertion | 157053 | 1.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | ACT | Context | Base Deletion | 157053 | 9.99 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | AG | Context | Base Substitution | 797028 | 612.95 | 31.00 | 28.72 | 2.28 | After |
| REGRESSION.HCC1395_tumor.L001 | AGA | Context | Base Insertion | 220742 | 6.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | AGA | Context | Base Deletion | 220742 | 9.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | AGC | Context | Base Insertion | 192078 | 0.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | AGC | Context | Base Deletion | 192078 | 5.81 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | AGG | Context | Base Insertion | 226417 | 9.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | AGG | Context | Base Deletion | 226417 | 6.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | AGT | Context | Base Insertion | 154359 | 1.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | AGT | Context | Base Deletion | 154359 | 7.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | AT | Context | Base Substitution | 598624 | 615.89 | 30.00 | 27.64 | 2.36 | After |
| REGRESSION.HCC1395_tumor.L001 | ATA | Context | Base Insertion | 133681 | 9.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | ATA | Context | Base Deletion | 133681 | 3.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | ATC | Context | Base Insertion | 120099 | 1.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | ATC | Context | Base Deletion | 120099 | 6.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | ATG | Context | Base Insertion | 174061 | 3.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | ATG | Context | Base Deletion | 174061 | 2.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | ATT | Context | Base Insertion | 181531 | 2.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | ATT | Context | Base Deletion | 181531 | 7.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | CA | Context | Base Substitution | 854260 | 1753.72 | 27.00 | 26.49 | 0.51 | After |
| REGRESSION.HCC1395_tumor.L001 | CAA | Context | Base Insertion | 170936 | 7.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | CAA | Context | Base Deletion | 170936 | 11.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | CAC | Context | Base Insertion | 183370 | 21.63 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L001 | CAC | Context | Base Deletion | 183370 | 31.22 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L001 | CAG | Context | Base Insertion | 291127 | 8.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | CAG | Context | Base Deletion | 291127 | 9.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | CAT | Context | Base Insertion | 169706 | 7.37 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | CAT | Context | Base Deletion | 169706 | 3.77 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | CC | Context | Base Substitution | 761018 | 2432.52 | 25.00 | 24.63 | 0.37 | After |
| REGRESSION.HCC1395_tumor.L001 | CCA | Context | Base Insertion | 244512 | 6.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | CCA | Context | Base Deletion | 244512 | 6.42 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | CCC | Context | Base Insertion | 211372 | 11.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | CCC | Context | Base Deletion | 211372 | 15.63 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L001 | CCG | Context | Base Insertion | 53166 | 2.79 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | CCG | Context | Base Deletion | 53166 | 5.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | CCT | Context | Base Insertion | 241999 | 2.42 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | CCT | Context | Base Deletion | 241999 | 9.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | CG | Context | Base Substitution | 159047 | 555.73 | 25.00 | 24.96 | 0.04 | After |
| REGRESSION.HCC1395_tumor.L001 | CGA | Context | Base Insertion | 55931 | 3.51 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | CGA | Context | Base Deletion | 55931 | 0.37 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | CGC | Context | Base Insertion | 80167 | 1.77 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | CGC | Context | Base Deletion | 80167 | 5.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | CGG | Context | Base Insertion | 96719 | 1.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | CGG | Context | Base Deletion | 96719 | 9.02 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | CGT | Context | Base Insertion | 63058 | 1.18 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | CGT | Context | Base Deletion | 63058 | 1.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | CT | Context | Base Substitution | 835999 | 409.38 | 33.00 | 29.38 | 3.62 | After |
| REGRESSION.HCC1395_tumor.L001 | CTA | Context | Base Insertion | 95968 | 0.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | CTA | Context | Base Deletion | 95968 | 6.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | CTC | Context | Base Insertion | 200487 | 7.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | CTC | Context | Base Deletion | 200487 | 20.43 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L001 | CTG | Context | Base Insertion | 292152 | 3.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | CTG | Context | Base Deletion | 292152 | 10.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | CTT | Context | Base Insertion | 209522 | 5.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | CTT | Context | Base Deletion | 209522 | 8.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | GA | Context | Base Substitution | 699218 | 1006.13 | 28.00 | 26.97 | 1.03 | After |
| REGRESSION.HCC1395_tumor.L001 | GAA | Context | Base Insertion | 209157 | 4.51 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | GAA | Context | Base Deletion | 209157 | 8.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | GAC | Context | Base Insertion | 117697 | 3.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | GAC | Context | Base Deletion | 117697 | 3.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | GAG | Context | Base Insertion | 205626 | 2.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | GAG | Context | Base Deletion | 205626 | 10.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | GAT | Context | Base Insertion | 124150 | 1.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | GAT | Context | Base Deletion | 124150 | 1.94 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | GC | Context | Base Substitution | 660340 | 1439.18 | 27.00 | 26.06 | 0.94 | After |
| REGRESSION.HCC1395_tumor.L001 | GCA | Context | Base Insertion | 204099 | 4.48 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | GCA | Context | Base Deletion | 204099 | 4.57 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | GCC | Context | Base Insertion | 198323 | 3.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | GCC | Context | Base Deletion | 198323 | 8.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | GCG | Context | Base Insertion | 48387 | 1.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | GCG | Context | Base Deletion | 48387 | 6.29 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | GCT | Context | Base Insertion | 209236 | 2.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | GCT | Context | Base Deletion | 209236 | 5.29 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | GG | Context | Base Substitution | 786239 | 734.90 | 30.00 | 27.74 | 2.26 | After |
| REGRESSION.HCC1395_tumor.L001 | GGA | Context | Base Insertion | 213510 | 14.84 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | GGA | Context | Base Deletion | 213510 | 14.94 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | GGC | Context | Base Insertion | 195245 | 2.31 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | GGC | Context | Base Deletion | 195245 | 8.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | GGG | Context | Base Insertion | 217170 | 7.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | GGG | Context | Base Deletion | 217170 | 30.94 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L001 | GGT | Context | Base Insertion | 157846 | 3.17 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | GGT | Context | Base Deletion | 157846 | 4.86 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | GT | Context | Base Substitution | 590318 | 1022.92 | 28.00 | 27.01 | 0.99 | After |
| REGRESSION.HCC1395_tumor.L001 | GTA | Context | Base Insertion | 101499 | 4.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | GTA | Context | Base Deletion | 101499 | 1.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | GTC | Context | Base Insertion | 127019 | 2.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | GTC | Context | Base Deletion | 127019 | 3.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | GTG | Context | Base Insertion | 199947 | 14.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | GTG | Context | Base Deletion | 199947 | 37.57 | 43.00 | 45.00 | -2.00 | After |
| REGRESSION.HCC1395_tumor.L001 | GTT | Context | Base Insertion | 148579 | 4.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | GTT | Context | Base Deletion | 148579 | 12.63 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L001 | TA | Context | Base Substitution | 481419 | 1147.20 | 26.00 | 25.07 | 0.93 | After |
| REGRESSION.HCC1395_tumor.L001 | TAA | Context | Base Insertion | 148692 | 10.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | TAA | Context | Base Deletion | 148692 | 13.70 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L001 | TAC | Context | Base Insertion | 93188 | 0.85 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | TAC | Context | Base Deletion | 93188 | 4.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | TAG | Context | Base Insertion | 96135 | 3.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | TAG | Context | Base Deletion | 96135 | 0.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | TAT | Context | Base Insertion | 127903 | 1.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | TAT | Context | Base Deletion | 127903 | 4.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | TC | Context | Base Substitution | 644713 | 1665.67 | 26.00 | 26.16 | -0.16 | After |
| REGRESSION.HCC1395_tumor.L001 | TCA | Context | Base Insertion | 194383 | 5.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | TCA | Context | Base Deletion | 194383 | 12.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | TCC | Context | Base Insertion | 200648 | 30.51 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L001 | TCC | Context | Base Deletion | 200648 | 8.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | TCG | Context | Base Insertion | 25853 | 0.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | TCG | Context | Base Deletion | 25853 | 1.73 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | TCT | Context | Base Insertion | 222093 | 3.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | TCT | Context | Base Deletion | 222093 | 13.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | TG | Context | Base Substitution | 842457 | 383.01 | 33.00 | 29.42 | 3.58 | After |
| REGRESSION.HCC1395_tumor.L001 | TGA | Context | Base Insertion | 203625 | 1.77 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | TGA | Context | Base Deletion | 203625 | 3.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | TGC | Context | Base Insertion | 188637 | 2.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | TGC | Context | Base Deletion | 188637 | 4.18 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | TGG | Context | Base Insertion | 240143 | 4.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | TGG | Context | Base Deletion | 240143 | 12.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | TGT | Context | Base Insertion | 211309 | 14.77 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | TGT | Context | Base Deletion | 211309 | 38.43 | 43.00 | 45.00 | -2.00 | After |
| REGRESSION.HCC1395_tumor.L001 | TT | Context | Base Substitution | 837640 | 942.33 | 29.00 | 28.23 | 0.77 | After |
| REGRESSION.HCC1395_tumor.L001 | TTA | Context | Base Insertion | 146641 | 4.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | TTA | Context | Base Deletion | 146641 | 9.82 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | TTC | Context | Base Insertion | 193283 | 4.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | TTC | Context | Base Deletion | 193283 | 10.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | TTG | Context | Base Insertion | 170262 | 3.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | TTG | Context | Base Deletion | 170262 | 8.48 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | TTT | Context | Base Insertion | 292442 | 58.34 | 43.00 | 45.00 | -2.00 | After |
| REGRESSION.HCC1395_tumor.L001 | TTT | Context | Base Deletion | 292442 | 159.60 | 38.00 | 45.00 | -7.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -1 | Cycle | Base Substitution | 38415 | 162.84 | 24.00 | 23.54 | 0.46 | After |
| REGRESSION.HCC1395_tumor.L001 | -10 | Cycle | Base Substitution | 38750 | 57.68 | 28.00 | 27.98 | 0.02 | After |
| REGRESSION.HCC1395_tumor.L001 | -10 | Cycle | Base Insertion | 38750 | 1.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -10 | Cycle | Base Deletion | 38750 | 2.31 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -100 | Cycle | Base Substitution | 36396 | 81.26 | 26.00 | 26.37 | -0.37 | After |
| REGRESSION.HCC1395_tumor.L001 | -100 | Cycle | Base Insertion | 36109 | 1.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -100 | Cycle | Base Deletion | 36109 | 3.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -101 | Cycle | Base Substitution | 36298 | 93.30 | 26.00 | 26.61 | -0.61 | After |
| REGRESSION.HCC1395_tumor.L001 | -101 | Cycle | Base Insertion | 35997 | 1.79 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -101 | Cycle | Base Deletion | 35997 | 3.79 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -102 | Cycle | Base Substitution | 36280 | 93.25 | 26.00 | 26.60 | -0.60 | After |
| REGRESSION.HCC1395_tumor.L001 | -102 | Cycle | Base Insertion | 35960 | 0.95 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -102 | Cycle | Base Deletion | 35960 | 3.44 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -103 | Cycle | Base Substitution | 36046 | 89.91 | 26.00 | 26.48 | -0.48 | After |
| REGRESSION.HCC1395_tumor.L001 | -103 | Cycle | Base Insertion | 35726 | 1.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -103 | Cycle | Base Deletion | 35726 | 3.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -104 | Cycle | Base Substitution | 35977 | 76.54 | 27.00 | 26.41 | 0.59 | After |
| REGRESSION.HCC1395_tumor.L001 | -104 | Cycle | Base Insertion | 35646 | 2.47 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -104 | Cycle | Base Deletion | 35646 | 3.30 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -105 | Cycle | Base Substitution | 35882 | 76.84 | 27.00 | 26.18 | 0.82 | After |
| REGRESSION.HCC1395_tumor.L001 | -105 | Cycle | Base Insertion | 35542 | 1.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -105 | Cycle | Base Deletion | 35542 | 2.85 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -106 | Cycle | Base Substitution | 35917 | 81.91 | 26.00 | 26.45 | -0.45 | After |
| REGRESSION.HCC1395_tumor.L001 | -106 | Cycle | Base Insertion | 35594 | 2.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -106 | Cycle | Base Deletion | 35594 | 2.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -107 | Cycle | Base Substitution | 35723 | 66.78 | 27.00 | 26.46 | 0.54 | After |
| REGRESSION.HCC1395_tumor.L001 | -107 | Cycle | Base Insertion | 35408 | 0.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -107 | Cycle | Base Deletion | 35408 | 3.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -108 | Cycle | Base Substitution | 35743 | 83.33 | 26.00 | 26.57 | -0.57 | After |
| REGRESSION.HCC1395_tumor.L001 | -108 | Cycle | Base Insertion | 35417 | 0.84 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -108 | Cycle | Base Deletion | 35417 | 3.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -109 | Cycle | Base Substitution | 35632 | 86.16 | 26.00 | 26.58 | -0.58 | After |
| REGRESSION.HCC1395_tumor.L001 | -109 | Cycle | Base Insertion | 35316 | 0.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -109 | Cycle | Base Deletion | 35316 | 2.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -11 | Cycle | Base Substitution | 38736 | 62.51 | 28.00 | 27.67 | 0.33 | After |
| REGRESSION.HCC1395_tumor.L001 | -11 | Cycle | Base Insertion | 38736 | 1.38 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -11 | Cycle | Base Deletion | 38736 | 3.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -110 | Cycle | Base Substitution | 35605 | 79.86 | 26.00 | 26.37 | -0.37 | After |
| REGRESSION.HCC1395_tumor.L001 | -110 | Cycle | Base Insertion | 35268 | 0.82 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -110 | Cycle | Base Deletion | 35268 | 2.85 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -111 | Cycle | Base Substitution | 35420 | 81.13 | 26.00 | 26.37 | -0.37 | After |
| REGRESSION.HCC1395_tumor.L001 | -111 | Cycle | Base Insertion | 35058 | 0.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -111 | Cycle | Base Deletion | 35058 | 3.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -112 | Cycle | Base Substitution | 35406 | 65.29 | 27.00 | 26.80 | 0.20 | After |
| REGRESSION.HCC1395_tumor.L001 | -112 | Cycle | Base Insertion | 35037 | 0.64 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -112 | Cycle | Base Deletion | 35037 | 2.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -113 | Cycle | Base Substitution | 35312 | 76.34 | 27.00 | 26.46 | 0.54 | After |
| REGRESSION.HCC1395_tumor.L001 | -113 | Cycle | Base Insertion | 34965 | 2.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -113 | Cycle | Base Deletion | 34965 | 2.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -114 | Cycle | Base Substitution | 35193 | 87.55 | 26.00 | 26.62 | -0.62 | After |
| REGRESSION.HCC1395_tumor.L001 | -114 | Cycle | Base Insertion | 34855 | 0.81 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -114 | Cycle | Base Deletion | 34855 | 3.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -115 | Cycle | Base Substitution | 35153 | 88.34 | 26.00 | 26.37 | -0.37 | After |
| REGRESSION.HCC1395_tumor.L001 | -115 | Cycle | Base Insertion | 34812 | 1.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -115 | Cycle | Base Deletion | 34812 | 3.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -116 | Cycle | Base Substitution | 34992 | 80.93 | 26.00 | 26.54 | -0.54 | After |
| REGRESSION.HCC1395_tumor.L001 | -116 | Cycle | Base Insertion | 34646 | 2.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -116 | Cycle | Base Deletion | 34646 | 2.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -117 | Cycle | Base Substitution | 34894 | 83.70 | 26.00 | 26.25 | -0.25 | After |
| REGRESSION.HCC1395_tumor.L001 | -117 | Cycle | Base Insertion | 34527 | 1.10 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -117 | Cycle | Base Deletion | 34527 | 2.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -118 | Cycle | Base Substitution | 34892 | 68.50 | 27.00 | 26.38 | 0.62 | After |
| REGRESSION.HCC1395_tumor.L001 | -118 | Cycle | Base Insertion | 34494 | 3.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -118 | Cycle | Base Deletion | 34494 | 2.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -119 | Cycle | Base Substitution | 34793 | 74.36 | 27.00 | 26.41 | 0.59 | After |
| REGRESSION.HCC1395_tumor.L001 | -119 | Cycle | Base Insertion | 34405 | 0.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -119 | Cycle | Base Deletion | 34405 | 2.95 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -12 | Cycle | Base Substitution | 38715 | 37.37 | 29.00 | 27.87 | 1.13 | After |
| REGRESSION.HCC1395_tumor.L001 | -12 | Cycle | Base Insertion | 38715 | 1.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -12 | Cycle | Base Deletion | 38715 | 4.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -120 | Cycle | Base Substitution | 34646 | 92.58 | 26.00 | 26.37 | -0.37 | After |
| REGRESSION.HCC1395_tumor.L001 | -120 | Cycle | Base Insertion | 34296 | 0.88 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -120 | Cycle | Base Deletion | 34296 | 1.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -121 | Cycle | Base Substitution | 34618 | 83.66 | 26.00 | 26.16 | -0.16 | After |
| REGRESSION.HCC1395_tumor.L001 | -121 | Cycle | Base Insertion | 34258 | 0.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -121 | Cycle | Base Deletion | 34258 | 2.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -122 | Cycle | Base Substitution | 34398 | 75.91 | 27.00 | 26.20 | 0.80 | After |
| REGRESSION.HCC1395_tumor.L001 | -122 | Cycle | Base Insertion | 34050 | 1.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -122 | Cycle | Base Deletion | 34050 | 3.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -123 | Cycle | Base Substitution | 34407 | 90.86 | 26.00 | 25.61 | 0.39 | After |
| REGRESSION.HCC1395_tumor.L001 | -123 | Cycle | Base Insertion | 34036 | 1.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -123 | Cycle | Base Deletion | 34036 | 2.36 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -124 | Cycle | Base Substitution | 34289 | 79.48 | 26.00 | 26.33 | -0.33 | After |
| REGRESSION.HCC1395_tumor.L001 | -124 | Cycle | Base Insertion | 33885 | 1.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -124 | Cycle | Base Deletion | 33885 | 2.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -125 | Cycle | Base Substitution | 34240 | 80.73 | 26.00 | 26.23 | -0.23 | After |
| REGRESSION.HCC1395_tumor.L001 | -125 | Cycle | Base Insertion | 33853 | 1.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -125 | Cycle | Base Deletion | 33853 | 2.47 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -126 | Cycle | Base Substitution | 34175 | 79.30 | 26.00 | 26.31 | -0.31 | After |
| REGRESSION.HCC1395_tumor.L001 | -126 | Cycle | Base Insertion | 33781 | 2.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -126 | Cycle | Base Deletion | 33781 | 3.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -127 | Cycle | Base Substitution | 34151 | 87.25 | 26.00 | 25.77 | 0.23 | After |
| REGRESSION.HCC1395_tumor.L001 | -127 | Cycle | Base Insertion | 33764 | 2.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -127 | Cycle | Base Deletion | 33764 | 3.42 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -128 | Cycle | Base Substitution | 33930 | 78.02 | 26.00 | 26.50 | -0.50 | After |
| REGRESSION.HCC1395_tumor.L001 | -128 | Cycle | Base Insertion | 33537 | 2.31 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -128 | Cycle | Base Deletion | 33537 | 3.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -129 | Cycle | Base Substitution | 33823 | 92.89 | 26.00 | 25.65 | 0.35 | After |
| REGRESSION.HCC1395_tumor.L001 | -129 | Cycle | Base Insertion | 33447 | 1.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -129 | Cycle | Base Deletion | 33447 | 2.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -13 | Cycle | Base Substitution | 38723 | 50.68 | 28.00 | 27.76 | 0.24 | After |
| REGRESSION.HCC1395_tumor.L001 | -13 | Cycle | Base Insertion | 38723 | 1.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -13 | Cycle | Base Deletion | 38723 | 3.36 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -130 | Cycle | Base Substitution | 33769 | 69.69 | 27.00 | 26.25 | 0.75 | After |
| REGRESSION.HCC1395_tumor.L001 | -130 | Cycle | Base Insertion | 33375 | 1.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -130 | Cycle | Base Deletion | 33375 | 2.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -131 | Cycle | Base Substitution | 33627 | 89.15 | 26.00 | 26.31 | -0.31 | After |
| REGRESSION.HCC1395_tumor.L001 | -131 | Cycle | Base Insertion | 33233 | 0.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -131 | Cycle | Base Deletion | 33233 | 1.77 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -132 | Cycle | Base Substitution | 33578 | 79.94 | 26.00 | 26.26 | -0.26 | After |
| REGRESSION.HCC1395_tumor.L001 | -132 | Cycle | Base Insertion | 33171 | 2.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -132 | Cycle | Base Deletion | 33171 | 1.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -133 | Cycle | Base Substitution | 33436 | 72.00 | 27.00 | 26.29 | 0.71 | After |
| REGRESSION.HCC1395_tumor.L001 | -133 | Cycle | Base Insertion | 33028 | 1.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -133 | Cycle | Base Deletion | 33028 | 2.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -134 | Cycle | Base Substitution | 33316 | 66.53 | 27.00 | 26.29 | 0.71 | After |
| REGRESSION.HCC1395_tumor.L001 | -134 | Cycle | Base Insertion | 32910 | 1.21 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -134 | Cycle | Base Deletion | 32910 | 2.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -135 | Cycle | Base Substitution | 33258 | 77.35 | 26.00 | 26.18 | -0.18 | After |
| REGRESSION.HCC1395_tumor.L001 | -135 | Cycle | Base Insertion | 32835 | 1.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -135 | Cycle | Base Deletion | 32835 | 3.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -136 | Cycle | Base Substitution | 33045 | 80.27 | 26.00 | 26.20 | -0.20 | After |
| REGRESSION.HCC1395_tumor.L001 | -136 | Cycle | Base Insertion | 32605 | 1.30 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -136 | Cycle | Base Deletion | 32605 | 2.09 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -137 | Cycle | Base Substitution | 32924 | 72.09 | 27.00 | 26.03 | 0.97 | After |
| REGRESSION.HCC1395_tumor.L001 | -137 | Cycle | Base Insertion | 32475 | 0.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -137 | Cycle | Base Deletion | 32475 | 1.36 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -138 | Cycle | Base Substitution | 32864 | 69.06 | 27.00 | 26.58 | 0.42 | After |
| REGRESSION.HCC1395_tumor.L001 | -138 | Cycle | Base Insertion | 32367 | 0.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -138 | Cycle | Base Deletion | 32367 | 1.36 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -139 | Cycle | Base Substitution | 32813 | 72.71 | 26.00 | 26.04 | -0.04 | After |
| REGRESSION.HCC1395_tumor.L001 | -139 | Cycle | Base Insertion | 32321 | 0.72 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -139 | Cycle | Base Deletion | 32321 | 1.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -14 | Cycle | Base Substitution | 38734 | 61.84 | 28.00 | 27.66 | 0.34 | After |
| REGRESSION.HCC1395_tumor.L001 | -14 | Cycle | Base Insertion | 38734 | 1.72 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -14 | Cycle | Base Deletion | 38734 | 3.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -140 | Cycle | Base Substitution | 32764 | 71.67 | 27.00 | 26.11 | 0.89 | After |
| REGRESSION.HCC1395_tumor.L001 | -140 | Cycle | Base Insertion | 32231 | 0.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -140 | Cycle | Base Deletion | 32231 | 1.46 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -141 | Cycle | Base Substitution | 32607 | 57.28 | 27.00 | 26.17 | 0.83 | After |
| REGRESSION.HCC1395_tumor.L001 | -141 | Cycle | Base Insertion | 32054 | 0.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -141 | Cycle | Base Deletion | 32054 | 1.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -142 | Cycle | Base Substitution | 32512 | 58.33 | 27.00 | 26.23 | 0.77 | After |
| REGRESSION.HCC1395_tumor.L001 | -142 | Cycle | Base Insertion | 31905 | 0.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -142 | Cycle | Base Deletion | 31905 | 0.82 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -143 | Cycle | Base Substitution | 32253 | 55.96 | 27.00 | 26.47 | 0.53 | After |
| REGRESSION.HCC1395_tumor.L001 | -143 | Cycle | Base Insertion | 31619 | 0.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -143 | Cycle | Base Deletion | 31619 | 0.56 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -144 | Cycle | Base Substitution | 32159 | 52.91 | 27.00 | 26.25 | 0.75 | After |
| REGRESSION.HCC1395_tumor.L001 | -144 | Cycle | Base Insertion | 31476 | 0.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -144 | Cycle | Base Deletion | 31476 | 0.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -145 | Cycle | Base Substitution | 32024 | 42.56 | 28.00 | 26.50 | 1.50 | After |
| REGRESSION.HCC1395_tumor.L001 | -145 | Cycle | Base Insertion | 24738 | 0.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -145 | Cycle | Base Deletion | 24738 | 0.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -146 | Cycle | Base Substitution | 31818 | 22.35 | 28.00 | 26.19 | 1.81 | After |
| REGRESSION.HCC1395_tumor.L001 | -146 | Cycle | Base Insertion | 24614 | 1.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -146 | Cycle | Base Deletion | 24614 | 0.38 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -147 | Cycle | Base Substitution | 31697 | 16.12 | 27.00 | 23.13 | 3.87 | After |
| REGRESSION.HCC1395_tumor.L001 | -148 | Cycle | Base Substitution | 31408 | 17.87 | 24.00 | 16.09 | 7.91 | After |
| REGRESSION.HCC1395_tumor.L001 | -149 | Cycle | Base Substitution | 19643 | 22.49 | 22.00 | 14.17 | 7.83 | After |
| REGRESSION.HCC1395_tumor.L001 | -15 | Cycle | Base Substitution | 38618 | 46.73 | 28.00 | 27.79 | 0.21 | After |
| REGRESSION.HCC1395_tumor.L001 | -15 | Cycle | Base Insertion | 38618 | 1.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -15 | Cycle | Base Deletion | 38618 | 3.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -150 | Cycle | Base Substitution | 6903 | 14.34 | 27.00 | 26.55 | 0.45 | After |
| REGRESSION.HCC1395_tumor.L001 | -16 | Cycle | Base Substitution | 38661 | 63.07 | 28.00 | 27.74 | 0.26 | After |
| REGRESSION.HCC1395_tumor.L001 | -16 | Cycle | Base Insertion | 38661 | 1.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -16 | Cycle | Base Deletion | 38661 | 3.46 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -17 | Cycle | Base Substitution | 38694 | 60.51 | 28.00 | 27.76 | 0.24 | After |
| REGRESSION.HCC1395_tumor.L001 | -17 | Cycle | Base Insertion | 38693 | 2.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -17 | Cycle | Base Deletion | 38693 | 3.55 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -18 | Cycle | Base Substitution | 38764 | 48.95 | 28.00 | 27.87 | 0.13 | After |
| REGRESSION.HCC1395_tumor.L001 | -18 | Cycle | Base Insertion | 38763 | 1.31 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -18 | Cycle | Base Deletion | 38763 | 4.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -19 | Cycle | Base Substitution | 38527 | 61.80 | 28.00 | 27.66 | 0.34 | After |
| REGRESSION.HCC1395_tumor.L001 | -19 | Cycle | Base Insertion | 38526 | 1.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -19 | Cycle | Base Deletion | 38526 | 3.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -2 | Cycle | Base Substitution | 38836 | 128.98 | 25.00 | 25.65 | -0.65 | After |
| REGRESSION.HCC1395_tumor.L001 | -20 | Cycle | Base Substitution | 38674 | 45.17 | 29.00 | 27.61 | 1.39 | After |
| REGRESSION.HCC1395_tumor.L001 | -20 | Cycle | Base Insertion | 38673 | 1.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -20 | Cycle | Base Deletion | 38673 | 4.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -21 | Cycle | Base Substitution | 38540 | 56.43 | 28.00 | 27.87 | 0.13 | After |
| REGRESSION.HCC1395_tumor.L001 | -21 | Cycle | Base Insertion | 38540 | 1.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -21 | Cycle | Base Deletion | 38540 | 3.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -22 | Cycle | Base Substitution | 38600 | 56.46 | 28.00 | 27.83 | 0.17 | After |
| REGRESSION.HCC1395_tumor.L001 | -22 | Cycle | Base Insertion | 38599 | 1.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -22 | Cycle | Base Deletion | 38599 | 3.21 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -23 | Cycle | Base Substitution | 38612 | 51.67 | 28.00 | 27.78 | 0.22 | After |
| REGRESSION.HCC1395_tumor.L001 | -23 | Cycle | Base Insertion | 38611 | 1.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -23 | Cycle | Base Deletion | 38611 | 3.46 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -24 | Cycle | Base Substitution | 38609 | 51.98 | 28.00 | 27.80 | 0.20 | After |
| REGRESSION.HCC1395_tumor.L001 | -24 | Cycle | Base Insertion | 38608 | 2.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -24 | Cycle | Base Deletion | 38608 | 3.31 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -25 | Cycle | Base Substitution | 38564 | 57.68 | 28.00 | 27.76 | 0.24 | After |
| REGRESSION.HCC1395_tumor.L001 | -25 | Cycle | Base Insertion | 38563 | 3.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -25 | Cycle | Base Deletion | 38563 | 3.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -26 | Cycle | Base Substitution | 38430 | 50.85 | 28.00 | 26.89 | 1.11 | After |
| REGRESSION.HCC1395_tumor.L001 | -26 | Cycle | Base Insertion | 38430 | 1.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -26 | Cycle | Base Deletion | 38430 | 2.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -27 | Cycle | Base Substitution | 38560 | 42.28 | 29.00 | 27.18 | 1.82 | After |
| REGRESSION.HCC1395_tumor.L001 | -27 | Cycle | Base Insertion | 38559 | 1.48 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -27 | Cycle | Base Deletion | 38559 | 3.36 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -28 | Cycle | Base Substitution | 38604 | 69.23 | 27.00 | 26.56 | 0.44 | After |
| REGRESSION.HCC1395_tumor.L001 | -28 | Cycle | Base Insertion | 38600 | 2.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -28 | Cycle | Base Deletion | 38600 | 4.26 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -29 | Cycle | Base Substitution | 38517 | 39.48 | 29.00 | 27.30 | 1.70 | After |
| REGRESSION.HCC1395_tumor.L001 | -29 | Cycle | Base Insertion | 38512 | 1.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -29 | Cycle | Base Deletion | 38512 | 3.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -3 | Cycle | Base Substitution | 38935 | 127.08 | 25.00 | 26.16 | -1.16 | After |
| REGRESSION.HCC1395_tumor.L001 | -30 | Cycle | Base Substitution | 38508 | 65.87 | 27.00 | 26.74 | 0.26 | After |
| REGRESSION.HCC1395_tumor.L001 | -30 | Cycle | Base Insertion | 38500 | 2.46 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -30 | Cycle | Base Deletion | 38500 | 4.84 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -31 | Cycle | Base Substitution | 38536 | 57.81 | 28.00 | 27.17 | 0.83 | After |
| REGRESSION.HCC1395_tumor.L001 | -31 | Cycle | Base Insertion | 38529 | 2.18 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -31 | Cycle | Base Deletion | 38529 | 4.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -32 | Cycle | Base Substitution | 38448 | 54.90 | 28.00 | 26.81 | 1.19 | After |
| REGRESSION.HCC1395_tumor.L001 | -32 | Cycle | Base Insertion | 38442 | 2.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -32 | Cycle | Base Deletion | 38442 | 3.99 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -33 | Cycle | Base Substitution | 38465 | 40.30 | 29.00 | 27.35 | 1.65 | After |
| REGRESSION.HCC1395_tumor.L001 | -33 | Cycle | Base Insertion | 38461 | 3.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -33 | Cycle | Base Deletion | 38461 | 4.48 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -34 | Cycle | Base Substitution | 38428 | 48.38 | 28.00 | 26.88 | 1.12 | After |
| REGRESSION.HCC1395_tumor.L001 | -34 | Cycle | Base Insertion | 38421 | 1.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -34 | Cycle | Base Deletion | 38421 | 4.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -35 | Cycle | Base Substitution | 38366 | 44.67 | 28.00 | 26.98 | 1.02 | After |
| REGRESSION.HCC1395_tumor.L001 | -35 | Cycle | Base Insertion | 38358 | 2.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -35 | Cycle | Base Deletion | 38358 | 3.36 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -36 | Cycle | Base Substitution | 38471 | 55.24 | 28.00 | 27.17 | 0.83 | After |
| REGRESSION.HCC1395_tumor.L001 | -36 | Cycle | Base Insertion | 38467 | 2.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -36 | Cycle | Base Deletion | 38467 | 3.38 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -37 | Cycle | Base Substitution | 38451 | 50.91 | 28.00 | 27.03 | 0.97 | After |
| REGRESSION.HCC1395_tumor.L001 | -37 | Cycle | Base Insertion | 38447 | 1.84 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -37 | Cycle | Base Deletion | 38447 | 3.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -38 | Cycle | Base Substitution | 38329 | 71.82 | 27.00 | 26.99 | 0.01 | After |
| REGRESSION.HCC1395_tumor.L001 | -38 | Cycle | Base Insertion | 38322 | 2.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -38 | Cycle | Base Deletion | 38322 | 3.73 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -39 | Cycle | Base Substitution | 38318 | 47.76 | 28.00 | 26.98 | 1.02 | After |
| REGRESSION.HCC1395_tumor.L001 | -39 | Cycle | Base Insertion | 38313 | 2.48 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -39 | Cycle | Base Deletion | 38313 | 4.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -4 | Cycle | Base Substitution | 38798 | 69.20 | 27.00 | 26.62 | 0.38 | After |
| REGRESSION.HCC1395_tumor.L001 | -40 | Cycle | Base Substitution | 38310 | 54.86 | 28.00 | 27.09 | 0.91 | After |
| REGRESSION.HCC1395_tumor.L001 | -40 | Cycle | Base Insertion | 38305 | 1.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -40 | Cycle | Base Deletion | 38305 | 4.84 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -41 | Cycle | Base Substitution | 38304 | 47.15 | 28.00 | 27.20 | 0.80 | After |
| REGRESSION.HCC1395_tumor.L001 | -41 | Cycle | Base Insertion | 38297 | 2.26 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -41 | Cycle | Base Deletion | 38297 | 5.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -42 | Cycle | Base Substitution | 38364 | 59.35 | 28.00 | 27.25 | 0.75 | After |
| REGRESSION.HCC1395_tumor.L001 | -42 | Cycle | Base Insertion | 38358 | 2.36 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -42 | Cycle | Base Deletion | 38358 | 5.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -43 | Cycle | Base Substitution | 38371 | 54.27 | 28.00 | 27.15 | 0.85 | After |
| REGRESSION.HCC1395_tumor.L001 | -43 | Cycle | Base Insertion | 38363 | 3.37 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -43 | Cycle | Base Deletion | 38363 | 5.07 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -44 | Cycle | Base Substitution | 38389 | 60.97 | 28.00 | 27.14 | 0.86 | After |
| REGRESSION.HCC1395_tumor.L001 | -44 | Cycle | Base Insertion | 38379 | 1.79 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -44 | Cycle | Base Deletion | 38379 | 4.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -45 | Cycle | Base Substitution | 38330 | 61.82 | 27.00 | 26.85 | 0.15 | After |
| REGRESSION.HCC1395_tumor.L001 | -45 | Cycle | Base Insertion | 38317 | 4.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -45 | Cycle | Base Deletion | 38317 | 3.98 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -46 | Cycle | Base Substitution | 38344 | 50.84 | 28.00 | 26.91 | 1.09 | After |
| REGRESSION.HCC1395_tumor.L001 | -46 | Cycle | Base Insertion | 38333 | 2.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -46 | Cycle | Base Deletion | 38333 | 4.72 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -47 | Cycle | Base Substitution | 38275 | 67.11 | 27.00 | 26.91 | 0.09 | After |
| REGRESSION.HCC1395_tumor.L001 | -47 | Cycle | Base Insertion | 38267 | 2.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -47 | Cycle | Base Deletion | 38267 | 3.82 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -48 | Cycle | Base Substitution | 38235 | 56.69 | 28.00 | 26.99 | 1.01 | After |
| REGRESSION.HCC1395_tumor.L001 | -48 | Cycle | Base Insertion | 38222 | 2.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -48 | Cycle | Base Deletion | 38222 | 3.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -49 | Cycle | Base Substitution | 38266 | 58.32 | 28.00 | 26.77 | 1.23 | After |
| REGRESSION.HCC1395_tumor.L001 | -49 | Cycle | Base Insertion | 38249 | 2.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -49 | Cycle | Base Deletion | 38249 | 4.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -5 | Cycle | Base Substitution | 38804 | 45.42 | 29.00 | 27.55 | 1.45 | After |
| REGRESSION.HCC1395_tumor.L001 | -5 | Cycle | Base Insertion | 38804 | 0.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -5 | Cycle | Base Deletion | 38804 | 0.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -50 | Cycle | Base Substitution | 38328 | 56.66 | 28.00 | 26.89 | 1.11 | After |
| REGRESSION.HCC1395_tumor.L001 | -50 | Cycle | Base Insertion | 38304 | 3.36 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -50 | Cycle | Base Deletion | 38304 | 4.51 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -51 | Cycle | Base Substitution | 38370 | 68.71 | 27.00 | 27.13 | -0.13 | After |
| REGRESSION.HCC1395_tumor.L001 | -51 | Cycle | Base Insertion | 38345 | 3.26 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -51 | Cycle | Base Deletion | 38345 | 4.48 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -52 | Cycle | Base Substitution | 38245 | 68.13 | 27.00 | 27.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -52 | Cycle | Base Insertion | 38221 | 2.94 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -52 | Cycle | Base Deletion | 38221 | 5.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -53 | Cycle | Base Substitution | 38261 | 60.98 | 27.00 | 26.77 | 0.23 | After |
| REGRESSION.HCC1395_tumor.L001 | -53 | Cycle | Base Insertion | 38240 | 2.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -53 | Cycle | Base Deletion | 38240 | 4.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -54 | Cycle | Base Substitution | 38225 | 67.38 | 28.00 | 27.06 | 0.94 | After |
| REGRESSION.HCC1395_tumor.L001 | -54 | Cycle | Base Insertion | 38199 | 2.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -54 | Cycle | Base Deletion | 38199 | 4.82 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -55 | Cycle | Base Substitution | 38368 | 75.54 | 27.00 | 26.90 | 0.10 | After |
| REGRESSION.HCC1395_tumor.L001 | -55 | Cycle | Base Insertion | 38338 | 1.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -55 | Cycle | Base Deletion | 38338 | 4.64 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -56 | Cycle | Base Substitution | 38082 | 69.64 | 27.00 | 26.99 | 0.01 | After |
| REGRESSION.HCC1395_tumor.L001 | -56 | Cycle | Base Insertion | 38043 | 2.38 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -56 | Cycle | Base Deletion | 38043 | 3.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -57 | Cycle | Base Substitution | 38229 | 59.34 | 28.00 | 27.02 | 0.98 | After |
| REGRESSION.HCC1395_tumor.L001 | -57 | Cycle | Base Insertion | 38174 | 2.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -57 | Cycle | Base Deletion | 38174 | 3.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -58 | Cycle | Base Substitution | 38275 | 53.38 | 28.00 | 27.42 | 0.58 | After |
| REGRESSION.HCC1395_tumor.L001 | -58 | Cycle | Base Insertion | 38223 | 1.98 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -58 | Cycle | Base Deletion | 38223 | 3.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -59 | Cycle | Base Substitution | 38164 | 61.52 | 27.00 | 26.81 | 0.19 | After |
| REGRESSION.HCC1395_tumor.L001 | -59 | Cycle | Base Insertion | 38094 | 2.29 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -59 | Cycle | Base Deletion | 38094 | 3.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -6 | Cycle | Base Substitution | 38583 | 61.79 | 28.00 | 27.30 | 0.70 | After |
| REGRESSION.HCC1395_tumor.L001 | -6 | Cycle | Base Insertion | 38583 | 0.48 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -6 | Cycle | Base Deletion | 38583 | 0.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -60 | Cycle | Base Substitution | 38148 | 76.34 | 27.00 | 27.01 | -0.01 | After |
| REGRESSION.HCC1395_tumor.L001 | -60 | Cycle | Base Insertion | 38083 | 2.57 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -60 | Cycle | Base Deletion | 38083 | 3.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -61 | Cycle | Base Substitution | 37991 | 72.13 | 27.00 | 26.98 | 0.02 | After |
| REGRESSION.HCC1395_tumor.L001 | -61 | Cycle | Base Insertion | 37921 | 2.17 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -61 | Cycle | Base Deletion | 37921 | 3.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -62 | Cycle | Base Substitution | 38186 | 59.13 | 27.00 | 26.85 | 0.15 | After |
| REGRESSION.HCC1395_tumor.L001 | -62 | Cycle | Base Insertion | 38110 | 2.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -62 | Cycle | Base Deletion | 38110 | 3.55 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -63 | Cycle | Base Substitution | 37982 | 52.04 | 28.00 | 27.45 | 0.55 | After |
| REGRESSION.HCC1395_tumor.L001 | -63 | Cycle | Base Insertion | 37913 | 2.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -63 | Cycle | Base Deletion | 37913 | 3.30 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -64 | Cycle | Base Substitution | 37931 | 51.47 | 28.00 | 27.07 | 0.93 | After |
| REGRESSION.HCC1395_tumor.L001 | -64 | Cycle | Base Insertion | 37852 | 1.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -64 | Cycle | Base Deletion | 37852 | 3.64 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -65 | Cycle | Base Substitution | 37931 | 74.69 | 27.00 | 26.89 | 0.11 | After |
| REGRESSION.HCC1395_tumor.L001 | -65 | Cycle | Base Insertion | 37847 | 1.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -65 | Cycle | Base Deletion | 37847 | 3.94 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -66 | Cycle | Base Substitution | 37971 | 64.62 | 27.00 | 26.93 | 0.07 | After |
| REGRESSION.HCC1395_tumor.L001 | -66 | Cycle | Base Insertion | 37874 | 1.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -66 | Cycle | Base Deletion | 37874 | 3.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -67 | Cycle | Base Substitution | 37940 | 51.85 | 28.00 | 26.87 | 1.13 | After |
| REGRESSION.HCC1395_tumor.L001 | -67 | Cycle | Base Insertion | 37840 | 1.55 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -67 | Cycle | Base Deletion | 37840 | 3.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -68 | Cycle | Base Substitution | 37883 | 62.20 | 27.00 | 26.80 | 0.20 | After |
| REGRESSION.HCC1395_tumor.L001 | -68 | Cycle | Base Insertion | 37777 | 1.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -68 | Cycle | Base Deletion | 37777 | 2.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -69 | Cycle | Base Substitution | 37912 | 68.04 | 27.00 | 26.83 | 0.17 | After |
| REGRESSION.HCC1395_tumor.L001 | -69 | Cycle | Base Insertion | 37800 | 2.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -69 | Cycle | Base Deletion | 37800 | 2.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -7 | Cycle | Base Substitution | 38727 | 74.40 | 27.00 | 26.95 | 0.05 | After |
| REGRESSION.HCC1395_tumor.L001 | -7 | Cycle | Base Insertion | 38727 | 0.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -7 | Cycle | Base Deletion | 38727 | 1.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -70 | Cycle | Base Substitution | 37812 | 55.96 | 28.00 | 27.21 | 0.79 | After |
| REGRESSION.HCC1395_tumor.L001 | -70 | Cycle | Base Insertion | 37705 | 2.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -70 | Cycle | Base Deletion | 37705 | 2.81 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -71 | Cycle | Base Substitution | 37793 | 59.96 | 28.00 | 27.05 | 0.95 | After |
| REGRESSION.HCC1395_tumor.L001 | -71 | Cycle | Base Insertion | 37669 | 1.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -71 | Cycle | Base Deletion | 37669 | 3.48 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -72 | Cycle | Base Substitution | 37784 | 63.60 | 27.00 | 26.89 | 0.11 | After |
| REGRESSION.HCC1395_tumor.L001 | -72 | Cycle | Base Insertion | 37659 | 1.42 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -72 | Cycle | Base Deletion | 37659 | 3.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -73 | Cycle | Base Substitution | 37723 | 70.31 | 27.00 | 26.90 | 0.10 | After |
| REGRESSION.HCC1395_tumor.L001 | -73 | Cycle | Base Insertion | 37594 | 1.10 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -73 | Cycle | Base Deletion | 37594 | 3.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -74 | Cycle | Base Substitution | 37700 | 72.49 | 27.00 | 26.93 | 0.07 | After |
| REGRESSION.HCC1395_tumor.L001 | -74 | Cycle | Base Insertion | 37560 | 1.57 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -74 | Cycle | Base Deletion | 37560 | 4.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -75 | Cycle | Base Substitution | 37728 | 76.83 | 27.00 | 26.86 | 0.14 | After |
| REGRESSION.HCC1395_tumor.L001 | -75 | Cycle | Base Insertion | 37584 | 1.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -75 | Cycle | Base Deletion | 37584 | 4.64 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -76 | Cycle | Base Substitution | 37566 | 80.84 | 27.00 | 26.91 | 0.09 | After |
| REGRESSION.HCC1395_tumor.L001 | -76 | Cycle | Base Insertion | 37420 | 1.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -76 | Cycle | Base Deletion | 37420 | 4.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -77 | Cycle | Base Substitution | 37615 | 67.44 | 27.00 | 26.85 | 0.15 | After |
| REGRESSION.HCC1395_tumor.L001 | -77 | Cycle | Base Insertion | 37467 | 2.36 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -77 | Cycle | Base Deletion | 37467 | 4.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -78 | Cycle | Base Substitution | 37472 | 64.47 | 27.00 | 26.72 | 0.28 | After |
| REGRESSION.HCC1395_tumor.L001 | -78 | Cycle | Base Insertion | 37309 | 0.72 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -78 | Cycle | Base Deletion | 37309 | 5.77 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -79 | Cycle | Base Substitution | 37553 | 66.53 | 27.00 | 26.70 | 0.30 | After |
| REGRESSION.HCC1395_tumor.L001 | -79 | Cycle | Base Insertion | 37368 | 0.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -79 | Cycle | Base Deletion | 37368 | 4.95 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -8 | Cycle | Base Substitution | 38697 | 74.60 | 27.00 | 27.14 | -0.14 | After |
| REGRESSION.HCC1395_tumor.L001 | -8 | Cycle | Base Insertion | 38697 | 0.47 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -8 | Cycle | Base Deletion | 38697 | 2.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -80 | Cycle | Base Substitution | 37423 | 76.71 | 27.00 | 26.55 | 0.45 | After |
| REGRESSION.HCC1395_tumor.L001 | -80 | Cycle | Base Insertion | 37253 | 2.81 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -80 | Cycle | Base Deletion | 37253 | 5.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -81 | Cycle | Base Substitution | 37414 | 69.37 | 27.00 | 26.93 | 0.07 | After |
| REGRESSION.HCC1395_tumor.L001 | -81 | Cycle | Base Insertion | 37223 | 0.72 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -81 | Cycle | Base Deletion | 37223 | 4.79 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -82 | Cycle | Base Substitution | 37416 | 77.85 | 27.00 | 26.69 | 0.31 | After |
| REGRESSION.HCC1395_tumor.L001 | -82 | Cycle | Base Insertion | 37223 | 1.09 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -82 | Cycle | Base Deletion | 37223 | 3.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -83 | Cycle | Base Substitution | 37176 | 74.18 | 27.00 | 26.99 | 0.01 | After |
| REGRESSION.HCC1395_tumor.L001 | -83 | Cycle | Base Insertion | 36984 | 1.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -83 | Cycle | Base Deletion | 36984 | 3.56 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -84 | Cycle | Base Substitution | 37287 | 83.17 | 26.00 | 26.65 | -0.65 | After |
| REGRESSION.HCC1395_tumor.L001 | -84 | Cycle | Base Insertion | 37098 | 1.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -84 | Cycle | Base Deletion | 37098 | 3.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -85 | Cycle | Base Substitution | 37195 | 61.69 | 27.00 | 26.64 | 0.36 | After |
| REGRESSION.HCC1395_tumor.L001 | -85 | Cycle | Base Insertion | 36977 | 0.77 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -85 | Cycle | Base Deletion | 36977 | 3.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -86 | Cycle | Base Substitution | 37158 | 78.66 | 27.00 | 26.55 | 0.45 | After |
| REGRESSION.HCC1395_tumor.L001 | -86 | Cycle | Base Insertion | 36956 | 1.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -86 | Cycle | Base Deletion | 36956 | 2.96 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -87 | Cycle | Base Substitution | 37067 | 83.12 | 26.00 | 26.58 | -0.58 | After |
| REGRESSION.HCC1395_tumor.L001 | -87 | Cycle | Base Insertion | 36836 | 0.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -87 | Cycle | Base Deletion | 36836 | 2.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -88 | Cycle | Base Substitution | 36991 | 73.80 | 27.00 | 26.52 | 0.48 | After |
| REGRESSION.HCC1395_tumor.L001 | -88 | Cycle | Base Insertion | 36780 | 1.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -88 | Cycle | Base Deletion | 36780 | 2.79 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -89 | Cycle | Base Substitution | 37078 | 80.72 | 27.00 | 26.49 | 0.51 | After |
| REGRESSION.HCC1395_tumor.L001 | -89 | Cycle | Base Insertion | 36862 | 1.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -89 | Cycle | Base Deletion | 36862 | 2.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -9 | Cycle | Base Substitution | 38896 | 53.17 | 28.00 | 27.26 | 0.74 | After |
| REGRESSION.HCC1395_tumor.L001 | -9 | Cycle | Base Insertion | 38896 | 0.94 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -9 | Cycle | Base Deletion | 38896 | 3.26 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -90 | Cycle | Base Substitution | 36975 | 79.55 | 27.00 | 26.48 | 0.52 | After |
| REGRESSION.HCC1395_tumor.L001 | -90 | Cycle | Base Insertion | 36736 | 1.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -90 | Cycle | Base Deletion | 36736 | 2.73 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -91 | Cycle | Base Substitution | 36878 | 71.08 | 27.00 | 26.38 | 0.62 | After |
| REGRESSION.HCC1395_tumor.L001 | -91 | Cycle | Base Insertion | 36650 | 0.94 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -91 | Cycle | Base Deletion | 36650 | 2.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -92 | Cycle | Base Substitution | 36849 | 63.59 | 27.00 | 26.95 | 0.05 | After |
| REGRESSION.HCC1395_tumor.L001 | -92 | Cycle | Base Insertion | 36590 | 0.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -92 | Cycle | Base Deletion | 36590 | 3.31 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -93 | Cycle | Base Substitution | 36704 | 80.98 | 27.00 | 26.81 | 0.19 | After |
| REGRESSION.HCC1395_tumor.L001 | -93 | Cycle | Base Insertion | 36445 | 1.09 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -93 | Cycle | Base Deletion | 36445 | 3.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -94 | Cycle | Base Substitution | 36874 | 72.99 | 27.00 | 26.94 | 0.06 | After |
| REGRESSION.HCC1395_tumor.L001 | -94 | Cycle | Base Insertion | 36607 | 1.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -94 | Cycle | Base Deletion | 36607 | 3.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -95 | Cycle | Base Substitution | 36646 | 80.69 | 27.00 | 26.46 | 0.54 | After |
| REGRESSION.HCC1395_tumor.L001 | -95 | Cycle | Base Insertion | 36344 | 1.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -95 | Cycle | Base Deletion | 36344 | 3.56 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -96 | Cycle | Base Substitution | 36679 | 81.91 | 26.00 | 26.58 | -0.58 | After |
| REGRESSION.HCC1395_tumor.L001 | -96 | Cycle | Base Insertion | 36367 | 0.72 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -96 | Cycle | Base Deletion | 36367 | 3.02 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -97 | Cycle | Base Substitution | 36557 | 72.89 | 27.00 | 26.64 | 0.36 | After |
| REGRESSION.HCC1395_tumor.L001 | -97 | Cycle | Base Insertion | 36273 | 0.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -97 | Cycle | Base Deletion | 36273 | 2.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -98 | Cycle | Base Substitution | 36449 | 84.85 | 26.00 | 26.05 | -0.05 | After |
| REGRESSION.HCC1395_tumor.L001 | -98 | Cycle | Base Insertion | 36174 | 3.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -98 | Cycle | Base Deletion | 36174 | 2.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -99 | Cycle | Base Substitution | 36411 | 85.82 | 26.00 | 26.68 | -0.68 | After |
| REGRESSION.HCC1395_tumor.L001 | -99 | Cycle | Base Insertion | 36136 | 0.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | -99 | Cycle | Base Deletion | 36136 | 3.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 1 | Cycle | Base Substitution | 38453 | 83.46 | 26.00 | 25.97 | 0.03 | After |
| REGRESSION.HCC1395_tumor.L001 | 10 | Cycle | Base Substitution | 38774 | 48.54 | 28.00 | 27.66 | 0.34 | After |
| REGRESSION.HCC1395_tumor.L001 | 10 | Cycle | Base Insertion | 38774 | 1.99 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 10 | Cycle | Base Deletion | 38774 | 2.07 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 100 | Cycle | Base Substitution | 36475 | 68.68 | 27.00 | 27.06 | -0.06 | After |
| REGRESSION.HCC1395_tumor.L001 | 100 | Cycle | Base Insertion | 36180 | 0.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 100 | Cycle | Base Deletion | 36180 | 2.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 101 | Cycle | Base Substitution | 36332 | 44.17 | 28.00 | 26.82 | 1.18 | After |
| REGRESSION.HCC1395_tumor.L001 | 101 | Cycle | Base Insertion | 36009 | 0.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 101 | Cycle | Base Deletion | 36009 | 2.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 102 | Cycle | Base Substitution | 36155 | 81.19 | 26.00 | 26.86 | -0.86 | After |
| REGRESSION.HCC1395_tumor.L001 | 102 | Cycle | Base Insertion | 35835 | 0.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 102 | Cycle | Base Deletion | 35835 | 3.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 103 | Cycle | Base Substitution | 36065 | 50.93 | 28.00 | 26.89 | 1.11 | After |
| REGRESSION.HCC1395_tumor.L001 | 103 | Cycle | Base Insertion | 35736 | 0.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 103 | Cycle | Base Deletion | 35736 | 4.09 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 104 | Cycle | Base Substitution | 36085 | 61.29 | 28.00 | 27.07 | 0.93 | After |
| REGRESSION.HCC1395_tumor.L001 | 104 | Cycle | Base Insertion | 35770 | 0.48 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 104 | Cycle | Base Deletion | 35770 | 3.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 105 | Cycle | Base Substitution | 35930 | 59.02 | 27.00 | 26.95 | 0.05 | After |
| REGRESSION.HCC1395_tumor.L001 | 105 | Cycle | Base Insertion | 35600 | 0.84 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 105 | Cycle | Base Deletion | 35600 | 3.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 106 | Cycle | Base Substitution | 35785 | 69.80 | 27.00 | 26.85 | 0.15 | After |
| REGRESSION.HCC1395_tumor.L001 | 106 | Cycle | Base Insertion | 35461 | 0.85 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 106 | Cycle | Base Deletion | 35461 | 3.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 107 | Cycle | Base Substitution | 35905 | 66.17 | 27.00 | 26.84 | 0.16 | After |
| REGRESSION.HCC1395_tumor.L001 | 107 | Cycle | Base Insertion | 35593 | 0.85 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 107 | Cycle | Base Deletion | 35593 | 3.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 108 | Cycle | Base Substitution | 35737 | 86.90 | 26.00 | 26.66 | -0.66 | After |
| REGRESSION.HCC1395_tumor.L001 | 108 | Cycle | Base Insertion | 35407 | 1.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 108 | Cycle | Base Deletion | 35407 | 3.29 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 109 | Cycle | Base Substitution | 35594 | 67.08 | 27.00 | 26.59 | 0.41 | After |
| REGRESSION.HCC1395_tumor.L001 | 109 | Cycle | Base Insertion | 35268 | 1.36 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 109 | Cycle | Base Deletion | 35268 | 2.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 11 | Cycle | Base Substitution | 38707 | 43.11 | 29.00 | 27.49 | 1.51 | After |
| REGRESSION.HCC1395_tumor.L001 | 11 | Cycle | Base Insertion | 38707 | 1.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 11 | Cycle | Base Deletion | 38707 | 2.73 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 110 | Cycle | Base Substitution | 35516 | 57.90 | 27.00 | 26.70 | 0.30 | After |
| REGRESSION.HCC1395_tumor.L001 | 110 | Cycle | Base Insertion | 35170 | 2.72 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 110 | Cycle | Base Deletion | 35170 | 2.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 111 | Cycle | Base Substitution | 35445 | 69.04 | 27.00 | 26.78 | 0.22 | After |
| REGRESSION.HCC1395_tumor.L001 | 111 | Cycle | Base Insertion | 35092 | 3.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 111 | Cycle | Base Deletion | 35092 | 2.48 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 112 | Cycle | Base Substitution | 35462 | 75.74 | 27.00 | 26.71 | 0.29 | After |
| REGRESSION.HCC1395_tumor.L001 | 112 | Cycle | Base Insertion | 35120 | 2.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 112 | Cycle | Base Deletion | 35120 | 2.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 113 | Cycle | Base Substitution | 35429 | 78.66 | 26.00 | 26.77 | -0.77 | After |
| REGRESSION.HCC1395_tumor.L001 | 113 | Cycle | Base Insertion | 35075 | 2.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 113 | Cycle | Base Deletion | 35075 | 1.95 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 114 | Cycle | Base Substitution | 35128 | 70.96 | 27.00 | 26.74 | 0.26 | After |
| REGRESSION.HCC1395_tumor.L001 | 114 | Cycle | Base Insertion | 34807 | 1.94 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 114 | Cycle | Base Deletion | 34807 | 2.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 115 | Cycle | Base Substitution | 35225 | 72.20 | 27.00 | 26.64 | 0.36 | After |
| REGRESSION.HCC1395_tumor.L001 | 115 | Cycle | Base Insertion | 34892 | 2.21 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 115 | Cycle | Base Deletion | 34892 | 2.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 116 | Cycle | Base Substitution | 35049 | 59.98 | 27.00 | 26.69 | 0.31 | After |
| REGRESSION.HCC1395_tumor.L001 | 116 | Cycle | Base Insertion | 34694 | 2.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 116 | Cycle | Base Deletion | 34694 | 2.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 117 | Cycle | Base Substitution | 34923 | 78.72 | 26.00 | 26.76 | -0.76 | After |
| REGRESSION.HCC1395_tumor.L001 | 117 | Cycle | Base Insertion | 34564 | 2.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 117 | Cycle | Base Deletion | 34564 | 3.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 118 | Cycle | Base Substitution | 34872 | 68.81 | 27.00 | 26.74 | 0.26 | After |
| REGRESSION.HCC1395_tumor.L001 | 118 | Cycle | Base Insertion | 34503 | 2.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 118 | Cycle | Base Deletion | 34503 | 3.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 119 | Cycle | Base Substitution | 34799 | 70.43 | 27.00 | 26.70 | 0.30 | After |
| REGRESSION.HCC1395_tumor.L001 | 119 | Cycle | Base Insertion | 34429 | 1.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 119 | Cycle | Base Deletion | 34429 | 2.46 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 12 | Cycle | Base Substitution | 38791 | 39.21 | 29.00 | 27.58 | 1.42 | After |
| REGRESSION.HCC1395_tumor.L001 | 12 | Cycle | Base Insertion | 38791 | 1.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 12 | Cycle | Base Deletion | 38791 | 2.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 120 | Cycle | Base Substitution | 34780 | 81.47 | 26.00 | 26.33 | -0.33 | After |
| REGRESSION.HCC1395_tumor.L001 | 120 | Cycle | Base Insertion | 34425 | 1.77 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 120 | Cycle | Base Deletion | 34425 | 2.77 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 121 | Cycle | Base Substitution | 34632 | 67.90 | 27.00 | 26.57 | 0.43 | After |
| REGRESSION.HCC1395_tumor.L001 | 121 | Cycle | Base Insertion | 34302 | 1.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 121 | Cycle | Base Deletion | 34302 | 2.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 122 | Cycle | Base Substitution | 34538 | 66.65 | 27.00 | 26.51 | 0.49 | After |
| REGRESSION.HCC1395_tumor.L001 | 122 | Cycle | Base Insertion | 34194 | 1.72 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 122 | Cycle | Base Deletion | 34194 | 2.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 123 | Cycle | Base Substitution | 34550 | 65.46 | 27.00 | 26.69 | 0.31 | After |
| REGRESSION.HCC1395_tumor.L001 | 123 | Cycle | Base Insertion | 34176 | 0.94 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 123 | Cycle | Base Deletion | 34176 | 2.77 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 124 | Cycle | Base Substitution | 34436 | 58.56 | 27.00 | 26.69 | 0.31 | After |
| REGRESSION.HCC1395_tumor.L001 | 124 | Cycle | Base Insertion | 34048 | 0.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 124 | Cycle | Base Deletion | 34048 | 2.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 125 | Cycle | Base Substitution | 34307 | 68.52 | 27.00 | 26.45 | 0.55 | After |
| REGRESSION.HCC1395_tumor.L001 | 125 | Cycle | Base Insertion | 33926 | 0.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 125 | Cycle | Base Deletion | 33926 | 3.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 126 | Cycle | Base Substitution | 34095 | 71.50 | 27.00 | 26.63 | 0.37 | After |
| REGRESSION.HCC1395_tumor.L001 | 126 | Cycle | Base Insertion | 33713 | 0.96 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 126 | Cycle | Base Deletion | 33713 | 2.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 127 | Cycle | Base Substitution | 34098 | 56.20 | 27.00 | 26.75 | 0.25 | After |
| REGRESSION.HCC1395_tumor.L001 | 127 | Cycle | Base Insertion | 33721 | 1.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 127 | Cycle | Base Deletion | 33721 | 2.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 128 | Cycle | Base Substitution | 34019 | 82.39 | 26.00 | 26.61 | -0.61 | After |
| REGRESSION.HCC1395_tumor.L001 | 128 | Cycle | Base Insertion | 33628 | 1.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 128 | Cycle | Base Deletion | 33628 | 2.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 129 | Cycle | Base Substitution | 33992 | 63.21 | 27.00 | 26.72 | 0.28 | After |
| REGRESSION.HCC1395_tumor.L001 | 129 | Cycle | Base Insertion | 33629 | 0.95 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 129 | Cycle | Base Deletion | 33629 | 3.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 13 | Cycle | Base Substitution | 38776 | 40.01 | 29.00 | 27.72 | 1.28 | After |
| REGRESSION.HCC1395_tumor.L001 | 13 | Cycle | Base Insertion | 38776 | 2.42 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 13 | Cycle | Base Deletion | 38776 | 2.99 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 130 | Cycle | Base Substitution | 33752 | 70.27 | 27.00 | 26.69 | 0.31 | After |
| REGRESSION.HCC1395_tumor.L001 | 130 | Cycle | Base Insertion | 33369 | 1.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 130 | Cycle | Base Deletion | 33369 | 3.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 131 | Cycle | Base Substitution | 33669 | 64.68 | 27.00 | 26.82 | 0.18 | After |
| REGRESSION.HCC1395_tumor.L001 | 131 | Cycle | Base Insertion | 33282 | 0.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 131 | Cycle | Base Deletion | 33282 | 3.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 132 | Cycle | Base Substitution | 33566 | 65.25 | 27.00 | 26.51 | 0.49 | After |
| REGRESSION.HCC1395_tumor.L001 | 132 | Cycle | Base Insertion | 33168 | 0.46 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 132 | Cycle | Base Deletion | 33168 | 2.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 133 | Cycle | Base Substitution | 33553 | 78.23 | 26.00 | 26.65 | -0.65 | After |
| REGRESSION.HCC1395_tumor.L001 | 133 | Cycle | Base Insertion | 33170 | 0.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 133 | Cycle | Base Deletion | 33170 | 2.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 134 | Cycle | Base Substitution | 33483 | 75.20 | 26.00 | 26.49 | -0.49 | After |
| REGRESSION.HCC1395_tumor.L001 | 134 | Cycle | Base Insertion | 33093 | 0.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 134 | Cycle | Base Deletion | 33093 | 1.85 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 135 | Cycle | Base Substitution | 33302 | 73.97 | 26.00 | 26.65 | -0.65 | After |
| REGRESSION.HCC1395_tumor.L001 | 135 | Cycle | Base Insertion | 32903 | 1.95 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 135 | Cycle | Base Deletion | 32903 | 1.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 136 | Cycle | Base Substitution | 33175 | 48.21 | 28.00 | 26.67 | 1.33 | After |
| REGRESSION.HCC1395_tumor.L001 | 136 | Cycle | Base Insertion | 32765 | 1.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 136 | Cycle | Base Deletion | 32765 | 2.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 137 | Cycle | Base Substitution | 33201 | 65.71 | 27.00 | 26.59 | 0.41 | After |
| REGRESSION.HCC1395_tumor.L001 | 137 | Cycle | Base Insertion | 32792 | 0.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 137 | Cycle | Base Deletion | 32792 | 2.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 138 | Cycle | Base Substitution | 33016 | 71.33 | 27.00 | 26.76 | 0.24 | After |
| REGRESSION.HCC1395_tumor.L001 | 138 | Cycle | Base Insertion | 32566 | 0.94 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 138 | Cycle | Base Deletion | 32566 | 2.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 139 | Cycle | Base Substitution | 32902 | 73.29 | 26.00 | 26.65 | -0.65 | After |
| REGRESSION.HCC1395_tumor.L001 | 139 | Cycle | Base Insertion | 32457 | 1.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 139 | Cycle | Base Deletion | 32457 | 2.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 14 | Cycle | Base Substitution | 38749 | 44.09 | 29.00 | 28.09 | 0.91 | After |
| REGRESSION.HCC1395_tumor.L001 | 14 | Cycle | Base Insertion | 38749 | 1.42 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 14 | Cycle | Base Deletion | 38749 | 3.82 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 140 | Cycle | Base Substitution | 32775 | 64.28 | 27.00 | 26.34 | 0.66 | After |
| REGRESSION.HCC1395_tumor.L001 | 140 | Cycle | Base Insertion | 32321 | 0.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 140 | Cycle | Base Deletion | 32321 | 2.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 141 | Cycle | Base Substitution | 32802 | 52.45 | 28.00 | 27.01 | 0.99 | After |
| REGRESSION.HCC1395_tumor.L001 | 141 | Cycle | Base Insertion | 32346 | 0.47 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 141 | Cycle | Base Deletion | 32346 | 2.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 142 | Cycle | Base Substitution | 32497 | 78.43 | 26.00 | 26.38 | -0.38 | After |
| REGRESSION.HCC1395_tumor.L001 | 142 | Cycle | Base Insertion | 32036 | 0.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 142 | Cycle | Base Deletion | 32036 | 2.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 143 | Cycle | Base Substitution | 32485 | 77.88 | 26.00 | 25.68 | 0.32 | After |
| REGRESSION.HCC1395_tumor.L001 | 143 | Cycle | Base Insertion | 32037 | 0.98 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 143 | Cycle | Base Deletion | 32037 | 1.99 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 144 | Cycle | Base Substitution | 32321 | 66.90 | 27.00 | 26.44 | 0.56 | After |
| REGRESSION.HCC1395_tumor.L001 | 144 | Cycle | Base Insertion | 31881 | 1.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 144 | Cycle | Base Deletion | 31881 | 1.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 145 | Cycle | Base Substitution | 32209 | 76.11 | 26.00 | 26.65 | -0.65 | After |
| REGRESSION.HCC1395_tumor.L001 | 145 | Cycle | Base Insertion | 31763 | 0.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 145 | Cycle | Base Deletion | 31763 | 1.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 146 | Cycle | Base Substitution | 32139 | 67.09 | 27.00 | 26.49 | 0.51 | After |
| REGRESSION.HCC1395_tumor.L001 | 146 | Cycle | Base Insertion | 31743 | 1.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 146 | Cycle | Base Deletion | 31743 | 0.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 147 | Cycle | Base Substitution | 32012 | 63.44 | 27.00 | 26.46 | 0.54 | After |
| REGRESSION.HCC1395_tumor.L001 | 148 | Cycle | Base Substitution | 31952 | 79.21 | 26.00 | 26.66 | -0.66 | After |
| REGRESSION.HCC1395_tumor.L001 | 149 | Cycle | Base Substitution | 31817 | 81.99 | 26.00 | 26.34 | -0.34 | After |
| REGRESSION.HCC1395_tumor.L001 | 15 | Cycle | Base Substitution | 38747 | 34.31 | 29.00 | 27.91 | 1.09 | After |
| REGRESSION.HCC1395_tumor.L001 | 15 | Cycle | Base Insertion | 38747 | 1.85 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 15 | Cycle | Base Deletion | 38747 | 3.77 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 150 | Cycle | Base Substitution | 31634 | 78.16 | 26.00 | 26.47 | -0.47 | After |
| REGRESSION.HCC1395_tumor.L001 | 16 | Cycle | Base Substitution | 38620 | 38.85 | 29.00 | 28.61 | 0.39 | After |
| REGRESSION.HCC1395_tumor.L001 | 16 | Cycle | Base Insertion | 38620 | 3.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 16 | Cycle | Base Deletion | 38620 | 4.61 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 17 | Cycle | Base Substitution | 38472 | 33.94 | 29.00 | 28.65 | 0.35 | After |
| REGRESSION.HCC1395_tumor.L001 | 17 | Cycle | Base Insertion | 38471 | 2.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 17 | Cycle | Base Deletion | 38471 | 3.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 18 | Cycle | Base Substitution | 38636 | 30.04 | 30.00 | 28.52 | 1.48 | After |
| REGRESSION.HCC1395_tumor.L001 | 18 | Cycle | Base Insertion | 38635 | 2.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 18 | Cycle | Base Deletion | 38635 | 3.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 19 | Cycle | Base Substitution | 38695 | 27.13 | 30.00 | 28.66 | 1.34 | After |
| REGRESSION.HCC1395_tumor.L001 | 19 | Cycle | Base Insertion | 38694 | 2.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 19 | Cycle | Base Deletion | 38694 | 3.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 2 | Cycle | Base Substitution | 38873 | 76.62 | 27.00 | 27.17 | -0.17 | After |
| REGRESSION.HCC1395_tumor.L001 | 20 | Cycle | Base Substitution | 38573 | 25.18 | 30.00 | 28.65 | 1.35 | After |
| REGRESSION.HCC1395_tumor.L001 | 20 | Cycle | Base Insertion | 38572 | 3.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 20 | Cycle | Base Deletion | 38572 | 4.10 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 21 | Cycle | Base Substitution | 38613 | 37.08 | 29.00 | 28.62 | 0.38 | After |
| REGRESSION.HCC1395_tumor.L001 | 21 | Cycle | Base Insertion | 38613 | 2.18 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 21 | Cycle | Base Deletion | 38613 | 4.31 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 22 | Cycle | Base Substitution | 38572 | 21.20 | 31.00 | 29.11 | 1.89 | After |
| REGRESSION.HCC1395_tumor.L001 | 22 | Cycle | Base Insertion | 38572 | 2.82 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 22 | Cycle | Base Deletion | 38572 | 4.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 23 | Cycle | Base Substitution | 38629 | 27.85 | 30.00 | 28.51 | 1.49 | After |
| REGRESSION.HCC1395_tumor.L001 | 23 | Cycle | Base Insertion | 38629 | 1.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 23 | Cycle | Base Deletion | 38629 | 5.02 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 24 | Cycle | Base Substitution | 38587 | 24.56 | 30.00 | 28.57 | 1.43 | After |
| REGRESSION.HCC1395_tumor.L001 | 24 | Cycle | Base Insertion | 38587 | 1.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 24 | Cycle | Base Deletion | 38587 | 5.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 25 | Cycle | Base Substitution | 38566 | 28.74 | 30.00 | 28.81 | 1.19 | After |
| REGRESSION.HCC1395_tumor.L001 | 25 | Cycle | Base Insertion | 38566 | 2.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 25 | Cycle | Base Deletion | 38566 | 5.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 26 | Cycle | Base Substitution | 38659 | 45.37 | 29.00 | 27.70 | 1.30 | After |
| REGRESSION.HCC1395_tumor.L001 | 26 | Cycle | Base Insertion | 38659 | 2.29 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 26 | Cycle | Base Deletion | 38659 | 4.73 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 27 | Cycle | Base Substitution | 38596 | 29.95 | 29.00 | 27.90 | 1.10 | After |
| REGRESSION.HCC1395_tumor.L001 | 27 | Cycle | Base Insertion | 38595 | 3.38 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 27 | Cycle | Base Deletion | 38595 | 3.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 28 | Cycle | Base Substitution | 38596 | 42.33 | 29.00 | 27.72 | 1.28 | After |
| REGRESSION.HCC1395_tumor.L001 | 28 | Cycle | Base Insertion | 38596 | 2.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 28 | Cycle | Base Deletion | 38596 | 3.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 29 | Cycle | Base Substitution | 38636 | 38.48 | 29.00 | 28.03 | 0.97 | After |
| REGRESSION.HCC1395_tumor.L001 | 29 | Cycle | Base Insertion | 38635 | 1.56 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 29 | Cycle | Base Deletion | 38635 | 4.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 3 | Cycle | Base Substitution | 38854 | 101.78 | 26.00 | 27.20 | -1.20 | After |
| REGRESSION.HCC1395_tumor.L001 | 30 | Cycle | Base Substitution | 38581 | 37.65 | 29.00 | 27.93 | 1.07 | After |
| REGRESSION.HCC1395_tumor.L001 | 30 | Cycle | Base Insertion | 38580 | 1.37 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 30 | Cycle | Base Deletion | 38580 | 4.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 31 | Cycle | Base Substitution | 38515 | 38.40 | 29.00 | 28.01 | 0.99 | After |
| REGRESSION.HCC1395_tumor.L001 | 31 | Cycle | Base Insertion | 38515 | 1.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 31 | Cycle | Base Deletion | 38515 | 5.07 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 32 | Cycle | Base Substitution | 38539 | 50.94 | 28.00 | 27.67 | 0.33 | After |
| REGRESSION.HCC1395_tumor.L001 | 32 | Cycle | Base Insertion | 38537 | 2.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 32 | Cycle | Base Deletion | 38537 | 4.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 33 | Cycle | Base Substitution | 38337 | 48.89 | 28.00 | 27.78 | 0.22 | After |
| REGRESSION.HCC1395_tumor.L001 | 33 | Cycle | Base Insertion | 38335 | 1.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 33 | Cycle | Base Deletion | 38335 | 3.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 34 | Cycle | Base Substitution | 38514 | 56.09 | 28.00 | 27.75 | 0.25 | After |
| REGRESSION.HCC1395_tumor.L001 | 34 | Cycle | Base Insertion | 38512 | 2.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 34 | Cycle | Base Deletion | 38512 | 3.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 35 | Cycle | Base Substitution | 38478 | 47.48 | 28.00 | 27.77 | 0.23 | After |
| REGRESSION.HCC1395_tumor.L001 | 35 | Cycle | Base Insertion | 38474 | 2.02 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 35 | Cycle | Base Deletion | 38474 | 3.47 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 36 | Cycle | Base Substitution | 38560 | 49.63 | 28.00 | 27.78 | 0.22 | After |
| REGRESSION.HCC1395_tumor.L001 | 36 | Cycle | Base Insertion | 38554 | 2.81 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 36 | Cycle | Base Deletion | 38554 | 4.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 37 | Cycle | Base Substitution | 38415 | 40.82 | 29.00 | 28.08 | 0.92 | After |
| REGRESSION.HCC1395_tumor.L001 | 37 | Cycle | Base Insertion | 38407 | 1.85 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 37 | Cycle | Base Deletion | 38407 | 4.42 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 38 | Cycle | Base Substitution | 38553 | 45.23 | 29.00 | 28.04 | 0.96 | After |
| REGRESSION.HCC1395_tumor.L001 | 38 | Cycle | Base Insertion | 38541 | 2.51 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 38 | Cycle | Base Deletion | 38541 | 4.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 39 | Cycle | Base Substitution | 38489 | 33.66 | 29.00 | 28.15 | 0.85 | After |
| REGRESSION.HCC1395_tumor.L001 | 39 | Cycle | Base Insertion | 38480 | 3.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 39 | Cycle | Base Deletion | 38480 | 4.10 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 4 | Cycle | Base Substitution | 38801 | 77.33 | 27.00 | 27.15 | -0.15 | After |
| REGRESSION.HCC1395_tumor.L001 | 40 | Cycle | Base Substitution | 38570 | 40.83 | 29.00 | 28.12 | 0.88 | After |
| REGRESSION.HCC1395_tumor.L001 | 40 | Cycle | Base Insertion | 38564 | 2.94 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 40 | Cycle | Base Deletion | 38564 | 3.98 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 41 | Cycle | Base Substitution | 38482 | 56.65 | 28.00 | 27.69 | 0.31 | After |
| REGRESSION.HCC1395_tumor.L001 | 41 | Cycle | Base Insertion | 38476 | 4.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 41 | Cycle | Base Deletion | 38476 | 4.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 42 | Cycle | Base Substitution | 38386 | 53.49 | 28.00 | 27.79 | 0.21 | After |
| REGRESSION.HCC1395_tumor.L001 | 42 | Cycle | Base Insertion | 38382 | 1.79 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 42 | Cycle | Base Deletion | 38382 | 4.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 43 | Cycle | Base Substitution | 38368 | 40.38 | 29.00 | 28.08 | 0.92 | After |
| REGRESSION.HCC1395_tumor.L001 | 43 | Cycle | Base Insertion | 38361 | 1.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 43 | Cycle | Base Deletion | 38361 | 3.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 44 | Cycle | Base Substitution | 38529 | 42.17 | 29.00 | 28.33 | 0.67 | After |
| REGRESSION.HCC1395_tumor.L001 | 44 | Cycle | Base Insertion | 38519 | 2.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 44 | Cycle | Base Deletion | 38519 | 4.36 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 45 | Cycle | Base Substitution | 38259 | 40.07 | 29.00 | 27.87 | 1.13 | After |
| REGRESSION.HCC1395_tumor.L001 | 45 | Cycle | Base Insertion | 38249 | 3.47 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 45 | Cycle | Base Deletion | 38249 | 4.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 46 | Cycle | Base Substitution | 38340 | 39.34 | 29.00 | 27.87 | 1.13 | After |
| REGRESSION.HCC1395_tumor.L001 | 46 | Cycle | Base Insertion | 38328 | 2.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 46 | Cycle | Base Deletion | 38328 | 3.98 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 47 | Cycle | Base Substitution | 38307 | 49.39 | 29.00 | 28.08 | 0.92 | After |
| REGRESSION.HCC1395_tumor.L001 | 47 | Cycle | Base Insertion | 38298 | 1.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 47 | Cycle | Base Deletion | 38298 | 4.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 48 | Cycle | Base Substitution | 38379 | 44.45 | 29.00 | 28.01 | 0.99 | After |
| REGRESSION.HCC1395_tumor.L001 | 48 | Cycle | Base Insertion | 38365 | 2.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 48 | Cycle | Base Deletion | 38365 | 3.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 49 | Cycle | Base Substitution | 38412 | 38.25 | 29.00 | 28.14 | 0.86 | After |
| REGRESSION.HCC1395_tumor.L001 | 49 | Cycle | Base Insertion | 38395 | 2.31 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 49 | Cycle | Base Deletion | 38395 | 3.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 5 | Cycle | Base Substitution | 38749 | 52.16 | 28.00 | 27.76 | 0.24 | After |
| REGRESSION.HCC1395_tumor.L001 | 5 | Cycle | Base Insertion | 38749 | 0.98 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 5 | Cycle | Base Deletion | 38749 | 0.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 50 | Cycle | Base Substitution | 38275 | 48.43 | 28.00 | 27.76 | 0.24 | After |
| REGRESSION.HCC1395_tumor.L001 | 50 | Cycle | Base Insertion | 38249 | 3.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 50 | Cycle | Base Deletion | 38249 | 2.99 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 51 | Cycle | Base Substitution | 38283 | 53.96 | 28.00 | 27.76 | 0.24 | After |
| REGRESSION.HCC1395_tumor.L001 | 51 | Cycle | Base Insertion | 38259 | 2.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 51 | Cycle | Base Deletion | 38259 | 3.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 52 | Cycle | Base Substitution | 38306 | 46.21 | 28.00 | 27.60 | 0.40 | After |
| REGRESSION.HCC1395_tumor.L001 | 52 | Cycle | Base Insertion | 38284 | 2.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 52 | Cycle | Base Deletion | 38284 | 3.46 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 53 | Cycle | Base Substitution | 38311 | 46.54 | 28.00 | 27.69 | 0.31 | After |
| REGRESSION.HCC1395_tumor.L001 | 53 | Cycle | Base Insertion | 38288 | 2.37 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 53 | Cycle | Base Deletion | 38288 | 3.48 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 54 | Cycle | Base Substitution | 38198 | 46.46 | 28.00 | 27.71 | 0.29 | After |
| REGRESSION.HCC1395_tumor.L001 | 54 | Cycle | Base Insertion | 38173 | 1.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 54 | Cycle | Base Deletion | 38173 | 4.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 55 | Cycle | Base Substitution | 38273 | 41.89 | 29.00 | 27.86 | 1.14 | After |
| REGRESSION.HCC1395_tumor.L001 | 55 | Cycle | Base Insertion | 38244 | 2.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 55 | Cycle | Base Deletion | 38244 | 4.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 56 | Cycle | Base Substitution | 38194 | 50.41 | 28.00 | 27.69 | 0.31 | After |
| REGRESSION.HCC1395_tumor.L001 | 56 | Cycle | Base Insertion | 38156 | 1.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 56 | Cycle | Base Deletion | 38156 | 4.18 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 57 | Cycle | Base Substitution | 38268 | 76.84 | 27.00 | 27.50 | -0.50 | After |
| REGRESSION.HCC1395_tumor.L001 | 57 | Cycle | Base Insertion | 38220 | 0.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 57 | Cycle | Base Deletion | 38220 | 5.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 58 | Cycle | Base Substitution | 38200 | 43.13 | 29.00 | 27.60 | 1.40 | After |
| REGRESSION.HCC1395_tumor.L001 | 58 | Cycle | Base Insertion | 38149 | 2.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 58 | Cycle | Base Deletion | 38149 | 5.64 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 59 | Cycle | Base Substitution | 38215 | 42.71 | 29.00 | 28.06 | 0.94 | After |
| REGRESSION.HCC1395_tumor.L001 | 59 | Cycle | Base Insertion | 38147 | 2.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 59 | Cycle | Base Deletion | 38147 | 5.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 6 | Cycle | Base Substitution | 38770 | 59.83 | 28.00 | 27.59 | 0.41 | After |
| REGRESSION.HCC1395_tumor.L001 | 6 | Cycle | Base Insertion | 38770 | 1.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 6 | Cycle | Base Deletion | 38770 | 0.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 60 | Cycle | Base Substitution | 38150 | 54.72 | 28.00 | 27.62 | 0.38 | After |
| REGRESSION.HCC1395_tumor.L001 | 60 | Cycle | Base Insertion | 38087 | 2.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 60 | Cycle | Base Deletion | 38087 | 5.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 61 | Cycle | Base Substitution | 38194 | 52.34 | 28.00 | 27.56 | 0.44 | After |
| REGRESSION.HCC1395_tumor.L001 | 61 | Cycle | Base Insertion | 38128 | 1.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 61 | Cycle | Base Deletion | 38128 | 5.46 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 62 | Cycle | Base Substitution | 38201 | 49.48 | 28.00 | 27.65 | 0.35 | After |
| REGRESSION.HCC1395_tumor.L001 | 62 | Cycle | Base Insertion | 38131 | 1.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 62 | Cycle | Base Deletion | 38131 | 4.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 63 | Cycle | Base Substitution | 38114 | 65.72 | 28.00 | 27.55 | 0.45 | After |
| REGRESSION.HCC1395_tumor.L001 | 63 | Cycle | Base Insertion | 38040 | 0.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 63 | Cycle | Base Deletion | 38040 | 4.38 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 64 | Cycle | Base Substitution | 38143 | 42.35 | 29.00 | 27.50 | 1.50 | After |
| REGRESSION.HCC1395_tumor.L001 | 64 | Cycle | Base Insertion | 38056 | 1.61 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 64 | Cycle | Base Deletion | 38056 | 4.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 65 | Cycle | Base Substitution | 37975 | 49.66 | 28.00 | 27.63 | 0.37 | After |
| REGRESSION.HCC1395_tumor.L001 | 65 | Cycle | Base Insertion | 37892 | 3.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 65 | Cycle | Base Deletion | 37892 | 4.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 66 | Cycle | Base Substitution | 37893 | 60.44 | 28.00 | 27.50 | 0.50 | After |
| REGRESSION.HCC1395_tumor.L001 | 66 | Cycle | Base Insertion | 37797 | 2.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 66 | Cycle | Base Deletion | 37797 | 4.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 67 | Cycle | Base Substitution | 38073 | 52.29 | 28.00 | 27.60 | 0.40 | After |
| REGRESSION.HCC1395_tumor.L001 | 67 | Cycle | Base Insertion | 37970 | 1.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 67 | Cycle | Base Deletion | 37970 | 3.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 68 | Cycle | Base Substitution | 38023 | 60.28 | 28.00 | 27.82 | 0.18 | After |
| REGRESSION.HCC1395_tumor.L001 | 68 | Cycle | Base Insertion | 37913 | 1.94 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 68 | Cycle | Base Deletion | 37913 | 3.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 69 | Cycle | Base Substitution | 37914 | 47.06 | 28.00 | 27.68 | 0.32 | After |
| REGRESSION.HCC1395_tumor.L001 | 69 | Cycle | Base Insertion | 37793 | 1.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 69 | Cycle | Base Deletion | 37793 | 4.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 7 | Cycle | Base Substitution | 38813 | 46.03 | 29.00 | 28.09 | 0.91 | After |
| REGRESSION.HCC1395_tumor.L001 | 7 | Cycle | Base Insertion | 38813 | 2.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 7 | Cycle | Base Deletion | 38813 | 1.10 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 70 | Cycle | Base Substitution | 38007 | 53.03 | 28.00 | 27.84 | 0.16 | After |
| REGRESSION.HCC1395_tumor.L001 | 70 | Cycle | Base Insertion | 37894 | 1.79 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 70 | Cycle | Base Deletion | 37894 | 3.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 71 | Cycle | Base Substitution | 37776 | 48.01 | 28.00 | 27.65 | 0.35 | After |
| REGRESSION.HCC1395_tumor.L001 | 71 | Cycle | Base Insertion | 37659 | 1.98 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 71 | Cycle | Base Deletion | 37659 | 2.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 72 | Cycle | Base Substitution | 37726 | 56.07 | 28.00 | 27.55 | 0.45 | After |
| REGRESSION.HCC1395_tumor.L001 | 72 | Cycle | Base Insertion | 37606 | 3.85 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 72 | Cycle | Base Deletion | 37606 | 2.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 73 | Cycle | Base Substitution | 37838 | 71.89 | 27.00 | 27.15 | -0.15 | After |
| REGRESSION.HCC1395_tumor.L001 | 73 | Cycle | Base Insertion | 37704 | 1.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 73 | Cycle | Base Deletion | 37704 | 3.07 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 74 | Cycle | Base Substitution | 37736 | 55.60 | 28.00 | 27.50 | 0.50 | After |
| REGRESSION.HCC1395_tumor.L001 | 74 | Cycle | Base Insertion | 37600 | 1.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 74 | Cycle | Base Deletion | 37600 | 3.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 75 | Cycle | Base Substitution | 37755 | 60.77 | 28.00 | 27.37 | 0.63 | After |
| REGRESSION.HCC1395_tumor.L001 | 75 | Cycle | Base Insertion | 37608 | 1.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 75 | Cycle | Base Deletion | 37608 | 3.44 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 76 | Cycle | Base Substitution | 37781 | 49.52 | 28.00 | 27.39 | 0.61 | After |
| REGRESSION.HCC1395_tumor.L001 | 76 | Cycle | Base Insertion | 37623 | 1.55 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 76 | Cycle | Base Deletion | 37623 | 3.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 77 | Cycle | Base Substitution | 37702 | 63.92 | 28.00 | 27.12 | 0.88 | After |
| REGRESSION.HCC1395_tumor.L001 | 77 | Cycle | Base Insertion | 37550 | 1.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 77 | Cycle | Base Deletion | 37550 | 3.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 78 | Cycle | Base Substitution | 37477 | 49.91 | 28.00 | 27.36 | 0.64 | After |
| REGRESSION.HCC1395_tumor.L001 | 78 | Cycle | Base Insertion | 37307 | 1.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 78 | Cycle | Base Deletion | 37307 | 3.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 79 | Cycle | Base Substitution | 37426 | 68.38 | 27.00 | 27.10 | -0.10 | After |
| REGRESSION.HCC1395_tumor.L001 | 79 | Cycle | Base Insertion | 37240 | 1.57 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 79 | Cycle | Base Deletion | 37240 | 4.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 8 | Cycle | Base Substitution | 38817 | 43.60 | 29.00 | 27.78 | 1.22 | After |
| REGRESSION.HCC1395_tumor.L001 | 8 | Cycle | Base Insertion | 38817 | 1.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 8 | Cycle | Base Deletion | 38817 | 1.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 80 | Cycle | Base Substitution | 37508 | 58.21 | 28.00 | 27.41 | 0.59 | After |
| REGRESSION.HCC1395_tumor.L001 | 80 | Cycle | Base Insertion | 37326 | 1.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 80 | Cycle | Base Deletion | 37326 | 3.84 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 81 | Cycle | Base Substitution | 37473 | 67.59 | 27.00 | 27.33 | -0.33 | After |
| REGRESSION.HCC1395_tumor.L001 | 81 | Cycle | Base Insertion | 37279 | 2.47 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 81 | Cycle | Base Deletion | 37279 | 4.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 82 | Cycle | Base Substitution | 37411 | 57.24 | 28.00 | 27.07 | 0.93 | After |
| REGRESSION.HCC1395_tumor.L001 | 82 | Cycle | Base Insertion | 37209 | 1.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 82 | Cycle | Base Deletion | 37209 | 3.64 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 83 | Cycle | Base Substitution | 37421 | 77.45 | 27.00 | 27.03 | -0.03 | After |
| REGRESSION.HCC1395_tumor.L001 | 83 | Cycle | Base Insertion | 37227 | 1.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 83 | Cycle | Base Deletion | 37227 | 4.21 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 84 | Cycle | Base Substitution | 37264 | 70.91 | 27.00 | 27.58 | -0.58 | After |
| REGRESSION.HCC1395_tumor.L001 | 84 | Cycle | Base Insertion | 37044 | 1.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 84 | Cycle | Base Deletion | 37044 | 3.86 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 85 | Cycle | Base Substitution | 37313 | 56.52 | 28.00 | 27.25 | 0.75 | After |
| REGRESSION.HCC1395_tumor.L001 | 85 | Cycle | Base Insertion | 37085 | 1.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 85 | Cycle | Base Deletion | 37085 | 3.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 86 | Cycle | Base Substitution | 37088 | 63.02 | 28.00 | 27.44 | 0.56 | After |
| REGRESSION.HCC1395_tumor.L001 | 86 | Cycle | Base Insertion | 36876 | 1.42 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 86 | Cycle | Base Deletion | 36876 | 3.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 87 | Cycle | Base Substitution | 37133 | 57.19 | 28.00 | 27.14 | 0.86 | After |
| REGRESSION.HCC1395_tumor.L001 | 87 | Cycle | Base Insertion | 36916 | 1.95 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 87 | Cycle | Base Deletion | 36916 | 4.30 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 88 | Cycle | Base Substitution | 37080 | 63.96 | 28.00 | 27.11 | 0.89 | After |
| REGRESSION.HCC1395_tumor.L001 | 88 | Cycle | Base Insertion | 36863 | 1.47 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 88 | Cycle | Base Deletion | 36863 | 3.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 89 | Cycle | Base Substitution | 37146 | 59.25 | 28.00 | 27.13 | 0.87 | After |
| REGRESSION.HCC1395_tumor.L001 | 89 | Cycle | Base Insertion | 36931 | 2.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 89 | Cycle | Base Deletion | 36931 | 3.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 9 | Cycle | Base Substitution | 38834 | 37.41 | 29.00 | 27.57 | 1.43 | After |
| REGRESSION.HCC1395_tumor.L001 | 9 | Cycle | Base Insertion | 38834 | 1.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 9 | Cycle | Base Deletion | 38834 | 2.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 90 | Cycle | Base Substitution | 37086 | 67.49 | 27.00 | 27.38 | -0.38 | After |
| REGRESSION.HCC1395_tumor.L001 | 90 | Cycle | Base Insertion | 36849 | 1.29 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 90 | Cycle | Base Deletion | 36849 | 3.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 91 | Cycle | Base Substitution | 37010 | 60.69 | 27.00 | 26.96 | 0.04 | After |
| REGRESSION.HCC1395_tumor.L001 | 91 | Cycle | Base Insertion | 36790 | 1.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 91 | Cycle | Base Deletion | 36790 | 3.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 92 | Cycle | Base Substitution | 37007 | 77.11 | 27.00 | 26.86 | 0.14 | After |
| REGRESSION.HCC1395_tumor.L001 | 92 | Cycle | Base Insertion | 36752 | 1.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 92 | Cycle | Base Deletion | 36752 | 3.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 93 | Cycle | Base Substitution | 36784 | 63.95 | 28.00 | 27.34 | 0.66 | After |
| REGRESSION.HCC1395_tumor.L001 | 93 | Cycle | Base Insertion | 36511 | 3.02 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 93 | Cycle | Base Deletion | 36511 | 2.47 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 94 | Cycle | Base Substitution | 36841 | 66.75 | 27.00 | 26.81 | 0.19 | After |
| REGRESSION.HCC1395_tumor.L001 | 94 | Cycle | Base Insertion | 36571 | 0.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 94 | Cycle | Base Deletion | 36571 | 2.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 95 | Cycle | Base Substitution | 36769 | 68.47 | 27.00 | 26.87 | 0.13 | After |
| REGRESSION.HCC1395_tumor.L001 | 95 | Cycle | Base Insertion | 36473 | 1.21 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 95 | Cycle | Base Deletion | 36473 | 2.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 96 | Cycle | Base Substitution | 36718 | 72.05 | 27.00 | 27.14 | -0.14 | After |
| REGRESSION.HCC1395_tumor.L001 | 96 | Cycle | Base Insertion | 36420 | 2.21 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 96 | Cycle | Base Deletion | 36420 | 3.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 97 | Cycle | Base Substitution | 36650 | 76.24 | 27.00 | 26.77 | 0.23 | After |
| REGRESSION.HCC1395_tumor.L001 | 97 | Cycle | Base Insertion | 36364 | 1.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 97 | Cycle | Base Deletion | 36364 | 4.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 98 | Cycle | Base Substitution | 36395 | 73.00 | 27.00 | 27.31 | -0.31 | After |
| REGRESSION.HCC1395_tumor.L001 | 98 | Cycle | Base Insertion | 36114 | 1.07 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 98 | Cycle | Base Deletion | 36114 | 2.86 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 99 | Cycle | Base Substitution | 36408 | 67.67 | 27.00 | 27.06 | -0.06 | After |
| REGRESSION.HCC1395_tumor.L001 | 99 | Cycle | Base Insertion | 36139 | 1.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 99 | Cycle | Base Deletion | 36139 | 3.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 10 | QualityScore | Base Substitution | 26555 | 2836.37 | 10.00 | 10.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 11 | QualityScore | Base Substitution | 15225 | 1109.27 | 11.00 | 11.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 12 | QualityScore | Base Substitution | 11993 | 713.08 | 12.00 | 12.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 13 | QualityScore | Base Substitution | 21105 | 745.76 | 14.00 | 13.00 | 1.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 14 | QualityScore | Base Substitution | 13057 | 218.95 | 17.00 | 14.00 | 3.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 15 | QualityScore | Base Substitution | 17147 | 13.56 | 21.00 | 15.00 | 6.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 16 | QualityScore | Base Substitution | 8151 | 0.78 | 20.00 | 16.00 | 4.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 17 | QualityScore | Base Substitution | 14266 | 1.31 | 22.00 | 17.00 | 5.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 21 | QualityScore | Base Substitution | 103 | 0.00 | 21.00 | 21.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 22 | QualityScore | Base Substitution | 30748 | 237.81 | 21.00 | 22.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 23 | QualityScore | Base Substitution | 48724 | 344.64 | 22.00 | 23.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 24 | QualityScore | Base Substitution | 161341 | 616.09 | 24.00 | 24.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 25 | QualityScore | Base Substitution | 99739 | 139.82 | 27.00 | 25.00 | 2.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 28 | QualityScore | Base Substitution | 7684 | 3.01 | 28.00 | 28.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 29 | QualityScore | Base Substitution | 68671 | 123.89 | 28.00 | 29.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 30 | QualityScore | Base Substitution | 2455404 | 1523.11 | 32.00 | 30.00 | 2.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 31 | QualityScore | Base Substitution | 2856956 | 1261.43 | 33.00 | 31.00 | 2.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 32 | QualityScore | Base Substitution | 4614006 | 1139.33 | 36.00 | 32.00 | 4.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 33 | QualityScore | Base Substitution | 461492 | 75.22 | 36.00 | 33.00 | 3.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 45 | QualityScore | Base Insertion | 10985398 | 478.23 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 45 | QualityScore | Base Deletion | 10985398 | 951.29 | 41.00 | 45.00 | -4.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 8 | QualityScore | Base Substitution | 1115 | 207.43 | 7.00 | 8.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L001 | 9 | QualityScore | Base Substitution | 51916 | 7407.37 | 8.00 | 9.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L002 | AA | Context | Base Substitution | 848041 | 1916.51 | 26.00 | 25.42 | 0.58 | After |
| REGRESSION.HCC1395_tumor.L002 | AAA | Context | Base Insertion | 301473 | 70.15 | 42.00 | 45.00 | -3.00 | After |
| REGRESSION.HCC1395_tumor.L002 | AAA | Context | Base Deletion | 301473 | 221.20 | 36.00 | 45.00 | -9.00 | After |
| REGRESSION.HCC1395_tumor.L002 | AAC | Context | Base Insertion | 134207 | 3.51 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | AAC | Context | Base Deletion | 134207 | 7.38 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | AAG | Context | Base Insertion | 201448 | 7.30 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | AAG | Context | Base Deletion | 201448 | 8.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | AAT | Context | Base Insertion | 176369 | 3.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | AAT | Context | Base Deletion | 176369 | 13.96 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L002 | AC | Context | Base Substitution | 537987 | 1895.97 | 25.00 | 24.69 | 0.31 | After |
| REGRESSION.HCC1395_tumor.L002 | ACA | Context | Base Insertion | 207264 | 20.92 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L002 | ACA | Context | Base Deletion | 207264 | 39.49 | 43.00 | 45.00 | -2.00 | After |
| REGRESSION.HCC1395_tumor.L002 | ACC | Context | Base Insertion | 148801 | 6.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | ACC | Context | Base Deletion | 148801 | 6.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | ACG | Context | Base Insertion | 31111 | 1.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | ACG | Context | Base Deletion | 31111 | 3.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | ACT | Context | Base Insertion | 159919 | 3.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | ACT | Context | Base Deletion | 159919 | 11.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | AG | Context | Base Substitution | 813782 | 635.27 | 31.00 | 28.67 | 2.33 | After |
| REGRESSION.HCC1395_tumor.L002 | AGA | Context | Base Insertion | 226941 | 5.18 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | AGA | Context | Base Deletion | 226941 | 9.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | AGC | Context | Base Insertion | 195170 | 1.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | AGC | Context | Base Deletion | 195170 | 9.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | AGG | Context | Base Insertion | 231528 | 14.56 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | AGG | Context | Base Deletion | 231528 | 8.18 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | AGT | Context | Base Insertion | 156263 | 2.77 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | AGT | Context | Base Deletion | 156263 | 4.96 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | AT | Context | Base Substitution | 609927 | 633.00 | 30.00 | 27.55 | 2.45 | After |
| REGRESSION.HCC1395_tumor.L002 | ATA | Context | Base Insertion | 135814 | 7.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | ATA | Context | Base Deletion | 135814 | 5.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | ATC | Context | Base Insertion | 123470 | 2.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | ATC | Context | Base Deletion | 123470 | 9.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | ATG | Context | Base Insertion | 176785 | 3.26 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | ATG | Context | Base Deletion | 176785 | 1.82 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | ATT | Context | Base Insertion | 184149 | 4.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | ATT | Context | Base Deletion | 184149 | 7.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | CA | Context | Base Substitution | 869826 | 1910.06 | 27.00 | 25.73 | 1.27 | After |
| REGRESSION.HCC1395_tumor.L002 | CAA | Context | Base Insertion | 174901 | 4.88 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | CAA | Context | Base Deletion | 174901 | 14.06 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L002 | CAC | Context | Base Insertion | 186391 | 25.09 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L002 | CAC | Context | Base Deletion | 186391 | 40.64 | 43.00 | 45.00 | -2.00 | After |
| REGRESSION.HCC1395_tumor.L002 | CAG | Context | Base Insertion | 297116 | 7.57 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | CAG | Context | Base Deletion | 297116 | 8.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | CAT | Context | Base Insertion | 172507 | 8.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | CAT | Context | Base Deletion | 172507 | 5.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | CC | Context | Base Substitution | 774397 | 2404.01 | 25.00 | 24.66 | 0.34 | After |
| REGRESSION.HCC1395_tumor.L002 | CCA | Context | Base Insertion | 249658 | 6.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | CCA | Context | Base Deletion | 249658 | 7.81 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | CCC | Context | Base Insertion | 214277 | 13.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | CCC | Context | Base Deletion | 214277 | 16.21 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L002 | CCG | Context | Base Insertion | 54161 | 7.37 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | CCG | Context | Base Deletion | 54161 | 6.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | CCT | Context | Base Insertion | 246158 | 2.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | CCT | Context | Base Deletion | 246158 | 9.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | CG | Context | Base Substitution | 162384 | 564.33 | 25.00 | 24.78 | 0.22 | After |
| REGRESSION.HCC1395_tumor.L002 | CGA | Context | Base Insertion | 57146 | 2.95 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | CGA | Context | Base Deletion | 57146 | 0.61 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | CGC | Context | Base Insertion | 81402 | 1.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | CGC | Context | Base Deletion | 81402 | 8.21 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | CGG | Context | Base Insertion | 98235 | 2.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | CGG | Context | Base Deletion | 98235 | 8.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | CGT | Context | Base Insertion | 63576 | 1.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | CGT | Context | Base Deletion | 63576 | 1.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | CT | Context | Base Substitution | 851765 | 408.26 | 33.00 | 29.59 | 3.41 | After |
| REGRESSION.HCC1395_tumor.L002 | CTA | Context | Base Insertion | 97530 | 1.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | CTA | Context | Base Deletion | 97530 | 7.26 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | CTC | Context | Base Insertion | 206101 | 5.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | CTC | Context | Base Deletion | 206101 | 15.58 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L002 | CTG | Context | Base Insertion | 296330 | 2.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | CTG | Context | Base Deletion | 296330 | 13.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | CTT | Context | Base Insertion | 212659 | 6.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | CTT | Context | Base Deletion | 212659 | 9.18 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | GA | Context | Base Substitution | 713927 | 1064.41 | 28.00 | 26.50 | 1.50 | After |
| REGRESSION.HCC1395_tumor.L002 | GAA | Context | Base Insertion | 212556 | 5.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | GAA | Context | Base Deletion | 212556 | 6.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | GAC | Context | Base Insertion | 119732 | 3.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | GAC | Context | Base Deletion | 119732 | 7.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | GAG | Context | Base Insertion | 211471 | 3.84 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | GAG | Context | Base Deletion | 211471 | 7.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | GAT | Context | Base Insertion | 127342 | 1.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | GAT | Context | Base Deletion | 127342 | 4.17 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | GC | Context | Base Substitution | 671923 | 1512.44 | 26.00 | 25.90 | 0.10 | After |
| REGRESSION.HCC1395_tumor.L002 | GCA | Context | Base Insertion | 208082 | 5.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | GCA | Context | Base Deletion | 208082 | 4.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | GCC | Context | Base Insertion | 202315 | 4.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | GCC | Context | Base Deletion | 202315 | 12.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | GCG | Context | Base Insertion | 49202 | 1.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | GCG | Context | Base Deletion | 49202 | 6.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | GCT | Context | Base Insertion | 212774 | 2.84 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | GCT | Context | Base Deletion | 212774 | 5.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | GG | Context | Base Substitution | 800499 | 731.19 | 30.00 | 27.64 | 2.36 | After |
| REGRESSION.HCC1395_tumor.L002 | GGA | Context | Base Insertion | 217511 | 22.44 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L002 | GGA | Context | Base Deletion | 217511 | 14.84 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | GGC | Context | Base Insertion | 199123 | 2.26 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | GGC | Context | Base Deletion | 199123 | 6.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | GGG | Context | Base Insertion | 220547 | 9.94 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | GGG | Context | Base Deletion | 220547 | 28.25 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L002 | GGT | Context | Base Insertion | 160698 | 2.94 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | GGT | Context | Base Deletion | 160698 | 4.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | GT | Context | Base Substitution | 597475 | 1025.19 | 28.00 | 26.86 | 1.14 | After |
| REGRESSION.HCC1395_tumor.L002 | GTA | Context | Base Insertion | 102644 | 1.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | GTA | Context | Base Deletion | 102644 | 1.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | GTC | Context | Base Insertion | 128068 | 4.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | GTC | Context | Base Deletion | 128068 | 3.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | GTG | Context | Base Insertion | 202765 | 17.38 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L002 | GTG | Context | Base Deletion | 202765 | 32.77 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L002 | GTT | Context | Base Insertion | 150788 | 2.84 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | GTT | Context | Base Deletion | 150788 | 11.73 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | TA | Context | Base Substitution | 488539 | 1251.54 | 26.00 | 24.89 | 1.11 | After |
| REGRESSION.HCC1395_tumor.L002 | TAA | Context | Base Insertion | 151805 | 11.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | TAA | Context | Base Deletion | 151805 | 17.55 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L002 | TAC | Context | Base Insertion | 94219 | 2.36 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | TAC | Context | Base Deletion | 94219 | 5.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | TAG | Context | Base Insertion | 97479 | 1.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | TAG | Context | Base Deletion | 97479 | 1.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | TAT | Context | Base Insertion | 129273 | 1.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | TAT | Context | Base Deletion | 129273 | 4.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | TC | Context | Base Substitution | 657213 | 1673.66 | 26.00 | 25.43 | 0.57 | After |
| REGRESSION.HCC1395_tumor.L002 | TCA | Context | Base Insertion | 197982 | 6.99 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | TCA | Context | Base Deletion | 197982 | 11.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | TCC | Context | Base Insertion | 203964 | 28.89 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L002 | TCC | Context | Base Deletion | 203964 | 8.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | TCG | Context | Base Insertion | 26688 | 0.86 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | TCG | Context | Base Deletion | 26688 | 1.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | TCT | Context | Base Insertion | 227153 | 7.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | TCT | Context | Base Deletion | 227153 | 13.38 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | TG | Context | Base Substitution | 855324 | 369.32 | 33.00 | 29.35 | 3.65 | After |
| REGRESSION.HCC1395_tumor.L002 | TGA | Context | Base Insertion | 206978 | 2.26 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | TGA | Context | Base Deletion | 206978 | 3.72 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | TGC | Context | Base Insertion | 191893 | 3.31 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | TGC | Context | Base Deletion | 191893 | 2.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | TGG | Context | Base Insertion | 244376 | 6.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | TGG | Context | Base Deletion | 244376 | 7.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | TGT | Context | Base Insertion | 212999 | 16.48 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L002 | TGT | Context | Base Deletion | 212999 | 35.71 | 43.00 | 45.00 | -2.00 | After |
| REGRESSION.HCC1395_tumor.L002 | TT | Context | Base Substitution | 851333 | 934.74 | 30.00 | 28.23 | 1.77 | After |
| REGRESSION.HCC1395_tumor.L002 | TTA | Context | Base Insertion | 148961 | 10.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | TTA | Context | Base Deletion | 148961 | 8.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | TTC | Context | Base Insertion | 195623 | 4.09 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | TTC | Context | Base Deletion | 195623 | 9.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | TTG | Context | Base Insertion | 173403 | 3.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | TTG | Context | Base Deletion | 173403 | 5.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | TTT | Context | Base Insertion | 297961 | 64.87 | 42.00 | 45.00 | -3.00 | After |
| REGRESSION.HCC1395_tumor.L002 | TTT | Context | Base Deletion | 297961 | 156.89 | 38.00 | 45.00 | -7.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -1 | Cycle | Base Substitution | 39135 | 179.72 | 23.00 | 23.57 | -0.57 | After |
| REGRESSION.HCC1395_tumor.L002 | -10 | Cycle | Base Substitution | 39327 | 53.60 | 28.00 | 27.36 | 0.64 | After |
| REGRESSION.HCC1395_tumor.L002 | -10 | Cycle | Base Insertion | 39327 | 0.77 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -10 | Cycle | Base Deletion | 39327 | 2.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -100 | Cycle | Base Substitution | 36853 | 82.39 | 26.00 | 26.49 | -0.49 | After |
| REGRESSION.HCC1395_tumor.L002 | -100 | Cycle | Base Insertion | 36545 | 2.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -100 | Cycle | Base Deletion | 36545 | 2.95 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -101 | Cycle | Base Substitution | 36802 | 69.29 | 27.00 | 26.31 | 0.69 | After |
| REGRESSION.HCC1395_tumor.L002 | -101 | Cycle | Base Insertion | 36460 | 4.36 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -101 | Cycle | Base Deletion | 36460 | 3.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -102 | Cycle | Base Substitution | 36691 | 83.95 | 26.00 | 26.32 | -0.32 | After |
| REGRESSION.HCC1395_tumor.L002 | -102 | Cycle | Base Insertion | 36378 | 1.57 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -102 | Cycle | Base Deletion | 36378 | 2.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -103 | Cycle | Base Substitution | 36649 | 80.29 | 27.00 | 26.53 | 0.47 | After |
| REGRESSION.HCC1395_tumor.L002 | -103 | Cycle | Base Insertion | 36311 | 1.29 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -103 | Cycle | Base Deletion | 36311 | 2.48 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -104 | Cycle | Base Substitution | 36747 | 74.70 | 27.00 | 26.46 | 0.54 | After |
| REGRESSION.HCC1395_tumor.L002 | -104 | Cycle | Base Insertion | 36394 | 1.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -104 | Cycle | Base Deletion | 36394 | 3.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -105 | Cycle | Base Substitution | 36593 | 58.68 | 27.00 | 26.48 | 0.52 | After |
| REGRESSION.HCC1395_tumor.L002 | -105 | Cycle | Base Insertion | 36275 | 0.94 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -105 | Cycle | Base Deletion | 36275 | 3.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -106 | Cycle | Base Substitution | 36416 | 78.27 | 27.00 | 26.28 | 0.72 | After |
| REGRESSION.HCC1395_tumor.L002 | -106 | Cycle | Base Insertion | 36101 | 2.51 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -106 | Cycle | Base Deletion | 36101 | 3.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -107 | Cycle | Base Substitution | 36345 | 73.89 | 27.00 | 26.45 | 0.55 | After |
| REGRESSION.HCC1395_tumor.L002 | -107 | Cycle | Base Insertion | 36033 | 1.82 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -107 | Cycle | Base Deletion | 36033 | 3.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -108 | Cycle | Base Substitution | 36246 | 89.27 | 26.00 | 25.65 | 0.35 | After |
| REGRESSION.HCC1395_tumor.L002 | -108 | Cycle | Base Insertion | 35950 | 1.47 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -108 | Cycle | Base Deletion | 35950 | 3.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -109 | Cycle | Base Substitution | 36131 | 64.70 | 27.00 | 26.43 | 0.57 | After |
| REGRESSION.HCC1395_tumor.L002 | -109 | Cycle | Base Insertion | 35820 | 1.98 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -109 | Cycle | Base Deletion | 35820 | 4.26 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -11 | Cycle | Base Substitution | 39301 | 45.32 | 29.00 | 27.56 | 1.44 | After |
| REGRESSION.HCC1395_tumor.L002 | -11 | Cycle | Base Insertion | 39300 | 0.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -11 | Cycle | Base Deletion | 39300 | 2.44 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -110 | Cycle | Base Substitution | 36070 | 90.04 | 26.00 | 26.20 | -0.20 | After |
| REGRESSION.HCC1395_tumor.L002 | -110 | Cycle | Base Insertion | 35736 | 0.51 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -110 | Cycle | Base Deletion | 35736 | 4.48 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -111 | Cycle | Base Substitution | 36102 | 77.59 | 27.00 | 26.64 | 0.36 | After |
| REGRESSION.HCC1395_tumor.L002 | -111 | Cycle | Base Insertion | 35779 | 2.94 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -111 | Cycle | Base Deletion | 35779 | 4.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -112 | Cycle | Base Substitution | 35918 | 91.77 | 26.00 | 25.52 | 0.48 | After |
| REGRESSION.HCC1395_tumor.L002 | -112 | Cycle | Base Insertion | 35587 | 1.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -112 | Cycle | Base Deletion | 35587 | 3.99 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -113 | Cycle | Base Substitution | 35904 | 82.61 | 26.00 | 26.32 | -0.32 | After |
| REGRESSION.HCC1395_tumor.L002 | -113 | Cycle | Base Insertion | 35587 | 1.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -113 | Cycle | Base Deletion | 35587 | 3.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -114 | Cycle | Base Substitution | 35756 | 81.00 | 26.00 | 26.37 | -0.37 | After |
| REGRESSION.HCC1395_tumor.L002 | -114 | Cycle | Base Insertion | 35429 | 1.37 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -114 | Cycle | Base Deletion | 35429 | 2.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -115 | Cycle | Base Substitution | 35684 | 74.35 | 27.00 | 26.49 | 0.51 | After |
| REGRESSION.HCC1395_tumor.L002 | -115 | Cycle | Base Insertion | 35350 | 1.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -115 | Cycle | Base Deletion | 35350 | 3.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -116 | Cycle | Base Substitution | 35718 | 70.99 | 27.00 | 26.42 | 0.58 | After |
| REGRESSION.HCC1395_tumor.L002 | -116 | Cycle | Base Insertion | 35357 | 2.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -116 | Cycle | Base Deletion | 35357 | 4.07 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -117 | Cycle | Base Substitution | 35398 | 81.58 | 26.00 | 26.28 | -0.28 | After |
| REGRESSION.HCC1395_tumor.L002 | -117 | Cycle | Base Insertion | 35014 | 1.96 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -117 | Cycle | Base Deletion | 35014 | 3.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -118 | Cycle | Base Substitution | 35437 | 79.60 | 26.00 | 26.40 | -0.40 | After |
| REGRESSION.HCC1395_tumor.L002 | -118 | Cycle | Base Insertion | 35056 | 2.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -118 | Cycle | Base Deletion | 35056 | 2.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -119 | Cycle | Base Substitution | 35268 | 101.83 | 26.00 | 26.16 | -0.16 | After |
| REGRESSION.HCC1395_tumor.L002 | -119 | Cycle | Base Insertion | 34874 | 1.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -119 | Cycle | Base Deletion | 34874 | 2.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -12 | Cycle | Base Substitution | 39401 | 59.26 | 28.00 | 27.76 | 0.24 | After |
| REGRESSION.HCC1395_tumor.L002 | -12 | Cycle | Base Insertion | 39400 | 1.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -12 | Cycle | Base Deletion | 39400 | 3.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -120 | Cycle | Base Substitution | 35199 | 90.74 | 26.00 | 26.08 | -0.08 | After |
| REGRESSION.HCC1395_tumor.L002 | -120 | Cycle | Base Insertion | 34835 | 1.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -120 | Cycle | Base Deletion | 34835 | 3.64 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -121 | Cycle | Base Substitution | 35143 | 86.61 | 26.00 | 26.37 | -0.37 | After |
| REGRESSION.HCC1395_tumor.L002 | -121 | Cycle | Base Insertion | 34791 | 0.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -121 | Cycle | Base Deletion | 34791 | 3.46 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -122 | Cycle | Base Substitution | 35151 | 71.81 | 27.00 | 26.30 | 0.70 | After |
| REGRESSION.HCC1395_tumor.L002 | -122 | Cycle | Base Insertion | 34773 | 0.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -122 | Cycle | Base Deletion | 34773 | 2.81 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -123 | Cycle | Base Substitution | 35057 | 72.61 | 27.00 | 26.47 | 0.53 | After |
| REGRESSION.HCC1395_tumor.L002 | -123 | Cycle | Base Insertion | 34685 | 0.73 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -123 | Cycle | Base Deletion | 34685 | 2.96 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -124 | Cycle | Base Substitution | 34893 | 78.11 | 26.00 | 26.24 | -0.24 | After |
| REGRESSION.HCC1395_tumor.L002 | -124 | Cycle | Base Insertion | 34547 | 1.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -124 | Cycle | Base Deletion | 34547 | 3.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -125 | Cycle | Base Substitution | 34749 | 73.20 | 27.00 | 26.56 | 0.44 | After |
| REGRESSION.HCC1395_tumor.L002 | -125 | Cycle | Base Insertion | 34377 | 1.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -125 | Cycle | Base Deletion | 34377 | 2.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -126 | Cycle | Base Substitution | 34723 | 97.23 | 26.00 | 25.64 | 0.36 | After |
| REGRESSION.HCC1395_tumor.L002 | -126 | Cycle | Base Insertion | 34351 | 1.26 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -126 | Cycle | Base Deletion | 34351 | 2.84 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -127 | Cycle | Base Substitution | 34507 | 95.00 | 26.00 | 25.59 | 0.41 | After |
| REGRESSION.HCC1395_tumor.L002 | -127 | Cycle | Base Insertion | 34143 | 1.10 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -127 | Cycle | Base Deletion | 34143 | 3.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -128 | Cycle | Base Substitution | 34523 | 73.59 | 27.00 | 26.53 | 0.47 | After |
| REGRESSION.HCC1395_tumor.L002 | -128 | Cycle | Base Insertion | 34127 | 1.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -128 | Cycle | Base Deletion | 34127 | 3.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -129 | Cycle | Base Substitution | 34412 | 76.40 | 27.00 | 26.13 | 0.87 | After |
| REGRESSION.HCC1395_tumor.L002 | -129 | Cycle | Base Insertion | 34019 | 1.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -129 | Cycle | Base Deletion | 34019 | 3.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -13 | Cycle | Base Substitution | 39406 | 61.05 | 28.00 | 27.82 | 0.18 | After |
| REGRESSION.HCC1395_tumor.L002 | -13 | Cycle | Base Insertion | 39406 | 0.88 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -13 | Cycle | Base Deletion | 39406 | 4.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -130 | Cycle | Base Substitution | 34335 | 69.76 | 27.00 | 26.16 | 0.84 | After |
| REGRESSION.HCC1395_tumor.L002 | -130 | Cycle | Base Insertion | 33966 | 1.47 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -130 | Cycle | Base Deletion | 33966 | 2.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -131 | Cycle | Base Substitution | 34232 | 81.45 | 26.00 | 26.22 | -0.22 | After |
| REGRESSION.HCC1395_tumor.L002 | -131 | Cycle | Base Insertion | 33839 | 1.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -131 | Cycle | Base Deletion | 33839 | 1.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -132 | Cycle | Base Substitution | 34210 | 82.86 | 26.00 | 25.92 | 0.08 | After |
| REGRESSION.HCC1395_tumor.L002 | -132 | Cycle | Base Insertion | 33793 | 2.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -132 | Cycle | Base Deletion | 33793 | 1.81 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -133 | Cycle | Base Substitution | 34019 | 68.49 | 27.00 | 26.10 | 0.90 | After |
| REGRESSION.HCC1395_tumor.L002 | -133 | Cycle | Base Insertion | 33602 | 0.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -133 | Cycle | Base Deletion | 33602 | 1.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -134 | Cycle | Base Substitution | 33938 | 80.15 | 26.00 | 26.10 | -0.10 | After |
| REGRESSION.HCC1395_tumor.L002 | -134 | Cycle | Base Insertion | 33493 | 2.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -134 | Cycle | Base Deletion | 33493 | 1.95 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -135 | Cycle | Base Substitution | 33794 | 94.94 | 25.00 | 25.53 | -0.53 | After |
| REGRESSION.HCC1395_tumor.L002 | -135 | Cycle | Base Insertion | 33362 | 1.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -135 | Cycle | Base Deletion | 33362 | 2.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -136 | Cycle | Base Substitution | 33652 | 73.36 | 27.00 | 26.12 | 0.88 | After |
| REGRESSION.HCC1395_tumor.L002 | -136 | Cycle | Base Insertion | 33201 | 1.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -136 | Cycle | Base Deletion | 33201 | 2.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -137 | Cycle | Base Substitution | 33684 | 72.73 | 27.00 | 26.44 | 0.56 | After |
| REGRESSION.HCC1395_tumor.L002 | -137 | Cycle | Base Insertion | 33218 | 0.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -137 | Cycle | Base Deletion | 33218 | 1.85 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -138 | Cycle | Base Substitution | 33477 | 91.84 | 26.00 | 26.07 | -0.07 | After |
| REGRESSION.HCC1395_tumor.L002 | -138 | Cycle | Base Insertion | 33005 | 0.73 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -138 | Cycle | Base Deletion | 33005 | 2.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -139 | Cycle | Base Substitution | 33377 | 72.09 | 26.00 | 25.89 | 0.11 | After |
| REGRESSION.HCC1395_tumor.L002 | -139 | Cycle | Base Insertion | 32875 | 1.10 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -139 | Cycle | Base Deletion | 32875 | 1.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -14 | Cycle | Base Substitution | 39359 | 57.14 | 28.00 | 27.47 | 0.53 | After |
| REGRESSION.HCC1395_tumor.L002 | -14 | Cycle | Base Insertion | 39358 | 0.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -14 | Cycle | Base Deletion | 39358 | 4.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -140 | Cycle | Base Substitution | 33256 | 75.20 | 26.00 | 25.73 | 0.27 | After |
| REGRESSION.HCC1395_tumor.L002 | -140 | Cycle | Base Insertion | 32725 | 0.77 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -140 | Cycle | Base Deletion | 32725 | 1.61 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -141 | Cycle | Base Substitution | 33281 | 75.18 | 26.00 | 26.11 | -0.11 | After |
| REGRESSION.HCC1395_tumor.L002 | -141 | Cycle | Base Insertion | 32703 | 0.77 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -141 | Cycle | Base Deletion | 32703 | 0.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -142 | Cycle | Base Substitution | 33098 | 69.18 | 27.00 | 26.17 | 0.83 | After |
| REGRESSION.HCC1395_tumor.L002 | -142 | Cycle | Base Insertion | 32412 | 0.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -142 | Cycle | Base Deletion | 32412 | 0.73 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -143 | Cycle | Base Substitution | 32942 | 50.23 | 27.00 | 26.49 | 0.51 | After |
| REGRESSION.HCC1395_tumor.L002 | -143 | Cycle | Base Insertion | 32216 | 0.17 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -143 | Cycle | Base Deletion | 32216 | 0.44 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -144 | Cycle | Base Substitution | 32817 | 48.16 | 28.00 | 26.75 | 1.25 | After |
| REGRESSION.HCC1395_tumor.L002 | -144 | Cycle | Base Insertion | 32068 | 0.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -144 | Cycle | Base Deletion | 32068 | 0.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -145 | Cycle | Base Substitution | 32723 | 51.21 | 27.00 | 26.24 | 0.76 | After |
| REGRESSION.HCC1395_tumor.L002 | -145 | Cycle | Base Insertion | 25190 | 0.17 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -145 | Cycle | Base Deletion | 25190 | 1.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -146 | Cycle | Base Substitution | 32420 | 23.08 | 28.00 | 26.15 | 1.85 | After |
| REGRESSION.HCC1395_tumor.L002 | -146 | Cycle | Base Insertion | 25062 | 2.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -146 | Cycle | Base Deletion | 25062 | 0.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -147 | Cycle | Base Substitution | 32290 | 17.27 | 26.00 | 22.36 | 3.64 | After |
| REGRESSION.HCC1395_tumor.L002 | -148 | Cycle | Base Substitution | 31987 | 22.20 | 23.00 | 15.18 | 7.82 | After |
| REGRESSION.HCC1395_tumor.L002 | -149 | Cycle | Base Substitution | 19863 | 24.44 | 22.00 | 14.17 | 7.83 | After |
| REGRESSION.HCC1395_tumor.L002 | -15 | Cycle | Base Substitution | 39331 | 62.02 | 28.00 | 27.56 | 0.44 | After |
| REGRESSION.HCC1395_tumor.L002 | -15 | Cycle | Base Insertion | 39331 | 1.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -15 | Cycle | Base Deletion | 39331 | 4.73 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -150 | Cycle | Base Substitution | 6987 | 12.53 | 27.00 | 26.54 | 0.46 | After |
| REGRESSION.HCC1395_tumor.L002 | -16 | Cycle | Base Substitution | 39408 | 54.94 | 28.00 | 27.87 | 0.13 | After |
| REGRESSION.HCC1395_tumor.L002 | -16 | Cycle | Base Insertion | 39408 | 1.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -16 | Cycle | Base Deletion | 39408 | 3.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -17 | Cycle | Base Substitution | 39359 | 62.47 | 28.00 | 27.51 | 0.49 | After |
| REGRESSION.HCC1395_tumor.L002 | -17 | Cycle | Base Insertion | 39359 | 0.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -17 | Cycle | Base Deletion | 39359 | 4.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -18 | Cycle | Base Substitution | 39256 | 68.12 | 28.00 | 27.40 | 0.60 | After |
| REGRESSION.HCC1395_tumor.L002 | -18 | Cycle | Base Insertion | 39255 | 2.44 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -18 | Cycle | Base Deletion | 39255 | 3.95 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -19 | Cycle | Base Substitution | 39356 | 66.29 | 28.00 | 27.45 | 0.55 | After |
| REGRESSION.HCC1395_tumor.L002 | -19 | Cycle | Base Insertion | 39355 | 1.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -19 | Cycle | Base Deletion | 39355 | 3.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -2 | Cycle | Base Substitution | 39492 | 140.75 | 25.00 | 25.48 | -0.48 | After |
| REGRESSION.HCC1395_tumor.L002 | -20 | Cycle | Base Substitution | 39293 | 54.31 | 28.00 | 27.57 | 0.43 | After |
| REGRESSION.HCC1395_tumor.L002 | -20 | Cycle | Base Insertion | 39291 | 1.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -20 | Cycle | Base Deletion | 39291 | 3.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -21 | Cycle | Base Substitution | 39244 | 55.24 | 28.00 | 27.73 | 0.27 | After |
| REGRESSION.HCC1395_tumor.L002 | -21 | Cycle | Base Insertion | 39242 | 0.57 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -21 | Cycle | Base Deletion | 39242 | 3.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -22 | Cycle | Base Substitution | 39165 | 59.40 | 28.00 | 27.70 | 0.30 | After |
| REGRESSION.HCC1395_tumor.L002 | -22 | Cycle | Base Insertion | 39164 | 1.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -22 | Cycle | Base Deletion | 39164 | 3.21 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -23 | Cycle | Base Substitution | 39292 | 48.04 | 28.00 | 27.56 | 0.44 | After |
| REGRESSION.HCC1395_tumor.L002 | -23 | Cycle | Base Insertion | 39291 | 1.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -23 | Cycle | Base Deletion | 39291 | 3.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -24 | Cycle | Base Substitution | 39286 | 53.49 | 28.00 | 27.52 | 0.48 | After |
| REGRESSION.HCC1395_tumor.L002 | -24 | Cycle | Base Insertion | 39285 | 1.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -24 | Cycle | Base Deletion | 39285 | 3.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -25 | Cycle | Base Substitution | 39227 | 57.51 | 28.00 | 27.45 | 0.55 | After |
| REGRESSION.HCC1395_tumor.L002 | -25 | Cycle | Base Insertion | 39226 | 1.81 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -25 | Cycle | Base Deletion | 39226 | 4.37 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -26 | Cycle | Base Substitution | 39226 | 49.89 | 28.00 | 26.68 | 1.32 | After |
| REGRESSION.HCC1395_tumor.L002 | -26 | Cycle | Base Insertion | 39225 | 1.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -26 | Cycle | Base Deletion | 39225 | 4.55 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -27 | Cycle | Base Substitution | 39252 | 53.63 | 28.00 | 26.60 | 1.40 | After |
| REGRESSION.HCC1395_tumor.L002 | -27 | Cycle | Base Insertion | 39250 | 1.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -27 | Cycle | Base Deletion | 39250 | 4.09 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -28 | Cycle | Base Substitution | 39198 | 64.38 | 27.00 | 26.47 | 0.53 | After |
| REGRESSION.HCC1395_tumor.L002 | -28 | Cycle | Base Insertion | 39195 | 1.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -28 | Cycle | Base Deletion | 39195 | 4.18 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -29 | Cycle | Base Substitution | 39325 | 64.45 | 27.00 | 26.62 | 0.38 | After |
| REGRESSION.HCC1395_tumor.L002 | -29 | Cycle | Base Insertion | 39321 | 1.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -29 | Cycle | Base Deletion | 39321 | 4.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -3 | Cycle | Base Substitution | 39586 | 137.15 | 25.00 | 26.41 | -1.41 | After |
| REGRESSION.HCC1395_tumor.L002 | -30 | Cycle | Base Substitution | 39225 | 59.71 | 28.00 | 26.40 | 1.60 | After |
| REGRESSION.HCC1395_tumor.L002 | -30 | Cycle | Base Insertion | 39220 | 1.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -30 | Cycle | Base Deletion | 39220 | 3.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -31 | Cycle | Base Substitution | 39182 | 69.44 | 27.00 | 26.42 | 0.58 | After |
| REGRESSION.HCC1395_tumor.L002 | -31 | Cycle | Base Insertion | 39178 | 2.98 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -31 | Cycle | Base Deletion | 39178 | 4.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -32 | Cycle | Base Substitution | 39277 | 52.74 | 28.00 | 26.76 | 1.24 | After |
| REGRESSION.HCC1395_tumor.L002 | -32 | Cycle | Base Insertion | 39272 | 3.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -32 | Cycle | Base Deletion | 39272 | 3.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -33 | Cycle | Base Substitution | 39190 | 61.87 | 27.00 | 26.47 | 0.53 | After |
| REGRESSION.HCC1395_tumor.L002 | -33 | Cycle | Base Insertion | 39184 | 2.88 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -33 | Cycle | Base Deletion | 39184 | 3.95 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -34 | Cycle | Base Substitution | 39164 | 59.63 | 28.00 | 26.70 | 1.30 | After |
| REGRESSION.HCC1395_tumor.L002 | -34 | Cycle | Base Insertion | 39157 | 1.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -34 | Cycle | Base Deletion | 39157 | 3.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -35 | Cycle | Base Substitution | 39180 | 63.61 | 27.00 | 26.74 | 0.26 | After |
| REGRESSION.HCC1395_tumor.L002 | -35 | Cycle | Base Insertion | 39172 | 2.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -35 | Cycle | Base Deletion | 39172 | 2.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -36 | Cycle | Base Substitution | 39113 | 54.24 | 28.00 | 26.57 | 1.43 | After |
| REGRESSION.HCC1395_tumor.L002 | -36 | Cycle | Base Insertion | 39109 | 1.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -36 | Cycle | Base Deletion | 39109 | 5.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -37 | Cycle | Base Substitution | 39177 | 60.23 | 28.00 | 26.53 | 1.47 | After |
| REGRESSION.HCC1395_tumor.L002 | -37 | Cycle | Base Insertion | 39169 | 1.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -37 | Cycle | Base Deletion | 39169 | 3.95 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -38 | Cycle | Base Substitution | 39094 | 62.84 | 27.00 | 26.55 | 0.45 | After |
| REGRESSION.HCC1395_tumor.L002 | -38 | Cycle | Base Insertion | 39088 | 1.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -38 | Cycle | Base Deletion | 39088 | 4.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -39 | Cycle | Base Substitution | 39119 | 63.69 | 27.00 | 26.63 | 0.37 | After |
| REGRESSION.HCC1395_tumor.L002 | -39 | Cycle | Base Insertion | 39114 | 1.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -39 | Cycle | Base Deletion | 39114 | 4.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -4 | Cycle | Base Substitution | 39526 | 80.89 | 27.00 | 26.10 | 0.90 | After |
| REGRESSION.HCC1395_tumor.L002 | -40 | Cycle | Base Substitution | 39070 | 60.78 | 27.00 | 26.72 | 0.28 | After |
| REGRESSION.HCC1395_tumor.L002 | -40 | Cycle | Base Insertion | 39066 | 2.38 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -40 | Cycle | Base Deletion | 39066 | 3.94 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -41 | Cycle | Base Substitution | 39060 | 60.81 | 27.00 | 26.61 | 0.39 | After |
| REGRESSION.HCC1395_tumor.L002 | -41 | Cycle | Base Insertion | 39059 | 2.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -41 | Cycle | Base Deletion | 39059 | 3.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -42 | Cycle | Base Substitution | 39006 | 54.36 | 28.00 | 26.60 | 1.40 | After |
| REGRESSION.HCC1395_tumor.L002 | -42 | Cycle | Base Insertion | 39005 | 1.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -42 | Cycle | Base Deletion | 39005 | 3.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -43 | Cycle | Base Substitution | 39118 | 66.41 | 27.00 | 26.66 | 0.34 | After |
| REGRESSION.HCC1395_tumor.L002 | -43 | Cycle | Base Insertion | 39113 | 1.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -43 | Cycle | Base Deletion | 39113 | 3.72 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -44 | Cycle | Base Substitution | 38897 | 56.63 | 28.00 | 26.77 | 1.23 | After |
| REGRESSION.HCC1395_tumor.L002 | -44 | Cycle | Base Insertion | 38891 | 3.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -44 | Cycle | Base Deletion | 38891 | 3.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -45 | Cycle | Base Substitution | 39069 | 51.16 | 28.00 | 26.90 | 1.10 | After |
| REGRESSION.HCC1395_tumor.L002 | -45 | Cycle | Base Insertion | 39060 | 2.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -45 | Cycle | Base Deletion | 39060 | 4.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -46 | Cycle | Base Substitution | 39025 | 64.72 | 27.00 | 26.76 | 0.24 | After |
| REGRESSION.HCC1395_tumor.L002 | -46 | Cycle | Base Insertion | 39014 | 1.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -46 | Cycle | Base Deletion | 39014 | 3.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -47 | Cycle | Base Substitution | 39011 | 50.78 | 28.00 | 27.25 | 0.75 | After |
| REGRESSION.HCC1395_tumor.L002 | -47 | Cycle | Base Insertion | 39004 | 2.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -47 | Cycle | Base Deletion | 39004 | 3.46 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -48 | Cycle | Base Substitution | 38930 | 46.78 | 28.00 | 27.26 | 0.74 | After |
| REGRESSION.HCC1395_tumor.L002 | -48 | Cycle | Base Insertion | 38920 | 3.07 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -48 | Cycle | Base Deletion | 38920 | 4.55 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -49 | Cycle | Base Substitution | 39011 | 68.30 | 28.00 | 27.08 | 0.92 | After |
| REGRESSION.HCC1395_tumor.L002 | -49 | Cycle | Base Insertion | 38996 | 1.82 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -49 | Cycle | Base Deletion | 38996 | 5.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -5 | Cycle | Base Substitution | 39472 | 65.69 | 27.00 | 26.69 | 0.31 | After |
| REGRESSION.HCC1395_tumor.L002 | -5 | Cycle | Base Insertion | 39472 | 0.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -5 | Cycle | Base Deletion | 39472 | 1.02 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -50 | Cycle | Base Substitution | 38847 | 65.16 | 27.00 | 26.87 | 0.13 | After |
| REGRESSION.HCC1395_tumor.L002 | -50 | Cycle | Base Insertion | 38818 | 2.09 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -50 | Cycle | Base Deletion | 38818 | 5.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -51 | Cycle | Base Substitution | 38893 | 55.57 | 28.00 | 26.72 | 1.28 | After |
| REGRESSION.HCC1395_tumor.L002 | -51 | Cycle | Base Insertion | 38857 | 2.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -51 | Cycle | Base Deletion | 38857 | 4.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -52 | Cycle | Base Substitution | 38911 | 64.28 | 27.00 | 26.89 | 0.11 | After |
| REGRESSION.HCC1395_tumor.L002 | -52 | Cycle | Base Insertion | 38873 | 1.44 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -52 | Cycle | Base Deletion | 38873 | 4.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -53 | Cycle | Base Substitution | 38849 | 58.03 | 28.00 | 26.88 | 1.12 | After |
| REGRESSION.HCC1395_tumor.L002 | -53 | Cycle | Base Insertion | 38812 | 2.51 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -53 | Cycle | Base Deletion | 38812 | 4.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -54 | Cycle | Base Substitution | 38920 | 63.28 | 27.00 | 26.75 | 0.25 | After |
| REGRESSION.HCC1395_tumor.L002 | -54 | Cycle | Base Insertion | 38889 | 2.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -54 | Cycle | Base Deletion | 38889 | 3.94 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -55 | Cycle | Base Substitution | 39021 | 63.07 | 27.00 | 26.79 | 0.21 | After |
| REGRESSION.HCC1395_tumor.L002 | -55 | Cycle | Base Insertion | 38986 | 4.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -55 | Cycle | Base Deletion | 38986 | 4.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -56 | Cycle | Base Substitution | 38868 | 67.10 | 27.00 | 26.84 | 0.16 | After |
| REGRESSION.HCC1395_tumor.L002 | -56 | Cycle | Base Insertion | 38830 | 2.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -56 | Cycle | Base Deletion | 38830 | 3.02 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -57 | Cycle | Base Substitution | 38825 | 64.55 | 28.00 | 27.00 | 1.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -57 | Cycle | Base Insertion | 38769 | 2.30 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -57 | Cycle | Base Deletion | 38769 | 3.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -58 | Cycle | Base Substitution | 38933 | 56.64 | 28.00 | 27.00 | 1.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -58 | Cycle | Base Insertion | 38868 | 1.30 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -58 | Cycle | Base Deletion | 38868 | 3.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -59 | Cycle | Base Substitution | 38877 | 59.65 | 27.00 | 26.98 | 0.02 | After |
| REGRESSION.HCC1395_tumor.L002 | -59 | Cycle | Base Insertion | 38806 | 1.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -59 | Cycle | Base Deletion | 38806 | 3.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -6 | Cycle | Base Substitution | 39431 | 68.19 | 28.00 | 27.03 | 0.97 | After |
| REGRESSION.HCC1395_tumor.L002 | -6 | Cycle | Base Insertion | 39431 | 0.31 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -6 | Cycle | Base Deletion | 39431 | 1.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -60 | Cycle | Base Substitution | 38693 | 65.41 | 27.00 | 26.80 | 0.20 | After |
| REGRESSION.HCC1395_tumor.L002 | -60 | Cycle | Base Insertion | 38619 | 1.29 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -60 | Cycle | Base Deletion | 38619 | 4.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -61 | Cycle | Base Substitution | 38878 | 71.30 | 27.00 | 26.75 | 0.25 | After |
| REGRESSION.HCC1395_tumor.L002 | -61 | Cycle | Base Insertion | 38801 | 2.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -61 | Cycle | Base Deletion | 38801 | 3.85 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -62 | Cycle | Base Substitution | 38702 | 55.39 | 28.00 | 27.21 | 0.79 | After |
| REGRESSION.HCC1395_tumor.L002 | -62 | Cycle | Base Insertion | 38625 | 1.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -62 | Cycle | Base Deletion | 38625 | 3.77 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -63 | Cycle | Base Substitution | 38685 | 58.25 | 28.00 | 26.84 | 1.16 | After |
| REGRESSION.HCC1395_tumor.L002 | -63 | Cycle | Base Insertion | 38616 | 1.02 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -63 | Cycle | Base Deletion | 38616 | 3.81 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -64 | Cycle | Base Substitution | 38702 | 53.75 | 28.00 | 26.99 | 1.01 | After |
| REGRESSION.HCC1395_tumor.L002 | -64 | Cycle | Base Insertion | 38620 | 2.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -64 | Cycle | Base Deletion | 38620 | 3.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -65 | Cycle | Base Substitution | 38581 | 68.58 | 27.00 | 26.57 | 0.43 | After |
| REGRESSION.HCC1395_tumor.L002 | -65 | Cycle | Base Insertion | 38489 | 1.84 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -65 | Cycle | Base Deletion | 38489 | 3.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -66 | Cycle | Base Substitution | 38556 | 64.37 | 27.00 | 26.74 | 0.26 | After |
| REGRESSION.HCC1395_tumor.L002 | -66 | Cycle | Base Insertion | 38468 | 1.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -66 | Cycle | Base Deletion | 38468 | 4.37 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -67 | Cycle | Base Substitution | 38565 | 51.27 | 28.00 | 26.89 | 1.11 | After |
| REGRESSION.HCC1395_tumor.L002 | -67 | Cycle | Base Insertion | 38456 | 1.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -67 | Cycle | Base Deletion | 38456 | 3.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -68 | Cycle | Base Substitution | 38520 | 71.77 | 27.00 | 27.13 | -0.13 | After |
| REGRESSION.HCC1395_tumor.L002 | -68 | Cycle | Base Insertion | 38410 | 1.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -68 | Cycle | Base Deletion | 38410 | 3.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -69 | Cycle | Base Substitution | 38554 | 54.47 | 28.00 | 26.68 | 1.32 | After |
| REGRESSION.HCC1395_tumor.L002 | -69 | Cycle | Base Insertion | 38448 | 1.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -69 | Cycle | Base Deletion | 38448 | 3.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -7 | Cycle | Base Substitution | 39408 | 65.08 | 27.00 | 26.98 | 0.02 | After |
| REGRESSION.HCC1395_tumor.L002 | -7 | Cycle | Base Insertion | 39408 | 0.31 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -7 | Cycle | Base Deletion | 39408 | 1.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -70 | Cycle | Base Substitution | 38544 | 63.16 | 27.00 | 26.70 | 0.30 | After |
| REGRESSION.HCC1395_tumor.L002 | -70 | Cycle | Base Insertion | 38424 | 1.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -70 | Cycle | Base Deletion | 38424 | 3.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -71 | Cycle | Base Substitution | 38509 | 64.85 | 27.00 | 26.59 | 0.41 | After |
| REGRESSION.HCC1395_tumor.L002 | -71 | Cycle | Base Insertion | 38381 | 2.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -71 | Cycle | Base Deletion | 38381 | 3.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -72 | Cycle | Base Substitution | 38487 | 73.72 | 27.00 | 26.82 | 0.18 | After |
| REGRESSION.HCC1395_tumor.L002 | -72 | Cycle | Base Insertion | 38349 | 2.21 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -72 | Cycle | Base Deletion | 38349 | 4.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -73 | Cycle | Base Substitution | 38496 | 63.78 | 27.00 | 26.61 | 0.39 | After |
| REGRESSION.HCC1395_tumor.L002 | -73 | Cycle | Base Insertion | 38364 | 3.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -73 | Cycle | Base Deletion | 38364 | 4.61 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -74 | Cycle | Base Substitution | 38284 | 64.62 | 27.00 | 26.92 | 0.08 | After |
| REGRESSION.HCC1395_tumor.L002 | -74 | Cycle | Base Insertion | 38149 | 3.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -74 | Cycle | Base Deletion | 38149 | 3.73 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -75 | Cycle | Base Substitution | 38331 | 62.45 | 27.00 | 26.60 | 0.40 | After |
| REGRESSION.HCC1395_tumor.L002 | -75 | Cycle | Base Insertion | 38179 | 2.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -75 | Cycle | Base Deletion | 38179 | 4.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -76 | Cycle | Base Substitution | 38209 | 74.90 | 27.00 | 26.66 | 0.34 | After |
| REGRESSION.HCC1395_tumor.L002 | -76 | Cycle | Base Insertion | 38068 | 1.72 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -76 | Cycle | Base Deletion | 38068 | 4.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -77 | Cycle | Base Substitution | 38264 | 64.33 | 28.00 | 27.07 | 0.93 | After |
| REGRESSION.HCC1395_tumor.L002 | -77 | Cycle | Base Insertion | 38108 | 2.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -77 | Cycle | Base Deletion | 38108 | 3.29 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -78 | Cycle | Base Substitution | 38298 | 75.20 | 27.00 | 26.73 | 0.27 | After |
| REGRESSION.HCC1395_tumor.L002 | -78 | Cycle | Base Insertion | 38126 | 1.77 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -78 | Cycle | Base Deletion | 38126 | 3.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -79 | Cycle | Base Substitution | 38242 | 74.54 | 27.00 | 26.67 | 0.33 | After |
| REGRESSION.HCC1395_tumor.L002 | -79 | Cycle | Base Insertion | 38064 | 1.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -79 | Cycle | Base Deletion | 38064 | 4.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -8 | Cycle | Base Substitution | 39343 | 60.37 | 28.00 | 26.97 | 1.03 | After |
| REGRESSION.HCC1395_tumor.L002 | -8 | Cycle | Base Insertion | 39343 | 0.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -8 | Cycle | Base Deletion | 39343 | 1.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -80 | Cycle | Base Substitution | 38190 | 80.20 | 27.00 | 26.60 | 0.40 | After |
| REGRESSION.HCC1395_tumor.L002 | -80 | Cycle | Base Insertion | 37993 | 3.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -80 | Cycle | Base Deletion | 37993 | 4.81 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -81 | Cycle | Base Substitution | 38097 | 64.79 | 27.00 | 26.69 | 0.31 | After |
| REGRESSION.HCC1395_tumor.L002 | -81 | Cycle | Base Insertion | 37891 | 2.77 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -81 | Cycle | Base Deletion | 37891 | 5.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -82 | Cycle | Base Substitution | 38173 | 74.65 | 27.00 | 26.66 | 0.34 | After |
| REGRESSION.HCC1395_tumor.L002 | -82 | Cycle | Base Insertion | 37959 | 1.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -82 | Cycle | Base Deletion | 37959 | 5.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -83 | Cycle | Base Substitution | 38026 | 74.71 | 27.00 | 26.93 | 0.07 | After |
| REGRESSION.HCC1395_tumor.L002 | -83 | Cycle | Base Insertion | 37813 | 2.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -83 | Cycle | Base Deletion | 37813 | 3.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -84 | Cycle | Base Substitution | 37936 | 69.34 | 27.00 | 26.99 | 0.01 | After |
| REGRESSION.HCC1395_tumor.L002 | -84 | Cycle | Base Insertion | 37721 | 2.77 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -84 | Cycle | Base Deletion | 37721 | 3.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -85 | Cycle | Base Substitution | 37875 | 59.70 | 27.00 | 26.50 | 0.50 | After |
| REGRESSION.HCC1395_tumor.L002 | -85 | Cycle | Base Insertion | 37651 | 2.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -85 | Cycle | Base Deletion | 37651 | 3.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -86 | Cycle | Base Substitution | 37830 | 79.72 | 27.00 | 26.50 | 0.50 | After |
| REGRESSION.HCC1395_tumor.L002 | -86 | Cycle | Base Insertion | 37603 | 2.36 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -86 | Cycle | Base Deletion | 37603 | 2.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -87 | Cycle | Base Substitution | 37884 | 56.45 | 28.00 | 26.65 | 1.35 | After |
| REGRESSION.HCC1395_tumor.L002 | -87 | Cycle | Base Insertion | 37635 | 3.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -87 | Cycle | Base Deletion | 37635 | 2.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -88 | Cycle | Base Substitution | 37846 | 69.39 | 27.00 | 26.48 | 0.52 | After |
| REGRESSION.HCC1395_tumor.L002 | -88 | Cycle | Base Insertion | 37595 | 1.36 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -88 | Cycle | Base Deletion | 37595 | 2.72 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -89 | Cycle | Base Substitution | 37709 | 71.52 | 27.00 | 26.49 | 0.51 | After |
| REGRESSION.HCC1395_tumor.L002 | -89 | Cycle | Base Insertion | 37452 | 1.37 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -89 | Cycle | Base Deletion | 37452 | 2.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -9 | Cycle | Base Substitution | 39424 | 42.54 | 29.00 | 27.77 | 1.23 | After |
| REGRESSION.HCC1395_tumor.L002 | -9 | Cycle | Base Insertion | 39424 | 2.88 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -9 | Cycle | Base Deletion | 39424 | 1.81 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -90 | Cycle | Base Substitution | 37470 | 89.61 | 26.00 | 25.71 | 0.29 | After |
| REGRESSION.HCC1395_tumor.L002 | -90 | Cycle | Base Insertion | 37213 | 1.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -90 | Cycle | Base Deletion | 37213 | 3.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -91 | Cycle | Base Substitution | 37673 | 63.42 | 27.00 | 26.53 | 0.47 | After |
| REGRESSION.HCC1395_tumor.L002 | -91 | Cycle | Base Insertion | 37418 | 1.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -91 | Cycle | Base Deletion | 37418 | 4.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -92 | Cycle | Base Substitution | 37621 | 88.56 | 26.00 | 25.98 | 0.02 | After |
| REGRESSION.HCC1395_tumor.L002 | -92 | Cycle | Base Insertion | 37374 | 2.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -92 | Cycle | Base Deletion | 37374 | 4.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -93 | Cycle | Base Substitution | 37419 | 78.02 | 27.00 | 26.56 | 0.44 | After |
| REGRESSION.HCC1395_tumor.L002 | -93 | Cycle | Base Insertion | 37162 | 2.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -93 | Cycle | Base Deletion | 37162 | 4.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -94 | Cycle | Base Substitution | 37374 | 91.61 | 26.00 | 25.77 | 0.23 | After |
| REGRESSION.HCC1395_tumor.L002 | -94 | Cycle | Base Insertion | 37104 | 3.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -94 | Cycle | Base Deletion | 37104 | 4.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -95 | Cycle | Base Substitution | 37224 | 73.03 | 27.00 | 26.53 | 0.47 | After |
| REGRESSION.HCC1395_tumor.L002 | -95 | Cycle | Base Insertion | 36957 | 3.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -95 | Cycle | Base Deletion | 36957 | 3.46 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -96 | Cycle | Base Substitution | 37224 | 62.66 | 27.00 | 26.35 | 0.65 | After |
| REGRESSION.HCC1395_tumor.L002 | -96 | Cycle | Base Insertion | 36946 | 2.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -96 | Cycle | Base Deletion | 36946 | 3.84 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -97 | Cycle | Base Substitution | 37095 | 68.53 | 27.00 | 26.90 | 0.10 | After |
| REGRESSION.HCC1395_tumor.L002 | -97 | Cycle | Base Insertion | 36822 | 2.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -97 | Cycle | Base Deletion | 36822 | 3.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -98 | Cycle | Base Substitution | 37057 | 80.73 | 27.00 | 26.56 | 0.44 | After |
| REGRESSION.HCC1395_tumor.L002 | -98 | Cycle | Base Insertion | 36756 | 1.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -98 | Cycle | Base Deletion | 36756 | 3.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -99 | Cycle | Base Substitution | 36930 | 82.36 | 26.00 | 26.33 | -0.33 | After |
| REGRESSION.HCC1395_tumor.L002 | -99 | Cycle | Base Insertion | 36624 | 2.36 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | -99 | Cycle | Base Deletion | 36624 | 3.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 1 | Cycle | Base Substitution | 39142 | 77.46 | 27.00 | 25.86 | 1.14 | After |
| REGRESSION.HCC1395_tumor.L002 | 10 | Cycle | Base Substitution | 39500 | 55.68 | 28.00 | 27.41 | 0.59 | After |
| REGRESSION.HCC1395_tumor.L002 | 10 | Cycle | Base Insertion | 39500 | 1.42 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 10 | Cycle | Base Deletion | 39500 | 1.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 100 | Cycle | Base Substitution | 36952 | 74.79 | 27.00 | 26.79 | 0.21 | After |
| REGRESSION.HCC1395_tumor.L002 | 100 | Cycle | Base Insertion | 36642 | 1.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 100 | Cycle | Base Deletion | 36642 | 3.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 101 | Cycle | Base Substitution | 36821 | 81.21 | 27.00 | 26.72 | 0.28 | After |
| REGRESSION.HCC1395_tumor.L002 | 101 | Cycle | Base Insertion | 36497 | 3.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 101 | Cycle | Base Deletion | 36497 | 3.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 102 | Cycle | Base Substitution | 36922 | 82.12 | 26.00 | 26.54 | -0.54 | After |
| REGRESSION.HCC1395_tumor.L002 | 102 | Cycle | Base Insertion | 36617 | 1.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 102 | Cycle | Base Deletion | 36617 | 3.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 103 | Cycle | Base Substitution | 36726 | 59.98 | 27.00 | 26.86 | 0.14 | After |
| REGRESSION.HCC1395_tumor.L002 | 103 | Cycle | Base Insertion | 36397 | 1.56 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 103 | Cycle | Base Deletion | 36397 | 4.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 104 | Cycle | Base Substitution | 36648 | 69.27 | 27.00 | 26.79 | 0.21 | After |
| REGRESSION.HCC1395_tumor.L002 | 104 | Cycle | Base Insertion | 36307 | 2.96 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 104 | Cycle | Base Deletion | 36307 | 3.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 105 | Cycle | Base Substitution | 36603 | 53.98 | 28.00 | 26.49 | 1.51 | After |
| REGRESSION.HCC1395_tumor.L002 | 105 | Cycle | Base Insertion | 36278 | 1.09 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 105 | Cycle | Base Deletion | 36278 | 3.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 106 | Cycle | Base Substitution | 36507 | 71.38 | 27.00 | 26.84 | 0.16 | After |
| REGRESSION.HCC1395_tumor.L002 | 106 | Cycle | Base Insertion | 36180 | 0.86 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 106 | Cycle | Base Deletion | 36180 | 3.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 107 | Cycle | Base Substitution | 36476 | 67.32 | 27.00 | 26.49 | 0.51 | After |
| REGRESSION.HCC1395_tumor.L002 | 107 | Cycle | Base Insertion | 36177 | 1.17 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 107 | Cycle | Base Deletion | 36177 | 3.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 108 | Cycle | Base Substitution | 36283 | 91.18 | 26.00 | 26.48 | -0.48 | After |
| REGRESSION.HCC1395_tumor.L002 | 108 | Cycle | Base Insertion | 35988 | 1.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 108 | Cycle | Base Deletion | 35988 | 3.48 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 109 | Cycle | Base Substitution | 36261 | 76.02 | 27.00 | 26.45 | 0.55 | After |
| REGRESSION.HCC1395_tumor.L002 | 109 | Cycle | Base Insertion | 35947 | 2.36 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 109 | Cycle | Base Deletion | 35947 | 3.37 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 11 | Cycle | Base Substitution | 39425 | 40.46 | 29.00 | 27.49 | 1.51 | After |
| REGRESSION.HCC1395_tumor.L002 | 11 | Cycle | Base Insertion | 39425 | 1.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 11 | Cycle | Base Deletion | 39425 | 1.95 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 110 | Cycle | Base Substitution | 36179 | 72.12 | 27.00 | 26.46 | 0.54 | After |
| REGRESSION.HCC1395_tumor.L002 | 110 | Cycle | Base Insertion | 35856 | 1.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 110 | Cycle | Base Deletion | 35856 | 3.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 111 | Cycle | Base Substitution | 36150 | 75.86 | 27.00 | 26.63 | 0.37 | After |
| REGRESSION.HCC1395_tumor.L002 | 111 | Cycle | Base Insertion | 35832 | 1.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 111 | Cycle | Base Deletion | 35832 | 3.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 112 | Cycle | Base Substitution | 35953 | 77.38 | 27.00 | 26.68 | 0.32 | After |
| REGRESSION.HCC1395_tumor.L002 | 112 | Cycle | Base Insertion | 35644 | 1.81 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 112 | Cycle | Base Deletion | 35644 | 3.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 113 | Cycle | Base Substitution | 35839 | 67.86 | 27.00 | 27.02 | -0.02 | After |
| REGRESSION.HCC1395_tumor.L002 | 113 | Cycle | Base Insertion | 35544 | 1.30 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 113 | Cycle | Base Deletion | 35544 | 3.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 114 | Cycle | Base Substitution | 35931 | 80.43 | 26.00 | 26.66 | -0.66 | After |
| REGRESSION.HCC1395_tumor.L002 | 114 | Cycle | Base Insertion | 35611 | 1.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 114 | Cycle | Base Deletion | 35611 | 3.02 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 115 | Cycle | Base Substitution | 35686 | 75.90 | 27.00 | 26.36 | 0.64 | After |
| REGRESSION.HCC1395_tumor.L002 | 115 | Cycle | Base Insertion | 35360 | 1.30 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 115 | Cycle | Base Deletion | 35360 | 3.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 116 | Cycle | Base Substitution | 35562 | 75.50 | 27.00 | 26.30 | 0.70 | After |
| REGRESSION.HCC1395_tumor.L002 | 116 | Cycle | Base Insertion | 35201 | 2.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 116 | Cycle | Base Deletion | 35201 | 3.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 117 | Cycle | Base Substitution | 35605 | 81.33 | 26.00 | 25.78 | 0.22 | After |
| REGRESSION.HCC1395_tumor.L002 | 117 | Cycle | Base Insertion | 35230 | 2.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 117 | Cycle | Base Deletion | 35230 | 3.56 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 118 | Cycle | Base Substitution | 35520 | 72.81 | 27.00 | 26.42 | 0.58 | After |
| REGRESSION.HCC1395_tumor.L002 | 118 | Cycle | Base Insertion | 35139 | 1.44 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 118 | Cycle | Base Deletion | 35139 | 3.17 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 119 | Cycle | Base Substitution | 35419 | 65.53 | 27.00 | 26.51 | 0.49 | After |
| REGRESSION.HCC1395_tumor.L002 | 119 | Cycle | Base Insertion | 35045 | 1.96 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 119 | Cycle | Base Deletion | 35045 | 2.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 12 | Cycle | Base Substitution | 39375 | 42.48 | 29.00 | 27.53 | 1.47 | After |
| REGRESSION.HCC1395_tumor.L002 | 12 | Cycle | Base Insertion | 39375 | 0.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 12 | Cycle | Base Deletion | 39375 | 1.98 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 120 | Cycle | Base Substitution | 35309 | 71.55 | 27.00 | 26.46 | 0.54 | After |
| REGRESSION.HCC1395_tumor.L002 | 120 | Cycle | Base Insertion | 34948 | 1.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 120 | Cycle | Base Deletion | 34948 | 2.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 121 | Cycle | Base Substitution | 35259 | 88.61 | 26.00 | 26.21 | -0.21 | After |
| REGRESSION.HCC1395_tumor.L002 | 121 | Cycle | Base Insertion | 34921 | 1.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 121 | Cycle | Base Deletion | 34921 | 2.47 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 122 | Cycle | Base Substitution | 35067 | 69.22 | 27.00 | 26.46 | 0.54 | After |
| REGRESSION.HCC1395_tumor.L002 | 122 | Cycle | Base Insertion | 34707 | 1.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 122 | Cycle | Base Deletion | 34707 | 3.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 123 | Cycle | Base Substitution | 35173 | 68.30 | 27.00 | 26.43 | 0.57 | After |
| REGRESSION.HCC1395_tumor.L002 | 123 | Cycle | Base Insertion | 34828 | 1.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 123 | Cycle | Base Deletion | 34828 | 3.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 124 | Cycle | Base Substitution | 35062 | 83.16 | 26.00 | 25.89 | 0.11 | After |
| REGRESSION.HCC1395_tumor.L002 | 124 | Cycle | Base Insertion | 34703 | 0.98 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 124 | Cycle | Base Deletion | 34703 | 3.79 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 125 | Cycle | Base Substitution | 34840 | 83.12 | 26.00 | 26.25 | -0.25 | After |
| REGRESSION.HCC1395_tumor.L002 | 125 | Cycle | Base Insertion | 34476 | 0.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 125 | Cycle | Base Deletion | 34476 | 3.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 126 | Cycle | Base Substitution | 34796 | 76.37 | 27.00 | 26.30 | 0.70 | After |
| REGRESSION.HCC1395_tumor.L002 | 126 | Cycle | Base Insertion | 34446 | 0.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 126 | Cycle | Base Deletion | 34446 | 3.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 127 | Cycle | Base Substitution | 34726 | 61.12 | 27.00 | 26.53 | 0.47 | After |
| REGRESSION.HCC1395_tumor.L002 | 127 | Cycle | Base Insertion | 34353 | 2.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 127 | Cycle | Base Deletion | 34353 | 3.10 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 128 | Cycle | Base Substitution | 34514 | 73.61 | 27.00 | 26.43 | 0.57 | After |
| REGRESSION.HCC1395_tumor.L002 | 128 | Cycle | Base Insertion | 34129 | 1.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 128 | Cycle | Base Deletion | 34129 | 3.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 129 | Cycle | Base Substitution | 34545 | 65.31 | 27.00 | 26.32 | 0.68 | After |
| REGRESSION.HCC1395_tumor.L002 | 129 | Cycle | Base Insertion | 34164 | 1.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 129 | Cycle | Base Deletion | 34164 | 2.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 13 | Cycle | Base Substitution | 39424 | 43.51 | 29.00 | 27.88 | 1.12 | After |
| REGRESSION.HCC1395_tumor.L002 | 13 | Cycle | Base Insertion | 39424 | 1.26 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 13 | Cycle | Base Deletion | 39424 | 2.46 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 130 | Cycle | Base Substitution | 34515 | 70.66 | 27.00 | 26.44 | 0.56 | After |
| REGRESSION.HCC1395_tumor.L002 | 130 | Cycle | Base Insertion | 34169 | 1.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 130 | Cycle | Base Deletion | 34169 | 3.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 131 | Cycle | Base Substitution | 34372 | 84.89 | 26.00 | 25.70 | 0.30 | After |
| REGRESSION.HCC1395_tumor.L002 | 131 | Cycle | Base Insertion | 33999 | 1.36 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 131 | Cycle | Base Deletion | 33999 | 3.48 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 132 | Cycle | Base Substitution | 34239 | 80.64 | 26.00 | 25.82 | 0.18 | After |
| REGRESSION.HCC1395_tumor.L002 | 132 | Cycle | Base Insertion | 33862 | 1.73 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 132 | Cycle | Base Deletion | 33862 | 3.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 133 | Cycle | Base Substitution | 34197 | 78.79 | 26.00 | 25.84 | 0.16 | After |
| REGRESSION.HCC1395_tumor.L002 | 133 | Cycle | Base Insertion | 33792 | 2.02 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 133 | Cycle | Base Deletion | 33792 | 3.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 134 | Cycle | Base Substitution | 34236 | 67.99 | 27.00 | 26.37 | 0.63 | After |
| REGRESSION.HCC1395_tumor.L002 | 134 | Cycle | Base Insertion | 33811 | 0.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 134 | Cycle | Base Deletion | 33811 | 1.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 135 | Cycle | Base Substitution | 33965 | 80.26 | 26.00 | 26.33 | -0.33 | After |
| REGRESSION.HCC1395_tumor.L002 | 135 | Cycle | Base Insertion | 33544 | 0.51 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 135 | Cycle | Base Deletion | 33544 | 1.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 136 | Cycle | Base Substitution | 33943 | 62.48 | 27.00 | 26.55 | 0.45 | After |
| REGRESSION.HCC1395_tumor.L002 | 136 | Cycle | Base Insertion | 33527 | 1.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 136 | Cycle | Base Deletion | 33527 | 1.26 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 137 | Cycle | Base Substitution | 33820 | 80.88 | 26.00 | 26.25 | -0.25 | After |
| REGRESSION.HCC1395_tumor.L002 | 137 | Cycle | Base Insertion | 33384 | 0.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 137 | Cycle | Base Deletion | 33384 | 1.51 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 138 | Cycle | Base Substitution | 33698 | 82.52 | 26.00 | 26.32 | -0.32 | After |
| REGRESSION.HCC1395_tumor.L002 | 138 | Cycle | Base Insertion | 33283 | 1.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 138 | Cycle | Base Deletion | 33283 | 2.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 139 | Cycle | Base Substitution | 33690 | 103.04 | 25.00 | 25.47 | -0.47 | After |
| REGRESSION.HCC1395_tumor.L002 | 139 | Cycle | Base Insertion | 33245 | 1.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 139 | Cycle | Base Deletion | 33245 | 2.47 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 14 | Cycle | Base Substitution | 39380 | 39.08 | 29.00 | 27.39 | 1.61 | After |
| REGRESSION.HCC1395_tumor.L002 | 14 | Cycle | Base Insertion | 39380 | 1.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 14 | Cycle | Base Deletion | 39380 | 3.21 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 140 | Cycle | Base Substitution | 33477 | 70.05 | 27.00 | 26.46 | 0.54 | After |
| REGRESSION.HCC1395_tumor.L002 | 140 | Cycle | Base Insertion | 33054 | 1.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 140 | Cycle | Base Deletion | 33054 | 4.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 141 | Cycle | Base Substitution | 33340 | 74.43 | 26.00 | 26.42 | -0.42 | After |
| REGRESSION.HCC1395_tumor.L002 | 141 | Cycle | Base Insertion | 32918 | 0.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 141 | Cycle | Base Deletion | 32918 | 2.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 142 | Cycle | Base Substitution | 33265 | 84.51 | 26.00 | 25.74 | 0.26 | After |
| REGRESSION.HCC1395_tumor.L002 | 142 | Cycle | Base Insertion | 32764 | 1.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 142 | Cycle | Base Deletion | 32764 | 1.56 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 143 | Cycle | Base Substitution | 33097 | 75.85 | 26.00 | 26.31 | -0.31 | After |
| REGRESSION.HCC1395_tumor.L002 | 143 | Cycle | Base Insertion | 32587 | 0.84 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 143 | Cycle | Base Deletion | 32587 | 0.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 144 | Cycle | Base Substitution | 33050 | 82.14 | 26.00 | 26.26 | -0.26 | After |
| REGRESSION.HCC1395_tumor.L002 | 144 | Cycle | Base Insertion | 32524 | 0.07 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 144 | Cycle | Base Deletion | 32524 | 0.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 145 | Cycle | Base Substitution | 32854 | 72.54 | 26.00 | 26.34 | -0.34 | After |
| REGRESSION.HCC1395_tumor.L002 | 145 | Cycle | Base Insertion | 32335 | 1.18 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 145 | Cycle | Base Deletion | 32335 | 0.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 146 | Cycle | Base Substitution | 32723 | 71.53 | 27.00 | 26.36 | 0.64 | After |
| REGRESSION.HCC1395_tumor.L002 | 146 | Cycle | Base Insertion | 32264 | 0.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 146 | Cycle | Base Deletion | 32264 | 0.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 147 | Cycle | Base Substitution | 32706 | 77.27 | 26.00 | 26.37 | -0.37 | After |
| REGRESSION.HCC1395_tumor.L002 | 148 | Cycle | Base Substitution | 32607 | 107.56 | 25.00 | 26.38 | -1.38 | After |
| REGRESSION.HCC1395_tumor.L002 | 149 | Cycle | Base Substitution | 32461 | 86.40 | 26.00 | 26.26 | -0.26 | After |
| REGRESSION.HCC1395_tumor.L002 | 15 | Cycle | Base Substitution | 39401 | 37.98 | 29.00 | 27.86 | 1.14 | After |
| REGRESSION.HCC1395_tumor.L002 | 15 | Cycle | Base Insertion | 39401 | 2.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 15 | Cycle | Base Deletion | 39401 | 3.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 150 | Cycle | Base Substitution | 32275 | 74.18 | 26.00 | 26.44 | -0.44 | After |
| REGRESSION.HCC1395_tumor.L002 | 16 | Cycle | Base Substitution | 39310 | 32.13 | 30.00 | 28.61 | 1.39 | After |
| REGRESSION.HCC1395_tumor.L002 | 16 | Cycle | Base Insertion | 39310 | 1.29 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 16 | Cycle | Base Deletion | 39310 | 4.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 17 | Cycle | Base Substitution | 39334 | 35.83 | 29.00 | 28.33 | 0.67 | After |
| REGRESSION.HCC1395_tumor.L002 | 17 | Cycle | Base Insertion | 39334 | 1.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 17 | Cycle | Base Deletion | 39334 | 4.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 18 | Cycle | Base Substitution | 39556 | 24.03 | 30.00 | 28.58 | 1.42 | After |
| REGRESSION.HCC1395_tumor.L002 | 18 | Cycle | Base Insertion | 39555 | 2.42 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 18 | Cycle | Base Deletion | 39555 | 5.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 19 | Cycle | Base Substitution | 39180 | 33.17 | 30.00 | 28.67 | 1.33 | After |
| REGRESSION.HCC1395_tumor.L002 | 19 | Cycle | Base Insertion | 39179 | 1.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 19 | Cycle | Base Deletion | 39179 | 3.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 2 | Cycle | Base Substitution | 39616 | 90.17 | 26.00 | 26.99 | -0.99 | After |
| REGRESSION.HCC1395_tumor.L002 | 20 | Cycle | Base Substitution | 39278 | 31.17 | 30.00 | 28.38 | 1.62 | After |
| REGRESSION.HCC1395_tumor.L002 | 20 | Cycle | Base Insertion | 39277 | 1.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 20 | Cycle | Base Deletion | 39277 | 4.10 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 21 | Cycle | Base Substitution | 39334 | 37.23 | 29.00 | 28.49 | 0.51 | After |
| REGRESSION.HCC1395_tumor.L002 | 21 | Cycle | Base Insertion | 39333 | 2.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 21 | Cycle | Base Deletion | 39333 | 3.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 22 | Cycle | Base Substitution | 39292 | 33.12 | 30.00 | 28.79 | 1.21 | After |
| REGRESSION.HCC1395_tumor.L002 | 22 | Cycle | Base Insertion | 39292 | 3.79 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 22 | Cycle | Base Deletion | 39292 | 3.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 23 | Cycle | Base Substitution | 39358 | 24.00 | 30.00 | 28.47 | 1.53 | After |
| REGRESSION.HCC1395_tumor.L002 | 23 | Cycle | Base Insertion | 39358 | 1.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 23 | Cycle | Base Deletion | 39358 | 4.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 24 | Cycle | Base Substitution | 39229 | 28.89 | 30.00 | 28.61 | 1.39 | After |
| REGRESSION.HCC1395_tumor.L002 | 24 | Cycle | Base Insertion | 39229 | 1.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 24 | Cycle | Base Deletion | 39229 | 3.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 25 | Cycle | Base Substitution | 39224 | 32.86 | 30.00 | 28.62 | 1.38 | After |
| REGRESSION.HCC1395_tumor.L002 | 25 | Cycle | Base Insertion | 39224 | 1.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 25 | Cycle | Base Deletion | 39224 | 3.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 26 | Cycle | Base Substitution | 39351 | 41.18 | 29.00 | 27.65 | 1.35 | After |
| REGRESSION.HCC1395_tumor.L002 | 26 | Cycle | Base Insertion | 39351 | 2.84 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 26 | Cycle | Base Deletion | 39351 | 3.99 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 27 | Cycle | Base Substitution | 39319 | 38.63 | 29.00 | 28.02 | 0.98 | After |
| REGRESSION.HCC1395_tumor.L002 | 27 | Cycle | Base Insertion | 39319 | 1.88 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 27 | Cycle | Base Deletion | 39319 | 3.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 28 | Cycle | Base Substitution | 39211 | 43.38 | 29.00 | 28.16 | 0.84 | After |
| REGRESSION.HCC1395_tumor.L002 | 28 | Cycle | Base Insertion | 39211 | 1.95 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 28 | Cycle | Base Deletion | 39211 | 4.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 29 | Cycle | Base Substitution | 39202 | 40.18 | 29.00 | 28.09 | 0.91 | After |
| REGRESSION.HCC1395_tumor.L002 | 29 | Cycle | Base Insertion | 39201 | 3.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 29 | Cycle | Base Deletion | 39201 | 3.55 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 3 | Cycle | Base Substitution | 39821 | 107.50 | 26.00 | 26.85 | -0.85 | After |
| REGRESSION.HCC1395_tumor.L002 | 30 | Cycle | Base Substitution | 39205 | 36.51 | 29.00 | 27.84 | 1.16 | After |
| REGRESSION.HCC1395_tumor.L002 | 30 | Cycle | Base Insertion | 39203 | 2.88 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 30 | Cycle | Base Deletion | 39203 | 3.85 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 31 | Cycle | Base Substitution | 39274 | 35.68 | 29.00 | 27.83 | 1.17 | After |
| REGRESSION.HCC1395_tumor.L002 | 31 | Cycle | Base Insertion | 39272 | 1.37 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 31 | Cycle | Base Deletion | 39272 | 3.36 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 32 | Cycle | Base Substitution | 39268 | 61.94 | 28.00 | 27.66 | 0.34 | After |
| REGRESSION.HCC1395_tumor.L002 | 32 | Cycle | Base Insertion | 39265 | 3.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 32 | Cycle | Base Deletion | 39265 | 3.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 33 | Cycle | Base Substitution | 39301 | 40.20 | 29.00 | 27.89 | 1.11 | After |
| REGRESSION.HCC1395_tumor.L002 | 33 | Cycle | Base Insertion | 39297 | 2.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 33 | Cycle | Base Deletion | 39297 | 2.88 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 34 | Cycle | Base Substitution | 39294 | 46.85 | 28.00 | 27.82 | 0.18 | After |
| REGRESSION.HCC1395_tumor.L002 | 34 | Cycle | Base Insertion | 39291 | 2.38 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 34 | Cycle | Base Deletion | 39291 | 3.38 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 35 | Cycle | Base Substitution | 39266 | 49.65 | 28.00 | 27.60 | 0.40 | After |
| REGRESSION.HCC1395_tumor.L002 | 35 | Cycle | Base Insertion | 39264 | 2.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 35 | Cycle | Base Deletion | 39264 | 3.09 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 36 | Cycle | Base Substitution | 39099 | 59.17 | 28.00 | 27.87 | 0.13 | After |
| REGRESSION.HCC1395_tumor.L002 | 36 | Cycle | Base Insertion | 39096 | 3.48 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 36 | Cycle | Base Deletion | 39096 | 3.99 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 37 | Cycle | Base Substitution | 39259 | 45.84 | 29.00 | 28.47 | 0.53 | After |
| REGRESSION.HCC1395_tumor.L002 | 37 | Cycle | Base Insertion | 39257 | 2.18 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 37 | Cycle | Base Deletion | 39257 | 3.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 38 | Cycle | Base Substitution | 39130 | 34.21 | 29.00 | 27.75 | 1.25 | After |
| REGRESSION.HCC1395_tumor.L002 | 38 | Cycle | Base Insertion | 39128 | 3.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 38 | Cycle | Base Deletion | 39128 | 3.55 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 39 | Cycle | Base Substitution | 39185 | 44.66 | 29.00 | 28.02 | 0.98 | After |
| REGRESSION.HCC1395_tumor.L002 | 39 | Cycle | Base Insertion | 39183 | 2.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 39 | Cycle | Base Deletion | 39183 | 4.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 4 | Cycle | Base Substitution | 39579 | 61.32 | 27.00 | 27.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 40 | Cycle | Base Substitution | 39288 | 44.36 | 29.00 | 27.86 | 1.14 | After |
| REGRESSION.HCC1395_tumor.L002 | 40 | Cycle | Base Insertion | 39285 | 2.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 40 | Cycle | Base Deletion | 39285 | 3.48 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 41 | Cycle | Base Substitution | 39135 | 57.96 | 28.00 | 27.70 | 0.30 | After |
| REGRESSION.HCC1395_tumor.L002 | 41 | Cycle | Base Insertion | 39132 | 1.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 41 | Cycle | Base Deletion | 39132 | 3.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 42 | Cycle | Base Substitution | 39215 | 33.05 | 29.00 | 27.68 | 1.32 | After |
| REGRESSION.HCC1395_tumor.L002 | 42 | Cycle | Base Insertion | 39211 | 1.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 42 | Cycle | Base Deletion | 39211 | 3.37 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 43 | Cycle | Base Substitution | 38984 | 51.12 | 28.00 | 27.60 | 0.40 | After |
| REGRESSION.HCC1395_tumor.L002 | 43 | Cycle | Base Insertion | 38976 | 1.42 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 43 | Cycle | Base Deletion | 38976 | 3.72 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 44 | Cycle | Base Substitution | 39150 | 43.33 | 29.00 | 27.91 | 1.09 | After |
| REGRESSION.HCC1395_tumor.L002 | 44 | Cycle | Base Insertion | 39140 | 1.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 44 | Cycle | Base Deletion | 39140 | 3.48 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 45 | Cycle | Base Substitution | 39154 | 51.57 | 28.00 | 27.61 | 0.39 | After |
| REGRESSION.HCC1395_tumor.L002 | 45 | Cycle | Base Insertion | 39141 | 3.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 45 | Cycle | Base Deletion | 39141 | 4.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 46 | Cycle | Base Substitution | 39241 | 37.98 | 29.00 | 27.93 | 1.07 | After |
| REGRESSION.HCC1395_tumor.L002 | 46 | Cycle | Base Insertion | 39228 | 3.46 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 46 | Cycle | Base Deletion | 39228 | 5.29 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 47 | Cycle | Base Substitution | 39142 | 55.97 | 28.00 | 27.58 | 0.42 | After |
| REGRESSION.HCC1395_tumor.L002 | 47 | Cycle | Base Insertion | 39131 | 4.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 47 | Cycle | Base Deletion | 39131 | 4.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 48 | Cycle | Base Substitution | 39003 | 40.01 | 29.00 | 27.62 | 1.38 | After |
| REGRESSION.HCC1395_tumor.L002 | 48 | Cycle | Base Insertion | 38990 | 2.07 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 48 | Cycle | Base Deletion | 38990 | 4.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 49 | Cycle | Base Substitution | 38965 | 39.46 | 29.00 | 27.66 | 1.34 | After |
| REGRESSION.HCC1395_tumor.L002 | 49 | Cycle | Base Insertion | 38945 | 2.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 49 | Cycle | Base Deletion | 38945 | 5.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 5 | Cycle | Base Substitution | 39677 | 44.39 | 29.00 | 27.64 | 1.36 | After |
| REGRESSION.HCC1395_tumor.L002 | 5 | Cycle | Base Insertion | 39677 | 1.99 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 5 | Cycle | Base Deletion | 39677 | 0.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 50 | Cycle | Base Substitution | 39016 | 45.73 | 28.00 | 27.80 | 0.20 | After |
| REGRESSION.HCC1395_tumor.L002 | 50 | Cycle | Base Insertion | 38993 | 1.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 50 | Cycle | Base Deletion | 38993 | 4.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 51 | Cycle | Base Substitution | 39037 | 56.15 | 28.00 | 27.85 | 0.15 | After |
| REGRESSION.HCC1395_tumor.L002 | 51 | Cycle | Base Insertion | 39006 | 1.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 51 | Cycle | Base Deletion | 39006 | 3.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 52 | Cycle | Base Substitution | 39003 | 52.49 | 28.00 | 27.55 | 0.45 | After |
| REGRESSION.HCC1395_tumor.L002 | 52 | Cycle | Base Insertion | 38973 | 1.98 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 52 | Cycle | Base Deletion | 38973 | 5.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 53 | Cycle | Base Substitution | 39074 | 56.39 | 28.00 | 27.64 | 0.36 | After |
| REGRESSION.HCC1395_tumor.L002 | 53 | Cycle | Base Insertion | 39039 | 4.21 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 53 | Cycle | Base Deletion | 39039 | 4.02 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 54 | Cycle | Base Substitution | 39132 | 61.08 | 28.00 | 27.90 | 0.10 | After |
| REGRESSION.HCC1395_tumor.L002 | 54 | Cycle | Base Insertion | 39101 | 3.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 54 | Cycle | Base Deletion | 39101 | 4.57 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 55 | Cycle | Base Substitution | 38981 | 44.48 | 29.00 | 27.84 | 1.16 | After |
| REGRESSION.HCC1395_tumor.L002 | 55 | Cycle | Base Insertion | 38946 | 3.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 55 | Cycle | Base Deletion | 38946 | 4.61 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 56 | Cycle | Base Substitution | 38872 | 51.83 | 28.00 | 27.50 | 0.50 | After |
| REGRESSION.HCC1395_tumor.L002 | 56 | Cycle | Base Insertion | 38835 | 2.47 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 56 | Cycle | Base Deletion | 38835 | 4.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 57 | Cycle | Base Substitution | 38816 | 61.25 | 27.00 | 26.86 | 0.14 | After |
| REGRESSION.HCC1395_tumor.L002 | 57 | Cycle | Base Insertion | 38765 | 3.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 57 | Cycle | Base Deletion | 38765 | 4.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 58 | Cycle | Base Substitution | 38928 | 42.44 | 29.00 | 27.46 | 1.54 | After |
| REGRESSION.HCC1395_tumor.L002 | 58 | Cycle | Base Insertion | 38859 | 2.30 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 58 | Cycle | Base Deletion | 38859 | 4.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 59 | Cycle | Base Substitution | 38870 | 42.49 | 29.00 | 27.51 | 1.49 | After |
| REGRESSION.HCC1395_tumor.L002 | 59 | Cycle | Base Insertion | 38800 | 1.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 59 | Cycle | Base Deletion | 38800 | 4.81 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 6 | Cycle | Base Substitution | 39549 | 44.95 | 29.00 | 28.13 | 0.87 | After |
| REGRESSION.HCC1395_tumor.L002 | 6 | Cycle | Base Insertion | 39549 | 3.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 6 | Cycle | Base Deletion | 39549 | 1.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 60 | Cycle | Base Substitution | 38897 | 42.17 | 29.00 | 27.82 | 1.18 | After |
| REGRESSION.HCC1395_tumor.L002 | 60 | Cycle | Base Insertion | 38820 | 1.86 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 60 | Cycle | Base Deletion | 38820 | 4.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 61 | Cycle | Base Substitution | 38784 | 47.14 | 28.00 | 27.62 | 0.38 | After |
| REGRESSION.HCC1395_tumor.L002 | 61 | Cycle | Base Insertion | 38704 | 1.51 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 61 | Cycle | Base Deletion | 38704 | 5.09 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 62 | Cycle | Base Substitution | 38711 | 42.32 | 29.00 | 27.39 | 1.61 | After |
| REGRESSION.HCC1395_tumor.L002 | 62 | Cycle | Base Insertion | 38627 | 3.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 62 | Cycle | Base Deletion | 38627 | 3.88 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 63 | Cycle | Base Substitution | 38782 | 60.87 | 28.00 | 27.46 | 0.54 | After |
| REGRESSION.HCC1395_tumor.L002 | 63 | Cycle | Base Insertion | 38706 | 1.86 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 63 | Cycle | Base Deletion | 38706 | 3.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 64 | Cycle | Base Substitution | 38770 | 57.17 | 28.00 | 27.46 | 0.54 | After |
| REGRESSION.HCC1395_tumor.L002 | 64 | Cycle | Base Insertion | 38689 | 1.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 64 | Cycle | Base Deletion | 38689 | 3.57 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 65 | Cycle | Base Substitution | 38745 | 47.93 | 28.00 | 27.50 | 0.50 | After |
| REGRESSION.HCC1395_tumor.L002 | 65 | Cycle | Base Insertion | 38650 | 2.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 65 | Cycle | Base Deletion | 38650 | 3.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 66 | Cycle | Base Substitution | 38772 | 42.27 | 29.00 | 27.44 | 1.56 | After |
| REGRESSION.HCC1395_tumor.L002 | 66 | Cycle | Base Insertion | 38680 | 4.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 66 | Cycle | Base Deletion | 38680 | 3.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 67 | Cycle | Base Substitution | 38731 | 52.96 | 28.00 | 27.35 | 0.65 | After |
| REGRESSION.HCC1395_tumor.L002 | 67 | Cycle | Base Insertion | 38629 | 2.72 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 67 | Cycle | Base Deletion | 38629 | 4.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 68 | Cycle | Base Substitution | 38651 | 60.14 | 28.00 | 27.17 | 0.83 | After |
| REGRESSION.HCC1395_tumor.L002 | 68 | Cycle | Base Insertion | 38540 | 3.36 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 68 | Cycle | Base Deletion | 38540 | 5.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 69 | Cycle | Base Substitution | 38603 | 46.91 | 28.00 | 27.79 | 0.21 | After |
| REGRESSION.HCC1395_tumor.L002 | 69 | Cycle | Base Insertion | 38491 | 4.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 69 | Cycle | Base Deletion | 38491 | 4.56 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 7 | Cycle | Base Substitution | 39501 | 48.16 | 28.00 | 27.30 | 0.70 | After |
| REGRESSION.HCC1395_tumor.L002 | 7 | Cycle | Base Insertion | 39501 | 0.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 7 | Cycle | Base Deletion | 39501 | 1.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 70 | Cycle | Base Substitution | 38679 | 49.53 | 28.00 | 27.40 | 0.60 | After |
| REGRESSION.HCC1395_tumor.L002 | 70 | Cycle | Base Insertion | 38570 | 3.26 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 70 | Cycle | Base Deletion | 38570 | 4.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 71 | Cycle | Base Substitution | 38602 | 59.44 | 28.00 | 27.37 | 0.63 | After |
| REGRESSION.HCC1395_tumor.L002 | 71 | Cycle | Base Insertion | 38482 | 2.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 71 | Cycle | Base Deletion | 38482 | 5.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 72 | Cycle | Base Substitution | 38562 | 57.97 | 28.00 | 27.31 | 0.69 | After |
| REGRESSION.HCC1395_tumor.L002 | 72 | Cycle | Base Insertion | 38429 | 3.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 72 | Cycle | Base Deletion | 38429 | 4.48 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 73 | Cycle | Base Substitution | 38582 | 67.63 | 27.00 | 27.14 | -0.14 | After |
| REGRESSION.HCC1395_tumor.L002 | 73 | Cycle | Base Insertion | 38450 | 2.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 73 | Cycle | Base Deletion | 38450 | 4.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 74 | Cycle | Base Substitution | 38436 | 69.05 | 27.00 | 27.10 | -0.10 | After |
| REGRESSION.HCC1395_tumor.L002 | 74 | Cycle | Base Insertion | 38296 | 1.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 74 | Cycle | Base Deletion | 38296 | 4.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 75 | Cycle | Base Substitution | 38503 | 51.28 | 28.00 | 27.26 | 0.74 | After |
| REGRESSION.HCC1395_tumor.L002 | 75 | Cycle | Base Insertion | 38344 | 2.61 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 75 | Cycle | Base Deletion | 38344 | 4.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 76 | Cycle | Base Substitution | 38422 | 55.18 | 28.00 | 27.26 | 0.74 | After |
| REGRESSION.HCC1395_tumor.L002 | 76 | Cycle | Base Insertion | 38280 | 2.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 76 | Cycle | Base Deletion | 38280 | 4.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 77 | Cycle | Base Substitution | 38276 | 71.64 | 27.00 | 26.63 | 0.37 | After |
| REGRESSION.HCC1395_tumor.L002 | 77 | Cycle | Base Insertion | 38119 | 0.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 77 | Cycle | Base Deletion | 38119 | 4.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 78 | Cycle | Base Substitution | 38263 | 61.14 | 28.00 | 27.14 | 0.86 | After |
| REGRESSION.HCC1395_tumor.L002 | 78 | Cycle | Base Insertion | 38089 | 0.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 78 | Cycle | Base Deletion | 38089 | 4.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 79 | Cycle | Base Substitution | 38255 | 62.68 | 28.00 | 27.10 | 0.90 | After |
| REGRESSION.HCC1395_tumor.L002 | 79 | Cycle | Base Insertion | 38078 | 1.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 79 | Cycle | Base Deletion | 38078 | 4.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 8 | Cycle | Base Substitution | 39519 | 35.00 | 29.00 | 28.08 | 0.92 | After |
| REGRESSION.HCC1395_tumor.L002 | 8 | Cycle | Base Insertion | 39519 | 1.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 8 | Cycle | Base Deletion | 39519 | 1.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 80 | Cycle | Base Substitution | 38146 | 63.53 | 28.00 | 27.15 | 0.85 | After |
| REGRESSION.HCC1395_tumor.L002 | 80 | Cycle | Base Insertion | 37949 | 1.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 80 | Cycle | Base Deletion | 37949 | 4.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 81 | Cycle | Base Substitution | 38148 | 63.51 | 28.00 | 27.15 | 0.85 | After |
| REGRESSION.HCC1395_tumor.L002 | 81 | Cycle | Base Insertion | 37934 | 1.57 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 81 | Cycle | Base Deletion | 37934 | 4.44 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 82 | Cycle | Base Substitution | 38042 | 67.76 | 27.00 | 27.12 | -0.12 | After |
| REGRESSION.HCC1395_tumor.L002 | 82 | Cycle | Base Insertion | 37839 | 1.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 82 | Cycle | Base Deletion | 37839 | 3.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 83 | Cycle | Base Substitution | 38010 | 51.41 | 28.00 | 27.06 | 0.94 | After |
| REGRESSION.HCC1395_tumor.L002 | 83 | Cycle | Base Insertion | 37803 | 1.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 83 | Cycle | Base Deletion | 37803 | 4.47 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 84 | Cycle | Base Substitution | 38022 | 57.83 | 28.00 | 27.05 | 0.95 | After |
| REGRESSION.HCC1395_tumor.L002 | 84 | Cycle | Base Insertion | 37822 | 2.09 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 84 | Cycle | Base Deletion | 37822 | 4.99 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 85 | Cycle | Base Substitution | 37918 | 67.93 | 27.00 | 26.92 | 0.08 | After |
| REGRESSION.HCC1395_tumor.L002 | 85 | Cycle | Base Insertion | 37700 | 3.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 85 | Cycle | Base Deletion | 37700 | 5.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 86 | Cycle | Base Substitution | 37874 | 66.84 | 27.00 | 27.06 | -0.06 | After |
| REGRESSION.HCC1395_tumor.L002 | 86 | Cycle | Base Insertion | 37650 | 1.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 86 | Cycle | Base Deletion | 37650 | 4.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 87 | Cycle | Base Substitution | 37952 | 64.11 | 27.00 | 26.86 | 0.14 | After |
| REGRESSION.HCC1395_tumor.L002 | 87 | Cycle | Base Insertion | 37714 | 1.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 87 | Cycle | Base Deletion | 37714 | 4.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 88 | Cycle | Base Substitution | 37767 | 52.64 | 28.00 | 27.33 | 0.67 | After |
| REGRESSION.HCC1395_tumor.L002 | 88 | Cycle | Base Insertion | 37518 | 1.02 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 88 | Cycle | Base Deletion | 37518 | 4.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 89 | Cycle | Base Substitution | 37688 | 62.47 | 27.00 | 26.90 | 0.10 | After |
| REGRESSION.HCC1395_tumor.L002 | 89 | Cycle | Base Insertion | 37433 | 1.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 89 | Cycle | Base Deletion | 37433 | 4.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 9 | Cycle | Base Substitution | 39420 | 30.22 | 30.00 | 28.08 | 1.92 | After |
| REGRESSION.HCC1395_tumor.L002 | 9 | Cycle | Base Insertion | 39420 | 1.10 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 9 | Cycle | Base Deletion | 39420 | 1.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 90 | Cycle | Base Substitution | 37654 | 63.32 | 27.00 | 26.91 | 0.09 | After |
| REGRESSION.HCC1395_tumor.L002 | 90 | Cycle | Base Insertion | 37399 | 0.64 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 90 | Cycle | Base Deletion | 37399 | 5.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 91 | Cycle | Base Substitution | 37494 | 68.14 | 27.00 | 26.74 | 0.26 | After |
| REGRESSION.HCC1395_tumor.L002 | 91 | Cycle | Base Insertion | 37254 | 0.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 91 | Cycle | Base Deletion | 37254 | 4.55 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 92 | Cycle | Base Substitution | 37476 | 63.45 | 28.00 | 27.08 | 0.92 | After |
| REGRESSION.HCC1395_tumor.L002 | 92 | Cycle | Base Insertion | 37241 | 1.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 92 | Cycle | Base Deletion | 37241 | 4.48 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 93 | Cycle | Base Substitution | 37535 | 72.54 | 27.00 | 26.90 | 0.10 | After |
| REGRESSION.HCC1395_tumor.L002 | 93 | Cycle | Base Insertion | 37281 | 1.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 93 | Cycle | Base Deletion | 37281 | 3.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 94 | Cycle | Base Substitution | 37428 | 78.48 | 27.00 | 26.82 | 0.18 | After |
| REGRESSION.HCC1395_tumor.L002 | 94 | Cycle | Base Insertion | 37174 | 1.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 94 | Cycle | Base Deletion | 37174 | 3.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 95 | Cycle | Base Substitution | 37317 | 59.06 | 27.00 | 26.71 | 0.29 | After |
| REGRESSION.HCC1395_tumor.L002 | 95 | Cycle | Base Insertion | 37067 | 3.37 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 95 | Cycle | Base Deletion | 37067 | 4.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 96 | Cycle | Base Substitution | 37280 | 67.44 | 27.00 | 26.63 | 0.37 | After |
| REGRESSION.HCC1395_tumor.L002 | 96 | Cycle | Base Insertion | 37000 | 2.55 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 96 | Cycle | Base Deletion | 37000 | 4.31 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 97 | Cycle | Base Substitution | 37204 | 58.18 | 27.00 | 26.83 | 0.17 | After |
| REGRESSION.HCC1395_tumor.L002 | 97 | Cycle | Base Insertion | 36938 | 1.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 97 | Cycle | Base Deletion | 36938 | 4.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 98 | Cycle | Base Substitution | 37099 | 59.92 | 28.00 | 27.03 | 0.97 | After |
| REGRESSION.HCC1395_tumor.L002 | 98 | Cycle | Base Insertion | 36807 | 1.77 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 98 | Cycle | Base Deletion | 36807 | 4.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 99 | Cycle | Base Substitution | 36980 | 64.18 | 27.00 | 26.97 | 0.03 | After |
| REGRESSION.HCC1395_tumor.L002 | 99 | Cycle | Base Insertion | 36676 | 2.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 99 | Cycle | Base Deletion | 36676 | 3.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 10 | QualityScore | Base Substitution | 15322 | 1511.30 | 10.00 | 10.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 11 | QualityScore | Base Substitution | 15582 | 1125.36 | 11.00 | 11.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 12 | QualityScore | Base Substitution | 20835 | 1232.85 | 12.00 | 12.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 13 | QualityScore | Base Substitution | 7175 | 77.60 | 17.00 | 13.00 | 4.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 14 | QualityScore | Base Substitution | 25054 | 351.16 | 18.00 | 14.00 | 4.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 15 | QualityScore | Base Substitution | 17920 | 13.85 | 22.00 | 15.00 | 7.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 16 | QualityScore | Base Substitution | 14677 | 3.91 | 22.00 | 16.00 | 6.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 22 | QualityScore | Base Substitution | 8187 | 2.18 | 24.00 | 22.00 | 2.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 23 | QualityScore | Base Substitution | 101773 | 667.03 | 22.00 | 23.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 24 | QualityScore | Base Substitution | 109587 | 394.31 | 24.00 | 24.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 25 | QualityScore | Base Substitution | 128682 | 206.44 | 27.00 | 25.00 | 2.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 28 | QualityScore | Base Substitution | 7978 | 0.09 | 29.00 | 28.00 | 1.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 29 | QualityScore | Base Substitution | 69319 | 117.60 | 28.00 | 29.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 30 | QualityScore | Base Substitution | 2517962 | 1547.84 | 32.00 | 30.00 | 2.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 31 | QualityScore | Base Substitution | 2906897 | 1298.24 | 33.00 | 31.00 | 2.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 32 | QualityScore | Base Substitution | 4709800 | 1122.41 | 36.00 | 32.00 | 4.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 33 | QualityScore | Base Substitution | 438225 | 80.05 | 35.00 | 33.00 | 2.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 45 | QualityScore | Base Insertion | 11182629 | 526.88 | 43.00 | 45.00 | -2.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 45 | QualityScore | Base Deletion | 11182629 | 992.82 | 41.00 | 45.00 | -4.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 7 | QualityScore | Base Substitution | 563 | 124.05 | 7.00 | 7.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 8 | QualityScore | Base Substitution | 11610 | 1965.35 | 8.00 | 8.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L002 | 9 | QualityScore | Base Substitution | 55481 | 7346.49 | 9.00 | 9.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | AA | Context | Base Substitution | 830469 | 1886.02 | 26.00 | 24.93 | 1.07 | After |
| REGRESSION.HCC1395_tumor.L003 | AAA | Context | Base Insertion | 294625 | 61.67 | 42.00 | 45.00 | -3.00 | After |
| REGRESSION.HCC1395_tumor.L003 | AAA | Context | Base Deletion | 294625 | 185.86 | 37.00 | 45.00 | -8.00 | After |
| REGRESSION.HCC1395_tumor.L003 | AAC | Context | Base Insertion | 131454 | 4.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | AAC | Context | Base Deletion | 131454 | 9.48 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | AAG | Context | Base Insertion | 198042 | 7.44 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | AAG | Context | Base Deletion | 198042 | 7.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | AAT | Context | Base Insertion | 172276 | 0.51 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | AAT | Context | Base Deletion | 172276 | 14.95 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L003 | AC | Context | Base Substitution | 529998 | 1816.79 | 25.00 | 24.72 | 0.28 | After |
| REGRESSION.HCC1395_tumor.L003 | ACA | Context | Base Insertion | 204322 | 16.98 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L003 | ACA | Context | Base Deletion | 204322 | 36.76 | 43.00 | 45.00 | -2.00 | After |
| REGRESSION.HCC1395_tumor.L003 | ACC | Context | Base Insertion | 146153 | 10.29 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | ACC | Context | Base Deletion | 146153 | 5.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | ACG | Context | Base Insertion | 30777 | 0.99 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | ACG | Context | Base Deletion | 30777 | 2.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | ACT | Context | Base Insertion | 157349 | 1.21 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | ACT | Context | Base Deletion | 157349 | 12.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | AG | Context | Base Substitution | 798890 | 623.03 | 31.00 | 28.67 | 2.33 | After |
| REGRESSION.HCC1395_tumor.L003 | AGA | Context | Base Insertion | 221578 | 5.99 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | AGA | Context | Base Deletion | 221578 | 11.21 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | AGC | Context | Base Insertion | 192393 | 1.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | AGC | Context | Base Deletion | 192393 | 5.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | AGG | Context | Base Insertion | 227481 | 12.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | AGG | Context | Base Deletion | 227481 | 9.02 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | AGT | Context | Base Insertion | 153915 | 2.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | AGT | Context | Base Deletion | 153915 | 4.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | AT | Context | Base Substitution | 599866 | 625.59 | 30.00 | 27.54 | 2.46 | After |
| REGRESSION.HCC1395_tumor.L003 | ATA | Context | Base Insertion | 134351 | 8.95 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | ATA | Context | Base Deletion | 134351 | 4.17 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | ATC | Context | Base Insertion | 120534 | 1.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | ATC | Context | Base Deletion | 120534 | 8.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | ATG | Context | Base Insertion | 173962 | 3.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | ATG | Context | Base Deletion | 173962 | 1.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | ATT | Context | Base Insertion | 181392 | 4.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | ATT | Context | Base Deletion | 181392 | 9.44 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | CA | Context | Base Substitution | 853652 | 1831.72 | 27.00 | 26.34 | 0.66 | After |
| REGRESSION.HCC1395_tumor.L003 | CAA | Context | Base Insertion | 170656 | 8.30 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | CAA | Context | Base Deletion | 170656 | 12.85 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | CAC | Context | Base Insertion | 183571 | 21.44 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L003 | CAC | Context | Base Deletion | 183571 | 35.79 | 43.00 | 45.00 | -2.00 | After |
| REGRESSION.HCC1395_tumor.L003 | CAG | Context | Base Insertion | 291462 | 9.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | CAG | Context | Base Deletion | 291462 | 11.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | CAT | Context | Base Insertion | 170135 | 7.37 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | CAT | Context | Base Deletion | 170135 | 7.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | CC | Context | Base Substitution | 763466 | 2441.09 | 25.00 | 24.57 | 0.43 | After |
| REGRESSION.HCC1395_tumor.L003 | CCA | Context | Base Insertion | 244339 | 7.79 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | CCA | Context | Base Deletion | 244339 | 8.37 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | CCC | Context | Base Insertion | 212010 | 14.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | CCC | Context | Base Deletion | 212010 | 18.73 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L003 | CCG | Context | Base Insertion | 53994 | 1.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | CCG | Context | Base Deletion | 53994 | 6.26 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | CCT | Context | Base Insertion | 242660 | 3.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | CCT | Context | Base Deletion | 242660 | 11.56 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | CG | Context | Base Substitution | 161591 | 515.61 | 25.00 | 24.72 | 0.28 | After |
| REGRESSION.HCC1395_tumor.L003 | CGA | Context | Base Insertion | 56463 | 1.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | CGA | Context | Base Deletion | 56463 | 0.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | CGC | Context | Base Insertion | 80428 | 1.48 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | CGC | Context | Base Deletion | 80428 | 5.30 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | CGG | Context | Base Insertion | 98604 | 2.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | CGG | Context | Base Deletion | 98604 | 11.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | CGT | Context | Base Insertion | 62491 | 1.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | CGT | Context | Base Deletion | 62491 | 3.17 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | CT | Context | Base Substitution | 838314 | 366.30 | 33.00 | 29.57 | 3.43 | After |
| REGRESSION.HCC1395_tumor.L003 | CTA | Context | Base Insertion | 96802 | 0.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | CTA | Context | Base Deletion | 96802 | 7.17 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | CTC | Context | Base Insertion | 201718 | 8.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | CTC | Context | Base Deletion | 201718 | 17.99 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L003 | CTG | Context | Base Insertion | 291491 | 2.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | CTG | Context | Base Deletion | 291491 | 14.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | CTT | Context | Base Insertion | 209989 | 10.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | CTT | Context | Base Deletion | 209989 | 9.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | GA | Context | Base Substitution | 699481 | 997.52 | 28.00 | 26.53 | 1.47 | After |
| REGRESSION.HCC1395_tumor.L003 | GAA | Context | Base Insertion | 208511 | 6.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | GAA | Context | Base Deletion | 208511 | 8.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | GAC | Context | Base Insertion | 117773 | 3.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | GAC | Context | Base Deletion | 117773 | 3.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | GAG | Context | Base Insertion | 206382 | 3.02 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | GAG | Context | Base Deletion | 206382 | 12.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | GAT | Context | Base Insertion | 125023 | 2.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | GAT | Context | Base Deletion | 125023 | 5.30 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | GC | Context | Base Substitution | 662626 | 1473.40 | 27.00 | 25.90 | 1.10 | After |
| REGRESSION.HCC1395_tumor.L003 | GCA | Context | Base Insertion | 203875 | 5.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | GCA | Context | Base Deletion | 203875 | 7.30 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | GCC | Context | Base Insertion | 199120 | 3.51 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | GCC | Context | Base Deletion | 199120 | 9.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | GCG | Context | Base Insertion | 49212 | 1.61 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | GCG | Context | Base Deletion | 49212 | 7.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | GCT | Context | Base Insertion | 209495 | 4.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | GCT | Context | Base Deletion | 209495 | 4.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | GG | Context | Base Substitution | 790565 | 769.83 | 30.00 | 27.63 | 2.37 | After |
| REGRESSION.HCC1395_tumor.L003 | GGA | Context | Base Insertion | 213764 | 22.99 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L003 | GGA | Context | Base Deletion | 213764 | 14.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | GGC | Context | Base Insertion | 197048 | 3.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | GGC | Context | Base Deletion | 197048 | 9.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | GGG | Context | Base Insertion | 218778 | 14.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | GGG | Context | Base Deletion | 218778 | 33.87 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L003 | GGT | Context | Base Insertion | 158359 | 2.29 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | GGT | Context | Base Deletion | 158359 | 5.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | GT | Context | Base Substitution | 588215 | 1071.25 | 27.00 | 26.85 | 0.15 | After |
| REGRESSION.HCC1395_tumor.L003 | GTA | Context | Base Insertion | 101748 | 0.94 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | GTA | Context | Base Deletion | 101748 | 3.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | GTC | Context | Base Insertion | 126273 | 1.73 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | GTC | Context | Base Deletion | 126273 | 4.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | GTG | Context | Base Insertion | 198971 | 12.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | GTG | Context | Base Deletion | 198971 | 34.02 | 43.00 | 45.00 | -2.00 | After |
| REGRESSION.HCC1395_tumor.L003 | GTT | Context | Base Insertion | 148644 | 2.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | GTT | Context | Base Deletion | 148644 | 14.64 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L003 | TA | Context | Base Substitution | 483931 | 1177.89 | 26.00 | 25.02 | 0.98 | After |
| REGRESSION.HCC1395_tumor.L003 | TAA | Context | Base Insertion | 149567 | 9.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | TAA | Context | Base Deletion | 149567 | 14.58 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L003 | TAC | Context | Base Insertion | 93857 | 1.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | TAC | Context | Base Deletion | 93857 | 4.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | TAG | Context | Base Insertion | 96933 | 2.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | TAG | Context | Base Deletion | 96933 | 1.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | TAT | Context | Base Insertion | 128025 | 2.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | TAT | Context | Base Deletion | 128025 | 4.61 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | TC | Context | Base Substitution | 645842 | 1618.77 | 26.00 | 26.08 | -0.08 | After |
| REGRESSION.HCC1395_tumor.L003 | TCA | Context | Base Insertion | 194505 | 6.29 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | TCA | Context | Base Deletion | 194505 | 14.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | TCC | Context | Base Insertion | 201051 | 32.38 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L003 | TCC | Context | Base Deletion | 201051 | 11.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | TCG | Context | Base Insertion | 26390 | 0.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | TCG | Context | Base Deletion | 26390 | 0.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | TCT | Context | Base Insertion | 223081 | 5.57 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | TCT | Context | Base Deletion | 223081 | 13.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | TG | Context | Base Substitution | 840490 | 366.42 | 33.00 | 29.35 | 3.65 | After |
| REGRESSION.HCC1395_tumor.L003 | TGA | Context | Base Insertion | 202273 | 4.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | TGA | Context | Base Deletion | 202273 | 6.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | TGC | Context | Base Insertion | 188587 | 2.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | TGC | Context | Base Deletion | 188587 | 4.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | TGG | Context | Base Insertion | 239988 | 3.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | TGG | Context | Base Deletion | 239988 | 8.88 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | TGT | Context | Base Insertion | 209585 | 13.10 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | TGT | Context | Base Deletion | 209585 | 36.84 | 43.00 | 45.00 | -2.00 | After |
| REGRESSION.HCC1395_tumor.L003 | TT | Context | Base Substitution | 840052 | 921.16 | 30.00 | 28.18 | 1.82 | After |
| REGRESSION.HCC1395_tumor.L003 | TTA | Context | Base Insertion | 147416 | 5.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | TTA | Context | Base Deletion | 147416 | 7.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | TTC | Context | Base Insertion | 193422 | 6.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | TTC | Context | Base Deletion | 193422 | 11.96 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | TTG | Context | Base Insertion | 170100 | 1.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | TTG | Context | Base Deletion | 170100 | 8.81 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | TTT | Context | Base Insertion | 294367 | 62.75 | 42.00 | 45.00 | -3.00 | After |
| REGRESSION.HCC1395_tumor.L003 | TTT | Context | Base Deletion | 294367 | 166.35 | 38.00 | 45.00 | -7.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -1 | Cycle | Base Substitution | 38397 | 138.28 | 24.00 | 24.13 | -0.13 | After |
| REGRESSION.HCC1395_tumor.L003 | -10 | Cycle | Base Substitution | 38656 | 50.24 | 28.00 | 27.57 | 0.43 | After |
| REGRESSION.HCC1395_tumor.L003 | -10 | Cycle | Base Insertion | 38656 | 0.77 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -10 | Cycle | Base Deletion | 38656 | 2.61 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -100 | Cycle | Base Substitution | 36317 | 90.84 | 26.00 | 26.02 | -0.02 | After |
| REGRESSION.HCC1395_tumor.L003 | -100 | Cycle | Base Insertion | 36017 | 2.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -100 | Cycle | Base Deletion | 36017 | 5.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -101 | Cycle | Base Substitution | 36296 | 96.97 | 26.00 | 25.61 | 0.39 | After |
| REGRESSION.HCC1395_tumor.L003 | -101 | Cycle | Base Insertion | 35989 | 1.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -101 | Cycle | Base Deletion | 35989 | 3.98 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -102 | Cycle | Base Substitution | 36124 | 78.77 | 27.00 | 26.36 | 0.64 | After |
| REGRESSION.HCC1395_tumor.L003 | -102 | Cycle | Base Insertion | 35824 | 1.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -102 | Cycle | Base Deletion | 35824 | 3.30 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -103 | Cycle | Base Substitution | 36092 | 68.28 | 27.00 | 26.34 | 0.66 | After |
| REGRESSION.HCC1395_tumor.L003 | -103 | Cycle | Base Insertion | 35784 | 2.51 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -103 | Cycle | Base Deletion | 35784 | 3.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -104 | Cycle | Base Substitution | 35975 | 73.00 | 27.00 | 26.42 | 0.58 | After |
| REGRESSION.HCC1395_tumor.L003 | -104 | Cycle | Base Insertion | 35674 | 3.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -104 | Cycle | Base Deletion | 35674 | 3.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -105 | Cycle | Base Substitution | 35849 | 91.70 | 26.00 | 26.35 | -0.35 | After |
| REGRESSION.HCC1395_tumor.L003 | -105 | Cycle | Base Insertion | 35530 | 2.94 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -105 | Cycle | Base Deletion | 35530 | 3.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -106 | Cycle | Base Substitution | 35796 | 92.67 | 26.00 | 26.37 | -0.37 | After |
| REGRESSION.HCC1395_tumor.L003 | -106 | Cycle | Base Insertion | 35479 | 3.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -106 | Cycle | Base Deletion | 35479 | 3.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -107 | Cycle | Base Substitution | 35778 | 79.65 | 26.00 | 26.22 | -0.22 | After |
| REGRESSION.HCC1395_tumor.L003 | -107 | Cycle | Base Insertion | 35463 | 1.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -107 | Cycle | Base Deletion | 35463 | 2.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -108 | Cycle | Base Substitution | 35701 | 79.69 | 26.00 | 26.35 | -0.35 | After |
| REGRESSION.HCC1395_tumor.L003 | -108 | Cycle | Base Insertion | 35371 | 2.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -108 | Cycle | Base Deletion | 35371 | 2.51 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -109 | Cycle | Base Substitution | 35672 | 86.40 | 26.00 | 25.72 | 0.28 | After |
| REGRESSION.HCC1395_tumor.L003 | -109 | Cycle | Base Insertion | 35344 | 1.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -109 | Cycle | Base Deletion | 35344 | 3.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -11 | Cycle | Base Substitution | 38748 | 39.73 | 29.00 | 27.82 | 1.18 | After |
| REGRESSION.HCC1395_tumor.L003 | -11 | Cycle | Base Insertion | 38748 | 1.44 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -11 | Cycle | Base Deletion | 38748 | 2.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -110 | Cycle | Base Substitution | 35569 | 95.04 | 26.00 | 25.63 | 0.37 | After |
| REGRESSION.HCC1395_tumor.L003 | -110 | Cycle | Base Insertion | 35239 | 0.81 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -110 | Cycle | Base Deletion | 35239 | 3.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -111 | Cycle | Base Substitution | 35398 | 89.10 | 26.00 | 25.73 | 0.27 | After |
| REGRESSION.HCC1395_tumor.L003 | -111 | Cycle | Base Insertion | 35071 | 1.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -111 | Cycle | Base Deletion | 35071 | 4.57 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -112 | Cycle | Base Substitution | 35346 | 76.40 | 27.00 | 26.20 | 0.80 | After |
| REGRESSION.HCC1395_tumor.L003 | -112 | Cycle | Base Insertion | 35016 | 1.29 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -112 | Cycle | Base Deletion | 35016 | 4.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -113 | Cycle | Base Substitution | 35319 | 82.05 | 26.00 | 26.49 | -0.49 | After |
| REGRESSION.HCC1395_tumor.L003 | -113 | Cycle | Base Insertion | 34984 | 2.77 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -113 | Cycle | Base Deletion | 34984 | 3.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -114 | Cycle | Base Substitution | 35205 | 89.36 | 26.00 | 26.52 | -0.52 | After |
| REGRESSION.HCC1395_tumor.L003 | -114 | Cycle | Base Insertion | 34875 | 1.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -114 | Cycle | Base Deletion | 34875 | 4.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -115 | Cycle | Base Substitution | 34997 | 87.12 | 26.00 | 26.35 | -0.35 | After |
| REGRESSION.HCC1395_tumor.L003 | -115 | Cycle | Base Insertion | 34640 | 2.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -115 | Cycle | Base Deletion | 34640 | 4.18 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -116 | Cycle | Base Substitution | 35042 | 84.68 | 26.00 | 25.56 | 0.44 | After |
| REGRESSION.HCC1395_tumor.L003 | -116 | Cycle | Base Insertion | 34695 | 1.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -116 | Cycle | Base Deletion | 34695 | 3.85 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -117 | Cycle | Base Substitution | 34781 | 96.47 | 26.00 | 26.14 | -0.14 | After |
| REGRESSION.HCC1395_tumor.L003 | -117 | Cycle | Base Insertion | 34429 | 1.38 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -117 | Cycle | Base Deletion | 34429 | 3.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -118 | Cycle | Base Substitution | 34710 | 77.21 | 26.00 | 26.53 | -0.53 | After |
| REGRESSION.HCC1395_tumor.L003 | -118 | Cycle | Base Insertion | 34348 | 1.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -118 | Cycle | Base Deletion | 34348 | 2.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -119 | Cycle | Base Substitution | 34655 | 88.10 | 26.00 | 26.50 | -0.50 | After |
| REGRESSION.HCC1395_tumor.L003 | -119 | Cycle | Base Insertion | 34303 | 3.36 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -119 | Cycle | Base Deletion | 34303 | 3.30 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -12 | Cycle | Base Substitution | 38844 | 61.86 | 28.00 | 27.64 | 0.36 | After |
| REGRESSION.HCC1395_tumor.L003 | -12 | Cycle | Base Insertion | 38844 | 0.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -12 | Cycle | Base Deletion | 38844 | 3.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -120 | Cycle | Base Substitution | 34674 | 79.88 | 26.00 | 26.29 | -0.29 | After |
| REGRESSION.HCC1395_tumor.L003 | -120 | Cycle | Base Insertion | 34328 | 1.09 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -120 | Cycle | Base Deletion | 34328 | 4.79 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -121 | Cycle | Base Substitution | 34626 | 79.63 | 26.00 | 26.12 | -0.12 | After |
| REGRESSION.HCC1395_tumor.L003 | -121 | Cycle | Base Insertion | 34257 | 0.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -121 | Cycle | Base Deletion | 34257 | 3.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -122 | Cycle | Base Substitution | 34536 | 99.03 | 26.00 | 26.22 | -0.22 | After |
| REGRESSION.HCC1395_tumor.L003 | -122 | Cycle | Base Insertion | 34172 | 1.10 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -122 | Cycle | Base Deletion | 34172 | 3.85 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -123 | Cycle | Base Substitution | 34289 | 67.31 | 27.00 | 25.99 | 1.01 | After |
| REGRESSION.HCC1395_tumor.L003 | -123 | Cycle | Base Insertion | 33917 | 0.47 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -123 | Cycle | Base Deletion | 33917 | 3.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -124 | Cycle | Base Substitution | 34154 | 81.20 | 26.00 | 25.98 | 0.02 | After |
| REGRESSION.HCC1395_tumor.L003 | -124 | Cycle | Base Insertion | 33775 | 0.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -124 | Cycle | Base Deletion | 33775 | 3.21 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -125 | Cycle | Base Substitution | 34287 | 79.06 | 26.00 | 26.03 | -0.03 | After |
| REGRESSION.HCC1395_tumor.L003 | -125 | Cycle | Base Insertion | 33895 | 1.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -125 | Cycle | Base Deletion | 33895 | 3.55 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -126 | Cycle | Base Substitution | 34188 | 71.53 | 27.00 | 26.28 | 0.72 | After |
| REGRESSION.HCC1395_tumor.L003 | -126 | Cycle | Base Insertion | 33787 | 3.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -126 | Cycle | Base Deletion | 33787 | 3.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -127 | Cycle | Base Substitution | 34086 | 54.31 | 27.00 | 26.46 | 0.54 | After |
| REGRESSION.HCC1395_tumor.L003 | -127 | Cycle | Base Insertion | 33689 | 0.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -127 | Cycle | Base Deletion | 33689 | 2.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -128 | Cycle | Base Substitution | 33943 | 89.36 | 26.00 | 25.54 | 0.46 | After |
| REGRESSION.HCC1395_tumor.L003 | -128 | Cycle | Base Insertion | 33552 | 1.61 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -128 | Cycle | Base Deletion | 33552 | 3.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -129 | Cycle | Base Substitution | 33849 | 87.70 | 26.00 | 26.02 | -0.02 | After |
| REGRESSION.HCC1395_tumor.L003 | -129 | Cycle | Base Insertion | 33451 | 1.61 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -129 | Cycle | Base Deletion | 33451 | 2.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -13 | Cycle | Base Substitution | 38819 | 44.66 | 29.00 | 27.71 | 1.29 | After |
| REGRESSION.HCC1395_tumor.L003 | -13 | Cycle | Base Insertion | 38819 | 1.38 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -13 | Cycle | Base Deletion | 38819 | 3.29 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -130 | Cycle | Base Substitution | 33823 | 74.27 | 27.00 | 26.16 | 0.84 | After |
| REGRESSION.HCC1395_tumor.L003 | -130 | Cycle | Base Insertion | 33430 | 2.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -130 | Cycle | Base Deletion | 33430 | 2.98 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -131 | Cycle | Base Substitution | 33587 | 74.23 | 26.00 | 25.91 | 0.09 | After |
| REGRESSION.HCC1395_tumor.L003 | -131 | Cycle | Base Insertion | 33208 | 0.64 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -131 | Cycle | Base Deletion | 33208 | 2.79 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -132 | Cycle | Base Substitution | 33672 | 72.26 | 27.00 | 26.17 | 0.83 | After |
| REGRESSION.HCC1395_tumor.L003 | -132 | Cycle | Base Insertion | 33252 | 0.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -132 | Cycle | Base Deletion | 33252 | 2.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -133 | Cycle | Base Substitution | 33504 | 95.71 | 26.00 | 26.03 | -0.03 | After |
| REGRESSION.HCC1395_tumor.L003 | -133 | Cycle | Base Insertion | 33067 | 2.73 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -133 | Cycle | Base Deletion | 33067 | 2.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -134 | Cycle | Base Substitution | 33339 | 69.57 | 27.00 | 26.20 | 0.80 | After |
| REGRESSION.HCC1395_tumor.L003 | -134 | Cycle | Base Insertion | 32903 | 1.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -134 | Cycle | Base Deletion | 32903 | 2.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -135 | Cycle | Base Substitution | 33259 | 87.16 | 26.00 | 25.63 | 0.37 | After |
| REGRESSION.HCC1395_tumor.L003 | -135 | Cycle | Base Insertion | 32828 | 0.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -135 | Cycle | Base Deletion | 32828 | 2.37 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -136 | Cycle | Base Substitution | 33227 | 73.87 | 26.00 | 26.20 | -0.20 | After |
| REGRESSION.HCC1395_tumor.L003 | -136 | Cycle | Base Insertion | 32764 | 1.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -136 | Cycle | Base Deletion | 32764 | 2.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -137 | Cycle | Base Substitution | 33088 | 93.51 | 25.00 | 25.60 | -0.60 | After |
| REGRESSION.HCC1395_tumor.L003 | -137 | Cycle | Base Insertion | 32628 | 1.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -137 | Cycle | Base Deletion | 32628 | 1.56 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -138 | Cycle | Base Substitution | 32981 | 70.70 | 27.00 | 26.16 | 0.84 | After |
| REGRESSION.HCC1395_tumor.L003 | -138 | Cycle | Base Insertion | 32498 | 1.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -138 | Cycle | Base Deletion | 32498 | 1.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -139 | Cycle | Base Substitution | 32783 | 61.64 | 27.00 | 26.24 | 0.76 | After |
| REGRESSION.HCC1395_tumor.L003 | -139 | Cycle | Base Insertion | 32274 | 0.98 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -139 | Cycle | Base Deletion | 32274 | 1.84 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -14 | Cycle | Base Substitution | 38766 | 47.69 | 28.00 | 27.74 | 0.26 | After |
| REGRESSION.HCC1395_tumor.L003 | -14 | Cycle | Base Insertion | 38766 | 1.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -14 | Cycle | Base Deletion | 38766 | 3.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -140 | Cycle | Base Substitution | 32704 | 67.77 | 27.00 | 26.36 | 0.64 | After |
| REGRESSION.HCC1395_tumor.L003 | -140 | Cycle | Base Insertion | 32204 | 0.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -140 | Cycle | Base Deletion | 32204 | 2.10 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -141 | Cycle | Base Substitution | 32568 | 68.20 | 27.00 | 26.16 | 0.84 | After |
| REGRESSION.HCC1395_tumor.L003 | -141 | Cycle | Base Insertion | 32019 | 0.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -141 | Cycle | Base Deletion | 32019 | 1.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -142 | Cycle | Base Substitution | 32487 | 53.85 | 27.00 | 26.28 | 0.72 | After |
| REGRESSION.HCC1395_tumor.L003 | -142 | Cycle | Base Insertion | 31887 | 1.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -142 | Cycle | Base Deletion | 31887 | 1.17 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -143 | Cycle | Base Substitution | 32479 | 60.70 | 27.00 | 26.27 | 0.73 | After |
| REGRESSION.HCC1395_tumor.L003 | -143 | Cycle | Base Insertion | 31822 | 0.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -143 | Cycle | Base Deletion | 31822 | 0.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -144 | Cycle | Base Substitution | 32187 | 51.03 | 27.00 | 26.42 | 0.58 | After |
| REGRESSION.HCC1395_tumor.L003 | -144 | Cycle | Base Insertion | 31462 | 0.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -144 | Cycle | Base Deletion | 31462 | 0.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -145 | Cycle | Base Substitution | 32004 | 45.63 | 28.00 | 26.24 | 1.76 | After |
| REGRESSION.HCC1395_tumor.L003 | -145 | Cycle | Base Insertion | 24799 | 1.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -145 | Cycle | Base Deletion | 24799 | 0.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -146 | Cycle | Base Substitution | 31877 | 28.13 | 28.00 | 26.07 | 1.93 | After |
| REGRESSION.HCC1395_tumor.L003 | -146 | Cycle | Base Insertion | 24735 | 0.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -146 | Cycle | Base Deletion | 24735 | 0.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -147 | Cycle | Base Substitution | 31679 | 16.77 | 26.00 | 22.36 | 3.64 | After |
| REGRESSION.HCC1395_tumor.L003 | -148 | Cycle | Base Substitution | 31473 | 29.90 | 23.00 | 15.12 | 7.88 | After |
| REGRESSION.HCC1395_tumor.L003 | -149 | Cycle | Base Substitution | 19672 | 26.57 | 21.00 | 14.16 | 6.84 | After |
| REGRESSION.HCC1395_tumor.L003 | -15 | Cycle | Base Substitution | 38852 | 58.96 | 28.00 | 27.67 | 0.33 | After |
| REGRESSION.HCC1395_tumor.L003 | -15 | Cycle | Base Insertion | 38852 | 2.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -15 | Cycle | Base Deletion | 38852 | 4.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -150 | Cycle | Base Substitution | 6927 | 18.78 | 26.00 | 26.31 | -0.31 | After |
| REGRESSION.HCC1395_tumor.L003 | -16 | Cycle | Base Substitution | 38764 | 56.01 | 28.00 | 27.63 | 0.37 | After |
| REGRESSION.HCC1395_tumor.L003 | -16 | Cycle | Base Insertion | 38764 | 1.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -16 | Cycle | Base Deletion | 38764 | 4.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -17 | Cycle | Base Substitution | 38887 | 57.48 | 28.00 | 27.65 | 0.35 | After |
| REGRESSION.HCC1395_tumor.L003 | -17 | Cycle | Base Insertion | 38887 | 1.10 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -17 | Cycle | Base Deletion | 38887 | 4.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -18 | Cycle | Base Substitution | 38763 | 65.63 | 28.00 | 27.66 | 0.34 | After |
| REGRESSION.HCC1395_tumor.L003 | -18 | Cycle | Base Insertion | 38763 | 1.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -18 | Cycle | Base Deletion | 38763 | 3.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -19 | Cycle | Base Substitution | 38706 | 64.44 | 28.00 | 27.50 | 0.50 | After |
| REGRESSION.HCC1395_tumor.L003 | -19 | Cycle | Base Insertion | 38706 | 2.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -19 | Cycle | Base Deletion | 38706 | 3.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -2 | Cycle | Base Substitution | 38996 | 129.74 | 25.00 | 25.59 | -0.59 | After |
| REGRESSION.HCC1395_tumor.L003 | -20 | Cycle | Base Substitution | 38788 | 61.92 | 28.00 | 27.59 | 0.41 | After |
| REGRESSION.HCC1395_tumor.L003 | -20 | Cycle | Base Insertion | 38787 | 2.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -20 | Cycle | Base Deletion | 38787 | 3.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -21 | Cycle | Base Substitution | 38689 | 43.91 | 29.00 | 27.76 | 1.24 | After |
| REGRESSION.HCC1395_tumor.L003 | -21 | Cycle | Base Insertion | 38689 | 1.17 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -21 | Cycle | Base Deletion | 38689 | 3.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -22 | Cycle | Base Substitution | 38705 | 56.56 | 28.00 | 27.73 | 0.27 | After |
| REGRESSION.HCC1395_tumor.L003 | -22 | Cycle | Base Insertion | 38705 | 2.79 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -22 | Cycle | Base Deletion | 38705 | 3.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -23 | Cycle | Base Substitution | 38806 | 43.55 | 29.00 | 27.63 | 1.37 | After |
| REGRESSION.HCC1395_tumor.L003 | -23 | Cycle | Base Insertion | 38806 | 3.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -23 | Cycle | Base Deletion | 38806 | 4.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -24 | Cycle | Base Substitution | 38815 | 49.73 | 28.00 | 27.43 | 0.57 | After |
| REGRESSION.HCC1395_tumor.L003 | -24 | Cycle | Base Insertion | 38815 | 2.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -24 | Cycle | Base Deletion | 38815 | 4.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -25 | Cycle | Base Substitution | 38739 | 46.64 | 28.00 | 27.63 | 0.37 | After |
| REGRESSION.HCC1395_tumor.L003 | -25 | Cycle | Base Insertion | 38739 | 1.96 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -25 | Cycle | Base Deletion | 38739 | 4.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -26 | Cycle | Base Substitution | 38612 | 60.84 | 27.00 | 26.58 | 0.42 | After |
| REGRESSION.HCC1395_tumor.L003 | -26 | Cycle | Base Insertion | 38612 | 2.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -26 | Cycle | Base Deletion | 38612 | 4.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -27 | Cycle | Base Substitution | 38615 | 49.61 | 28.00 | 27.02 | 0.98 | After |
| REGRESSION.HCC1395_tumor.L003 | -27 | Cycle | Base Insertion | 38612 | 3.42 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -27 | Cycle | Base Deletion | 38612 | 4.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -28 | Cycle | Base Substitution | 38619 | 81.75 | 27.00 | 26.67 | 0.33 | After |
| REGRESSION.HCC1395_tumor.L003 | -28 | Cycle | Base Insertion | 38617 | 2.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -28 | Cycle | Base Deletion | 38617 | 4.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -29 | Cycle | Base Substitution | 38592 | 63.18 | 27.00 | 26.62 | 0.38 | After |
| REGRESSION.HCC1395_tumor.L003 | -29 | Cycle | Base Insertion | 38588 | 2.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -29 | Cycle | Base Deletion | 38588 | 4.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -3 | Cycle | Base Substitution | 38953 | 134.99 | 25.00 | 26.48 | -1.48 | After |
| REGRESSION.HCC1395_tumor.L003 | -30 | Cycle | Base Substitution | 38580 | 59.61 | 27.00 | 26.61 | 0.39 | After |
| REGRESSION.HCC1395_tumor.L003 | -30 | Cycle | Base Insertion | 38573 | 1.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -30 | Cycle | Base Deletion | 38573 | 4.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -31 | Cycle | Base Substitution | 38653 | 64.92 | 27.00 | 26.65 | 0.35 | After |
| REGRESSION.HCC1395_tumor.L003 | -31 | Cycle | Base Insertion | 38647 | 1.44 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -31 | Cycle | Base Deletion | 38647 | 5.61 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -32 | Cycle | Base Substitution | 38690 | 52.69 | 28.00 | 26.53 | 1.47 | After |
| REGRESSION.HCC1395_tumor.L003 | -32 | Cycle | Base Insertion | 38682 | 0.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -32 | Cycle | Base Deletion | 38682 | 5.55 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -33 | Cycle | Base Substitution | 38575 | 50.16 | 28.00 | 26.94 | 1.06 | After |
| REGRESSION.HCC1395_tumor.L003 | -33 | Cycle | Base Insertion | 38568 | 0.88 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -33 | Cycle | Base Deletion | 38568 | 5.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -34 | Cycle | Base Substitution | 38495 | 45.14 | 28.00 | 26.72 | 1.28 | After |
| REGRESSION.HCC1395_tumor.L003 | -34 | Cycle | Base Insertion | 38493 | 0.96 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -34 | Cycle | Base Deletion | 38493 | 4.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -35 | Cycle | Base Substitution | 38590 | 53.05 | 28.00 | 27.00 | 1.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -35 | Cycle | Base Insertion | 38587 | 1.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -35 | Cycle | Base Deletion | 38587 | 3.55 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -36 | Cycle | Base Substitution | 38588 | 57.31 | 28.00 | 26.63 | 1.37 | After |
| REGRESSION.HCC1395_tumor.L003 | -36 | Cycle | Base Insertion | 38585 | 1.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -36 | Cycle | Base Deletion | 38585 | 3.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -37 | Cycle | Base Substitution | 38414 | 66.50 | 27.00 | 26.62 | 0.38 | After |
| REGRESSION.HCC1395_tumor.L003 | -37 | Cycle | Base Insertion | 38412 | 1.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -37 | Cycle | Base Deletion | 38412 | 4.38 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -38 | Cycle | Base Substitution | 38581 | 62.32 | 27.00 | 26.65 | 0.35 | After |
| REGRESSION.HCC1395_tumor.L003 | -38 | Cycle | Base Insertion | 38579 | 3.47 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -38 | Cycle | Base Deletion | 38579 | 3.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -39 | Cycle | Base Substitution | 38510 | 53.91 | 28.00 | 26.60 | 1.40 | After |
| REGRESSION.HCC1395_tumor.L003 | -39 | Cycle | Base Insertion | 38506 | 1.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -39 | Cycle | Base Deletion | 38506 | 4.72 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -4 | Cycle | Base Substitution | 38823 | 84.33 | 27.00 | 26.18 | 0.82 | After |
| REGRESSION.HCC1395_tumor.L003 | -40 | Cycle | Base Substitution | 38579 | 68.36 | 27.00 | 26.51 | 0.49 | After |
| REGRESSION.HCC1395_tumor.L003 | -40 | Cycle | Base Insertion | 38576 | 3.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -40 | Cycle | Base Deletion | 38576 | 5.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -41 | Cycle | Base Substitution | 38386 | 59.51 | 27.00 | 26.72 | 0.28 | After |
| REGRESSION.HCC1395_tumor.L003 | -41 | Cycle | Base Insertion | 38383 | 1.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -41 | Cycle | Base Deletion | 38383 | 4.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -42 | Cycle | Base Substitution | 38295 | 36.59 | 29.00 | 27.56 | 1.44 | After |
| REGRESSION.HCC1395_tumor.L003 | -42 | Cycle | Base Insertion | 38290 | 1.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -42 | Cycle | Base Deletion | 38290 | 3.38 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -43 | Cycle | Base Substitution | 38524 | 58.84 | 27.00 | 26.72 | 0.28 | After |
| REGRESSION.HCC1395_tumor.L003 | -43 | Cycle | Base Insertion | 38519 | 2.61 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -43 | Cycle | Base Deletion | 38519 | 3.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -44 | Cycle | Base Substitution | 38463 | 49.24 | 28.00 | 27.08 | 0.92 | After |
| REGRESSION.HCC1395_tumor.L003 | -44 | Cycle | Base Insertion | 38459 | 1.98 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -44 | Cycle | Base Deletion | 38459 | 3.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -45 | Cycle | Base Substitution | 38576 | 53.83 | 28.00 | 26.83 | 1.17 | After |
| REGRESSION.HCC1395_tumor.L003 | -45 | Cycle | Base Insertion | 38570 | 2.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -45 | Cycle | Base Deletion | 38570 | 3.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -46 | Cycle | Base Substitution | 38374 | 41.05 | 28.00 | 26.87 | 1.13 | After |
| REGRESSION.HCC1395_tumor.L003 | -46 | Cycle | Base Insertion | 38369 | 1.57 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -46 | Cycle | Base Deletion | 38369 | 3.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -47 | Cycle | Base Substitution | 38435 | 68.44 | 27.00 | 26.66 | 0.34 | After |
| REGRESSION.HCC1395_tumor.L003 | -47 | Cycle | Base Insertion | 38429 | 1.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -47 | Cycle | Base Deletion | 38429 | 3.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -48 | Cycle | Base Substitution | 38444 | 49.77 | 28.00 | 27.04 | 0.96 | After |
| REGRESSION.HCC1395_tumor.L003 | -48 | Cycle | Base Insertion | 38435 | 1.46 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -48 | Cycle | Base Deletion | 38435 | 3.64 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -49 | Cycle | Base Substitution | 38384 | 57.61 | 28.00 | 26.81 | 1.19 | After |
| REGRESSION.HCC1395_tumor.L003 | -49 | Cycle | Base Insertion | 38370 | 1.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -49 | Cycle | Base Deletion | 38370 | 3.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -5 | Cycle | Base Substitution | 38955 | 62.04 | 27.00 | 26.85 | 0.15 | After |
| REGRESSION.HCC1395_tumor.L003 | -5 | Cycle | Base Insertion | 38955 | 2.46 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -5 | Cycle | Base Deletion | 38955 | 1.10 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -50 | Cycle | Base Substitution | 38421 | 62.77 | 28.00 | 27.14 | 0.86 | After |
| REGRESSION.HCC1395_tumor.L003 | -50 | Cycle | Base Insertion | 38409 | 1.95 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -50 | Cycle | Base Deletion | 38409 | 3.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -51 | Cycle | Base Substitution | 38303 | 56.37 | 28.00 | 27.02 | 0.98 | After |
| REGRESSION.HCC1395_tumor.L003 | -51 | Cycle | Base Insertion | 38281 | 3.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -51 | Cycle | Base Deletion | 38281 | 3.38 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -52 | Cycle | Base Substitution | 38319 | 53.01 | 28.00 | 26.76 | 1.24 | After |
| REGRESSION.HCC1395_tumor.L003 | -52 | Cycle | Base Insertion | 38296 | 1.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -52 | Cycle | Base Deletion | 38296 | 2.99 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -53 | Cycle | Base Substitution | 38192 | 44.58 | 28.00 | 26.92 | 1.08 | After |
| REGRESSION.HCC1395_tumor.L003 | -53 | Cycle | Base Insertion | 38166 | 1.84 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -53 | Cycle | Base Deletion | 38166 | 3.26 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -54 | Cycle | Base Substitution | 38260 | 68.54 | 27.00 | 27.04 | -0.04 | After |
| REGRESSION.HCC1395_tumor.L003 | -54 | Cycle | Base Insertion | 38226 | 2.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -54 | Cycle | Base Deletion | 38226 | 2.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -55 | Cycle | Base Substitution | 38319 | 66.00 | 27.00 | 26.77 | 0.23 | After |
| REGRESSION.HCC1395_tumor.L003 | -55 | Cycle | Base Insertion | 38284 | 3.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -55 | Cycle | Base Deletion | 38284 | 2.94 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -56 | Cycle | Base Substitution | 38194 | 62.20 | 27.00 | 26.95 | 0.05 | After |
| REGRESSION.HCC1395_tumor.L003 | -56 | Cycle | Base Insertion | 38155 | 2.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -56 | Cycle | Base Deletion | 38155 | 3.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -57 | Cycle | Base Substitution | 38273 | 51.22 | 28.00 | 26.94 | 1.06 | After |
| REGRESSION.HCC1395_tumor.L003 | -57 | Cycle | Base Insertion | 38223 | 2.57 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -57 | Cycle | Base Deletion | 38223 | 2.47 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -58 | Cycle | Base Substitution | 38252 | 55.10 | 28.00 | 26.98 | 1.02 | After |
| REGRESSION.HCC1395_tumor.L003 | -58 | Cycle | Base Insertion | 38198 | 2.09 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -58 | Cycle | Base Deletion | 38198 | 2.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -59 | Cycle | Base Substitution | 38435 | 66.10 | 27.00 | 26.78 | 0.22 | After |
| REGRESSION.HCC1395_tumor.L003 | -59 | Cycle | Base Insertion | 38375 | 2.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -59 | Cycle | Base Deletion | 38375 | 3.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -6 | Cycle | Base Substitution | 38808 | 75.00 | 27.00 | 26.82 | 0.18 | After |
| REGRESSION.HCC1395_tumor.L003 | -6 | Cycle | Base Insertion | 38808 | 0.99 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -6 | Cycle | Base Deletion | 38808 | 1.31 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -60 | Cycle | Base Substitution | 38272 | 79.11 | 27.00 | 26.68 | 0.32 | After |
| REGRESSION.HCC1395_tumor.L003 | -60 | Cycle | Base Insertion | 38210 | 1.30 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -60 | Cycle | Base Deletion | 38210 | 3.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -61 | Cycle | Base Substitution | 38011 | 53.30 | 28.00 | 27.24 | 0.76 | After |
| REGRESSION.HCC1395_tumor.L003 | -61 | Cycle | Base Insertion | 37948 | 1.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -61 | Cycle | Base Deletion | 37948 | 3.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -62 | Cycle | Base Substitution | 38089 | 59.00 | 27.00 | 26.99 | 0.01 | After |
| REGRESSION.HCC1395_tumor.L003 | -62 | Cycle | Base Insertion | 38024 | 0.99 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -62 | Cycle | Base Deletion | 38024 | 3.18 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -63 | Cycle | Base Substitution | 38199 | 65.90 | 27.00 | 26.85 | 0.15 | After |
| REGRESSION.HCC1395_tumor.L003 | -63 | Cycle | Base Insertion | 38126 | 1.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -63 | Cycle | Base Deletion | 38126 | 3.02 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -64 | Cycle | Base Substitution | 38232 | 69.92 | 27.00 | 26.77 | 0.23 | After |
| REGRESSION.HCC1395_tumor.L003 | -64 | Cycle | Base Insertion | 38153 | 1.31 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -64 | Cycle | Base Deletion | 38153 | 3.42 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -65 | Cycle | Base Substitution | 38196 | 66.34 | 28.00 | 27.01 | 0.99 | After |
| REGRESSION.HCC1395_tumor.L003 | -65 | Cycle | Base Insertion | 38103 | 1.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -65 | Cycle | Base Deletion | 38103 | 4.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -66 | Cycle | Base Substitution | 38331 | 72.03 | 27.00 | 26.74 | 0.26 | After |
| REGRESSION.HCC1395_tumor.L003 | -66 | Cycle | Base Insertion | 38234 | 2.82 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -66 | Cycle | Base Deletion | 38234 | 4.81 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -67 | Cycle | Base Substitution | 38038 | 60.56 | 28.00 | 27.09 | 0.91 | After |
| REGRESSION.HCC1395_tumor.L003 | -67 | Cycle | Base Insertion | 37948 | 3.02 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -67 | Cycle | Base Deletion | 37948 | 4.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -68 | Cycle | Base Substitution | 38095 | 66.52 | 27.00 | 26.75 | 0.25 | After |
| REGRESSION.HCC1395_tumor.L003 | -68 | Cycle | Base Insertion | 37993 | 1.51 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -68 | Cycle | Base Deletion | 37993 | 4.98 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -69 | Cycle | Base Substitution | 38058 | 66.99 | 27.00 | 27.00 | -0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -69 | Cycle | Base Insertion | 37950 | 2.86 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -69 | Cycle | Base Deletion | 37950 | 3.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -7 | Cycle | Base Substitution | 38750 | 83.33 | 27.00 | 26.89 | 0.11 | After |
| REGRESSION.HCC1395_tumor.L003 | -7 | Cycle | Base Insertion | 38750 | 2.36 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -7 | Cycle | Base Deletion | 38750 | 1.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -70 | Cycle | Base Substitution | 38124 | 71.52 | 27.00 | 26.80 | 0.20 | After |
| REGRESSION.HCC1395_tumor.L003 | -70 | Cycle | Base Insertion | 38013 | 1.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -70 | Cycle | Base Deletion | 38013 | 4.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -71 | Cycle | Base Substitution | 38069 | 80.63 | 27.00 | 26.61 | 0.39 | After |
| REGRESSION.HCC1395_tumor.L003 | -71 | Cycle | Base Insertion | 37936 | 2.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -71 | Cycle | Base Deletion | 37936 | 4.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -72 | Cycle | Base Substitution | 37917 | 69.60 | 27.00 | 26.73 | 0.27 | After |
| REGRESSION.HCC1395_tumor.L003 | -72 | Cycle | Base Insertion | 37776 | 1.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -72 | Cycle | Base Deletion | 37776 | 4.38 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -73 | Cycle | Base Substitution | 37887 | 60.73 | 27.00 | 26.99 | 0.01 | After |
| REGRESSION.HCC1395_tumor.L003 | -73 | Cycle | Base Insertion | 37734 | 1.17 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -73 | Cycle | Base Deletion | 37734 | 4.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -74 | Cycle | Base Substitution | 37955 | 62.85 | 28.00 | 27.01 | 0.99 | After |
| REGRESSION.HCC1395_tumor.L003 | -74 | Cycle | Base Insertion | 37791 | 1.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -74 | Cycle | Base Deletion | 37791 | 4.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -75 | Cycle | Base Substitution | 37868 | 63.63 | 27.00 | 26.70 | 0.30 | After |
| REGRESSION.HCC1395_tumor.L003 | -75 | Cycle | Base Insertion | 37701 | 1.36 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -75 | Cycle | Base Deletion | 37701 | 3.30 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -76 | Cycle | Base Substitution | 37831 | 73.87 | 27.00 | 26.64 | 0.36 | After |
| REGRESSION.HCC1395_tumor.L003 | -76 | Cycle | Base Insertion | 37655 | 1.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -76 | Cycle | Base Deletion | 37655 | 3.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -77 | Cycle | Base Substitution | 37770 | 73.15 | 27.00 | 26.60 | 0.40 | After |
| REGRESSION.HCC1395_tumor.L003 | -77 | Cycle | Base Insertion | 37595 | 1.42 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -77 | Cycle | Base Deletion | 37595 | 3.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -78 | Cycle | Base Substitution | 37619 | 87.78 | 26.00 | 26.77 | -0.77 | After |
| REGRESSION.HCC1395_tumor.L003 | -78 | Cycle | Base Insertion | 37445 | 1.46 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -78 | Cycle | Base Deletion | 37445 | 3.88 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -79 | Cycle | Base Substitution | 37629 | 75.87 | 27.00 | 26.64 | 0.36 | After |
| REGRESSION.HCC1395_tumor.L003 | -79 | Cycle | Base Insertion | 37450 | 1.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -79 | Cycle | Base Deletion | 37450 | 4.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -8 | Cycle | Base Substitution | 38870 | 66.61 | 27.00 | 26.98 | 0.02 | After |
| REGRESSION.HCC1395_tumor.L003 | -8 | Cycle | Base Insertion | 38870 | 2.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -8 | Cycle | Base Deletion | 38870 | 2.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -80 | Cycle | Base Substitution | 37520 | 67.25 | 27.00 | 26.59 | 0.41 | After |
| REGRESSION.HCC1395_tumor.L003 | -80 | Cycle | Base Insertion | 37345 | 1.56 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -80 | Cycle | Base Deletion | 37345 | 3.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -81 | Cycle | Base Substitution | 37605 | 72.20 | 27.00 | 26.67 | 0.33 | After |
| REGRESSION.HCC1395_tumor.L003 | -81 | Cycle | Base Insertion | 37424 | 2.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -81 | Cycle | Base Deletion | 37424 | 3.73 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -82 | Cycle | Base Substitution | 37477 | 73.03 | 27.00 | 26.49 | 0.51 | After |
| REGRESSION.HCC1395_tumor.L003 | -82 | Cycle | Base Insertion | 37279 | 3.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -82 | Cycle | Base Deletion | 37279 | 3.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -83 | Cycle | Base Substitution | 37401 | 68.69 | 27.00 | 26.42 | 0.58 | After |
| REGRESSION.HCC1395_tumor.L003 | -83 | Cycle | Base Insertion | 37186 | 1.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -83 | Cycle | Base Deletion | 37186 | 2.96 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -84 | Cycle | Base Substitution | 37392 | 72.65 | 27.00 | 26.66 | 0.34 | After |
| REGRESSION.HCC1395_tumor.L003 | -84 | Cycle | Base Insertion | 37175 | 1.56 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -84 | Cycle | Base Deletion | 37175 | 2.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -85 | Cycle | Base Substitution | 37379 | 86.25 | 26.00 | 26.69 | -0.69 | After |
| REGRESSION.HCC1395_tumor.L003 | -85 | Cycle | Base Insertion | 37176 | 2.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -85 | Cycle | Base Deletion | 37176 | 3.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -86 | Cycle | Base Substitution | 37084 | 88.29 | 26.00 | 26.22 | -0.22 | After |
| REGRESSION.HCC1395_tumor.L003 | -86 | Cycle | Base Insertion | 36871 | 2.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -86 | Cycle | Base Deletion | 36871 | 3.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -87 | Cycle | Base Substitution | 37310 | 76.01 | 27.00 | 26.74 | 0.26 | After |
| REGRESSION.HCC1395_tumor.L003 | -87 | Cycle | Base Insertion | 37085 | 2.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -87 | Cycle | Base Deletion | 37085 | 3.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -88 | Cycle | Base Substitution | 37266 | 75.56 | 27.00 | 26.74 | 0.26 | After |
| REGRESSION.HCC1395_tumor.L003 | -88 | Cycle | Base Insertion | 37029 | 1.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -88 | Cycle | Base Deletion | 37029 | 4.30 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -89 | Cycle | Base Substitution | 37107 | 90.61 | 26.00 | 26.44 | -0.44 | After |
| REGRESSION.HCC1395_tumor.L003 | -89 | Cycle | Base Insertion | 36861 | 1.30 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -89 | Cycle | Base Deletion | 36861 | 3.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -9 | Cycle | Base Substitution | 38824 | 53.49 | 28.00 | 27.24 | 0.76 | After |
| REGRESSION.HCC1395_tumor.L003 | -9 | Cycle | Base Insertion | 38824 | 1.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -9 | Cycle | Base Deletion | 38824 | 2.99 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -90 | Cycle | Base Substitution | 37099 | 62.79 | 27.00 | 26.59 | 0.41 | After |
| REGRESSION.HCC1395_tumor.L003 | -90 | Cycle | Base Insertion | 36852 | 1.79 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -90 | Cycle | Base Deletion | 36852 | 3.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -91 | Cycle | Base Substitution | 36950 | 84.23 | 26.00 | 26.65 | -0.65 | After |
| REGRESSION.HCC1395_tumor.L003 | -91 | Cycle | Base Insertion | 36695 | 1.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -91 | Cycle | Base Deletion | 36695 | 3.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -92 | Cycle | Base Substitution | 36826 | 77.40 | 27.00 | 26.67 | 0.33 | After |
| REGRESSION.HCC1395_tumor.L003 | -92 | Cycle | Base Insertion | 36551 | 2.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -92 | Cycle | Base Deletion | 36551 | 4.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -93 | Cycle | Base Substitution | 36891 | 92.51 | 26.00 | 25.87 | 0.13 | After |
| REGRESSION.HCC1395_tumor.L003 | -93 | Cycle | Base Insertion | 36628 | 1.88 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -93 | Cycle | Base Deletion | 36628 | 4.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -94 | Cycle | Base Substitution | 36710 | 70.98 | 27.00 | 26.66 | 0.34 | After |
| REGRESSION.HCC1395_tumor.L003 | -94 | Cycle | Base Insertion | 36440 | 1.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -94 | Cycle | Base Deletion | 36440 | 3.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -95 | Cycle | Base Substitution | 36700 | 78.10 | 27.00 | 26.65 | 0.35 | After |
| REGRESSION.HCC1395_tumor.L003 | -95 | Cycle | Base Insertion | 36429 | 4.84 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -95 | Cycle | Base Deletion | 36429 | 2.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -96 | Cycle | Base Substitution | 36630 | 96.86 | 26.00 | 26.47 | -0.47 | After |
| REGRESSION.HCC1395_tumor.L003 | -96 | Cycle | Base Insertion | 36350 | 2.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -96 | Cycle | Base Deletion | 36350 | 3.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -97 | Cycle | Base Substitution | 36477 | 85.26 | 26.00 | 26.53 | -0.53 | After |
| REGRESSION.HCC1395_tumor.L003 | -97 | Cycle | Base Insertion | 36165 | 2.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -97 | Cycle | Base Deletion | 36165 | 4.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -98 | Cycle | Base Substitution | 36604 | 75.83 | 27.00 | 26.30 | 0.70 | After |
| REGRESSION.HCC1395_tumor.L003 | -98 | Cycle | Base Insertion | 36294 | 3.61 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -98 | Cycle | Base Deletion | 36294 | 4.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -99 | Cycle | Base Substitution | 36361 | 80.22 | 27.00 | 26.65 | 0.35 | After |
| REGRESSION.HCC1395_tumor.L003 | -99 | Cycle | Base Insertion | 36060 | 2.18 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | -99 | Cycle | Base Deletion | 36060 | 4.99 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 1 | Cycle | Base Substitution | 38428 | 90.67 | 26.00 | 25.93 | 0.07 | After |
| REGRESSION.HCC1395_tumor.L003 | 10 | Cycle | Base Substitution | 38779 | 46.93 | 28.00 | 27.50 | 0.50 | After |
| REGRESSION.HCC1395_tumor.L003 | 10 | Cycle | Base Insertion | 38779 | 1.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 10 | Cycle | Base Deletion | 38779 | 1.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 100 | Cycle | Base Substitution | 36321 | 68.77 | 27.00 | 26.94 | 0.06 | After |
| REGRESSION.HCC1395_tumor.L003 | 100 | Cycle | Base Insertion | 36023 | 0.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 100 | Cycle | Base Deletion | 36023 | 3.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 101 | Cycle | Base Substitution | 36382 | 57.76 | 27.00 | 26.91 | 0.09 | After |
| REGRESSION.HCC1395_tumor.L003 | 101 | Cycle | Base Insertion | 36089 | 1.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 101 | Cycle | Base Deletion | 36089 | 4.73 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 102 | Cycle | Base Substitution | 36318 | 62.62 | 27.00 | 26.86 | 0.14 | After |
| REGRESSION.HCC1395_tumor.L003 | 102 | Cycle | Base Insertion | 36014 | 2.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 102 | Cycle | Base Deletion | 36014 | 4.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 103 | Cycle | Base Substitution | 36172 | 52.52 | 28.00 | 26.69 | 1.31 | After |
| REGRESSION.HCC1395_tumor.L003 | 103 | Cycle | Base Insertion | 35863 | 1.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 103 | Cycle | Base Deletion | 35863 | 3.61 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 104 | Cycle | Base Substitution | 36241 | 60.07 | 27.00 | 26.76 | 0.24 | After |
| REGRESSION.HCC1395_tumor.L003 | 104 | Cycle | Base Insertion | 35936 | 2.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 104 | Cycle | Base Deletion | 35936 | 4.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 105 | Cycle | Base Substitution | 36124 | 72.49 | 27.00 | 27.00 | -0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 105 | Cycle | Base Insertion | 35818 | 2.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 105 | Cycle | Base Deletion | 35818 | 3.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 106 | Cycle | Base Substitution | 35874 | 63.72 | 27.00 | 26.80 | 0.20 | After |
| REGRESSION.HCC1395_tumor.L003 | 106 | Cycle | Base Insertion | 35554 | 1.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 106 | Cycle | Base Deletion | 35554 | 2.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 107 | Cycle | Base Substitution | 35905 | 76.55 | 27.00 | 26.52 | 0.48 | After |
| REGRESSION.HCC1395_tumor.L003 | 107 | Cycle | Base Insertion | 35591 | 1.18 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 107 | Cycle | Base Deletion | 35591 | 3.09 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 108 | Cycle | Base Substitution | 35699 | 71.64 | 27.00 | 26.84 | 0.16 | After |
| REGRESSION.HCC1395_tumor.L003 | 108 | Cycle | Base Insertion | 35358 | 1.26 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 108 | Cycle | Base Deletion | 35358 | 3.10 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 109 | Cycle | Base Substitution | 35809 | 58.34 | 27.00 | 26.80 | 0.20 | After |
| REGRESSION.HCC1395_tumor.L003 | 109 | Cycle | Base Insertion | 35478 | 2.64 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 109 | Cycle | Base Deletion | 35478 | 3.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 11 | Cycle | Base Substitution | 38706 | 40.66 | 29.00 | 27.60 | 1.40 | After |
| REGRESSION.HCC1395_tumor.L003 | 11 | Cycle | Base Insertion | 38706 | 1.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 11 | Cycle | Base Deletion | 38706 | 2.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 110 | Cycle | Base Substitution | 35563 | 91.00 | 26.00 | 25.88 | 0.12 | After |
| REGRESSION.HCC1395_tumor.L003 | 110 | Cycle | Base Insertion | 35226 | 1.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 110 | Cycle | Base Deletion | 35226 | 2.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 111 | Cycle | Base Substitution | 35452 | 66.46 | 27.00 | 26.69 | 0.31 | After |
| REGRESSION.HCC1395_tumor.L003 | 111 | Cycle | Base Insertion | 35115 | 1.72 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 111 | Cycle | Base Deletion | 35115 | 3.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 112 | Cycle | Base Substitution | 35345 | 62.35 | 27.00 | 26.91 | 0.09 | After |
| REGRESSION.HCC1395_tumor.L003 | 112 | Cycle | Base Insertion | 35025 | 1.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 112 | Cycle | Base Deletion | 35025 | 4.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 113 | Cycle | Base Substitution | 35438 | 62.71 | 27.00 | 26.71 | 0.29 | After |
| REGRESSION.HCC1395_tumor.L003 | 113 | Cycle | Base Insertion | 35117 | 1.88 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 113 | Cycle | Base Deletion | 35117 | 3.57 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 114 | Cycle | Base Substitution | 35250 | 61.22 | 27.00 | 26.68 | 0.32 | After |
| REGRESSION.HCC1395_tumor.L003 | 114 | Cycle | Base Insertion | 34925 | 1.81 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 114 | Cycle | Base Deletion | 34925 | 3.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 115 | Cycle | Base Substitution | 35228 | 79.74 | 26.00 | 26.54 | -0.54 | After |
| REGRESSION.HCC1395_tumor.L003 | 115 | Cycle | Base Insertion | 34879 | 0.73 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 115 | Cycle | Base Deletion | 34879 | 3.18 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 116 | Cycle | Base Substitution | 35072 | 70.53 | 27.00 | 26.59 | 0.41 | After |
| REGRESSION.HCC1395_tumor.L003 | 116 | Cycle | Base Insertion | 34731 | 2.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 116 | Cycle | Base Deletion | 34731 | 3.07 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 117 | Cycle | Base Substitution | 35145 | 76.90 | 27.00 | 26.61 | 0.39 | After |
| REGRESSION.HCC1395_tumor.L003 | 117 | Cycle | Base Insertion | 34785 | 2.17 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 117 | Cycle | Base Deletion | 34785 | 3.02 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 118 | Cycle | Base Substitution | 34913 | 57.74 | 27.00 | 26.64 | 0.36 | After |
| REGRESSION.HCC1395_tumor.L003 | 118 | Cycle | Base Insertion | 34554 | 1.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 118 | Cycle | Base Deletion | 34554 | 3.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 119 | Cycle | Base Substitution | 34868 | 63.69 | 27.00 | 26.65 | 0.35 | After |
| REGRESSION.HCC1395_tumor.L003 | 119 | Cycle | Base Insertion | 34493 | 1.55 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 119 | Cycle | Base Deletion | 34493 | 4.96 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 12 | Cycle | Base Substitution | 38684 | 42.83 | 29.00 | 27.88 | 1.12 | After |
| REGRESSION.HCC1395_tumor.L003 | 12 | Cycle | Base Insertion | 38684 | 1.42 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 12 | Cycle | Base Deletion | 38684 | 2.36 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 120 | Cycle | Base Substitution | 34737 | 59.97 | 27.00 | 26.62 | 0.38 | After |
| REGRESSION.HCC1395_tumor.L003 | 120 | Cycle | Base Insertion | 34378 | 1.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 120 | Cycle | Base Deletion | 34378 | 2.99 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 121 | Cycle | Base Substitution | 34648 | 66.44 | 27.00 | 26.53 | 0.47 | After |
| REGRESSION.HCC1395_tumor.L003 | 121 | Cycle | Base Insertion | 34281 | 2.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 121 | Cycle | Base Deletion | 34281 | 2.88 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 122 | Cycle | Base Substitution | 34685 | 66.01 | 27.00 | 26.55 | 0.45 | After |
| REGRESSION.HCC1395_tumor.L003 | 122 | Cycle | Base Insertion | 34323 | 1.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 122 | Cycle | Base Deletion | 34323 | 3.07 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 123 | Cycle | Base Substitution | 34495 | 73.86 | 27.00 | 26.55 | 0.45 | After |
| REGRESSION.HCC1395_tumor.L003 | 123 | Cycle | Base Insertion | 34136 | 1.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 123 | Cycle | Base Deletion | 34136 | 2.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 124 | Cycle | Base Substitution | 34374 | 64.75 | 27.00 | 25.88 | 1.12 | After |
| REGRESSION.HCC1395_tumor.L003 | 124 | Cycle | Base Insertion | 33986 | 2.09 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 124 | Cycle | Base Deletion | 33986 | 1.79 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 125 | Cycle | Base Substitution | 34248 | 56.37 | 27.00 | 26.63 | 0.37 | After |
| REGRESSION.HCC1395_tumor.L003 | 125 | Cycle | Base Insertion | 33872 | 2.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 125 | Cycle | Base Deletion | 33872 | 2.10 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 126 | Cycle | Base Substitution | 34310 | 67.30 | 27.00 | 26.53 | 0.47 | After |
| REGRESSION.HCC1395_tumor.L003 | 126 | Cycle | Base Insertion | 33922 | 1.44 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 126 | Cycle | Base Deletion | 33922 | 2.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 127 | Cycle | Base Substitution | 34221 | 61.15 | 27.00 | 26.53 | 0.47 | After |
| REGRESSION.HCC1395_tumor.L003 | 127 | Cycle | Base Insertion | 33838 | 2.86 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 127 | Cycle | Base Deletion | 33838 | 2.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 128 | Cycle | Base Substitution | 34040 | 67.58 | 27.00 | 26.70 | 0.30 | After |
| REGRESSION.HCC1395_tumor.L003 | 128 | Cycle | Base Insertion | 33669 | 0.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 128 | Cycle | Base Deletion | 33669 | 2.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 129 | Cycle | Base Substitution | 33990 | 79.36 | 26.00 | 26.06 | -0.06 | After |
| REGRESSION.HCC1395_tumor.L003 | 129 | Cycle | Base Insertion | 33627 | 1.36 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 129 | Cycle | Base Deletion | 33627 | 1.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 13 | Cycle | Base Substitution | 38765 | 33.48 | 30.00 | 28.08 | 1.92 | After |
| REGRESSION.HCC1395_tumor.L003 | 13 | Cycle | Base Insertion | 38765 | 2.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 13 | Cycle | Base Deletion | 38765 | 2.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 130 | Cycle | Base Substitution | 33873 | 66.71 | 27.00 | 26.60 | 0.40 | After |
| REGRESSION.HCC1395_tumor.L003 | 130 | Cycle | Base Insertion | 33496 | 1.44 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 130 | Cycle | Base Deletion | 33496 | 2.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 131 | Cycle | Base Substitution | 33770 | 72.40 | 27.00 | 26.47 | 0.53 | After |
| REGRESSION.HCC1395_tumor.L003 | 131 | Cycle | Base Insertion | 33397 | 1.26 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 131 | Cycle | Base Deletion | 33397 | 3.73 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 132 | Cycle | Base Substitution | 33811 | 59.68 | 27.00 | 26.50 | 0.50 | After |
| REGRESSION.HCC1395_tumor.L003 | 132 | Cycle | Base Insertion | 33434 | 0.64 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 132 | Cycle | Base Deletion | 33434 | 2.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 133 | Cycle | Base Substitution | 33564 | 77.26 | 26.00 | 26.53 | -0.53 | After |
| REGRESSION.HCC1395_tumor.L003 | 133 | Cycle | Base Insertion | 33156 | 1.77 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 133 | Cycle | Base Deletion | 33156 | 3.10 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 134 | Cycle | Base Substitution | 33508 | 79.51 | 26.00 | 25.86 | 0.14 | After |
| REGRESSION.HCC1395_tumor.L003 | 134 | Cycle | Base Insertion | 33088 | 1.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 134 | Cycle | Base Deletion | 33088 | 2.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 135 | Cycle | Base Substitution | 33256 | 69.50 | 27.00 | 26.54 | 0.46 | After |
| REGRESSION.HCC1395_tumor.L003 | 135 | Cycle | Base Insertion | 32827 | 1.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 135 | Cycle | Base Deletion | 32827 | 3.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 136 | Cycle | Base Substitution | 33300 | 71.79 | 27.00 | 26.61 | 0.39 | After |
| REGRESSION.HCC1395_tumor.L003 | 136 | Cycle | Base Insertion | 32865 | 0.73 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 136 | Cycle | Base Deletion | 32865 | 2.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 137 | Cycle | Base Substitution | 33236 | 62.23 | 27.00 | 26.50 | 0.50 | After |
| REGRESSION.HCC1395_tumor.L003 | 137 | Cycle | Base Insertion | 32798 | 0.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 137 | Cycle | Base Deletion | 32798 | 2.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 138 | Cycle | Base Substitution | 33148 | 78.32 | 26.00 | 26.48 | -0.48 | After |
| REGRESSION.HCC1395_tumor.L003 | 138 | Cycle | Base Insertion | 32731 | 0.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 138 | Cycle | Base Deletion | 32731 | 3.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 139 | Cycle | Base Substitution | 32993 | 69.23 | 27.00 | 26.50 | 0.50 | After |
| REGRESSION.HCC1395_tumor.L003 | 139 | Cycle | Base Insertion | 32578 | 0.31 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 139 | Cycle | Base Deletion | 32578 | 3.17 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 14 | Cycle | Base Substitution | 38661 | 38.05 | 29.00 | 27.81 | 1.19 | After |
| REGRESSION.HCC1395_tumor.L003 | 14 | Cycle | Base Insertion | 38661 | 1.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 14 | Cycle | Base Deletion | 38661 | 2.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 140 | Cycle | Base Substitution | 32903 | 70.64 | 27.00 | 26.07 | 0.93 | After |
| REGRESSION.HCC1395_tumor.L003 | 140 | Cycle | Base Insertion | 32501 | 0.31 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 140 | Cycle | Base Deletion | 32501 | 2.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 141 | Cycle | Base Substitution | 32835 | 66.36 | 27.00 | 26.60 | 0.40 | After |
| REGRESSION.HCC1395_tumor.L003 | 141 | Cycle | Base Insertion | 32426 | 1.31 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 141 | Cycle | Base Deletion | 32426 | 1.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 142 | Cycle | Base Substitution | 32707 | 76.89 | 26.00 | 26.71 | -0.71 | After |
| REGRESSION.HCC1395_tumor.L003 | 142 | Cycle | Base Insertion | 32246 | 0.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 142 | Cycle | Base Deletion | 32246 | 1.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 143 | Cycle | Base Substitution | 32650 | 78.80 | 26.00 | 26.37 | -0.37 | After |
| REGRESSION.HCC1395_tumor.L003 | 143 | Cycle | Base Insertion | 32205 | 0.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 143 | Cycle | Base Deletion | 32205 | 1.79 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 144 | Cycle | Base Substitution | 32545 | 63.52 | 27.00 | 26.33 | 0.67 | After |
| REGRESSION.HCC1395_tumor.L003 | 144 | Cycle | Base Insertion | 32071 | 1.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 144 | Cycle | Base Deletion | 32071 | 1.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 145 | Cycle | Base Substitution | 32351 | 55.73 | 27.00 | 26.34 | 0.66 | After |
| REGRESSION.HCC1395_tumor.L003 | 145 | Cycle | Base Insertion | 31890 | 0.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 145 | Cycle | Base Deletion | 31890 | 0.84 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 146 | Cycle | Base Substitution | 32219 | 86.27 | 26.00 | 26.18 | -0.18 | After |
| REGRESSION.HCC1395_tumor.L003 | 146 | Cycle | Base Insertion | 31786 | 0.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 146 | Cycle | Base Deletion | 31786 | 0.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 147 | Cycle | Base Substitution | 32134 | 77.24 | 26.00 | 26.39 | -0.39 | After |
| REGRESSION.HCC1395_tumor.L003 | 148 | Cycle | Base Substitution | 32056 | 83.83 | 26.00 | 26.63 | -0.63 | After |
| REGRESSION.HCC1395_tumor.L003 | 149 | Cycle | Base Substitution | 31882 | 90.02 | 26.00 | 26.34 | -0.34 | After |
| REGRESSION.HCC1395_tumor.L003 | 15 | Cycle | Base Substitution | 38859 | 36.03 | 29.00 | 27.71 | 1.29 | After |
| REGRESSION.HCC1395_tumor.L003 | 15 | Cycle | Base Insertion | 38859 | 2.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 15 | Cycle | Base Deletion | 38859 | 3.07 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 150 | Cycle | Base Substitution | 31899 | 73.99 | 26.00 | 26.57 | -0.57 | After |
| REGRESSION.HCC1395_tumor.L003 | 16 | Cycle | Base Substitution | 38779 | 31.47 | 30.00 | 28.65 | 1.35 | After |
| REGRESSION.HCC1395_tumor.L003 | 16 | Cycle | Base Insertion | 38779 | 1.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 16 | Cycle | Base Deletion | 38779 | 4.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 17 | Cycle | Base Substitution | 38785 | 27.91 | 30.00 | 28.58 | 1.42 | After |
| REGRESSION.HCC1395_tumor.L003 | 17 | Cycle | Base Insertion | 38785 | 1.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 17 | Cycle | Base Deletion | 38785 | 4.17 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 18 | Cycle | Base Substitution | 38780 | 22.03 | 30.00 | 28.64 | 1.36 | After |
| REGRESSION.HCC1395_tumor.L003 | 18 | Cycle | Base Insertion | 38780 | 2.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 18 | Cycle | Base Deletion | 38780 | 3.31 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 19 | Cycle | Base Substitution | 38678 | 28.99 | 30.00 | 28.34 | 1.66 | After |
| REGRESSION.HCC1395_tumor.L003 | 19 | Cycle | Base Insertion | 38678 | 1.47 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 19 | Cycle | Base Deletion | 38678 | 2.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 2 | Cycle | Base Substitution | 38912 | 85.21 | 27.00 | 26.95 | 0.05 | After |
| REGRESSION.HCC1395_tumor.L003 | 20 | Cycle | Base Substitution | 38659 | 18.80 | 30.00 | 28.62 | 1.38 | After |
| REGRESSION.HCC1395_tumor.L003 | 20 | Cycle | Base Insertion | 38659 | 2.98 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 20 | Cycle | Base Deletion | 38659 | 3.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 21 | Cycle | Base Substitution | 38649 | 34.76 | 29.00 | 28.82 | 0.18 | After |
| REGRESSION.HCC1395_tumor.L003 | 21 | Cycle | Base Insertion | 38649 | 1.72 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 21 | Cycle | Base Deletion | 38649 | 3.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 22 | Cycle | Base Substitution | 38627 | 28.89 | 30.00 | 28.32 | 1.68 | After |
| REGRESSION.HCC1395_tumor.L003 | 22 | Cycle | Base Insertion | 38626 | 1.81 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 22 | Cycle | Base Deletion | 38626 | 3.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 23 | Cycle | Base Substitution | 38708 | 24.84 | 30.00 | 28.52 | 1.48 | After |
| REGRESSION.HCC1395_tumor.L003 | 23 | Cycle | Base Insertion | 38707 | 3.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 23 | Cycle | Base Deletion | 38707 | 4.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 24 | Cycle | Base Substitution | 38598 | 29.76 | 30.00 | 28.50 | 1.50 | After |
| REGRESSION.HCC1395_tumor.L003 | 24 | Cycle | Base Insertion | 38597 | 1.17 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 24 | Cycle | Base Deletion | 38597 | 3.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 25 | Cycle | Base Substitution | 38589 | 31.75 | 30.00 | 28.49 | 1.51 | After |
| REGRESSION.HCC1395_tumor.L003 | 25 | Cycle | Base Insertion | 38588 | 1.46 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 25 | Cycle | Base Deletion | 38588 | 3.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 26 | Cycle | Base Substitution | 38562 | 43.66 | 29.00 | 27.65 | 1.35 | After |
| REGRESSION.HCC1395_tumor.L003 | 26 | Cycle | Base Insertion | 38562 | 1.36 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 26 | Cycle | Base Deletion | 38562 | 3.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 27 | Cycle | Base Substitution | 38374 | 40.41 | 29.00 | 27.74 | 1.26 | After |
| REGRESSION.HCC1395_tumor.L003 | 27 | Cycle | Base Insertion | 38372 | 0.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 27 | Cycle | Base Deletion | 38372 | 2.82 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 28 | Cycle | Base Substitution | 38464 | 45.88 | 28.00 | 27.75 | 0.25 | After |
| REGRESSION.HCC1395_tumor.L003 | 28 | Cycle | Base Insertion | 38463 | 2.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 28 | Cycle | Base Deletion | 38463 | 3.79 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 29 | Cycle | Base Substitution | 38616 | 33.05 | 30.00 | 28.37 | 1.63 | After |
| REGRESSION.HCC1395_tumor.L003 | 29 | Cycle | Base Insertion | 38611 | 1.10 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 29 | Cycle | Base Deletion | 38611 | 3.46 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 3 | Cycle | Base Substitution | 38915 | 105.83 | 26.00 | 27.37 | -1.37 | After |
| REGRESSION.HCC1395_tumor.L003 | 30 | Cycle | Base Substitution | 38619 | 48.00 | 28.00 | 27.73 | 0.27 | After |
| REGRESSION.HCC1395_tumor.L003 | 30 | Cycle | Base Insertion | 38610 | 1.55 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 30 | Cycle | Base Deletion | 38610 | 3.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 31 | Cycle | Base Substitution | 38608 | 44.54 | 28.00 | 27.68 | 0.32 | After |
| REGRESSION.HCC1395_tumor.L003 | 31 | Cycle | Base Insertion | 38599 | 1.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 31 | Cycle | Base Deletion | 38599 | 3.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 32 | Cycle | Base Substitution | 38607 | 60.53 | 28.00 | 27.70 | 0.30 | After |
| REGRESSION.HCC1395_tumor.L003 | 32 | Cycle | Base Insertion | 38597 | 1.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 32 | Cycle | Base Deletion | 38597 | 3.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 33 | Cycle | Base Substitution | 38548 | 36.52 | 29.00 | 28.46 | 0.54 | After |
| REGRESSION.HCC1395_tumor.L003 | 33 | Cycle | Base Insertion | 38542 | 2.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 33 | Cycle | Base Deletion | 38542 | 4.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 34 | Cycle | Base Substitution | 38516 | 40.43 | 29.00 | 27.80 | 1.20 | After |
| REGRESSION.HCC1395_tumor.L003 | 34 | Cycle | Base Insertion | 38512 | 1.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 34 | Cycle | Base Deletion | 38512 | 4.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 35 | Cycle | Base Substitution | 38559 | 38.14 | 29.00 | 27.62 | 1.38 | After |
| REGRESSION.HCC1395_tumor.L003 | 35 | Cycle | Base Insertion | 38555 | 1.73 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 35 | Cycle | Base Deletion | 38555 | 4.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 36 | Cycle | Base Substitution | 38402 | 53.53 | 28.00 | 28.12 | -0.12 | After |
| REGRESSION.HCC1395_tumor.L003 | 36 | Cycle | Base Insertion | 38399 | 2.42 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 36 | Cycle | Base Deletion | 38399 | 4.47 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 37 | Cycle | Base Substitution | 38430 | 40.38 | 29.00 | 27.89 | 1.11 | After |
| REGRESSION.HCC1395_tumor.L003 | 37 | Cycle | Base Insertion | 38426 | 2.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 37 | Cycle | Base Deletion | 38426 | 3.79 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 38 | Cycle | Base Substitution | 38447 | 50.01 | 28.00 | 27.70 | 0.30 | After |
| REGRESSION.HCC1395_tumor.L003 | 38 | Cycle | Base Insertion | 38445 | 4.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 38 | Cycle | Base Deletion | 38445 | 4.46 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 39 | Cycle | Base Substitution | 38492 | 37.07 | 29.00 | 27.55 | 1.45 | After |
| REGRESSION.HCC1395_tumor.L003 | 39 | Cycle | Base Insertion | 38490 | 2.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 39 | Cycle | Base Deletion | 38490 | 5.10 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 4 | Cycle | Base Substitution | 38784 | 78.06 | 27.00 | 26.94 | 0.06 | After |
| REGRESSION.HCC1395_tumor.L003 | 40 | Cycle | Base Substitution | 38404 | 41.91 | 29.00 | 27.90 | 1.10 | After |
| REGRESSION.HCC1395_tumor.L003 | 40 | Cycle | Base Insertion | 38402 | 2.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 40 | Cycle | Base Deletion | 38402 | 5.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 41 | Cycle | Base Substitution | 38438 | 48.38 | 29.00 | 28.05 | 0.95 | After |
| REGRESSION.HCC1395_tumor.L003 | 41 | Cycle | Base Insertion | 38437 | 1.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 41 | Cycle | Base Deletion | 38437 | 4.56 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 42 | Cycle | Base Substitution | 38379 | 35.81 | 29.00 | 28.18 | 0.82 | After |
| REGRESSION.HCC1395_tumor.L003 | 42 | Cycle | Base Insertion | 38378 | 1.31 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 42 | Cycle | Base Deletion | 38378 | 4.55 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 43 | Cycle | Base Substitution | 38496 | 43.39 | 29.00 | 28.14 | 0.86 | After |
| REGRESSION.HCC1395_tumor.L003 | 43 | Cycle | Base Insertion | 38494 | 1.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 43 | Cycle | Base Deletion | 38494 | 4.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 44 | Cycle | Base Substitution | 38503 | 42.89 | 29.00 | 28.04 | 0.96 | After |
| REGRESSION.HCC1395_tumor.L003 | 44 | Cycle | Base Insertion | 38500 | 1.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 44 | Cycle | Base Deletion | 38500 | 4.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 45 | Cycle | Base Substitution | 38432 | 33.96 | 29.00 | 28.03 | 0.97 | After |
| REGRESSION.HCC1395_tumor.L003 | 45 | Cycle | Base Insertion | 38425 | 1.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 45 | Cycle | Base Deletion | 38425 | 3.79 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 46 | Cycle | Base Substitution | 38441 | 31.64 | 30.00 | 28.33 | 1.67 | After |
| REGRESSION.HCC1395_tumor.L003 | 46 | Cycle | Base Insertion | 38433 | 1.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 46 | Cycle | Base Deletion | 38433 | 4.17 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 47 | Cycle | Base Substitution | 38447 | 44.14 | 29.00 | 27.64 | 1.36 | After |
| REGRESSION.HCC1395_tumor.L003 | 47 | Cycle | Base Insertion | 38438 | 1.57 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 47 | Cycle | Base Deletion | 38438 | 4.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 48 | Cycle | Base Substitution | 38417 | 50.64 | 28.00 | 27.60 | 0.40 | After |
| REGRESSION.HCC1395_tumor.L003 | 48 | Cycle | Base Insertion | 38406 | 2.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 48 | Cycle | Base Deletion | 38406 | 4.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 49 | Cycle | Base Substitution | 38441 | 37.22 | 29.00 | 27.94 | 1.06 | After |
| REGRESSION.HCC1395_tumor.L003 | 49 | Cycle | Base Insertion | 38429 | 1.48 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 49 | Cycle | Base Deletion | 38429 | 5.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 5 | Cycle | Base Substitution | 38883 | 54.09 | 28.00 | 27.66 | 0.34 | After |
| REGRESSION.HCC1395_tumor.L003 | 5 | Cycle | Base Insertion | 38883 | 0.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 5 | Cycle | Base Deletion | 38883 | 1.99 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 50 | Cycle | Base Substitution | 38349 | 43.33 | 29.00 | 27.66 | 1.34 | After |
| REGRESSION.HCC1395_tumor.L003 | 50 | Cycle | Base Insertion | 38335 | 1.38 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 50 | Cycle | Base Deletion | 38335 | 5.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 51 | Cycle | Base Substitution | 38292 | 53.49 | 28.00 | 27.60 | 0.40 | After |
| REGRESSION.HCC1395_tumor.L003 | 51 | Cycle | Base Insertion | 38274 | 1.57 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 51 | Cycle | Base Deletion | 38274 | 4.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 52 | Cycle | Base Substitution | 38515 | 48.42 | 28.00 | 27.71 | 0.29 | After |
| REGRESSION.HCC1395_tumor.L003 | 52 | Cycle | Base Insertion | 38495 | 1.95 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 52 | Cycle | Base Deletion | 38495 | 5.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 53 | Cycle | Base Substitution | 38321 | 45.09 | 28.00 | 27.77 | 0.23 | After |
| REGRESSION.HCC1395_tumor.L003 | 53 | Cycle | Base Insertion | 38294 | 1.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 53 | Cycle | Base Deletion | 38294 | 5.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 54 | Cycle | Base Substitution | 38305 | 39.34 | 29.00 | 27.73 | 1.27 | After |
| REGRESSION.HCC1395_tumor.L003 | 54 | Cycle | Base Insertion | 38271 | 4.21 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 54 | Cycle | Base Deletion | 38271 | 5.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 55 | Cycle | Base Substitution | 38356 | 40.39 | 29.00 | 27.75 | 1.25 | After |
| REGRESSION.HCC1395_tumor.L003 | 55 | Cycle | Base Insertion | 38322 | 1.29 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 55 | Cycle | Base Deletion | 38322 | 5.18 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 56 | Cycle | Base Substitution | 38313 | 56.14 | 28.00 | 27.55 | 0.45 | After |
| REGRESSION.HCC1395_tumor.L003 | 56 | Cycle | Base Insertion | 38273 | 1.82 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 56 | Cycle | Base Deletion | 38273 | 4.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 57 | Cycle | Base Substitution | 38308 | 54.97 | 28.00 | 27.41 | 0.59 | After |
| REGRESSION.HCC1395_tumor.L003 | 57 | Cycle | Base Insertion | 38248 | 1.72 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 57 | Cycle | Base Deletion | 38248 | 4.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 58 | Cycle | Base Substitution | 38200 | 45.10 | 28.00 | 27.69 | 0.31 | After |
| REGRESSION.HCC1395_tumor.L003 | 58 | Cycle | Base Insertion | 38132 | 1.86 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 58 | Cycle | Base Deletion | 38132 | 4.17 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 59 | Cycle | Base Substitution | 38180 | 43.77 | 29.00 | 27.59 | 1.41 | After |
| REGRESSION.HCC1395_tumor.L003 | 59 | Cycle | Base Insertion | 38110 | 2.09 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 59 | Cycle | Base Deletion | 38110 | 4.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 6 | Cycle | Base Substitution | 38741 | 51.64 | 28.00 | 27.50 | 0.50 | After |
| REGRESSION.HCC1395_tumor.L003 | 6 | Cycle | Base Insertion | 38741 | 1.64 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 6 | Cycle | Base Deletion | 38741 | 2.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 60 | Cycle | Base Substitution | 38202 | 44.08 | 29.00 | 27.66 | 1.34 | After |
| REGRESSION.HCC1395_tumor.L003 | 60 | Cycle | Base Insertion | 38136 | 1.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 60 | Cycle | Base Deletion | 38136 | 4.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 61 | Cycle | Base Substitution | 38137 | 48.97 | 28.00 | 27.65 | 0.35 | After |
| REGRESSION.HCC1395_tumor.L003 | 61 | Cycle | Base Insertion | 38073 | 1.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 61 | Cycle | Base Deletion | 38073 | 3.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 62 | Cycle | Base Substitution | 38166 | 53.49 | 28.00 | 27.43 | 0.57 | After |
| REGRESSION.HCC1395_tumor.L003 | 62 | Cycle | Base Insertion | 38102 | 1.96 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 62 | Cycle | Base Deletion | 38102 | 4.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 63 | Cycle | Base Substitution | 38204 | 43.25 | 29.00 | 27.68 | 1.32 | After |
| REGRESSION.HCC1395_tumor.L003 | 63 | Cycle | Base Insertion | 38140 | 2.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 63 | Cycle | Base Deletion | 38140 | 4.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 64 | Cycle | Base Substitution | 38145 | 48.02 | 28.00 | 27.70 | 0.30 | After |
| REGRESSION.HCC1395_tumor.L003 | 64 | Cycle | Base Insertion | 38061 | 1.48 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 64 | Cycle | Base Deletion | 38061 | 4.38 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 65 | Cycle | Base Substitution | 38198 | 45.45 | 28.00 | 27.60 | 0.40 | After |
| REGRESSION.HCC1395_tumor.L003 | 65 | Cycle | Base Insertion | 38111 | 1.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 65 | Cycle | Base Deletion | 38111 | 3.98 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 66 | Cycle | Base Substitution | 38127 | 43.18 | 29.00 | 27.63 | 1.37 | After |
| REGRESSION.HCC1395_tumor.L003 | 66 | Cycle | Base Insertion | 38033 | 2.73 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 66 | Cycle | Base Deletion | 38033 | 3.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 67 | Cycle | Base Substitution | 38163 | 41.72 | 29.00 | 27.96 | 1.04 | After |
| REGRESSION.HCC1395_tumor.L003 | 67 | Cycle | Base Insertion | 38065 | 1.51 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 67 | Cycle | Base Deletion | 38065 | 3.86 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 68 | Cycle | Base Substitution | 37949 | 52.48 | 28.00 | 27.49 | 0.51 | After |
| REGRESSION.HCC1395_tumor.L003 | 68 | Cycle | Base Insertion | 37848 | 1.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 68 | Cycle | Base Deletion | 37848 | 5.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 69 | Cycle | Base Substitution | 37926 | 58.14 | 28.00 | 27.42 | 0.58 | After |
| REGRESSION.HCC1395_tumor.L003 | 69 | Cycle | Base Insertion | 37822 | 2.42 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 69 | Cycle | Base Deletion | 37822 | 6.10 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 7 | Cycle | Base Substitution | 38773 | 49.04 | 28.00 | 27.45 | 0.55 | After |
| REGRESSION.HCC1395_tumor.L003 | 7 | Cycle | Base Insertion | 38773 | 0.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 7 | Cycle | Base Deletion | 38773 | 1.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 70 | Cycle | Base Substitution | 38006 | 64.48 | 28.00 | 27.17 | 0.83 | After |
| REGRESSION.HCC1395_tumor.L003 | 70 | Cycle | Base Insertion | 37896 | 1.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 70 | Cycle | Base Deletion | 37896 | 5.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 71 | Cycle | Base Substitution | 38025 | 39.39 | 29.00 | 27.37 | 1.63 | After |
| REGRESSION.HCC1395_tumor.L003 | 71 | Cycle | Base Insertion | 37900 | 0.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 71 | Cycle | Base Deletion | 37900 | 5.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 72 | Cycle | Base Substitution | 37965 | 53.20 | 28.00 | 27.33 | 0.67 | After |
| REGRESSION.HCC1395_tumor.L003 | 72 | Cycle | Base Insertion | 37831 | 0.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 72 | Cycle | Base Deletion | 37831 | 4.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 73 | Cycle | Base Substitution | 37844 | 59.62 | 28.00 | 27.44 | 0.56 | After |
| REGRESSION.HCC1395_tumor.L003 | 73 | Cycle | Base Insertion | 37696 | 1.36 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 73 | Cycle | Base Deletion | 37696 | 4.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 74 | Cycle | Base Substitution | 37863 | 48.00 | 28.00 | 27.49 | 0.51 | After |
| REGRESSION.HCC1395_tumor.L003 | 74 | Cycle | Base Insertion | 37701 | 2.07 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 74 | Cycle | Base Deletion | 37701 | 6.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 75 | Cycle | Base Substitution | 37853 | 63.27 | 28.00 | 27.50 | 0.50 | After |
| REGRESSION.HCC1395_tumor.L003 | 75 | Cycle | Base Insertion | 37688 | 0.81 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 75 | Cycle | Base Deletion | 37688 | 4.79 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 76 | Cycle | Base Substitution | 37798 | 58.68 | 28.00 | 27.22 | 0.78 | After |
| REGRESSION.HCC1395_tumor.L003 | 76 | Cycle | Base Insertion | 37626 | 1.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 76 | Cycle | Base Deletion | 37626 | 4.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 77 | Cycle | Base Substitution | 37689 | 64.80 | 28.00 | 27.32 | 0.68 | After |
| REGRESSION.HCC1395_tumor.L003 | 77 | Cycle | Base Insertion | 37514 | 1.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 77 | Cycle | Base Deletion | 37514 | 4.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 78 | Cycle | Base Substitution | 37662 | 57.50 | 28.00 | 27.30 | 0.70 | After |
| REGRESSION.HCC1395_tumor.L003 | 78 | Cycle | Base Insertion | 37490 | 2.46 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 78 | Cycle | Base Deletion | 37490 | 4.09 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 79 | Cycle | Base Substitution | 37570 | 57.31 | 28.00 | 27.09 | 0.91 | After |
| REGRESSION.HCC1395_tumor.L003 | 79 | Cycle | Base Insertion | 37391 | 1.64 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 79 | Cycle | Base Deletion | 37391 | 4.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 8 | Cycle | Base Substitution | 38846 | 44.43 | 29.00 | 27.43 | 1.57 | After |
| REGRESSION.HCC1395_tumor.L003 | 8 | Cycle | Base Insertion | 38846 | 1.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 8 | Cycle | Base Deletion | 38846 | 1.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 80 | Cycle | Base Substitution | 37555 | 57.12 | 28.00 | 27.10 | 0.90 | After |
| REGRESSION.HCC1395_tumor.L003 | 80 | Cycle | Base Insertion | 37377 | 1.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 80 | Cycle | Base Deletion | 37377 | 4.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 81 | Cycle | Base Substitution | 37548 | 52.11 | 28.00 | 27.06 | 0.94 | After |
| REGRESSION.HCC1395_tumor.L003 | 81 | Cycle | Base Insertion | 37368 | 2.31 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 81 | Cycle | Base Deletion | 37368 | 4.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 82 | Cycle | Base Substitution | 37462 | 64.07 | 28.00 | 27.25 | 0.75 | After |
| REGRESSION.HCC1395_tumor.L003 | 82 | Cycle | Base Insertion | 37283 | 1.26 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 82 | Cycle | Base Deletion | 37283 | 4.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 83 | Cycle | Base Substitution | 37420 | 60.46 | 28.00 | 27.17 | 0.83 | After |
| REGRESSION.HCC1395_tumor.L003 | 83 | Cycle | Base Insertion | 37211 | 1.48 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 83 | Cycle | Base Deletion | 37211 | 4.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 84 | Cycle | Base Substitution | 37441 | 55.62 | 28.00 | 27.18 | 0.82 | After |
| REGRESSION.HCC1395_tumor.L003 | 84 | Cycle | Base Insertion | 37236 | 2.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 84 | Cycle | Base Deletion | 37236 | 4.02 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 85 | Cycle | Base Substitution | 37355 | 63.65 | 27.00 | 26.90 | 0.10 | After |
| REGRESSION.HCC1395_tumor.L003 | 85 | Cycle | Base Insertion | 37142 | 0.98 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 85 | Cycle | Base Deletion | 37142 | 4.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 86 | Cycle | Base Substitution | 37305 | 67.65 | 27.00 | 27.31 | -0.31 | After |
| REGRESSION.HCC1395_tumor.L003 | 86 | Cycle | Base Insertion | 37093 | 0.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 86 | Cycle | Base Deletion | 37093 | 4.44 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 87 | Cycle | Base Substitution | 37133 | 57.00 | 28.00 | 27.12 | 0.88 | After |
| REGRESSION.HCC1395_tumor.L003 | 87 | Cycle | Base Insertion | 36914 | 1.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 87 | Cycle | Base Deletion | 36914 | 3.94 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 88 | Cycle | Base Substitution | 37205 | 55.70 | 28.00 | 27.16 | 0.84 | After |
| REGRESSION.HCC1395_tumor.L003 | 88 | Cycle | Base Insertion | 36974 | 1.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 88 | Cycle | Base Deletion | 36974 | 3.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 89 | Cycle | Base Substitution | 37169 | 57.87 | 27.00 | 26.98 | 0.02 | After |
| REGRESSION.HCC1395_tumor.L003 | 89 | Cycle | Base Insertion | 36933 | 1.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 89 | Cycle | Base Deletion | 36933 | 3.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 9 | Cycle | Base Substitution | 38872 | 43.40 | 29.00 | 27.66 | 1.34 | After |
| REGRESSION.HCC1395_tumor.L003 | 9 | Cycle | Base Insertion | 38872 | 1.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 9 | Cycle | Base Deletion | 38872 | 1.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 90 | Cycle | Base Substitution | 37107 | 56.00 | 28.00 | 27.07 | 0.93 | After |
| REGRESSION.HCC1395_tumor.L003 | 90 | Cycle | Base Insertion | 36871 | 2.26 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 90 | Cycle | Base Deletion | 36871 | 2.73 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 91 | Cycle | Base Substitution | 36920 | 55.88 | 28.00 | 27.09 | 0.91 | After |
| REGRESSION.HCC1395_tumor.L003 | 91 | Cycle | Base Insertion | 36665 | 4.38 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 91 | Cycle | Base Deletion | 36665 | 2.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 92 | Cycle | Base Substitution | 36866 | 63.35 | 27.00 | 26.92 | 0.08 | After |
| REGRESSION.HCC1395_tumor.L003 | 92 | Cycle | Base Insertion | 36598 | 1.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 92 | Cycle | Base Deletion | 36598 | 2.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 93 | Cycle | Base Substitution | 36883 | 63.63 | 27.00 | 26.87 | 0.13 | After |
| REGRESSION.HCC1395_tumor.L003 | 93 | Cycle | Base Insertion | 36615 | 2.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 93 | Cycle | Base Deletion | 36615 | 3.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 94 | Cycle | Base Substitution | 36821 | 74.45 | 27.00 | 26.48 | 0.52 | After |
| REGRESSION.HCC1395_tumor.L003 | 94 | Cycle | Base Insertion | 36538 | 1.51 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 94 | Cycle | Base Deletion | 36538 | 3.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 95 | Cycle | Base Substitution | 36785 | 59.49 | 27.00 | 26.81 | 0.19 | After |
| REGRESSION.HCC1395_tumor.L003 | 95 | Cycle | Base Insertion | 36505 | 2.51 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 95 | Cycle | Base Deletion | 36505 | 3.46 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 96 | Cycle | Base Substitution | 36688 | 62.66 | 27.00 | 26.88 | 0.12 | After |
| REGRESSION.HCC1395_tumor.L003 | 96 | Cycle | Base Insertion | 36410 | 1.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 96 | Cycle | Base Deletion | 36410 | 3.18 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 97 | Cycle | Base Substitution | 36652 | 66.87 | 27.00 | 26.97 | 0.03 | After |
| REGRESSION.HCC1395_tumor.L003 | 97 | Cycle | Base Insertion | 36353 | 2.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 97 | Cycle | Base Deletion | 36353 | 2.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 98 | Cycle | Base Substitution | 36543 | 70.06 | 27.00 | 26.85 | 0.15 | After |
| REGRESSION.HCC1395_tumor.L003 | 98 | Cycle | Base Insertion | 36246 | 1.26 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 98 | Cycle | Base Deletion | 36246 | 3.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 99 | Cycle | Base Substitution | 36367 | 67.82 | 27.00 | 26.93 | 0.07 | After |
| REGRESSION.HCC1395_tumor.L003 | 99 | Cycle | Base Insertion | 36080 | 2.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 99 | Cycle | Base Deletion | 36080 | 3.46 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 10 | QualityScore | Base Substitution | 14154 | 1499.70 | 10.00 | 10.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 11 | QualityScore | Base Substitution | 13813 | 1045.67 | 11.00 | 11.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 12 | QualityScore | Base Substitution | 22095 | 1266.39 | 12.00 | 12.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 13 | QualityScore | Base Substitution | 6728 | 76.29 | 17.00 | 13.00 | 4.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 14 | QualityScore | Base Substitution | 24897 | 328.60 | 18.00 | 14.00 | 4.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 15 | QualityScore | Base Substitution | 17622 | 9.10 | 22.00 | 15.00 | 7.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 16 | QualityScore | Base Substitution | 14385 | 1.93 | 22.00 | 16.00 | 6.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 22 | QualityScore | Base Substitution | 8045 | 2.08 | 24.00 | 22.00 | 2.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 23 | QualityScore | Base Substitution | 109904 | 674.79 | 22.00 | 23.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 24 | QualityScore | Base Substitution | 97766 | 386.35 | 24.00 | 24.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 25 | QualityScore | Base Substitution | 125212 | 236.12 | 27.00 | 25.00 | 2.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 28 | QualityScore | Base Substitution | 7801 | 2.44 | 28.00 | 28.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 29 | QualityScore | Base Substitution | 58116 | 97.26 | 28.00 | 29.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 30 | QualityScore | Base Substitution | 2484937 | 1492.11 | 32.00 | 30.00 | 2.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 31 | QualityScore | Base Substitution | 2859834 | 1267.84 | 33.00 | 31.00 | 2.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 32 | QualityScore | Base Substitution | 4655340 | 1086.64 | 36.00 | 32.00 | 4.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 33 | QualityScore | Base Substitution | 416165 | 59.91 | 36.00 | 33.00 | 3.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 45 | QualityScore | Base Insertion | 11004283 | 500.59 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 45 | QualityScore | Base Deletion | 11004283 | 1007.22 | 41.00 | 45.00 | -4.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 8 | QualityScore | Base Substitution | 4583 | 836.73 | 7.00 | 8.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L003 | 9 | QualityScore | Base Substitution | 62886 | 8361.47 | 9.00 | 9.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | AA | Context | Base Substitution | 840420 | 1819.91 | 27.00 | 25.51 | 1.49 | After |
| REGRESSION.HCC1395_tumor.L004 | AAA | Context | Base Insertion | 299379 | 58.58 | 43.00 | 45.00 | -2.00 | After |
| REGRESSION.HCC1395_tumor.L004 | AAA | Context | Base Deletion | 299379 | 213.29 | 37.00 | 45.00 | -8.00 | After |
| REGRESSION.HCC1395_tumor.L004 | AAC | Context | Base Insertion | 133382 | 4.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | AAC | Context | Base Deletion | 133382 | 7.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | AAG | Context | Base Insertion | 198880 | 7.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | AAG | Context | Base Deletion | 198880 | 8.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | AAT | Context | Base Insertion | 175201 | 1.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | AAT | Context | Base Deletion | 175201 | 12.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | AC | Context | Base Substitution | 533093 | 1877.51 | 25.00 | 24.77 | 0.23 | After |
| REGRESSION.HCC1395_tumor.L004 | ACA | Context | Base Insertion | 205248 | 18.96 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L004 | ACA | Context | Base Deletion | 205248 | 40.25 | 43.00 | 45.00 | -2.00 | After |
| REGRESSION.HCC1395_tumor.L004 | ACC | Context | Base Insertion | 146754 | 7.72 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | ACC | Context | Base Deletion | 146754 | 6.07 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | ACG | Context | Base Insertion | 30601 | 1.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | ACG | Context | Base Deletion | 30601 | 4.18 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | ACT | Context | Base Insertion | 159224 | 1.46 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | ACT | Context | Base Deletion | 159224 | 15.24 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L004 | AG | Context | Base Substitution | 801265 | 608.75 | 31.00 | 28.76 | 2.24 | After |
| REGRESSION.HCC1395_tumor.L004 | AGA | Context | Base Insertion | 222556 | 5.56 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | AGA | Context | Base Deletion | 222556 | 11.61 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | AGC | Context | Base Insertion | 191951 | 2.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | AGC | Context | Base Deletion | 191951 | 5.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | AGG | Context | Base Insertion | 227004 | 14.26 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | AGG | Context | Base Deletion | 227004 | 7.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | AGT | Context | Base Insertion | 155744 | 2.44 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | AGT | Context | Base Deletion | 155744 | 5.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | AT | Context | Base Substitution | 604924 | 644.17 | 30.00 | 27.65 | 2.35 | After |
| REGRESSION.HCC1395_tumor.L004 | ATA | Context | Base Insertion | 135568 | 8.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | ATA | Context | Base Deletion | 135568 | 5.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | ATC | Context | Base Insertion | 121600 | 1.10 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | ATC | Context | Base Deletion | 121600 | 5.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | ATG | Context | Base Insertion | 174839 | 2.88 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | ATG | Context | Base Deletion | 174839 | 1.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | ATT | Context | Base Insertion | 183259 | 3.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | ATT | Context | Base Deletion | 183259 | 7.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | CA | Context | Base Substitution | 857273 | 1792.98 | 27.00 | 26.57 | 0.43 | After |
| REGRESSION.HCC1395_tumor.L004 | CAA | Context | Base Insertion | 172903 | 6.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | CAA | Context | Base Deletion | 172903 | 11.38 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | CAC | Context | Base Insertion | 183757 | 21.83 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L004 | CAC | Context | Base Deletion | 183757 | 39.32 | 43.00 | 45.00 | -2.00 | After |
| REGRESSION.HCC1395_tumor.L004 | CAG | Context | Base Insertion | 291935 | 9.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | CAG | Context | Base Deletion | 291935 | 11.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | CAT | Context | Base Insertion | 170525 | 7.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | CAT | Context | Base Deletion | 170525 | 3.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | CC | Context | Base Substitution | 763428 | 2408.13 | 25.00 | 24.70 | 0.30 | After |
| REGRESSION.HCC1395_tumor.L004 | CCA | Context | Base Insertion | 244632 | 4.17 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | CCA | Context | Base Deletion | 244632 | 8.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | CCC | Context | Base Insertion | 211428 | 16.46 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L004 | CCC | Context | Base Deletion | 211428 | 18.25 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L004 | CCG | Context | Base Insertion | 53771 | 3.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | CCG | Context | Base Deletion | 53771 | 7.18 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | CCT | Context | Base Insertion | 243315 | 1.85 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | CCT | Context | Base Deletion | 243315 | 12.02 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | CG | Context | Base Substitution | 160566 | 504.12 | 25.00 | 25.54 | -0.54 | After |
| REGRESSION.HCC1395_tumor.L004 | CGA | Context | Base Insertion | 55907 | 2.86 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | CGA | Context | Base Deletion | 55907 | 0.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | CGC | Context | Base Insertion | 79961 | 3.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | CGC | Context | Base Deletion | 79961 | 6.84 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | CGG | Context | Base Insertion | 97386 | 2.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | CGG | Context | Base Deletion | 97386 | 8.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | CGT | Context | Base Insertion | 62763 | 1.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | CGT | Context | Base Deletion | 62763 | 3.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | CT | Context | Base Substitution | 841332 | 407.65 | 33.00 | 29.41 | 3.59 | After |
| REGRESSION.HCC1395_tumor.L004 | CTA | Context | Base Insertion | 97155 | 0.48 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | CTA | Context | Base Deletion | 97155 | 8.48 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | CTC | Context | Base Insertion | 201889 | 6.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | CTC | Context | Base Deletion | 201889 | 19.84 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L004 | CTG | Context | Base Insertion | 294162 | 2.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | CTG | Context | Base Deletion | 294162 | 13.36 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | CTT | Context | Base Insertion | 210395 | 6.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | CTT | Context | Base Deletion | 210395 | 9.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | GA | Context | Base Substitution | 703908 | 998.47 | 28.00 | 26.99 | 1.01 | After |
| REGRESSION.HCC1395_tumor.L004 | GAA | Context | Base Insertion | 209675 | 6.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | GAA | Context | Base Deletion | 209675 | 9.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | GAC | Context | Base Insertion | 118642 | 2.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | GAC | Context | Base Deletion | 118642 | 7.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | GAG | Context | Base Insertion | 207856 | 3.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | GAG | Context | Base Deletion | 207856 | 11.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | GAT | Context | Base Insertion | 125336 | 0.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | GAT | Context | Base Deletion | 125336 | 2.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | GC | Context | Base Substitution | 661319 | 1460.12 | 27.00 | 26.03 | 0.97 | After |
| REGRESSION.HCC1395_tumor.L004 | GCA | Context | Base Insertion | 204546 | 8.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | GCA | Context | Base Deletion | 204546 | 5.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | GCC | Context | Base Insertion | 198787 | 4.46 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | GCC | Context | Base Deletion | 198787 | 10.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | GCG | Context | Base Insertion | 48936 | 2.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | GCG | Context | Base Deletion | 48936 | 4.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | GCT | Context | Base Insertion | 208859 | 2.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | GCT | Context | Base Deletion | 208859 | 3.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | GG | Context | Base Substitution | 789136 | 748.11 | 30.00 | 27.77 | 2.23 | After |
| REGRESSION.HCC1395_tumor.L004 | GGA | Context | Base Insertion | 214775 | 15.81 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L004 | GGA | Context | Base Deletion | 214775 | 13.56 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | GGC | Context | Base Insertion | 195950 | 3.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | GGC | Context | Base Deletion | 195950 | 4.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | GGG | Context | Base Insertion | 218079 | 12.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | GGG | Context | Base Deletion | 218079 | 30.08 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L004 | GGT | Context | Base Insertion | 157875 | 2.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | GGT | Context | Base Deletion | 157875 | 4.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | GT | Context | Base Substitution | 591466 | 1055.65 | 27.00 | 27.01 | -0.01 | After |
| REGRESSION.HCC1395_tumor.L004 | GTA | Context | Base Insertion | 101929 | 2.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | GTA | Context | Base Deletion | 101929 | 1.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | GTC | Context | Base Insertion | 127167 | 2.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | GTC | Context | Base Deletion | 127167 | 5.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | GTG | Context | Base Insertion | 199940 | 15.51 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L004 | GTG | Context | Base Deletion | 199940 | 35.94 | 43.00 | 45.00 | -2.00 | After |
| REGRESSION.HCC1395_tumor.L004 | GTT | Context | Base Insertion | 150161 | 4.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | GTT | Context | Base Deletion | 150161 | 13.38 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | TA | Context | Base Substitution | 486729 | 1134.34 | 26.00 | 25.57 | 0.43 | After |
| REGRESSION.HCC1395_tumor.L004 | TAA | Context | Base Insertion | 151222 | 10.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | TAA | Context | Base Deletion | 151222 | 15.62 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L004 | TAC | Context | Base Insertion | 93969 | 0.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | TAC | Context | Base Deletion | 93969 | 5.77 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | TAG | Context | Base Insertion | 96344 | 1.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | TAG | Context | Base Deletion | 96344 | 1.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | TAT | Context | Base Insertion | 129610 | 1.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | TAT | Context | Base Deletion | 129610 | 4.94 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | TC | Context | Base Substitution | 648909 | 1635.03 | 26.00 | 25.61 | 0.39 | After |
| REGRESSION.HCC1395_tumor.L004 | TCA | Context | Base Insertion | 196206 | 5.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | TCA | Context | Base Deletion | 196206 | 15.31 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L004 | TCC | Context | Base Insertion | 201415 | 36.22 | 43.00 | 45.00 | -2.00 | After |
| REGRESSION.HCC1395_tumor.L004 | TCC | Context | Base Deletion | 201415 | 9.21 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | TCG | Context | Base Insertion | 26107 | 0.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | TCG | Context | Base Deletion | 26107 | 1.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | TCT | Context | Base Insertion | 224175 | 6.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | TCT | Context | Base Deletion | 224175 | 15.61 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L004 | TG | Context | Base Substitution | 846201 | 350.68 | 33.00 | 29.46 | 3.54 | After |
| REGRESSION.HCC1395_tumor.L004 | TGA | Context | Base Insertion | 205246 | 1.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | TGA | Context | Base Deletion | 205246 | 5.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | TGC | Context | Base Insertion | 189323 | 3.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | TGC | Context | Base Deletion | 189323 | 6.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | TGG | Context | Base Insertion | 240755 | 4.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | TGG | Context | Base Deletion | 240755 | 7.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | TGT | Context | Base Insertion | 211274 | 17.07 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L004 | TGT | Context | Base Deletion | 211274 | 38.99 | 43.00 | 45.00 | -2.00 | After |
| REGRESSION.HCC1395_tumor.L004 | TT | Context | Base Substitution | 846315 | 916.06 | 30.00 | 28.29 | 1.71 | After |
| REGRESSION.HCC1395_tumor.L004 | TTA | Context | Base Insertion | 148420 | 5.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | TTA | Context | Base Deletion | 148420 | 9.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | TTC | Context | Base Insertion | 194295 | 2.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | TTC | Context | Base Deletion | 194295 | 12.56 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | TTG | Context | Base Insertion | 171321 | 2.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | TTG | Context | Base Deletion | 171321 | 7.99 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | TTT | Context | Base Insertion | 296796 | 58.28 | 43.00 | 45.00 | -2.00 | After |
| REGRESSION.HCC1395_tumor.L004 | TTT | Context | Base Deletion | 296796 | 170.81 | 38.00 | 45.00 | -7.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -1 | Cycle | Base Substitution | 38617 | 154.19 | 24.00 | 23.45 | 0.55 | After |
| REGRESSION.HCC1395_tumor.L004 | -10 | Cycle | Base Substitution | 38915 | 43.82 | 29.00 | 27.66 | 1.34 | After |
| REGRESSION.HCC1395_tumor.L004 | -10 | Cycle | Base Insertion | 38915 | 0.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -10 | Cycle | Base Deletion | 38915 | 2.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -100 | Cycle | Base Substitution | 36515 | 77.24 | 27.00 | 26.44 | 0.56 | After |
| REGRESSION.HCC1395_tumor.L004 | -100 | Cycle | Base Insertion | 36235 | 1.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -100 | Cycle | Base Deletion | 36235 | 3.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -101 | Cycle | Base Substitution | 36423 | 75.47 | 27.00 | 26.63 | 0.37 | After |
| REGRESSION.HCC1395_tumor.L004 | -101 | Cycle | Base Insertion | 36120 | 2.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -101 | Cycle | Base Deletion | 36120 | 4.29 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -102 | Cycle | Base Substitution | 36536 | 83.04 | 26.00 | 26.90 | -0.90 | After |
| REGRESSION.HCC1395_tumor.L004 | -102 | Cycle | Base Insertion | 36211 | 1.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -102 | Cycle | Base Deletion | 36211 | 3.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -103 | Cycle | Base Substitution | 36491 | 67.25 | 27.00 | 26.64 | 0.36 | After |
| REGRESSION.HCC1395_tumor.L004 | -103 | Cycle | Base Insertion | 36139 | 1.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -103 | Cycle | Base Deletion | 36139 | 3.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -104 | Cycle | Base Substitution | 36250 | 93.86 | 26.00 | 26.38 | -0.38 | After |
| REGRESSION.HCC1395_tumor.L004 | -104 | Cycle | Base Insertion | 35908 | 2.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -104 | Cycle | Base Deletion | 35908 | 3.29 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -105 | Cycle | Base Substitution | 36234 | 86.07 | 26.00 | 26.59 | -0.59 | After |
| REGRESSION.HCC1395_tumor.L004 | -105 | Cycle | Base Insertion | 35913 | 2.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -105 | Cycle | Base Deletion | 35913 | 3.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -106 | Cycle | Base Substitution | 36143 | 80.27 | 27.00 | 26.57 | 0.43 | After |
| REGRESSION.HCC1395_tumor.L004 | -106 | Cycle | Base Insertion | 35810 | 1.30 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -106 | Cycle | Base Deletion | 35810 | 2.81 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -107 | Cycle | Base Substitution | 35885 | 77.94 | 27.00 | 26.39 | 0.61 | After |
| REGRESSION.HCC1395_tumor.L004 | -107 | Cycle | Base Insertion | 35572 | 1.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -107 | Cycle | Base Deletion | 35572 | 3.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -108 | Cycle | Base Substitution | 35888 | 72.11 | 27.00 | 26.59 | 0.41 | After |
| REGRESSION.HCC1395_tumor.L004 | -108 | Cycle | Base Insertion | 35571 | 1.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -108 | Cycle | Base Deletion | 35571 | 3.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -109 | Cycle | Base Substitution | 35795 | 84.37 | 26.00 | 26.47 | -0.47 | After |
| REGRESSION.HCC1395_tumor.L004 | -109 | Cycle | Base Insertion | 35466 | 1.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -109 | Cycle | Base Deletion | 35466 | 3.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -11 | Cycle | Base Substitution | 38847 | 48.59 | 28.00 | 27.62 | 0.38 | After |
| REGRESSION.HCC1395_tumor.L004 | -11 | Cycle | Base Insertion | 38846 | 1.79 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -11 | Cycle | Base Deletion | 38846 | 2.44 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -110 | Cycle | Base Substitution | 35679 | 79.85 | 26.00 | 26.42 | -0.42 | After |
| REGRESSION.HCC1395_tumor.L004 | -110 | Cycle | Base Insertion | 35330 | 1.02 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -110 | Cycle | Base Deletion | 35330 | 3.81 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -111 | Cycle | Base Substitution | 35692 | 81.54 | 26.00 | 26.66 | -0.66 | After |
| REGRESSION.HCC1395_tumor.L004 | -111 | Cycle | Base Insertion | 35346 | 1.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -111 | Cycle | Base Deletion | 35346 | 4.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -112 | Cycle | Base Substitution | 35591 | 87.58 | 26.00 | 26.30 | -0.30 | After |
| REGRESSION.HCC1395_tumor.L004 | -112 | Cycle | Base Insertion | 35259 | 1.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -112 | Cycle | Base Deletion | 35259 | 4.51 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -113 | Cycle | Base Substitution | 35376 | 75.22 | 27.00 | 26.31 | 0.69 | After |
| REGRESSION.HCC1395_tumor.L004 | -113 | Cycle | Base Insertion | 35023 | 1.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -113 | Cycle | Base Deletion | 35023 | 5.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -114 | Cycle | Base Substitution | 35450 | 76.58 | 27.00 | 26.46 | 0.54 | After |
| REGRESSION.HCC1395_tumor.L004 | -114 | Cycle | Base Insertion | 35118 | 1.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -114 | Cycle | Base Deletion | 35118 | 5.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -115 | Cycle | Base Substitution | 35262 | 84.52 | 26.00 | 26.48 | -0.48 | After |
| REGRESSION.HCC1395_tumor.L004 | -115 | Cycle | Base Insertion | 34908 | 1.47 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -115 | Cycle | Base Deletion | 34908 | 4.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -116 | Cycle | Base Substitution | 35267 | 76.16 | 27.00 | 26.43 | 0.57 | After |
| REGRESSION.HCC1395_tumor.L004 | -116 | Cycle | Base Insertion | 34929 | 1.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -116 | Cycle | Base Deletion | 34929 | 3.38 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -117 | Cycle | Base Substitution | 35013 | 93.43 | 26.00 | 26.42 | -0.42 | After |
| REGRESSION.HCC1395_tumor.L004 | -117 | Cycle | Base Insertion | 34675 | 1.31 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -117 | Cycle | Base Deletion | 34675 | 3.51 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -118 | Cycle | Base Substitution | 35073 | 82.62 | 26.00 | 26.13 | -0.13 | After |
| REGRESSION.HCC1395_tumor.L004 | -118 | Cycle | Base Insertion | 34751 | 1.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -118 | Cycle | Base Deletion | 34751 | 3.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -119 | Cycle | Base Substitution | 35103 | 97.20 | 26.00 | 26.36 | -0.36 | After |
| REGRESSION.HCC1395_tumor.L004 | -119 | Cycle | Base Insertion | 34779 | 2.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -119 | Cycle | Base Deletion | 34779 | 2.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -12 | Cycle | Base Substitution | 38944 | 47.71 | 28.00 | 27.75 | 0.25 | After |
| REGRESSION.HCC1395_tumor.L004 | -12 | Cycle | Base Insertion | 38943 | 0.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -12 | Cycle | Base Deletion | 38943 | 3.46 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -120 | Cycle | Base Substitution | 34903 | 88.57 | 26.00 | 26.43 | -0.43 | After |
| REGRESSION.HCC1395_tumor.L004 | -120 | Cycle | Base Insertion | 34560 | 1.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -120 | Cycle | Base Deletion | 34560 | 2.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -121 | Cycle | Base Substitution | 34747 | 67.39 | 27.00 | 26.40 | 0.60 | After |
| REGRESSION.HCC1395_tumor.L004 | -121 | Cycle | Base Insertion | 34391 | 1.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -121 | Cycle | Base Deletion | 34391 | 2.37 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -122 | Cycle | Base Substitution | 34796 | 92.29 | 26.00 | 26.19 | -0.19 | After |
| REGRESSION.HCC1395_tumor.L004 | -122 | Cycle | Base Insertion | 34417 | 1.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -122 | Cycle | Base Deletion | 34417 | 2.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -123 | Cycle | Base Substitution | 34655 | 87.16 | 26.00 | 26.28 | -0.28 | After |
| REGRESSION.HCC1395_tumor.L004 | -123 | Cycle | Base Insertion | 34238 | 1.21 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -123 | Cycle | Base Deletion | 34238 | 2.48 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -124 | Cycle | Base Substitution | 34604 | 79.89 | 26.00 | 26.43 | -0.43 | After |
| REGRESSION.HCC1395_tumor.L004 | -124 | Cycle | Base Insertion | 34179 | 1.86 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -124 | Cycle | Base Deletion | 34179 | 3.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -125 | Cycle | Base Substitution | 34390 | 78.51 | 26.00 | 26.36 | -0.36 | After |
| REGRESSION.HCC1395_tumor.L004 | -125 | Cycle | Base Insertion | 33961 | 1.61 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -125 | Cycle | Base Deletion | 33961 | 3.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -126 | Cycle | Base Substitution | 34348 | 81.70 | 26.00 | 26.38 | -0.38 | After |
| REGRESSION.HCC1395_tumor.L004 | -126 | Cycle | Base Insertion | 33915 | 0.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -126 | Cycle | Base Deletion | 33915 | 3.29 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -127 | Cycle | Base Substitution | 34283 | 79.16 | 26.00 | 26.45 | -0.45 | After |
| REGRESSION.HCC1395_tumor.L004 | -127 | Cycle | Base Insertion | 33858 | 0.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -127 | Cycle | Base Deletion | 33858 | 2.86 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -128 | Cycle | Base Substitution | 34111 | 79.16 | 26.00 | 26.22 | -0.22 | After |
| REGRESSION.HCC1395_tumor.L004 | -128 | Cycle | Base Insertion | 33699 | 0.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -128 | Cycle | Base Deletion | 33699 | 2.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -129 | Cycle | Base Substitution | 34030 | 89.89 | 26.00 | 26.42 | -0.42 | After |
| REGRESSION.HCC1395_tumor.L004 | -129 | Cycle | Base Insertion | 33596 | 2.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -129 | Cycle | Base Deletion | 33596 | 2.36 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -13 | Cycle | Base Substitution | 38912 | 54.55 | 28.00 | 27.85 | 0.15 | After |
| REGRESSION.HCC1395_tumor.L004 | -13 | Cycle | Base Insertion | 38911 | 2.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -13 | Cycle | Base Deletion | 38911 | 3.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -130 | Cycle | Base Substitution | 33912 | 78.56 | 26.00 | 26.06 | -0.06 | After |
| REGRESSION.HCC1395_tumor.L004 | -130 | Cycle | Base Insertion | 33517 | 0.94 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -130 | Cycle | Base Deletion | 33517 | 3.07 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -131 | Cycle | Base Substitution | 33779 | 68.22 | 27.00 | 26.28 | 0.72 | After |
| REGRESSION.HCC1395_tumor.L004 | -131 | Cycle | Base Insertion | 33372 | 2.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -131 | Cycle | Base Deletion | 33372 | 3.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -132 | Cycle | Base Substitution | 33747 | 67.76 | 27.00 | 26.34 | 0.66 | After |
| REGRESSION.HCC1395_tumor.L004 | -132 | Cycle | Base Insertion | 33329 | 0.99 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -132 | Cycle | Base Deletion | 33329 | 3.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -133 | Cycle | Base Substitution | 33615 | 85.24 | 26.00 | 26.23 | -0.23 | After |
| REGRESSION.HCC1395_tumor.L004 | -133 | Cycle | Base Insertion | 33196 | 1.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -133 | Cycle | Base Deletion | 33196 | 1.82 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -134 | Cycle | Base Substitution | 33573 | 71.45 | 27.00 | 26.44 | 0.56 | After |
| REGRESSION.HCC1395_tumor.L004 | -134 | Cycle | Base Insertion | 33141 | 2.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -134 | Cycle | Base Deletion | 33141 | 2.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -135 | Cycle | Base Substitution | 33385 | 80.50 | 26.00 | 26.49 | -0.49 | After |
| REGRESSION.HCC1395_tumor.L004 | -135 | Cycle | Base Insertion | 32955 | 0.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -135 | Cycle | Base Deletion | 32955 | 2.09 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -136 | Cycle | Base Substitution | 33303 | 73.52 | 26.00 | 26.41 | -0.41 | After |
| REGRESSION.HCC1395_tumor.L004 | -136 | Cycle | Base Insertion | 32880 | 0.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -136 | Cycle | Base Deletion | 32880 | 1.95 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -137 | Cycle | Base Substitution | 33230 | 78.75 | 26.00 | 26.50 | -0.50 | After |
| REGRESSION.HCC1395_tumor.L004 | -137 | Cycle | Base Insertion | 32788 | 0.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -137 | Cycle | Base Deletion | 32788 | 1.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -138 | Cycle | Base Substitution | 33055 | 70.45 | 27.00 | 26.29 | 0.71 | After |
| REGRESSION.HCC1395_tumor.L004 | -138 | Cycle | Base Insertion | 32630 | 0.46 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -138 | Cycle | Base Deletion | 32630 | 2.09 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -139 | Cycle | Base Substitution | 32993 | 85.36 | 26.00 | 26.02 | -0.02 | After |
| REGRESSION.HCC1395_tumor.L004 | -139 | Cycle | Base Insertion | 32526 | 0.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -139 | Cycle | Base Deletion | 32526 | 2.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -14 | Cycle | Base Substitution | 38846 | 55.77 | 28.00 | 27.89 | 0.11 | After |
| REGRESSION.HCC1395_tumor.L004 | -14 | Cycle | Base Insertion | 38845 | 0.98 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -14 | Cycle | Base Deletion | 38845 | 2.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -140 | Cycle | Base Substitution | 32817 | 71.08 | 27.00 | 26.24 | 0.76 | After |
| REGRESSION.HCC1395_tumor.L004 | -140 | Cycle | Base Insertion | 32324 | 0.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -140 | Cycle | Base Deletion | 32324 | 2.44 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -141 | Cycle | Base Substitution | 32729 | 79.58 | 26.00 | 26.41 | -0.41 | After |
| REGRESSION.HCC1395_tumor.L004 | -141 | Cycle | Base Insertion | 32192 | 1.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -141 | Cycle | Base Deletion | 32192 | 1.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -142 | Cycle | Base Substitution | 32734 | 67.99 | 27.00 | 26.39 | 0.61 | After |
| REGRESSION.HCC1395_tumor.L004 | -142 | Cycle | Base Insertion | 32134 | 0.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -142 | Cycle | Base Deletion | 32134 | 1.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -143 | Cycle | Base Substitution | 32478 | 79.26 | 26.00 | 26.30 | -0.30 | After |
| REGRESSION.HCC1395_tumor.L004 | -143 | Cycle | Base Insertion | 31830 | 0.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -143 | Cycle | Base Deletion | 31830 | 1.26 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -144 | Cycle | Base Substitution | 32403 | 72.91 | 26.00 | 26.22 | -0.22 | After |
| REGRESSION.HCC1395_tumor.L004 | -144 | Cycle | Base Insertion | 31712 | 0.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -144 | Cycle | Base Deletion | 31712 | 0.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -145 | Cycle | Base Substitution | 32365 | 58.05 | 27.00 | 26.23 | 0.77 | After |
| REGRESSION.HCC1395_tumor.L004 | -145 | Cycle | Base Insertion | 24940 | 0.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -145 | Cycle | Base Deletion | 24940 | 0.46 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -146 | Cycle | Base Substitution | 32183 | 22.92 | 28.00 | 26.11 | 1.89 | After |
| REGRESSION.HCC1395_tumor.L004 | -146 | Cycle | Base Insertion | 24891 | 0.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -146 | Cycle | Base Deletion | 24891 | 0.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -147 | Cycle | Base Substitution | 31963 | 19.76 | 26.00 | 22.36 | 3.64 | After |
| REGRESSION.HCC1395_tumor.L004 | -148 | Cycle | Base Substitution | 31688 | 26.02 | 24.00 | 16.13 | 7.87 | After |
| REGRESSION.HCC1395_tumor.L004 | -149 | Cycle | Base Substitution | 19803 | 27.84 | 21.00 | 14.18 | 6.82 | After |
| REGRESSION.HCC1395_tumor.L004 | -15 | Cycle | Base Substitution | 38940 | 36.05 | 29.00 | 27.91 | 1.09 | After |
| REGRESSION.HCC1395_tumor.L004 | -15 | Cycle | Base Insertion | 38940 | 1.98 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -15 | Cycle | Base Deletion | 38940 | 2.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -150 | Cycle | Base Substitution | 6872 | 23.87 | 25.00 | 25.87 | -0.87 | After |
| REGRESSION.HCC1395_tumor.L004 | -16 | Cycle | Base Substitution | 38971 | 55.77 | 28.00 | 27.84 | 0.16 | After |
| REGRESSION.HCC1395_tumor.L004 | -16 | Cycle | Base Insertion | 38971 | 2.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -16 | Cycle | Base Deletion | 38971 | 4.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -17 | Cycle | Base Substitution | 38881 | 49.25 | 28.00 | 27.81 | 0.19 | After |
| REGRESSION.HCC1395_tumor.L004 | -17 | Cycle | Base Insertion | 38881 | 1.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -17 | Cycle | Base Deletion | 38881 | 3.95 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -18 | Cycle | Base Substitution | 38722 | 53.45 | 28.00 | 27.93 | 0.07 | After |
| REGRESSION.HCC1395_tumor.L004 | -18 | Cycle | Base Insertion | 38722 | 1.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -18 | Cycle | Base Deletion | 38722 | 5.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -19 | Cycle | Base Substitution | 38797 | 63.62 | 28.00 | 27.49 | 0.51 | After |
| REGRESSION.HCC1395_tumor.L004 | -19 | Cycle | Base Insertion | 38797 | 1.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -19 | Cycle | Base Deletion | 38797 | 4.42 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -2 | Cycle | Base Substitution | 39034 | 122.32 | 25.00 | 25.75 | -0.75 | After |
| REGRESSION.HCC1395_tumor.L004 | -20 | Cycle | Base Substitution | 38814 | 66.46 | 28.00 | 28.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -20 | Cycle | Base Insertion | 38814 | 2.95 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -20 | Cycle | Base Deletion | 38814 | 3.82 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -21 | Cycle | Base Substitution | 38815 | 45.95 | 28.00 | 27.84 | 0.16 | After |
| REGRESSION.HCC1395_tumor.L004 | -21 | Cycle | Base Insertion | 38815 | 1.73 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -21 | Cycle | Base Deletion | 38815 | 4.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -22 | Cycle | Base Substitution | 38846 | 43.22 | 29.00 | 27.92 | 1.08 | After |
| REGRESSION.HCC1395_tumor.L004 | -22 | Cycle | Base Insertion | 38846 | 1.64 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -22 | Cycle | Base Deletion | 38846 | 4.86 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -23 | Cycle | Base Substitution | 38903 | 59.42 | 28.00 | 27.73 | 0.27 | After |
| REGRESSION.HCC1395_tumor.L004 | -23 | Cycle | Base Insertion | 38903 | 2.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -23 | Cycle | Base Deletion | 38903 | 4.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -24 | Cycle | Base Substitution | 38778 | 51.19 | 28.00 | 27.81 | 0.19 | After |
| REGRESSION.HCC1395_tumor.L004 | -24 | Cycle | Base Insertion | 38778 | 1.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -24 | Cycle | Base Deletion | 38778 | 4.30 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -25 | Cycle | Base Substitution | 38735 | 50.05 | 28.00 | 27.71 | 0.29 | After |
| REGRESSION.HCC1395_tumor.L004 | -25 | Cycle | Base Insertion | 38735 | 1.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -25 | Cycle | Base Deletion | 38735 | 4.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -26 | Cycle | Base Substitution | 38728 | 50.37 | 28.00 | 26.86 | 1.14 | After |
| REGRESSION.HCC1395_tumor.L004 | -26 | Cycle | Base Insertion | 38728 | 1.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -26 | Cycle | Base Deletion | 38728 | 4.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -27 | Cycle | Base Substitution | 38803 | 54.73 | 28.00 | 26.85 | 1.15 | After |
| REGRESSION.HCC1395_tumor.L004 | -27 | Cycle | Base Insertion | 38803 | 1.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -27 | Cycle | Base Deletion | 38803 | 4.31 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -28 | Cycle | Base Substitution | 38721 | 57.30 | 28.00 | 27.07 | 0.93 | After |
| REGRESSION.HCC1395_tumor.L004 | -28 | Cycle | Base Insertion | 38719 | 1.51 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -28 | Cycle | Base Deletion | 38719 | 4.09 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -29 | Cycle | Base Substitution | 38805 | 61.26 | 27.00 | 26.66 | 0.34 | After |
| REGRESSION.HCC1395_tumor.L004 | -29 | Cycle | Base Insertion | 38800 | 2.47 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -29 | Cycle | Base Deletion | 38800 | 4.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -3 | Cycle | Base Substitution | 39118 | 134.12 | 25.00 | 26.19 | -1.19 | After |
| REGRESSION.HCC1395_tumor.L004 | -30 | Cycle | Base Substitution | 38844 | 58.07 | 28.00 | 26.95 | 1.05 | After |
| REGRESSION.HCC1395_tumor.L004 | -30 | Cycle | Base Insertion | 38838 | 1.64 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -30 | Cycle | Base Deletion | 38838 | 5.72 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -31 | Cycle | Base Substitution | 38715 | 65.59 | 27.00 | 26.74 | 0.26 | After |
| REGRESSION.HCC1395_tumor.L004 | -31 | Cycle | Base Insertion | 38710 | 2.42 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -31 | Cycle | Base Deletion | 38710 | 5.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -32 | Cycle | Base Substitution | 38826 | 44.53 | 29.00 | 27.39 | 1.61 | After |
| REGRESSION.HCC1395_tumor.L004 | -32 | Cycle | Base Insertion | 38822 | 2.29 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -32 | Cycle | Base Deletion | 38822 | 5.61 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -33 | Cycle | Base Substitution | 38666 | 46.89 | 28.00 | 26.87 | 1.13 | After |
| REGRESSION.HCC1395_tumor.L004 | -33 | Cycle | Base Insertion | 38663 | 2.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -33 | Cycle | Base Deletion | 38663 | 4.99 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -34 | Cycle | Base Substitution | 38666 | 41.53 | 29.00 | 27.07 | 1.93 | After |
| REGRESSION.HCC1395_tumor.L004 | -34 | Cycle | Base Insertion | 38664 | 1.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -34 | Cycle | Base Deletion | 38664 | 4.95 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -35 | Cycle | Base Substitution | 38727 | 61.62 | 28.00 | 27.20 | 0.80 | After |
| REGRESSION.HCC1395_tumor.L004 | -35 | Cycle | Base Insertion | 38723 | 1.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -35 | Cycle | Base Deletion | 38723 | 4.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -36 | Cycle | Base Substitution | 38751 | 57.18 | 28.00 | 26.80 | 1.20 | After |
| REGRESSION.HCC1395_tumor.L004 | -36 | Cycle | Base Insertion | 38745 | 1.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -36 | Cycle | Base Deletion | 38745 | 3.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -37 | Cycle | Base Substitution | 38587 | 61.26 | 27.00 | 26.82 | 0.18 | After |
| REGRESSION.HCC1395_tumor.L004 | -37 | Cycle | Base Insertion | 38581 | 2.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -37 | Cycle | Base Deletion | 38581 | 4.31 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -38 | Cycle | Base Substitution | 38624 | 58.84 | 28.00 | 27.18 | 0.82 | After |
| REGRESSION.HCC1395_tumor.L004 | -38 | Cycle | Base Insertion | 38618 | 1.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -38 | Cycle | Base Deletion | 38618 | 4.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -39 | Cycle | Base Substitution | 38650 | 67.44 | 27.00 | 26.64 | 0.36 | After |
| REGRESSION.HCC1395_tumor.L004 | -39 | Cycle | Base Insertion | 38645 | 1.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -39 | Cycle | Base Deletion | 38645 | 4.10 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -4 | Cycle | Base Substitution | 39012 | 89.32 | 26.00 | 26.15 | -0.15 | After |
| REGRESSION.HCC1395_tumor.L004 | -40 | Cycle | Base Substitution | 38603 | 58.30 | 28.00 | 26.97 | 1.03 | After |
| REGRESSION.HCC1395_tumor.L004 | -40 | Cycle | Base Insertion | 38597 | 3.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -40 | Cycle | Base Deletion | 38597 | 4.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -41 | Cycle | Base Substitution | 38537 | 67.55 | 27.00 | 26.75 | 0.25 | After |
| REGRESSION.HCC1395_tumor.L004 | -41 | Cycle | Base Insertion | 38532 | 3.86 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -41 | Cycle | Base Deletion | 38532 | 4.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -42 | Cycle | Base Substitution | 38482 | 68.18 | 27.00 | 26.83 | 0.17 | After |
| REGRESSION.HCC1395_tumor.L004 | -42 | Cycle | Base Insertion | 38479 | 3.36 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -42 | Cycle | Base Deletion | 38479 | 4.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -43 | Cycle | Base Substitution | 38507 | 43.97 | 29.00 | 27.37 | 1.63 | After |
| REGRESSION.HCC1395_tumor.L004 | -43 | Cycle | Base Insertion | 38500 | 1.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -43 | Cycle | Base Deletion | 38500 | 4.85 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -44 | Cycle | Base Substitution | 38531 | 50.61 | 28.00 | 26.98 | 1.02 | After |
| REGRESSION.HCC1395_tumor.L004 | -44 | Cycle | Base Insertion | 38525 | 2.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -44 | Cycle | Base Deletion | 38525 | 4.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -45 | Cycle | Base Substitution | 38564 | 44.25 | 28.00 | 26.92 | 1.08 | After |
| REGRESSION.HCC1395_tumor.L004 | -45 | Cycle | Base Insertion | 38559 | 1.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -45 | Cycle | Base Deletion | 38559 | 3.30 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -46 | Cycle | Base Substitution | 38514 | 47.50 | 28.00 | 26.79 | 1.21 | After |
| REGRESSION.HCC1395_tumor.L004 | -46 | Cycle | Base Insertion | 38511 | 2.48 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -46 | Cycle | Base Deletion | 38511 | 3.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -47 | Cycle | Base Substitution | 38491 | 61.70 | 27.00 | 26.76 | 0.24 | After |
| REGRESSION.HCC1395_tumor.L004 | -47 | Cycle | Base Insertion | 38482 | 2.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -47 | Cycle | Base Deletion | 38482 | 3.99 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -48 | Cycle | Base Substitution | 38532 | 58.72 | 28.00 | 26.84 | 1.16 | After |
| REGRESSION.HCC1395_tumor.L004 | -48 | Cycle | Base Insertion | 38522 | 1.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -48 | Cycle | Base Deletion | 38522 | 4.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -49 | Cycle | Base Substitution | 38567 | 54.83 | 28.00 | 26.85 | 1.15 | After |
| REGRESSION.HCC1395_tumor.L004 | -49 | Cycle | Base Insertion | 38556 | 1.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -49 | Cycle | Base Deletion | 38556 | 4.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -5 | Cycle | Base Substitution | 39100 | 56.81 | 28.00 | 27.13 | 0.87 | After |
| REGRESSION.HCC1395_tumor.L004 | -5 | Cycle | Base Insertion | 39100 | 0.82 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -5 | Cycle | Base Deletion | 39100 | 0.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -50 | Cycle | Base Substitution | 38511 | 52.56 | 28.00 | 27.00 | 1.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -50 | Cycle | Base Insertion | 38495 | 2.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -50 | Cycle | Base Deletion | 38495 | 4.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -51 | Cycle | Base Substitution | 38393 | 60.98 | 28.00 | 27.03 | 0.97 | After |
| REGRESSION.HCC1395_tumor.L004 | -51 | Cycle | Base Insertion | 38382 | 2.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -51 | Cycle | Base Deletion | 38382 | 4.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -52 | Cycle | Base Substitution | 38350 | 53.63 | 28.00 | 26.89 | 1.11 | After |
| REGRESSION.HCC1395_tumor.L004 | -52 | Cycle | Base Insertion | 38337 | 1.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -52 | Cycle | Base Deletion | 38337 | 4.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -53 | Cycle | Base Substitution | 38510 | 47.40 | 28.00 | 27.25 | 0.75 | After |
| REGRESSION.HCC1395_tumor.L004 | -53 | Cycle | Base Insertion | 38492 | 1.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -53 | Cycle | Base Deletion | 38492 | 4.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -54 | Cycle | Base Substitution | 38425 | 66.40 | 27.00 | 26.92 | 0.08 | After |
| REGRESSION.HCC1395_tumor.L004 | -54 | Cycle | Base Insertion | 38400 | 1.42 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -54 | Cycle | Base Deletion | 38400 | 4.29 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -55 | Cycle | Base Substitution | 38332 | 68.85 | 27.00 | 26.86 | 0.14 | After |
| REGRESSION.HCC1395_tumor.L004 | -55 | Cycle | Base Insertion | 38296 | 1.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -55 | Cycle | Base Deletion | 38296 | 4.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -56 | Cycle | Base Substitution | 38474 | 64.43 | 28.00 | 27.25 | 0.75 | After |
| REGRESSION.HCC1395_tumor.L004 | -56 | Cycle | Base Insertion | 38421 | 2.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -56 | Cycle | Base Deletion | 38421 | 4.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -57 | Cycle | Base Substitution | 38371 | 59.44 | 28.00 | 27.06 | 0.94 | After |
| REGRESSION.HCC1395_tumor.L004 | -57 | Cycle | Base Insertion | 38309 | 1.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -57 | Cycle | Base Deletion | 38309 | 3.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -58 | Cycle | Base Substitution | 38459 | 60.09 | 27.00 | 26.90 | 0.10 | After |
| REGRESSION.HCC1395_tumor.L004 | -58 | Cycle | Base Insertion | 38393 | 2.88 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -58 | Cycle | Base Deletion | 38393 | 3.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -59 | Cycle | Base Substitution | 38418 | 70.40 | 27.00 | 27.01 | -0.01 | After |
| REGRESSION.HCC1395_tumor.L004 | -59 | Cycle | Base Insertion | 38354 | 1.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -59 | Cycle | Base Deletion | 38354 | 3.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -6 | Cycle | Base Substitution | 38944 | 71.18 | 27.00 | 26.97 | 0.03 | After |
| REGRESSION.HCC1395_tumor.L004 | -6 | Cycle | Base Insertion | 38944 | 0.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -6 | Cycle | Base Deletion | 38944 | 1.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -60 | Cycle | Base Substitution | 38383 | 50.88 | 28.00 | 27.05 | 0.95 | After |
| REGRESSION.HCC1395_tumor.L004 | -60 | Cycle | Base Insertion | 38319 | 1.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -60 | Cycle | Base Deletion | 38319 | 3.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -61 | Cycle | Base Substitution | 38302 | 58.46 | 28.00 | 27.04 | 0.96 | After |
| REGRESSION.HCC1395_tumor.L004 | -61 | Cycle | Base Insertion | 38235 | 2.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -61 | Cycle | Base Deletion | 38235 | 4.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -62 | Cycle | Base Substitution | 38400 | 80.23 | 27.00 | 26.40 | 0.60 | After |
| REGRESSION.HCC1395_tumor.L004 | -62 | Cycle | Base Insertion | 38335 | 1.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -62 | Cycle | Base Deletion | 38335 | 4.21 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -63 | Cycle | Base Substitution | 38338 | 69.10 | 27.00 | 26.94 | 0.06 | After |
| REGRESSION.HCC1395_tumor.L004 | -63 | Cycle | Base Insertion | 38267 | 1.09 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -63 | Cycle | Base Deletion | 38267 | 5.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -64 | Cycle | Base Substitution | 38360 | 50.12 | 28.00 | 27.34 | 0.66 | After |
| REGRESSION.HCC1395_tumor.L004 | -64 | Cycle | Base Insertion | 38288 | 0.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -64 | Cycle | Base Deletion | 38288 | 4.86 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -65 | Cycle | Base Substitution | 38417 | 62.38 | 27.00 | 26.86 | 0.14 | After |
| REGRESSION.HCC1395_tumor.L004 | -65 | Cycle | Base Insertion | 38340 | 0.85 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -65 | Cycle | Base Deletion | 38340 | 5.09 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -66 | Cycle | Base Substitution | 38348 | 64.93 | 27.00 | 26.89 | 0.11 | After |
| REGRESSION.HCC1395_tumor.L004 | -66 | Cycle | Base Insertion | 38270 | 1.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -66 | Cycle | Base Deletion | 38270 | 4.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -67 | Cycle | Base Substitution | 38318 | 63.81 | 28.00 | 27.03 | 0.97 | After |
| REGRESSION.HCC1395_tumor.L004 | -67 | Cycle | Base Insertion | 38210 | 1.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -67 | Cycle | Base Deletion | 38210 | 4.21 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -68 | Cycle | Base Substitution | 38279 | 73.37 | 27.00 | 27.03 | -0.03 | After |
| REGRESSION.HCC1395_tumor.L004 | -68 | Cycle | Base Insertion | 38160 | 1.72 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -68 | Cycle | Base Deletion | 38160 | 3.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -69 | Cycle | Base Substitution | 38226 | 69.07 | 27.00 | 26.99 | 0.01 | After |
| REGRESSION.HCC1395_tumor.L004 | -69 | Cycle | Base Insertion | 38112 | 3.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -69 | Cycle | Base Deletion | 38112 | 3.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -7 | Cycle | Base Substitution | 38770 | 71.26 | 27.00 | 26.96 | 0.04 | After |
| REGRESSION.HCC1395_tumor.L004 | -7 | Cycle | Base Insertion | 38770 | 0.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -7 | Cycle | Base Deletion | 38770 | 1.95 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -70 | Cycle | Base Substitution | 38187 | 78.09 | 27.00 | 26.78 | 0.22 | After |
| REGRESSION.HCC1395_tumor.L004 | -70 | Cycle | Base Insertion | 38071 | 1.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -70 | Cycle | Base Deletion | 38071 | 3.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -71 | Cycle | Base Substitution | 38179 | 76.28 | 27.00 | 26.91 | 0.09 | After |
| REGRESSION.HCC1395_tumor.L004 | -71 | Cycle | Base Insertion | 38066 | 0.81 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -71 | Cycle | Base Deletion | 38066 | 3.88 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -72 | Cycle | Base Substitution | 38097 | 67.41 | 27.00 | 26.99 | 0.01 | After |
| REGRESSION.HCC1395_tumor.L004 | -72 | Cycle | Base Insertion | 37970 | 1.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -72 | Cycle | Base Deletion | 37970 | 4.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -73 | Cycle | Base Substitution | 38106 | 66.36 | 27.00 | 26.91 | 0.09 | After |
| REGRESSION.HCC1395_tumor.L004 | -73 | Cycle | Base Insertion | 37958 | 0.96 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -73 | Cycle | Base Deletion | 37958 | 4.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -74 | Cycle | Base Substitution | 37971 | 65.10 | 27.00 | 26.85 | 0.15 | After |
| REGRESSION.HCC1395_tumor.L004 | -74 | Cycle | Base Insertion | 37801 | 1.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -74 | Cycle | Base Deletion | 37801 | 4.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -75 | Cycle | Base Substitution | 38133 | 62.25 | 27.00 | 26.95 | 0.05 | After |
| REGRESSION.HCC1395_tumor.L004 | -75 | Cycle | Base Insertion | 37959 | 1.86 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -75 | Cycle | Base Deletion | 37959 | 5.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -76 | Cycle | Base Substitution | 38091 | 54.61 | 28.00 | 26.96 | 1.04 | After |
| REGRESSION.HCC1395_tumor.L004 | -76 | Cycle | Base Insertion | 37929 | 1.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -76 | Cycle | Base Deletion | 37929 | 3.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -77 | Cycle | Base Substitution | 37801 | 64.98 | 27.00 | 26.90 | 0.10 | After |
| REGRESSION.HCC1395_tumor.L004 | -77 | Cycle | Base Insertion | 37644 | 2.09 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -77 | Cycle | Base Deletion | 37644 | 3.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -78 | Cycle | Base Substitution | 37778 | 61.64 | 28.00 | 27.25 | 0.75 | After |
| REGRESSION.HCC1395_tumor.L004 | -78 | Cycle | Base Insertion | 37609 | 1.17 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -78 | Cycle | Base Deletion | 37609 | 4.07 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -79 | Cycle | Base Substitution | 37855 | 76.33 | 27.00 | 26.72 | 0.28 | After |
| REGRESSION.HCC1395_tumor.L004 | -79 | Cycle | Base Insertion | 37673 | 2.09 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -79 | Cycle | Base Deletion | 37673 | 3.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -8 | Cycle | Base Substitution | 38896 | 67.79 | 28.00 | 27.17 | 0.83 | After |
| REGRESSION.HCC1395_tumor.L004 | -8 | Cycle | Base Insertion | 38896 | 1.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -8 | Cycle | Base Deletion | 38896 | 1.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -80 | Cycle | Base Substitution | 37720 | 67.97 | 27.00 | 27.07 | -0.07 | After |
| REGRESSION.HCC1395_tumor.L004 | -80 | Cycle | Base Insertion | 37543 | 1.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -80 | Cycle | Base Deletion | 37543 | 3.57 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -81 | Cycle | Base Substitution | 37790 | 68.55 | 27.00 | 26.80 | 0.20 | After |
| REGRESSION.HCC1395_tumor.L004 | -81 | Cycle | Base Insertion | 37594 | 0.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -81 | Cycle | Base Deletion | 37594 | 3.17 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -82 | Cycle | Base Substitution | 37565 | 75.74 | 27.00 | 26.48 | 0.52 | After |
| REGRESSION.HCC1395_tumor.L004 | -82 | Cycle | Base Insertion | 37355 | 0.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -82 | Cycle | Base Deletion | 37355 | 3.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -83 | Cycle | Base Substitution | 37622 | 63.62 | 27.00 | 26.77 | 0.23 | After |
| REGRESSION.HCC1395_tumor.L004 | -83 | Cycle | Base Insertion | 37425 | 1.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -83 | Cycle | Base Deletion | 37425 | 4.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -84 | Cycle | Base Substitution | 37584 | 78.22 | 27.00 | 26.88 | 0.12 | After |
| REGRESSION.HCC1395_tumor.L004 | -84 | Cycle | Base Insertion | 37367 | 1.29 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -84 | Cycle | Base Deletion | 37367 | 3.84 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -85 | Cycle | Base Substitution | 37593 | 79.87 | 27.00 | 26.84 | 0.16 | After |
| REGRESSION.HCC1395_tumor.L004 | -85 | Cycle | Base Insertion | 37362 | 0.82 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -85 | Cycle | Base Deletion | 37362 | 3.72 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -86 | Cycle | Base Substitution | 37534 | 74.54 | 27.00 | 26.40 | 0.60 | After |
| REGRESSION.HCC1395_tumor.L004 | -86 | Cycle | Base Insertion | 37299 | 2.37 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -86 | Cycle | Base Deletion | 37299 | 4.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -87 | Cycle | Base Substitution | 37396 | 57.71 | 27.00 | 26.73 | 0.27 | After |
| REGRESSION.HCC1395_tumor.L004 | -87 | Cycle | Base Insertion | 37147 | 1.56 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -87 | Cycle | Base Deletion | 37147 | 3.98 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -88 | Cycle | Base Substitution | 37397 | 78.84 | 27.00 | 26.64 | 0.36 | After |
| REGRESSION.HCC1395_tumor.L004 | -88 | Cycle | Base Insertion | 37145 | 1.73 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -88 | Cycle | Base Deletion | 37145 | 3.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -89 | Cycle | Base Substitution | 37357 | 77.39 | 27.00 | 26.81 | 0.19 | After |
| REGRESSION.HCC1395_tumor.L004 | -89 | Cycle | Base Insertion | 37105 | 1.26 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -89 | Cycle | Base Deletion | 37105 | 4.44 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -9 | Cycle | Base Substitution | 39001 | 55.52 | 28.00 | 27.52 | 0.48 | After |
| REGRESSION.HCC1395_tumor.L004 | -9 | Cycle | Base Insertion | 39001 | 1.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -9 | Cycle | Base Deletion | 39001 | 2.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -90 | Cycle | Base Substitution | 37248 | 69.40 | 27.00 | 27.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -90 | Cycle | Base Insertion | 36989 | 1.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -90 | Cycle | Base Deletion | 36989 | 4.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -91 | Cycle | Base Substitution | 37167 | 67.09 | 27.00 | 26.75 | 0.25 | After |
| REGRESSION.HCC1395_tumor.L004 | -91 | Cycle | Base Insertion | 36925 | 1.09 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -91 | Cycle | Base Deletion | 36925 | 4.07 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -92 | Cycle | Base Substitution | 37014 | 84.68 | 26.00 | 26.89 | -0.89 | After |
| REGRESSION.HCC1395_tumor.L004 | -92 | Cycle | Base Insertion | 36784 | 0.94 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -92 | Cycle | Base Deletion | 36784 | 4.21 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -93 | Cycle | Base Substitution | 37064 | 72.75 | 27.00 | 26.66 | 0.34 | After |
| REGRESSION.HCC1395_tumor.L004 | -93 | Cycle | Base Insertion | 36823 | 1.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -93 | Cycle | Base Deletion | 36823 | 3.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -94 | Cycle | Base Substitution | 37021 | 87.12 | 26.00 | 26.03 | -0.03 | After |
| REGRESSION.HCC1395_tumor.L004 | -94 | Cycle | Base Insertion | 36781 | 1.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -94 | Cycle | Base Deletion | 36781 | 3.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -95 | Cycle | Base Substitution | 36970 | 84.08 | 26.00 | 26.51 | -0.51 | After |
| REGRESSION.HCC1395_tumor.L004 | -95 | Cycle | Base Insertion | 36692 | 1.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -95 | Cycle | Base Deletion | 36692 | 3.42 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -96 | Cycle | Base Substitution | 36898 | 82.29 | 26.00 | 26.60 | -0.60 | After |
| REGRESSION.HCC1395_tumor.L004 | -96 | Cycle | Base Insertion | 36608 | 1.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -96 | Cycle | Base Deletion | 36608 | 2.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -97 | Cycle | Base Substitution | 36738 | 88.29 | 26.00 | 26.54 | -0.54 | After |
| REGRESSION.HCC1395_tumor.L004 | -97 | Cycle | Base Insertion | 36453 | 1.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -97 | Cycle | Base Deletion | 36453 | 2.98 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -98 | Cycle | Base Substitution | 36624 | 87.50 | 26.00 | 26.58 | -0.58 | After |
| REGRESSION.HCC1395_tumor.L004 | -98 | Cycle | Base Insertion | 36328 | 2.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -98 | Cycle | Base Deletion | 36328 | 2.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -99 | Cycle | Base Substitution | 36689 | 77.38 | 27.00 | 26.43 | 0.57 | After |
| REGRESSION.HCC1395_tumor.L004 | -99 | Cycle | Base Insertion | 36410 | 1.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | -99 | Cycle | Base Deletion | 36410 | 3.36 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 1 | Cycle | Base Substitution | 38614 | 69.64 | 27.00 | 26.16 | 0.84 | After |
| REGRESSION.HCC1395_tumor.L004 | 10 | Cycle | Base Substitution | 39001 | 48.12 | 28.00 | 27.64 | 0.36 | After |
| REGRESSION.HCC1395_tumor.L004 | 10 | Cycle | Base Insertion | 39001 | 3.61 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 10 | Cycle | Base Deletion | 39001 | 2.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 100 | Cycle | Base Substitution | 36660 | 65.27 | 27.00 | 27.04 | -0.04 | After |
| REGRESSION.HCC1395_tumor.L004 | 100 | Cycle | Base Insertion | 36378 | 1.36 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 100 | Cycle | Base Deletion | 36378 | 3.73 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 101 | Cycle | Base Substitution | 36530 | 67.43 | 27.00 | 26.89 | 0.11 | After |
| REGRESSION.HCC1395_tumor.L004 | 101 | Cycle | Base Insertion | 36224 | 2.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 101 | Cycle | Base Deletion | 36224 | 3.79 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 102 | Cycle | Base Substitution | 36325 | 54.62 | 28.00 | 27.26 | 0.74 | After |
| REGRESSION.HCC1395_tumor.L004 | 102 | Cycle | Base Insertion | 35998 | 1.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 102 | Cycle | Base Deletion | 35998 | 3.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 103 | Cycle | Base Substitution | 36327 | 51.16 | 28.00 | 27.24 | 0.76 | After |
| REGRESSION.HCC1395_tumor.L004 | 103 | Cycle | Base Insertion | 35994 | 3.09 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 103 | Cycle | Base Deletion | 35994 | 3.51 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 104 | Cycle | Base Substitution | 36374 | 64.24 | 27.00 | 26.94 | 0.06 | After |
| REGRESSION.HCC1395_tumor.L004 | 104 | Cycle | Base Insertion | 36044 | 3.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 104 | Cycle | Base Deletion | 36044 | 3.44 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 105 | Cycle | Base Substitution | 36148 | 64.12 | 27.00 | 26.94 | 0.06 | After |
| REGRESSION.HCC1395_tumor.L004 | 105 | Cycle | Base Insertion | 35832 | 3.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 105 | Cycle | Base Deletion | 35832 | 3.98 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 106 | Cycle | Base Substitution | 36079 | 77.03 | 27.00 | 26.86 | 0.14 | After |
| REGRESSION.HCC1395_tumor.L004 | 106 | Cycle | Base Insertion | 35771 | 1.07 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 106 | Cycle | Base Deletion | 35771 | 3.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 107 | Cycle | Base Substitution | 36041 | 74.15 | 27.00 | 26.95 | 0.05 | After |
| REGRESSION.HCC1395_tumor.L004 | 107 | Cycle | Base Insertion | 35715 | 0.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 107 | Cycle | Base Deletion | 35715 | 3.42 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 108 | Cycle | Base Substitution | 35845 | 90.32 | 26.00 | 26.21 | -0.21 | After |
| REGRESSION.HCC1395_tumor.L004 | 108 | Cycle | Base Insertion | 35518 | 0.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 108 | Cycle | Base Deletion | 35518 | 3.09 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 109 | Cycle | Base Substitution | 35889 | 65.84 | 27.00 | 26.76 | 0.24 | After |
| REGRESSION.HCC1395_tumor.L004 | 109 | Cycle | Base Insertion | 35563 | 0.86 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 109 | Cycle | Base Deletion | 35563 | 2.88 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 11 | Cycle | Base Substitution | 39044 | 37.54 | 29.00 | 27.78 | 1.22 | After |
| REGRESSION.HCC1395_tumor.L004 | 11 | Cycle | Base Insertion | 39044 | 1.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 11 | Cycle | Base Deletion | 39044 | 2.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 110 | Cycle | Base Substitution | 35768 | 71.30 | 27.00 | 26.86 | 0.14 | After |
| REGRESSION.HCC1395_tumor.L004 | 110 | Cycle | Base Insertion | 35416 | 1.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 110 | Cycle | Base Deletion | 35416 | 3.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 111 | Cycle | Base Substitution | 35620 | 65.27 | 27.00 | 26.73 | 0.27 | After |
| REGRESSION.HCC1395_tumor.L004 | 111 | Cycle | Base Insertion | 35282 | 0.85 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 111 | Cycle | Base Deletion | 35282 | 3.37 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 112 | Cycle | Base Substitution | 35528 | 55.89 | 28.00 | 27.02 | 0.98 | After |
| REGRESSION.HCC1395_tumor.L004 | 112 | Cycle | Base Insertion | 35195 | 1.07 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 112 | Cycle | Base Deletion | 35195 | 3.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 113 | Cycle | Base Substitution | 35523 | 54.99 | 28.00 | 27.00 | 1.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 113 | Cycle | Base Insertion | 35161 | 2.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 113 | Cycle | Base Deletion | 35161 | 3.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 114 | Cycle | Base Substitution | 35485 | 57.95 | 27.00 | 26.71 | 0.29 | After |
| REGRESSION.HCC1395_tumor.L004 | 114 | Cycle | Base Insertion | 35143 | 1.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 114 | Cycle | Base Deletion | 35143 | 3.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 115 | Cycle | Base Substitution | 35337 | 72.28 | 27.00 | 26.79 | 0.21 | After |
| REGRESSION.HCC1395_tumor.L004 | 115 | Cycle | Base Insertion | 34997 | 0.77 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 115 | Cycle | Base Deletion | 34997 | 3.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 116 | Cycle | Base Substitution | 35282 | 72.35 | 27.00 | 26.79 | 0.21 | After |
| REGRESSION.HCC1395_tumor.L004 | 116 | Cycle | Base Insertion | 34951 | 0.73 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 116 | Cycle | Base Deletion | 34951 | 3.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 117 | Cycle | Base Substitution | 35154 | 75.05 | 27.00 | 26.53 | 0.47 | After |
| REGRESSION.HCC1395_tumor.L004 | 117 | Cycle | Base Insertion | 34821 | 1.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 117 | Cycle | Base Deletion | 34821 | 3.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 118 | Cycle | Base Substitution | 35084 | 59.17 | 27.00 | 26.94 | 0.06 | After |
| REGRESSION.HCC1395_tumor.L004 | 118 | Cycle | Base Insertion | 34760 | 0.79 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 118 | Cycle | Base Deletion | 34760 | 3.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 119 | Cycle | Base Substitution | 34991 | 89.06 | 26.00 | 26.72 | -0.72 | After |
| REGRESSION.HCC1395_tumor.L004 | 119 | Cycle | Base Insertion | 34673 | 1.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 119 | Cycle | Base Deletion | 34673 | 4.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 12 | Cycle | Base Substitution | 38863 | 37.39 | 29.00 | 28.22 | 0.78 | After |
| REGRESSION.HCC1395_tumor.L004 | 12 | Cycle | Base Insertion | 38863 | 2.30 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 12 | Cycle | Base Deletion | 38863 | 2.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 120 | Cycle | Base Substitution | 34977 | 60.28 | 27.00 | 26.96 | 0.04 | After |
| REGRESSION.HCC1395_tumor.L004 | 120 | Cycle | Base Insertion | 34633 | 0.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 120 | Cycle | Base Deletion | 34633 | 2.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 121 | Cycle | Base Substitution | 34748 | 62.73 | 27.00 | 26.65 | 0.35 | After |
| REGRESSION.HCC1395_tumor.L004 | 121 | Cycle | Base Insertion | 34390 | 1.02 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 121 | Cycle | Base Deletion | 34390 | 3.02 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 122 | Cycle | Base Substitution | 34631 | 79.24 | 26.00 | 26.10 | -0.10 | After |
| REGRESSION.HCC1395_tumor.L004 | 122 | Cycle | Base Insertion | 34247 | 2.42 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 122 | Cycle | Base Deletion | 34247 | 3.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 123 | Cycle | Base Substitution | 34630 | 84.35 | 26.00 | 26.80 | -0.80 | After |
| REGRESSION.HCC1395_tumor.L004 | 123 | Cycle | Base Insertion | 34228 | 2.86 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 123 | Cycle | Base Deletion | 34228 | 3.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 124 | Cycle | Base Substitution | 34672 | 68.82 | 27.00 | 26.43 | 0.57 | After |
| REGRESSION.HCC1395_tumor.L004 | 124 | Cycle | Base Insertion | 34250 | 1.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 124 | Cycle | Base Deletion | 34250 | 3.94 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 125 | Cycle | Base Substitution | 34553 | 75.23 | 27.00 | 26.64 | 0.36 | After |
| REGRESSION.HCC1395_tumor.L004 | 125 | Cycle | Base Insertion | 34133 | 1.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 125 | Cycle | Base Deletion | 34133 | 4.48 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 126 | Cycle | Base Substitution | 34457 | 77.28 | 26.00 | 26.09 | -0.09 | After |
| REGRESSION.HCC1395_tumor.L004 | 126 | Cycle | Base Insertion | 34045 | 1.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 126 | Cycle | Base Deletion | 34045 | 3.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 127 | Cycle | Base Substitution | 34374 | 69.10 | 27.00 | 26.64 | 0.36 | After |
| REGRESSION.HCC1395_tumor.L004 | 127 | Cycle | Base Insertion | 33976 | 3.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 127 | Cycle | Base Deletion | 33976 | 3.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 128 | Cycle | Base Substitution | 34241 | 58.53 | 27.00 | 26.69 | 0.31 | After |
| REGRESSION.HCC1395_tumor.L004 | 128 | Cycle | Base Insertion | 33833 | 0.84 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 128 | Cycle | Base Deletion | 33833 | 3.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 129 | Cycle | Base Substitution | 34102 | 70.14 | 27.00 | 26.41 | 0.59 | After |
| REGRESSION.HCC1395_tumor.L004 | 129 | Cycle | Base Insertion | 33706 | 0.84 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 129 | Cycle | Base Deletion | 33706 | 3.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 13 | Cycle | Base Substitution | 38889 | 55.06 | 28.00 | 27.65 | 0.35 | After |
| REGRESSION.HCC1395_tumor.L004 | 13 | Cycle | Base Insertion | 38889 | 1.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 13 | Cycle | Base Deletion | 38889 | 3.56 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 130 | Cycle | Base Substitution | 34049 | 68.36 | 27.00 | 26.55 | 0.45 | After |
| REGRESSION.HCC1395_tumor.L004 | 130 | Cycle | Base Insertion | 33644 | 1.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 130 | Cycle | Base Deletion | 33644 | 3.56 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 131 | Cycle | Base Substitution | 33797 | 67.14 | 27.00 | 26.65 | 0.35 | After |
| REGRESSION.HCC1395_tumor.L004 | 131 | Cycle | Base Insertion | 33389 | 0.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 131 | Cycle | Base Deletion | 33389 | 3.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 132 | Cycle | Base Substitution | 33698 | 54.89 | 27.00 | 26.80 | 0.20 | After |
| REGRESSION.HCC1395_tumor.L004 | 132 | Cycle | Base Insertion | 33285 | 1.17 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 132 | Cycle | Base Deletion | 33285 | 3.61 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 133 | Cycle | Base Substitution | 33638 | 65.54 | 27.00 | 26.72 | 0.28 | After |
| REGRESSION.HCC1395_tumor.L004 | 133 | Cycle | Base Insertion | 33228 | 1.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 133 | Cycle | Base Deletion | 33228 | 4.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 134 | Cycle | Base Substitution | 33633 | 67.52 | 27.00 | 26.69 | 0.31 | After |
| REGRESSION.HCC1395_tumor.L004 | 134 | Cycle | Base Insertion | 33207 | 1.42 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 134 | Cycle | Base Deletion | 33207 | 3.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 135 | Cycle | Base Substitution | 33479 | 76.61 | 26.00 | 26.62 | -0.62 | After |
| REGRESSION.HCC1395_tumor.L004 | 135 | Cycle | Base Insertion | 33063 | 1.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 135 | Cycle | Base Deletion | 33063 | 3.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 136 | Cycle | Base Substitution | 33449 | 60.12 | 27.00 | 26.71 | 0.29 | After |
| REGRESSION.HCC1395_tumor.L004 | 136 | Cycle | Base Insertion | 33026 | 1.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 136 | Cycle | Base Deletion | 33026 | 2.61 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 137 | Cycle | Base Substitution | 33417 | 60.01 | 27.00 | 26.90 | 0.10 | After |
| REGRESSION.HCC1395_tumor.L004 | 137 | Cycle | Base Insertion | 33001 | 2.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 137 | Cycle | Base Deletion | 33001 | 2.85 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 138 | Cycle | Base Substitution | 33208 | 66.42 | 27.00 | 26.82 | 0.18 | After |
| REGRESSION.HCC1395_tumor.L004 | 138 | Cycle | Base Insertion | 32803 | 1.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 138 | Cycle | Base Deletion | 32803 | 3.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 139 | Cycle | Base Substitution | 33180 | 76.90 | 26.00 | 26.52 | -0.52 | After |
| REGRESSION.HCC1395_tumor.L004 | 139 | Cycle | Base Insertion | 32765 | 1.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 139 | Cycle | Base Deletion | 32765 | 2.61 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 14 | Cycle | Base Substitution | 38940 | 51.81 | 28.00 | 27.93 | 0.07 | After |
| REGRESSION.HCC1395_tumor.L004 | 14 | Cycle | Base Insertion | 38940 | 1.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 14 | Cycle | Base Deletion | 38940 | 3.77 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 140 | Cycle | Base Substitution | 33076 | 74.20 | 26.00 | 26.53 | -0.53 | After |
| REGRESSION.HCC1395_tumor.L004 | 140 | Cycle | Base Insertion | 32662 | 0.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 140 | Cycle | Base Deletion | 32662 | 2.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 141 | Cycle | Base Substitution | 32934 | 73.06 | 26.00 | 26.63 | -0.63 | After |
| REGRESSION.HCC1395_tumor.L004 | 141 | Cycle | Base Insertion | 32509 | 0.47 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 141 | Cycle | Base Deletion | 32509 | 1.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 142 | Cycle | Base Substitution | 32807 | 64.97 | 27.00 | 26.62 | 0.38 | After |
| REGRESSION.HCC1395_tumor.L004 | 142 | Cycle | Base Insertion | 32333 | 0.31 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 142 | Cycle | Base Deletion | 32333 | 2.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 143 | Cycle | Base Substitution | 32713 | 64.45 | 27.00 | 26.63 | 0.37 | After |
| REGRESSION.HCC1395_tumor.L004 | 143 | Cycle | Base Insertion | 32270 | 0.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 143 | Cycle | Base Deletion | 32270 | 1.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 144 | Cycle | Base Substitution | 32658 | 59.75 | 27.00 | 26.71 | 0.29 | After |
| REGRESSION.HCC1395_tumor.L004 | 144 | Cycle | Base Insertion | 32215 | 1.10 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 144 | Cycle | Base Deletion | 32215 | 1.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 145 | Cycle | Base Substitution | 32529 | 56.76 | 27.00 | 26.44 | 0.56 | After |
| REGRESSION.HCC1395_tumor.L004 | 145 | Cycle | Base Insertion | 32092 | 1.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 145 | Cycle | Base Deletion | 32092 | 1.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 146 | Cycle | Base Substitution | 32353 | 73.89 | 26.00 | 26.55 | -0.55 | After |
| REGRESSION.HCC1395_tumor.L004 | 146 | Cycle | Base Insertion | 31952 | 0.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 146 | Cycle | Base Deletion | 31952 | 0.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 147 | Cycle | Base Substitution | 32371 | 69.61 | 27.00 | 26.57 | 0.43 | After |
| REGRESSION.HCC1395_tumor.L004 | 148 | Cycle | Base Substitution | 32120 | 100.59 | 25.00 | 26.44 | -1.44 | After |
| REGRESSION.HCC1395_tumor.L004 | 149 | Cycle | Base Substitution | 32116 | 78.68 | 26.00 | 26.48 | -0.48 | After |
| REGRESSION.HCC1395_tumor.L004 | 15 | Cycle | Base Substitution | 38925 | 42.37 | 29.00 | 27.89 | 1.11 | After |
| REGRESSION.HCC1395_tumor.L004 | 15 | Cycle | Base Insertion | 38925 | 1.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 15 | Cycle | Base Deletion | 38925 | 2.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 150 | Cycle | Base Substitution | 32010 | 85.13 | 26.00 | 26.37 | -0.37 | After |
| REGRESSION.HCC1395_tumor.L004 | 16 | Cycle | Base Substitution | 39030 | 37.00 | 29.00 | 28.90 | 0.10 | After |
| REGRESSION.HCC1395_tumor.L004 | 16 | Cycle | Base Insertion | 39030 | 3.85 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 16 | Cycle | Base Deletion | 39030 | 3.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 17 | Cycle | Base Substitution | 38886 | 25.73 | 30.00 | 28.65 | 1.35 | After |
| REGRESSION.HCC1395_tumor.L004 | 17 | Cycle | Base Insertion | 38886 | 5.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 17 | Cycle | Base Deletion | 38886 | 3.31 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 18 | Cycle | Base Substitution | 38958 | 21.11 | 30.00 | 28.85 | 1.15 | After |
| REGRESSION.HCC1395_tumor.L004 | 18 | Cycle | Base Insertion | 38958 | 3.42 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 18 | Cycle | Base Deletion | 38958 | 3.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 19 | Cycle | Base Substitution | 38924 | 29.84 | 30.00 | 28.68 | 1.32 | After |
| REGRESSION.HCC1395_tumor.L004 | 19 | Cycle | Base Insertion | 38924 | 2.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 19 | Cycle | Base Deletion | 38924 | 3.99 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 2 | Cycle | Base Substitution | 39186 | 86.84 | 27.00 | 27.29 | -0.29 | After |
| REGRESSION.HCC1395_tumor.L004 | 20 | Cycle | Base Substitution | 38909 | 30.54 | 30.00 | 28.78 | 1.22 | After |
| REGRESSION.HCC1395_tumor.L004 | 20 | Cycle | Base Insertion | 38909 | 2.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 20 | Cycle | Base Deletion | 38909 | 4.02 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 21 | Cycle | Base Substitution | 38898 | 38.40 | 29.00 | 28.63 | 0.37 | After |
| REGRESSION.HCC1395_tumor.L004 | 21 | Cycle | Base Insertion | 38898 | 3.55 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 21 | Cycle | Base Deletion | 38898 | 4.46 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 22 | Cycle | Base Substitution | 38919 | 29.47 | 30.00 | 29.00 | 1.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 22 | Cycle | Base Insertion | 38919 | 2.21 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 22 | Cycle | Base Deletion | 38919 | 3.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 23 | Cycle | Base Substitution | 38891 | 33.52 | 30.00 | 28.77 | 1.23 | After |
| REGRESSION.HCC1395_tumor.L004 | 23 | Cycle | Base Insertion | 38891 | 4.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 23 | Cycle | Base Deletion | 38891 | 3.88 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 24 | Cycle | Base Substitution | 38923 | 35.68 | 29.00 | 28.83 | 0.17 | After |
| REGRESSION.HCC1395_tumor.L004 | 24 | Cycle | Base Insertion | 38923 | 2.61 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 24 | Cycle | Base Deletion | 38923 | 3.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 25 | Cycle | Base Substitution | 38796 | 26.90 | 30.00 | 28.83 | 1.17 | After |
| REGRESSION.HCC1395_tumor.L004 | 25 | Cycle | Base Insertion | 38796 | 2.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 25 | Cycle | Base Deletion | 38796 | 3.51 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 26 | Cycle | Base Substitution | 38886 | 38.65 | 29.00 | 27.91 | 1.09 | After |
| REGRESSION.HCC1395_tumor.L004 | 26 | Cycle | Base Insertion | 38885 | 1.85 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 26 | Cycle | Base Deletion | 38885 | 3.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 27 | Cycle | Base Substitution | 38848 | 39.95 | 29.00 | 27.76 | 1.24 | After |
| REGRESSION.HCC1395_tumor.L004 | 27 | Cycle | Base Insertion | 38846 | 2.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 27 | Cycle | Base Deletion | 38846 | 3.37 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 28 | Cycle | Base Substitution | 38792 | 39.01 | 29.00 | 28.01 | 0.99 | After |
| REGRESSION.HCC1395_tumor.L004 | 28 | Cycle | Base Insertion | 38790 | 1.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 28 | Cycle | Base Deletion | 38790 | 3.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 29 | Cycle | Base Substitution | 38810 | 30.53 | 29.00 | 27.89 | 1.11 | After |
| REGRESSION.HCC1395_tumor.L004 | 29 | Cycle | Base Insertion | 38809 | 2.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 29 | Cycle | Base Deletion | 38809 | 3.79 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 3 | Cycle | Base Substitution | 39061 | 103.86 | 26.00 | 27.33 | -1.33 | After |
| REGRESSION.HCC1395_tumor.L004 | 30 | Cycle | Base Substitution | 38677 | 45.48 | 29.00 | 27.86 | 1.14 | After |
| REGRESSION.HCC1395_tumor.L004 | 30 | Cycle | Base Insertion | 38673 | 1.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 30 | Cycle | Base Deletion | 38673 | 5.46 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 31 | Cycle | Base Substitution | 38778 | 41.48 | 29.00 | 28.01 | 0.99 | After |
| REGRESSION.HCC1395_tumor.L004 | 31 | Cycle | Base Insertion | 38774 | 1.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 31 | Cycle | Base Deletion | 38774 | 5.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 32 | Cycle | Base Substitution | 38877 | 56.73 | 28.00 | 27.89 | 0.11 | After |
| REGRESSION.HCC1395_tumor.L004 | 32 | Cycle | Base Insertion | 38872 | 1.72 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 32 | Cycle | Base Deletion | 38872 | 4.82 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 33 | Cycle | Base Substitution | 38680 | 34.80 | 29.00 | 27.82 | 1.18 | After |
| REGRESSION.HCC1395_tumor.L004 | 33 | Cycle | Base Insertion | 38675 | 1.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 33 | Cycle | Base Deletion | 38675 | 5.26 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 34 | Cycle | Base Substitution | 38709 | 37.54 | 29.00 | 27.94 | 1.06 | After |
| REGRESSION.HCC1395_tumor.L004 | 34 | Cycle | Base Insertion | 38707 | 1.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 34 | Cycle | Base Deletion | 38707 | 4.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 35 | Cycle | Base Substitution | 38562 | 36.83 | 29.00 | 27.94 | 1.06 | After |
| REGRESSION.HCC1395_tumor.L004 | 35 | Cycle | Base Insertion | 38559 | 1.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 35 | Cycle | Base Deletion | 38559 | 4.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 36 | Cycle | Base Substitution | 38711 | 50.22 | 29.00 | 28.06 | 0.94 | After |
| REGRESSION.HCC1395_tumor.L004 | 36 | Cycle | Base Insertion | 38709 | 1.21 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 36 | Cycle | Base Deletion | 38709 | 4.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 37 | Cycle | Base Substitution | 38756 | 40.19 | 29.00 | 27.85 | 1.15 | After |
| REGRESSION.HCC1395_tumor.L004 | 37 | Cycle | Base Insertion | 38751 | 1.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 37 | Cycle | Base Deletion | 38751 | 4.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 38 | Cycle | Base Substitution | 38717 | 49.03 | 28.00 | 27.97 | 0.03 | After |
| REGRESSION.HCC1395_tumor.L004 | 38 | Cycle | Base Insertion | 38713 | 1.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 38 | Cycle | Base Deletion | 38713 | 3.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 39 | Cycle | Base Substitution | 38662 | 41.29 | 29.00 | 27.83 | 1.17 | After |
| REGRESSION.HCC1395_tumor.L004 | 39 | Cycle | Base Insertion | 38656 | 2.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 39 | Cycle | Base Deletion | 38656 | 4.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 4 | Cycle | Base Substitution | 38964 | 62.40 | 28.00 | 27.31 | 0.69 | After |
| REGRESSION.HCC1395_tumor.L004 | 40 | Cycle | Base Substitution | 38669 | 43.67 | 29.00 | 27.87 | 1.13 | After |
| REGRESSION.HCC1395_tumor.L004 | 40 | Cycle | Base Insertion | 38662 | 1.38 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 40 | Cycle | Base Deletion | 38662 | 4.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 41 | Cycle | Base Substitution | 38681 | 47.18 | 28.00 | 27.82 | 0.18 | After |
| REGRESSION.HCC1395_tumor.L004 | 41 | Cycle | Base Insertion | 38675 | 2.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 41 | Cycle | Base Deletion | 38675 | 5.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 42 | Cycle | Base Substitution | 38544 | 22.95 | 30.00 | 28.39 | 1.61 | After |
| REGRESSION.HCC1395_tumor.L004 | 42 | Cycle | Base Insertion | 38537 | 4.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 42 | Cycle | Base Deletion | 38537 | 4.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 43 | Cycle | Base Substitution | 38703 | 51.95 | 28.00 | 27.86 | 0.14 | After |
| REGRESSION.HCC1395_tumor.L004 | 43 | Cycle | Base Insertion | 38698 | 2.26 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 43 | Cycle | Base Deletion | 38698 | 4.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 44 | Cycle | Base Substitution | 38632 | 39.92 | 29.00 | 27.89 | 1.11 | After |
| REGRESSION.HCC1395_tumor.L004 | 44 | Cycle | Base Insertion | 38627 | 1.30 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 44 | Cycle | Base Deletion | 38627 | 3.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 45 | Cycle | Base Substitution | 38464 | 54.86 | 28.00 | 27.91 | 0.09 | After |
| REGRESSION.HCC1395_tumor.L004 | 45 | Cycle | Base Insertion | 38456 | 1.09 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 45 | Cycle | Base Deletion | 38456 | 2.95 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 46 | Cycle | Base Substitution | 38678 | 38.93 | 29.00 | 27.88 | 1.12 | After |
| REGRESSION.HCC1395_tumor.L004 | 46 | Cycle | Base Insertion | 38667 | 1.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 46 | Cycle | Base Deletion | 38667 | 4.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 47 | Cycle | Base Substitution | 38533 | 44.20 | 29.00 | 28.39 | 0.61 | After |
| REGRESSION.HCC1395_tumor.L004 | 47 | Cycle | Base Insertion | 38523 | 2.56 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 47 | Cycle | Base Deletion | 38523 | 4.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 48 | Cycle | Base Substitution | 38440 | 44.18 | 29.00 | 28.33 | 0.67 | After |
| REGRESSION.HCC1395_tumor.L004 | 48 | Cycle | Base Insertion | 38427 | 1.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 48 | Cycle | Base Deletion | 38427 | 4.10 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 49 | Cycle | Base Substitution | 38548 | 39.05 | 29.00 | 27.79 | 1.21 | After |
| REGRESSION.HCC1395_tumor.L004 | 49 | Cycle | Base Insertion | 38535 | 3.18 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 49 | Cycle | Base Deletion | 38535 | 4.44 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 5 | Cycle | Base Substitution | 39078 | 46.91 | 28.00 | 27.90 | 0.10 | After |
| REGRESSION.HCC1395_tumor.L004 | 5 | Cycle | Base Insertion | 39078 | 2.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 5 | Cycle | Base Deletion | 39078 | 0.77 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 50 | Cycle | Base Substitution | 38560 | 49.10 | 28.00 | 27.51 | 0.49 | After |
| REGRESSION.HCC1395_tumor.L004 | 50 | Cycle | Base Insertion | 38548 | 1.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 50 | Cycle | Base Deletion | 38548 | 3.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 51 | Cycle | Base Substitution | 38514 | 65.03 | 28.00 | 27.60 | 0.40 | After |
| REGRESSION.HCC1395_tumor.L004 | 51 | Cycle | Base Insertion | 38500 | 1.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 51 | Cycle | Base Deletion | 38500 | 4.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 52 | Cycle | Base Substitution | 38525 | 45.72 | 28.00 | 27.89 | 0.11 | After |
| REGRESSION.HCC1395_tumor.L004 | 52 | Cycle | Base Insertion | 38508 | 1.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 52 | Cycle | Base Deletion | 38508 | 4.77 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 53 | Cycle | Base Substitution | 38510 | 51.62 | 28.00 | 27.69 | 0.31 | After |
| REGRESSION.HCC1395_tumor.L004 | 53 | Cycle | Base Insertion | 38488 | 1.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 53 | Cycle | Base Deletion | 38488 | 5.96 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 54 | Cycle | Base Substitution | 38415 | 47.96 | 28.00 | 27.65 | 0.35 | After |
| REGRESSION.HCC1395_tumor.L004 | 54 | Cycle | Base Insertion | 38393 | 2.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 54 | Cycle | Base Deletion | 38393 | 3.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 55 | Cycle | Base Substitution | 38473 | 54.82 | 28.00 | 27.66 | 0.34 | After |
| REGRESSION.HCC1395_tumor.L004 | 55 | Cycle | Base Insertion | 38437 | 2.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 55 | Cycle | Base Deletion | 38437 | 3.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 56 | Cycle | Base Substitution | 38508 | 41.64 | 29.00 | 27.87 | 1.13 | After |
| REGRESSION.HCC1395_tumor.L004 | 56 | Cycle | Base Insertion | 38457 | 2.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 56 | Cycle | Base Deletion | 38457 | 3.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 57 | Cycle | Base Substitution | 38426 | 62.55 | 28.00 | 27.70 | 0.30 | After |
| REGRESSION.HCC1395_tumor.L004 | 57 | Cycle | Base Insertion | 38376 | 2.51 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 57 | Cycle | Base Deletion | 38376 | 4.44 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 58 | Cycle | Base Substitution | 38359 | 45.40 | 29.00 | 28.08 | 0.92 | After |
| REGRESSION.HCC1395_tumor.L004 | 58 | Cycle | Base Insertion | 38303 | 1.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 58 | Cycle | Base Deletion | 38303 | 4.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 59 | Cycle | Base Substitution | 38409 | 47.02 | 28.00 | 27.90 | 0.10 | After |
| REGRESSION.HCC1395_tumor.L004 | 59 | Cycle | Base Insertion | 38349 | 2.37 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 59 | Cycle | Base Deletion | 38349 | 4.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 6 | Cycle | Base Substitution | 38938 | 42.51 | 29.00 | 27.73 | 1.27 | After |
| REGRESSION.HCC1395_tumor.L004 | 6 | Cycle | Base Insertion | 38938 | 1.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 6 | Cycle | Base Deletion | 38938 | 1.61 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 60 | Cycle | Base Substitution | 38323 | 50.17 | 28.00 | 27.64 | 0.36 | After |
| REGRESSION.HCC1395_tumor.L004 | 60 | Cycle | Base Insertion | 38260 | 1.99 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 60 | Cycle | Base Deletion | 38260 | 4.57 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 61 | Cycle | Base Substitution | 38310 | 42.49 | 29.00 | 27.72 | 1.28 | After |
| REGRESSION.HCC1395_tumor.L004 | 61 | Cycle | Base Insertion | 38246 | 2.72 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 61 | Cycle | Base Deletion | 38246 | 4.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 62 | Cycle | Base Substitution | 38338 | 54.01 | 28.00 | 27.68 | 0.32 | After |
| REGRESSION.HCC1395_tumor.L004 | 62 | Cycle | Base Insertion | 38269 | 2.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 62 | Cycle | Base Deletion | 38269 | 4.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 63 | Cycle | Base Substitution | 38229 | 56.61 | 28.00 | 27.47 | 0.53 | After |
| REGRESSION.HCC1395_tumor.L004 | 63 | Cycle | Base Insertion | 38162 | 1.55 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 63 | Cycle | Base Deletion | 38162 | 3.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 64 | Cycle | Base Substitution | 38253 | 43.36 | 29.00 | 27.66 | 1.34 | After |
| REGRESSION.HCC1395_tumor.L004 | 64 | Cycle | Base Insertion | 38181 | 1.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 64 | Cycle | Base Deletion | 38181 | 2.94 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 65 | Cycle | Base Substitution | 38152 | 62.23 | 28.00 | 27.49 | 0.51 | After |
| REGRESSION.HCC1395_tumor.L004 | 65 | Cycle | Base Insertion | 38074 | 1.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 65 | Cycle | Base Deletion | 38074 | 3.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 66 | Cycle | Base Substitution | 38123 | 48.51 | 28.00 | 27.63 | 0.37 | After |
| REGRESSION.HCC1395_tumor.L004 | 66 | Cycle | Base Insertion | 38029 | 1.84 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 66 | Cycle | Base Deletion | 38029 | 3.64 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 67 | Cycle | Base Substitution | 38276 | 47.85 | 28.00 | 27.40 | 0.60 | After |
| REGRESSION.HCC1395_tumor.L004 | 67 | Cycle | Base Insertion | 38169 | 1.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 67 | Cycle | Base Deletion | 38169 | 3.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 68 | Cycle | Base Substitution | 38313 | 53.94 | 28.00 | 27.99 | 0.01 | After |
| REGRESSION.HCC1395_tumor.L004 | 68 | Cycle | Base Insertion | 38201 | 1.79 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 68 | Cycle | Base Deletion | 38201 | 3.47 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 69 | Cycle | Base Substitution | 38246 | 56.01 | 28.00 | 27.65 | 0.35 | After |
| REGRESSION.HCC1395_tumor.L004 | 69 | Cycle | Base Insertion | 38138 | 2.07 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 69 | Cycle | Base Deletion | 38138 | 3.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 7 | Cycle | Base Substitution | 38975 | 43.70 | 29.00 | 28.03 | 0.97 | After |
| REGRESSION.HCC1395_tumor.L004 | 7 | Cycle | Base Insertion | 38975 | 2.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 7 | Cycle | Base Deletion | 38975 | 1.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 70 | Cycle | Base Substitution | 38183 | 44.92 | 29.00 | 28.05 | 0.95 | After |
| REGRESSION.HCC1395_tumor.L004 | 70 | Cycle | Base Insertion | 38075 | 1.99 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 70 | Cycle | Base Deletion | 38075 | 3.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 71 | Cycle | Base Substitution | 38197 | 33.77 | 29.00 | 27.49 | 1.51 | After |
| REGRESSION.HCC1395_tumor.L004 | 71 | Cycle | Base Insertion | 38085 | 3.77 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 71 | Cycle | Base Deletion | 38085 | 4.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 72 | Cycle | Base Substitution | 37985 | 53.04 | 28.00 | 27.44 | 0.56 | After |
| REGRESSION.HCC1395_tumor.L004 | 72 | Cycle | Base Insertion | 37863 | 3.09 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 72 | Cycle | Base Deletion | 37863 | 3.99 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 73 | Cycle | Base Substitution | 38154 | 68.08 | 27.00 | 27.37 | -0.37 | After |
| REGRESSION.HCC1395_tumor.L004 | 73 | Cycle | Base Insertion | 38015 | 1.79 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 73 | Cycle | Base Deletion | 38015 | 3.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 74 | Cycle | Base Substitution | 37965 | 43.77 | 29.00 | 27.65 | 1.35 | After |
| REGRESSION.HCC1395_tumor.L004 | 74 | Cycle | Base Insertion | 37812 | 2.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 74 | Cycle | Base Deletion | 37812 | 3.79 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 75 | Cycle | Base Substitution | 37929 | 48.57 | 28.00 | 27.56 | 0.44 | After |
| REGRESSION.HCC1395_tumor.L004 | 75 | Cycle | Base Insertion | 37770 | 1.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 75 | Cycle | Base Deletion | 37770 | 4.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 76 | Cycle | Base Substitution | 37980 | 47.72 | 28.00 | 27.27 | 0.73 | After |
| REGRESSION.HCC1395_tumor.L004 | 76 | Cycle | Base Insertion | 37830 | 1.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 76 | Cycle | Base Deletion | 37830 | 4.30 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 77 | Cycle | Base Substitution | 37986 | 58.25 | 28.00 | 27.35 | 0.65 | After |
| REGRESSION.HCC1395_tumor.L004 | 77 | Cycle | Base Insertion | 37840 | 2.09 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 77 | Cycle | Base Deletion | 37840 | 3.85 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 78 | Cycle | Base Substitution | 37822 | 58.02 | 28.00 | 27.45 | 0.55 | After |
| REGRESSION.HCC1395_tumor.L004 | 78 | Cycle | Base Insertion | 37669 | 1.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 78 | Cycle | Base Deletion | 37669 | 4.02 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 79 | Cycle | Base Substitution | 37869 | 53.92 | 28.00 | 27.47 | 0.53 | After |
| REGRESSION.HCC1395_tumor.L004 | 79 | Cycle | Base Insertion | 37692 | 2.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 79 | Cycle | Base Deletion | 37692 | 4.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 8 | Cycle | Base Substitution | 38970 | 33.33 | 30.00 | 28.32 | 1.68 | After |
| REGRESSION.HCC1395_tumor.L004 | 8 | Cycle | Base Insertion | 38970 | 2.38 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 8 | Cycle | Base Deletion | 38970 | 1.55 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 80 | Cycle | Base Substitution | 37714 | 56.93 | 28.00 | 27.19 | 0.81 | After |
| REGRESSION.HCC1395_tumor.L004 | 80 | Cycle | Base Insertion | 37528 | 1.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 80 | Cycle | Base Deletion | 37528 | 3.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 81 | Cycle | Base Substitution | 37675 | 71.48 | 27.00 | 27.30 | -0.30 | After |
| REGRESSION.HCC1395_tumor.L004 | 81 | Cycle | Base Insertion | 37485 | 1.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 81 | Cycle | Base Deletion | 37485 | 2.64 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 82 | Cycle | Base Substitution | 37643 | 51.78 | 28.00 | 27.28 | 0.72 | After |
| REGRESSION.HCC1395_tumor.L004 | 82 | Cycle | Base Insertion | 37444 | 2.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 82 | Cycle | Base Deletion | 37444 | 3.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 83 | Cycle | Base Substitution | 37598 | 62.32 | 28.00 | 27.31 | 0.69 | After |
| REGRESSION.HCC1395_tumor.L004 | 83 | Cycle | Base Insertion | 37407 | 1.55 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 83 | Cycle | Base Deletion | 37407 | 3.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 84 | Cycle | Base Substitution | 37532 | 65.87 | 27.00 | 27.44 | -0.44 | After |
| REGRESSION.HCC1395_tumor.L004 | 84 | Cycle | Base Insertion | 37329 | 2.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 84 | Cycle | Base Deletion | 37329 | 3.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 85 | Cycle | Base Substitution | 37426 | 58.76 | 28.00 | 27.09 | 0.91 | After |
| REGRESSION.HCC1395_tumor.L004 | 85 | Cycle | Base Insertion | 37209 | 1.42 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 85 | Cycle | Base Deletion | 37209 | 3.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 86 | Cycle | Base Substitution | 37344 | 65.33 | 28.00 | 27.10 | 0.90 | After |
| REGRESSION.HCC1395_tumor.L004 | 86 | Cycle | Base Insertion | 37122 | 1.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 86 | Cycle | Base Deletion | 37122 | 3.86 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 87 | Cycle | Base Substitution | 37432 | 58.89 | 28.00 | 27.38 | 0.62 | After |
| REGRESSION.HCC1395_tumor.L004 | 87 | Cycle | Base Insertion | 37195 | 1.99 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 87 | Cycle | Base Deletion | 37195 | 4.02 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 88 | Cycle | Base Substitution | 37330 | 53.41 | 28.00 | 27.44 | 0.56 | After |
| REGRESSION.HCC1395_tumor.L004 | 88 | Cycle | Base Insertion | 37089 | 1.64 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 88 | Cycle | Base Deletion | 37089 | 3.96 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 89 | Cycle | Base Substitution | 37124 | 66.55 | 27.00 | 27.59 | -0.59 | After |
| REGRESSION.HCC1395_tumor.L004 | 89 | Cycle | Base Insertion | 36875 | 1.85 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 89 | Cycle | Base Deletion | 36875 | 3.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 9 | Cycle | Base Substitution | 39067 | 41.89 | 29.00 | 27.66 | 1.34 | After |
| REGRESSION.HCC1395_tumor.L004 | 9 | Cycle | Base Insertion | 39067 | 4.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 9 | Cycle | Base Deletion | 39067 | 2.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 90 | Cycle | Base Substitution | 37128 | 55.69 | 28.00 | 26.96 | 1.04 | After |
| REGRESSION.HCC1395_tumor.L004 | 90 | Cycle | Base Insertion | 36875 | 1.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 90 | Cycle | Base Deletion | 36875 | 3.31 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 91 | Cycle | Base Substitution | 37085 | 60.96 | 28.00 | 27.37 | 0.63 | After |
| REGRESSION.HCC1395_tumor.L004 | 91 | Cycle | Base Insertion | 36850 | 1.55 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 91 | Cycle | Base Deletion | 36850 | 3.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 92 | Cycle | Base Substitution | 37147 | 66.62 | 27.00 | 27.18 | -0.18 | After |
| REGRESSION.HCC1395_tumor.L004 | 92 | Cycle | Base Insertion | 36907 | 1.09 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 92 | Cycle | Base Deletion | 36907 | 3.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 93 | Cycle | Base Substitution | 37017 | 54.08 | 28.00 | 27.10 | 0.90 | After |
| REGRESSION.HCC1395_tumor.L004 | 93 | Cycle | Base Insertion | 36773 | 1.84 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 93 | Cycle | Base Deletion | 36773 | 4.37 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 94 | Cycle | Base Substitution | 37046 | 64.16 | 28.00 | 27.21 | 0.79 | After |
| REGRESSION.HCC1395_tumor.L004 | 94 | Cycle | Base Insertion | 36813 | 2.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 94 | Cycle | Base Deletion | 36813 | 5.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 95 | Cycle | Base Substitution | 36883 | 55.55 | 28.00 | 26.87 | 1.13 | After |
| REGRESSION.HCC1395_tumor.L004 | 95 | Cycle | Base Insertion | 36614 | 1.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 95 | Cycle | Base Deletion | 36614 | 4.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 96 | Cycle | Base Substitution | 36879 | 67.14 | 27.00 | 26.95 | 0.05 | After |
| REGRESSION.HCC1395_tumor.L004 | 96 | Cycle | Base Insertion | 36600 | 2.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 96 | Cycle | Base Deletion | 36600 | 4.44 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 97 | Cycle | Base Substitution | 36700 | 57.53 | 28.00 | 27.18 | 0.82 | After |
| REGRESSION.HCC1395_tumor.L004 | 97 | Cycle | Base Insertion | 36413 | 3.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 97 | Cycle | Base Deletion | 36413 | 4.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 98 | Cycle | Base Substitution | 36726 | 60.51 | 28.00 | 27.11 | 0.89 | After |
| REGRESSION.HCC1395_tumor.L004 | 98 | Cycle | Base Insertion | 36433 | 3.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 98 | Cycle | Base Deletion | 36433 | 4.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 99 | Cycle | Base Substitution | 36586 | 60.23 | 28.00 | 27.04 | 0.96 | After |
| REGRESSION.HCC1395_tumor.L004 | 99 | Cycle | Base Insertion | 36304 | 1.26 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 99 | Cycle | Base Deletion | 36304 | 3.61 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 10 | QualityScore | Base Substitution | 34544 | 3729.58 | 10.00 | 10.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 11 | QualityScore | Base Substitution | 15054 | 1066.51 | 11.00 | 11.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 12 | QualityScore | Base Substitution | 11831 | 680.44 | 12.00 | 12.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 13 | QualityScore | Base Substitution | 21380 | 738.01 | 14.00 | 13.00 | 1.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 14 | QualityScore | Base Substitution | 12745 | 194.90 | 17.00 | 14.00 | 3.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 15 | QualityScore | Base Substitution | 17122 | 13.79 | 21.00 | 15.00 | 6.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 16 | QualityScore | Base Substitution | 8343 | 4.05 | 20.00 | 16.00 | 4.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 17 | QualityScore | Base Substitution | 14313 | 3.25 | 22.00 | 17.00 | 5.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 22 | QualityScore | Base Substitution | 8004 | 2.59 | 24.00 | 22.00 | 2.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 23 | QualityScore | Base Substitution | 39280 | 206.75 | 23.00 | 23.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 24 | QualityScore | Base Substitution | 124983 | 637.17 | 23.00 | 24.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 25 | QualityScore | Base Substitution | 102909 | 294.29 | 25.00 | 25.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 26 | QualityScore | Base Substitution | 66231 | 101.49 | 27.00 | 26.00 | 1.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 28 | QualityScore | Base Substitution | 7946 | 0.43 | 29.00 | 28.00 | 1.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 29 | QualityScore | Base Substitution | 68841 | 111.36 | 28.00 | 29.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 30 | QualityScore | Base Substitution | 2568978 | 1627.44 | 32.00 | 30.00 | 2.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 31 | QualityScore | Base Substitution | 2880623 | 1303.41 | 33.00 | 31.00 | 2.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 32 | QualityScore | Base Substitution | 4711102 | 1061.41 | 36.00 | 32.00 | 4.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 33 | QualityScore | Base Substitution | 294060 | 47.68 | 35.00 | 33.00 | 2.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 45 | QualityScore | Base Insertion | 11053525 | 489.41 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 45 | QualityScore | Base Deletion | 11053525 | 1030.47 | 41.00 | 45.00 | -4.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 7 | QualityScore | Base Substitution | 182 | 34.00 | 7.00 | 7.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 8 | QualityScore | Base Substitution | 8312 | 1437.44 | 8.00 | 8.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L004 | 9 | QualityScore | Base Substitution | 36742 | 5289.50 | 8.00 | 9.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L005 | AA | Context | Base Substitution | 826822 | 1750.34 | 27.00 | 25.55 | 1.45 | After |
| REGRESSION.HCC1395_tumor.L005 | AAA | Context | Base Insertion | 293115 | 54.70 | 43.00 | 45.00 | -2.00 | After |
| REGRESSION.HCC1395_tumor.L005 | AAA | Context | Base Deletion | 293115 | 186.66 | 37.00 | 45.00 | -8.00 | After |
| REGRESSION.HCC1395_tumor.L005 | AAC | Context | Base Insertion | 131652 | 3.42 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | AAC | Context | Base Deletion | 131652 | 7.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | AAG | Context | Base Insertion | 197200 | 4.09 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | AAG | Context | Base Deletion | 197200 | 10.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | AAT | Context | Base Insertion | 171676 | 2.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | AAT | Context | Base Deletion | 171676 | 14.55 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L005 | AC | Context | Base Substitution | 529374 | 1768.33 | 25.00 | 24.72 | 0.28 | After |
| REGRESSION.HCC1395_tumor.L005 | ACA | Context | Base Insertion | 204101 | 19.62 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L005 | ACA | Context | Base Deletion | 204101 | 37.75 | 43.00 | 45.00 | -2.00 | After |
| REGRESSION.HCC1395_tumor.L005 | ACC | Context | Base Insertion | 146295 | 5.85 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | ACC | Context | Base Deletion | 146295 | 7.85 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | ACG | Context | Base Insertion | 30640 | 0.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | ACG | Context | Base Deletion | 30640 | 3.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | ACT | Context | Base Insertion | 157102 | 0.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | ACT | Context | Base Deletion | 157102 | 11.38 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | AG | Context | Base Substitution | 797009 | 585.32 | 31.00 | 28.80 | 2.20 | After |
| REGRESSION.HCC1395_tumor.L005 | AGA | Context | Base Insertion | 221126 | 5.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | AGA | Context | Base Deletion | 221126 | 11.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | AGC | Context | Base Insertion | 191933 | 1.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | AGC | Context | Base Deletion | 191933 | 7.26 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | AGG | Context | Base Insertion | 227313 | 13.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | AGG | Context | Base Deletion | 227313 | 7.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | AGT | Context | Base Insertion | 153563 | 3.61 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | AGT | Context | Base Deletion | 153563 | 5.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | AT | Context | Base Substitution | 596692 | 618.47 | 30.00 | 27.62 | 2.38 | After |
| REGRESSION.HCC1395_tumor.L005 | ATA | Context | Base Insertion | 132778 | 9.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | ATA | Context | Base Deletion | 132778 | 5.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | ATC | Context | Base Insertion | 120845 | 1.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | ATC | Context | Base Deletion | 120845 | 8.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | ATG | Context | Base Insertion | 172828 | 4.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | ATG | Context | Base Deletion | 172828 | 2.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | ATT | Context | Base Insertion | 180268 | 2.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | ATT | Context | Base Deletion | 180268 | 7.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | CA | Context | Base Substitution | 854324 | 1748.89 | 27.00 | 26.47 | 0.53 | After |
| REGRESSION.HCC1395_tumor.L005 | CAA | Context | Base Insertion | 170950 | 3.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | CAA | Context | Base Deletion | 170950 | 9.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | CAC | Context | Base Insertion | 183698 | 22.54 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L005 | CAC | Context | Base Deletion | 183698 | 34.31 | 43.00 | 45.00 | -2.00 | After |
| REGRESSION.HCC1395_tumor.L005 | CAG | Context | Base Insertion | 291545 | 7.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | CAG | Context | Base Deletion | 291545 | 12.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | CAT | Context | Base Insertion | 169135 | 5.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | CAT | Context | Base Deletion | 169135 | 2.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | CC | Context | Base Substitution | 765061 | 2438.13 | 25.00 | 24.59 | 0.41 | After |
| REGRESSION.HCC1395_tumor.L005 | CCA | Context | Base Insertion | 245375 | 4.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | CCA | Context | Base Deletion | 245375 | 5.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | CCC | Context | Base Insertion | 213129 | 9.21 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | CCC | Context | Base Deletion | 213129 | 15.95 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L005 | CCG | Context | Base Insertion | 53288 | 1.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | CCG | Context | Base Deletion | 53288 | 5.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | CCT | Context | Base Insertion | 242968 | 2.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | CCT | Context | Base Deletion | 242968 | 11.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | CG | Context | Base Substitution | 160153 | 569.26 | 24.00 | 24.84 | -0.84 | After |
| REGRESSION.HCC1395_tumor.L005 | CGA | Context | Base Insertion | 56245 | 0.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | CGA | Context | Base Deletion | 56245 | 0.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | CGC | Context | Base Insertion | 80711 | 0.84 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | CGC | Context | Base Deletion | 80711 | 6.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | CGG | Context | Base Insertion | 97192 | 1.21 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | CGG | Context | Base Deletion | 97192 | 6.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | CGT | Context | Base Insertion | 62549 | 0.79 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | CGT | Context | Base Deletion | 62549 | 1.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | CT | Context | Base Substitution | 838109 | 426.94 | 33.00 | 29.37 | 3.63 | After |
| REGRESSION.HCC1395_tumor.L005 | CTA | Context | Base Insertion | 96374 | 0.64 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | CTA | Context | Base Deletion | 96374 | 5.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | CTC | Context | Base Insertion | 201872 | 5.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | CTC | Context | Base Deletion | 201872 | 16.05 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L005 | CTG | Context | Base Insertion | 292945 | 3.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | CTG | Context | Base Deletion | 292945 | 10.86 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | CTT | Context | Base Insertion | 208156 | 7.85 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | CTT | Context | Base Deletion | 208156 | 10.98 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | GA | Context | Base Substitution | 699558 | 1051.95 | 28.00 | 26.54 | 1.46 | After |
| REGRESSION.HCC1395_tumor.L005 | GAA | Context | Base Insertion | 207424 | 5.55 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | GAA | Context | Base Deletion | 207424 | 9.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | GAC | Context | Base Insertion | 117505 | 2.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | GAC | Context | Base Deletion | 117505 | 6.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | GAG | Context | Base Insertion | 206651 | 3.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | GAG | Context | Base Deletion | 206651 | 10.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | GAT | Context | Base Insertion | 125022 | 0.95 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | GAT | Context | Base Deletion | 125022 | 1.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | GC | Context | Base Substitution | 662485 | 1468.61 | 27.00 | 25.91 | 1.09 | After |
| REGRESSION.HCC1395_tumor.L005 | GCA | Context | Base Insertion | 204272 | 3.55 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | GCA | Context | Base Deletion | 204272 | 4.29 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | GCC | Context | Base Insertion | 199383 | 3.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | GCC | Context | Base Deletion | 199383 | 8.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | GCG | Context | Base Insertion | 48803 | 2.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | GCG | Context | Base Deletion | 48803 | 4.56 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | GCT | Context | Base Insertion | 209736 | 3.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | GCT | Context | Base Deletion | 209736 | 5.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | GG | Context | Base Substitution | 789940 | 764.02 | 30.00 | 27.69 | 2.31 | After |
| REGRESSION.HCC1395_tumor.L005 | GGA | Context | Base Insertion | 214073 | 18.92 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L005 | GGA | Context | Base Deletion | 214073 | 14.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | GGC | Context | Base Insertion | 196544 | 4.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | GGC | Context | Base Deletion | 196544 | 4.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | GGG | Context | Base Insertion | 218515 | 11.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | GGG | Context | Base Deletion | 218515 | 24.52 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L005 | GGT | Context | Base Insertion | 158246 | 1.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | GGT | Context | Base Deletion | 158246 | 4.31 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | GT | Context | Base Substitution | 588006 | 1019.97 | 28.00 | 26.93 | 1.07 | After |
| REGRESSION.HCC1395_tumor.L005 | GTA | Context | Base Insertion | 100360 | 1.31 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | GTA | Context | Base Deletion | 100360 | 2.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | GTC | Context | Base Insertion | 126100 | 1.64 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | GTC | Context | Base Deletion | 126100 | 3.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | GTG | Context | Base Insertion | 200094 | 11.61 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | GTG | Context | Base Deletion | 200094 | 29.89 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L005 | GTT | Context | Base Insertion | 148065 | 3.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | GTT | Context | Base Deletion | 148065 | 10.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | TA | Context | Base Substitution | 478585 | 1202.41 | 26.00 | 25.02 | 0.98 | After |
| REGRESSION.HCC1395_tumor.L005 | TAA | Context | Base Insertion | 148068 | 10.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | TAA | Context | Base Deletion | 148068 | 11.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | TAC | Context | Base Insertion | 93141 | 0.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | TAC | Context | Base Deletion | 93141 | 5.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | TAG | Context | Base Insertion | 95656 | 0.94 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | TAG | Context | Base Deletion | 95656 | 0.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | TAT | Context | Base Insertion | 126550 | 2.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | TAT | Context | Base Deletion | 126550 | 5.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | TC | Context | Base Substitution | 644791 | 1569.03 | 26.00 | 26.18 | -0.18 | After |
| REGRESSION.HCC1395_tumor.L005 | TCA | Context | Base Insertion | 193907 | 6.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | TCA | Context | Base Deletion | 193907 | 13.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | TCC | Context | Base Insertion | 201157 | 34.26 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L005 | TCC | Context | Base Deletion | 201157 | 8.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | TCG | Context | Base Insertion | 26268 | 0.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | TCG | Context | Base Deletion | 26268 | 0.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | TCT | Context | Base Insertion | 222463 | 7.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | TCT | Context | Base Deletion | 222463 | 12.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | TG | Context | Base Substitution | 841606 | 355.64 | 33.00 | 29.40 | 3.60 | After |
| REGRESSION.HCC1395_tumor.L005 | TGA | Context | Base Insertion | 202820 | 1.18 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | TGA | Context | Base Deletion | 202820 | 4.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | TGC | Context | Base Insertion | 189097 | 3.88 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | TGC | Context | Base Deletion | 189097 | 3.64 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | TGG | Context | Base Insertion | 241080 | 4.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | TGG | Context | Base Deletion | 241080 | 6.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | TGT | Context | Base Insertion | 209856 | 13.56 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | TGT | Context | Base Deletion | 209856 | 32.33 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L005 | TT | Context | Base Substitution | 832810 | 911.23 | 30.00 | 28.29 | 1.71 | After |
| REGRESSION.HCC1395_tumor.L005 | TTA | Context | Base Insertion | 145489 | 7.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | TTA | Context | Base Deletion | 145489 | 7.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | TTC | Context | Base Insertion | 192013 | 2.88 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | TTC | Context | Base Deletion | 192013 | 14.07 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | TTG | Context | Base Insertion | 169813 | 2.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | TTG | Context | Base Deletion | 169813 | 7.81 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | TTT | Context | Base Insertion | 290823 | 50.58 | 43.00 | 45.00 | -2.00 | After |
| REGRESSION.HCC1395_tumor.L005 | TTT | Context | Base Deletion | 290823 | 170.25 | 38.00 | 45.00 | -7.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -1 | Cycle | Base Substitution | 38477 | 141.22 | 24.00 | 23.52 | 0.48 | After |
| REGRESSION.HCC1395_tumor.L005 | -10 | Cycle | Base Substitution | 38809 | 60.31 | 28.00 | 27.46 | 0.54 | After |
| REGRESSION.HCC1395_tumor.L005 | -10 | Cycle | Base Insertion | 38809 | 0.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -10 | Cycle | Base Deletion | 38809 | 2.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -100 | Cycle | Base Substitution | 36192 | 66.20 | 27.00 | 26.58 | 0.42 | After |
| REGRESSION.HCC1395_tumor.L005 | -100 | Cycle | Base Insertion | 35871 | 1.30 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -100 | Cycle | Base Deletion | 35871 | 4.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -101 | Cycle | Base Substitution | 36198 | 100.13 | 26.00 | 25.95 | 0.05 | After |
| REGRESSION.HCC1395_tumor.L005 | -101 | Cycle | Base Insertion | 35867 | 1.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -101 | Cycle | Base Deletion | 35867 | 3.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -102 | Cycle | Base Substitution | 36080 | 69.42 | 27.00 | 26.47 | 0.53 | After |
| REGRESSION.HCC1395_tumor.L005 | -102 | Cycle | Base Insertion | 35748 | 1.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -102 | Cycle | Base Deletion | 35748 | 4.21 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -103 | Cycle | Base Substitution | 36040 | 86.08 | 26.00 | 25.88 | 0.12 | After |
| REGRESSION.HCC1395_tumor.L005 | -103 | Cycle | Base Insertion | 35718 | 3.31 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -103 | Cycle | Base Deletion | 35718 | 3.84 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -104 | Cycle | Base Substitution | 35895 | 75.07 | 27.00 | 26.60 | 0.40 | After |
| REGRESSION.HCC1395_tumor.L005 | -104 | Cycle | Base Insertion | 35584 | 2.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -104 | Cycle | Base Deletion | 35584 | 3.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -105 | Cycle | Base Substitution | 35702 | 68.05 | 27.00 | 26.38 | 0.62 | After |
| REGRESSION.HCC1395_tumor.L005 | -105 | Cycle | Base Insertion | 35383 | 3.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -105 | Cycle | Base Deletion | 35383 | 3.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -106 | Cycle | Base Substitution | 35738 | 73.34 | 27.00 | 26.53 | 0.47 | After |
| REGRESSION.HCC1395_tumor.L005 | -106 | Cycle | Base Insertion | 35423 | 1.07 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -106 | Cycle | Base Deletion | 35423 | 3.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -107 | Cycle | Base Substitution | 35527 | 75.33 | 27.00 | 26.42 | 0.58 | After |
| REGRESSION.HCC1395_tumor.L005 | -107 | Cycle | Base Insertion | 35200 | 1.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -107 | Cycle | Base Deletion | 35200 | 3.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -108 | Cycle | Base Substitution | 35563 | 80.56 | 26.00 | 26.64 | -0.64 | After |
| REGRESSION.HCC1395_tumor.L005 | -108 | Cycle | Base Insertion | 35234 | 0.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -108 | Cycle | Base Deletion | 35234 | 3.07 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -109 | Cycle | Base Substitution | 35525 | 73.75 | 27.00 | 26.48 | 0.52 | After |
| REGRESSION.HCC1395_tumor.L005 | -109 | Cycle | Base Insertion | 35207 | 1.98 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -109 | Cycle | Base Deletion | 35207 | 2.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -11 | Cycle | Base Substitution | 38638 | 55.92 | 28.00 | 27.56 | 0.44 | After |
| REGRESSION.HCC1395_tumor.L005 | -11 | Cycle | Base Insertion | 38638 | 1.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -11 | Cycle | Base Deletion | 38638 | 2.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -110 | Cycle | Base Substitution | 35437 | 79.53 | 26.00 | 26.52 | -0.52 | After |
| REGRESSION.HCC1395_tumor.L005 | -110 | Cycle | Base Insertion | 35102 | 1.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -110 | Cycle | Base Deletion | 35102 | 2.79 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -111 | Cycle | Base Substitution | 35369 | 70.49 | 27.00 | 26.54 | 0.46 | After |
| REGRESSION.HCC1395_tumor.L005 | -111 | Cycle | Base Insertion | 35039 | 1.79 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -111 | Cycle | Base Deletion | 35039 | 3.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -112 | Cycle | Base Substitution | 35290 | 64.96 | 27.00 | 26.35 | 0.65 | After |
| REGRESSION.HCC1395_tumor.L005 | -112 | Cycle | Base Insertion | 34937 | 0.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -112 | Cycle | Base Deletion | 34937 | 3.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -113 | Cycle | Base Substitution | 35165 | 90.82 | 26.00 | 26.36 | -0.36 | After |
| REGRESSION.HCC1395_tumor.L005 | -113 | Cycle | Base Insertion | 34811 | 1.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -113 | Cycle | Base Deletion | 34811 | 4.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -114 | Cycle | Base Substitution | 34972 | 86.51 | 26.00 | 26.30 | -0.30 | After |
| REGRESSION.HCC1395_tumor.L005 | -114 | Cycle | Base Insertion | 34634 | 1.02 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -114 | Cycle | Base Deletion | 34634 | 3.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -115 | Cycle | Base Substitution | 34941 | 93.80 | 26.00 | 26.32 | -0.32 | After |
| REGRESSION.HCC1395_tumor.L005 | -115 | Cycle | Base Insertion | 34579 | 1.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -115 | Cycle | Base Deletion | 34579 | 3.42 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -116 | Cycle | Base Substitution | 34839 | 76.98 | 27.00 | 26.38 | 0.62 | After |
| REGRESSION.HCC1395_tumor.L005 | -116 | Cycle | Base Insertion | 34479 | 1.36 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -116 | Cycle | Base Deletion | 34479 | 2.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -117 | Cycle | Base Substitution | 34867 | 86.75 | 26.00 | 25.75 | 0.25 | After |
| REGRESSION.HCC1395_tumor.L005 | -117 | Cycle | Base Insertion | 34503 | 0.73 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -117 | Cycle | Base Deletion | 34503 | 2.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -118 | Cycle | Base Substitution | 34718 | 90.06 | 26.00 | 26.22 | -0.22 | After |
| REGRESSION.HCC1395_tumor.L005 | -118 | Cycle | Base Insertion | 34350 | 0.88 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -118 | Cycle | Base Deletion | 34350 | 2.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -119 | Cycle | Base Substitution | 34685 | 83.89 | 26.00 | 26.28 | -0.28 | After |
| REGRESSION.HCC1395_tumor.L005 | -119 | Cycle | Base Insertion | 34326 | 0.38 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -119 | Cycle | Base Deletion | 34326 | 3.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -12 | Cycle | Base Substitution | 38716 | 61.48 | 28.00 | 27.69 | 0.31 | After |
| REGRESSION.HCC1395_tumor.L005 | -12 | Cycle | Base Insertion | 38716 | 1.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -12 | Cycle | Base Deletion | 38716 | 2.85 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -120 | Cycle | Base Substitution | 34596 | 72.98 | 27.00 | 26.44 | 0.56 | After |
| REGRESSION.HCC1395_tumor.L005 | -120 | Cycle | Base Insertion | 34241 | 0.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -120 | Cycle | Base Deletion | 34241 | 2.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -121 | Cycle | Base Substitution | 34456 | 63.70 | 27.00 | 26.25 | 0.75 | After |
| REGRESSION.HCC1395_tumor.L005 | -121 | Cycle | Base Insertion | 34106 | 0.94 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -121 | Cycle | Base Deletion | 34106 | 2.73 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -122 | Cycle | Base Substitution | 34409 | 75.70 | 27.00 | 26.46 | 0.54 | After |
| REGRESSION.HCC1395_tumor.L005 | -122 | Cycle | Base Insertion | 34062 | 0.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -122 | Cycle | Base Deletion | 34062 | 3.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -123 | Cycle | Base Substitution | 34338 | 75.01 | 27.00 | 26.20 | 0.80 | After |
| REGRESSION.HCC1395_tumor.L005 | -123 | Cycle | Base Insertion | 33970 | 0.61 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -123 | Cycle | Base Deletion | 33970 | 2.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -124 | Cycle | Base Substitution | 34241 | 103.43 | 25.00 | 25.62 | -0.62 | After |
| REGRESSION.HCC1395_tumor.L005 | -124 | Cycle | Base Insertion | 33853 | 0.64 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -124 | Cycle | Base Deletion | 33853 | 2.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -125 | Cycle | Base Substitution | 34244 | 74.33 | 27.00 | 26.45 | 0.55 | After |
| REGRESSION.HCC1395_tumor.L005 | -125 | Cycle | Base Insertion | 33851 | 0.79 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -125 | Cycle | Base Deletion | 33851 | 2.85 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -126 | Cycle | Base Substitution | 34004 | 62.81 | 27.00 | 26.68 | 0.32 | After |
| REGRESSION.HCC1395_tumor.L005 | -126 | Cycle | Base Insertion | 33624 | 0.46 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -126 | Cycle | Base Deletion | 33624 | 2.47 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -127 | Cycle | Base Substitution | 33883 | 65.27 | 27.00 | 26.44 | 0.56 | After |
| REGRESSION.HCC1395_tumor.L005 | -127 | Cycle | Base Insertion | 33486 | 0.86 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -127 | Cycle | Base Deletion | 33486 | 3.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -128 | Cycle | Base Substitution | 33837 | 71.21 | 27.00 | 26.32 | 0.68 | After |
| REGRESSION.HCC1395_tumor.L005 | -128 | Cycle | Base Insertion | 33429 | 1.99 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -128 | Cycle | Base Deletion | 33429 | 3.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -129 | Cycle | Base Substitution | 33822 | 82.00 | 26.00 | 26.15 | -0.15 | After |
| REGRESSION.HCC1395_tumor.L005 | -129 | Cycle | Base Insertion | 33415 | 0.95 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -129 | Cycle | Base Deletion | 33415 | 3.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -13 | Cycle | Base Substitution | 38637 | 63.37 | 28.00 | 27.55 | 0.45 | After |
| REGRESSION.HCC1395_tumor.L005 | -13 | Cycle | Base Insertion | 38637 | 2.07 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -13 | Cycle | Base Deletion | 38637 | 3.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -130 | Cycle | Base Substitution | 33571 | 77.91 | 26.00 | 26.34 | -0.34 | After |
| REGRESSION.HCC1395_tumor.L005 | -130 | Cycle | Base Insertion | 33163 | 1.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -130 | Cycle | Base Deletion | 33163 | 3.88 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -131 | Cycle | Base Substitution | 33552 | 81.20 | 26.00 | 26.09 | -0.09 | After |
| REGRESSION.HCC1395_tumor.L005 | -131 | Cycle | Base Insertion | 33131 | 1.10 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -131 | Cycle | Base Deletion | 33131 | 3.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -132 | Cycle | Base Substitution | 33401 | 78.47 | 26.00 | 26.12 | -0.12 | After |
| REGRESSION.HCC1395_tumor.L005 | -132 | Cycle | Base Insertion | 33002 | 1.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -132 | Cycle | Base Deletion | 33002 | 2.42 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -133 | Cycle | Base Substitution | 33346 | 71.48 | 27.00 | 26.21 | 0.79 | After |
| REGRESSION.HCC1395_tumor.L005 | -133 | Cycle | Base Insertion | 32949 | 1.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -133 | Cycle | Base Deletion | 32949 | 2.61 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -134 | Cycle | Base Substitution | 33239 | 81.84 | 26.00 | 26.06 | -0.06 | After |
| REGRESSION.HCC1395_tumor.L005 | -134 | Cycle | Base Insertion | 32825 | 1.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -134 | Cycle | Base Deletion | 32825 | 1.98 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -135 | Cycle | Base Substitution | 33115 | 87.55 | 26.00 | 26.20 | -0.20 | After |
| REGRESSION.HCC1395_tumor.L005 | -135 | Cycle | Base Insertion | 32708 | 3.10 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -135 | Cycle | Base Deletion | 32708 | 1.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -136 | Cycle | Base Substitution | 33040 | 56.44 | 27.00 | 26.34 | 0.66 | After |
| REGRESSION.HCC1395_tumor.L005 | -136 | Cycle | Base Insertion | 32624 | 1.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -136 | Cycle | Base Deletion | 32624 | 1.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -137 | Cycle | Base Substitution | 32915 | 83.66 | 26.00 | 26.10 | -0.10 | After |
| REGRESSION.HCC1395_tumor.L005 | -137 | Cycle | Base Insertion | 32484 | 0.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -137 | Cycle | Base Deletion | 32484 | 1.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -138 | Cycle | Base Substitution | 32807 | 76.32 | 26.00 | 25.54 | 0.46 | After |
| REGRESSION.HCC1395_tumor.L005 | -138 | Cycle | Base Insertion | 32335 | 0.44 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -138 | Cycle | Base Deletion | 32335 | 1.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -139 | Cycle | Base Substitution | 32779 | 66.48 | 27.00 | 26.42 | 0.58 | After |
| REGRESSION.HCC1395_tumor.L005 | -139 | Cycle | Base Insertion | 32309 | 2.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -139 | Cycle | Base Deletion | 32309 | 1.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -14 | Cycle | Base Substitution | 38777 | 52.26 | 28.00 | 27.71 | 0.29 | After |
| REGRESSION.HCC1395_tumor.L005 | -14 | Cycle | Base Insertion | 38777 | 1.18 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -14 | Cycle | Base Deletion | 38777 | 3.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -140 | Cycle | Base Substitution | 32630 | 62.96 | 27.00 | 26.25 | 0.75 | After |
| REGRESSION.HCC1395_tumor.L005 | -140 | Cycle | Base Insertion | 32122 | 0.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -140 | Cycle | Base Deletion | 32122 | 0.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -141 | Cycle | Base Substitution | 32471 | 56.04 | 27.00 | 26.20 | 0.80 | After |
| REGRESSION.HCC1395_tumor.L005 | -141 | Cycle | Base Insertion | 31941 | 0.61 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -141 | Cycle | Base Deletion | 31941 | 0.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -142 | Cycle | Base Substitution | 32396 | 49.16 | 27.00 | 26.37 | 0.63 | After |
| REGRESSION.HCC1395_tumor.L005 | -142 | Cycle | Base Insertion | 31814 | 0.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -142 | Cycle | Base Deletion | 31814 | 0.72 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -143 | Cycle | Base Substitution | 32295 | 55.60 | 27.00 | 26.26 | 0.74 | After |
| REGRESSION.HCC1395_tumor.L005 | -143 | Cycle | Base Insertion | 31641 | 0.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -143 | Cycle | Base Deletion | 31641 | 0.51 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -144 | Cycle | Base Substitution | 32065 | 46.44 | 28.00 | 26.44 | 1.56 | After |
| REGRESSION.HCC1395_tumor.L005 | -144 | Cycle | Base Insertion | 31357 | 0.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -144 | Cycle | Base Deletion | 31357 | 0.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -145 | Cycle | Base Substitution | 32086 | 52.33 | 27.00 | 26.40 | 0.60 | After |
| REGRESSION.HCC1395_tumor.L005 | -145 | Cycle | Base Insertion | 24781 | 0.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -145 | Cycle | Base Deletion | 24781 | 0.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -146 | Cycle | Base Substitution | 31884 | 21.48 | 28.00 | 26.36 | 1.64 | After |
| REGRESSION.HCC1395_tumor.L005 | -146 | Cycle | Base Insertion | 24697 | 2.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -146 | Cycle | Base Deletion | 24697 | 0.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -147 | Cycle | Base Substitution | 31743 | 28.62 | 26.00 | 23.11 | 2.89 | After |
| REGRESSION.HCC1395_tumor.L005 | -148 | Cycle | Base Substitution | 31483 | 27.85 | 23.00 | 16.12 | 6.88 | After |
| REGRESSION.HCC1395_tumor.L005 | -149 | Cycle | Base Substitution | 19549 | 23.00 | 22.00 | 14.17 | 7.83 | After |
| REGRESSION.HCC1395_tumor.L005 | -15 | Cycle | Base Substitution | 38755 | 41.62 | 29.00 | 27.72 | 1.28 | After |
| REGRESSION.HCC1395_tumor.L005 | -15 | Cycle | Base Insertion | 38755 | 2.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -15 | Cycle | Base Deletion | 38755 | 3.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -150 | Cycle | Base Substitution | 6858 | 15.20 | 26.00 | 26.57 | -0.57 | After |
| REGRESSION.HCC1395_tumor.L005 | -16 | Cycle | Base Substitution | 38784 | 53.76 | 28.00 | 27.63 | 0.37 | After |
| REGRESSION.HCC1395_tumor.L005 | -16 | Cycle | Base Insertion | 38784 | 1.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -16 | Cycle | Base Deletion | 38784 | 3.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -17 | Cycle | Base Substitution | 38712 | 56.05 | 28.00 | 27.84 | 0.16 | After |
| REGRESSION.HCC1395_tumor.L005 | -17 | Cycle | Base Insertion | 38712 | 1.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -17 | Cycle | Base Deletion | 38712 | 3.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -18 | Cycle | Base Substitution | 38694 | 45.45 | 29.00 | 27.76 | 1.24 | After |
| REGRESSION.HCC1395_tumor.L005 | -18 | Cycle | Base Insertion | 38694 | 1.98 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -18 | Cycle | Base Deletion | 38694 | 3.98 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -19 | Cycle | Base Substitution | 38576 | 49.60 | 28.00 | 27.75 | 0.25 | After |
| REGRESSION.HCC1395_tumor.L005 | -19 | Cycle | Base Insertion | 38576 | 2.85 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -19 | Cycle | Base Deletion | 38576 | 3.07 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -2 | Cycle | Base Substitution | 38904 | 125.75 | 25.00 | 25.66 | -0.66 | After |
| REGRESSION.HCC1395_tumor.L005 | -20 | Cycle | Base Substitution | 38629 | 52.14 | 28.00 | 27.78 | 0.22 | After |
| REGRESSION.HCC1395_tumor.L005 | -20 | Cycle | Base Insertion | 38629 | 1.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -20 | Cycle | Base Deletion | 38629 | 3.55 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -21 | Cycle | Base Substitution | 38577 | 53.18 | 28.00 | 27.87 | 0.13 | After |
| REGRESSION.HCC1395_tumor.L005 | -21 | Cycle | Base Insertion | 38577 | 1.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -21 | Cycle | Base Deletion | 38577 | 3.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -22 | Cycle | Base Substitution | 38611 | 42.04 | 29.00 | 27.73 | 1.27 | After |
| REGRESSION.HCC1395_tumor.L005 | -22 | Cycle | Base Insertion | 38611 | 1.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -22 | Cycle | Base Deletion | 38611 | 3.37 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -23 | Cycle | Base Substitution | 38562 | 44.00 | 29.00 | 27.73 | 1.27 | After |
| REGRESSION.HCC1395_tumor.L005 | -23 | Cycle | Base Insertion | 38562 | 1.51 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -23 | Cycle | Base Deletion | 38562 | 3.64 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -24 | Cycle | Base Substitution | 38614 | 57.42 | 28.00 | 27.65 | 0.35 | After |
| REGRESSION.HCC1395_tumor.L005 | -24 | Cycle | Base Insertion | 38613 | 0.84 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -24 | Cycle | Base Deletion | 38613 | 3.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -25 | Cycle | Base Substitution | 38569 | 50.01 | 28.00 | 27.65 | 0.35 | After |
| REGRESSION.HCC1395_tumor.L005 | -25 | Cycle | Base Insertion | 38568 | 0.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -25 | Cycle | Base Deletion | 38568 | 4.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -26 | Cycle | Base Substitution | 38582 | 73.85 | 27.00 | 26.63 | 0.37 | After |
| REGRESSION.HCC1395_tumor.L005 | -26 | Cycle | Base Insertion | 38582 | 1.21 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -26 | Cycle | Base Deletion | 38582 | 3.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -27 | Cycle | Base Substitution | 38521 | 47.85 | 28.00 | 26.83 | 1.17 | After |
| REGRESSION.HCC1395_tumor.L005 | -27 | Cycle | Base Insertion | 38520 | 1.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -27 | Cycle | Base Deletion | 38520 | 3.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -28 | Cycle | Base Substitution | 38561 | 67.45 | 27.00 | 26.69 | 0.31 | After |
| REGRESSION.HCC1395_tumor.L005 | -28 | Cycle | Base Insertion | 38557 | 1.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -28 | Cycle | Base Deletion | 38557 | 3.44 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -29 | Cycle | Base Substitution | 38572 | 66.14 | 27.00 | 26.62 | 0.38 | After |
| REGRESSION.HCC1395_tumor.L005 | -29 | Cycle | Base Insertion | 38565 | 1.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -29 | Cycle | Base Deletion | 38565 | 3.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -3 | Cycle | Base Substitution | 38999 | 126.42 | 25.00 | 25.84 | -0.84 | After |
| REGRESSION.HCC1395_tumor.L005 | -30 | Cycle | Base Substitution | 38612 | 61.62 | 27.00 | 26.67 | 0.33 | After |
| REGRESSION.HCC1395_tumor.L005 | -30 | Cycle | Base Insertion | 38605 | 2.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -30 | Cycle | Base Deletion | 38605 | 4.07 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -31 | Cycle | Base Substitution | 38468 | 56.37 | 28.00 | 26.83 | 1.17 | After |
| REGRESSION.HCC1395_tumor.L005 | -31 | Cycle | Base Insertion | 38459 | 0.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -31 | Cycle | Base Deletion | 38459 | 4.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -32 | Cycle | Base Substitution | 38545 | 53.23 | 28.00 | 27.20 | 0.80 | After |
| REGRESSION.HCC1395_tumor.L005 | -32 | Cycle | Base Insertion | 38541 | 5.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -32 | Cycle | Base Deletion | 38541 | 3.99 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -33 | Cycle | Base Substitution | 38510 | 58.68 | 27.00 | 26.81 | 0.19 | After |
| REGRESSION.HCC1395_tumor.L005 | -33 | Cycle | Base Insertion | 38505 | 0.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -33 | Cycle | Base Deletion | 38505 | 4.09 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -34 | Cycle | Base Substitution | 38561 | 51.18 | 28.00 | 26.84 | 1.16 | After |
| REGRESSION.HCC1395_tumor.L005 | -34 | Cycle | Base Insertion | 38557 | 2.47 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -34 | Cycle | Base Deletion | 38557 | 3.82 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -35 | Cycle | Base Substitution | 38527 | 55.69 | 28.00 | 26.78 | 1.22 | After |
| REGRESSION.HCC1395_tumor.L005 | -35 | Cycle | Base Insertion | 38523 | 0.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -35 | Cycle | Base Deletion | 38523 | 4.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -36 | Cycle | Base Substitution | 38418 | 53.77 | 28.00 | 26.80 | 1.20 | After |
| REGRESSION.HCC1395_tumor.L005 | -36 | Cycle | Base Insertion | 38414 | 0.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -36 | Cycle | Base Deletion | 38414 | 4.81 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -37 | Cycle | Base Substitution | 38486 | 48.05 | 28.00 | 26.90 | 1.10 | After |
| REGRESSION.HCC1395_tumor.L005 | -37 | Cycle | Base Insertion | 38483 | 0.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -37 | Cycle | Base Deletion | 38483 | 4.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -38 | Cycle | Base Substitution | 38476 | 43.76 | 29.00 | 27.37 | 1.63 | After |
| REGRESSION.HCC1395_tumor.L005 | -38 | Cycle | Base Insertion | 38473 | 1.29 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -38 | Cycle | Base Deletion | 38473 | 3.98 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -39 | Cycle | Base Substitution | 38517 | 64.76 | 27.00 | 26.83 | 0.17 | After |
| REGRESSION.HCC1395_tumor.L005 | -39 | Cycle | Base Insertion | 38516 | 1.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -39 | Cycle | Base Deletion | 38516 | 3.42 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -4 | Cycle | Base Substitution | 38839 | 77.45 | 27.00 | 26.03 | 0.97 | After |
| REGRESSION.HCC1395_tumor.L005 | -40 | Cycle | Base Substitution | 38511 | 65.67 | 27.00 | 26.76 | 0.24 | After |
| REGRESSION.HCC1395_tumor.L005 | -40 | Cycle | Base Insertion | 38507 | 1.09 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -40 | Cycle | Base Deletion | 38507 | 3.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -41 | Cycle | Base Substitution | 38444 | 49.09 | 28.00 | 27.11 | 0.89 | After |
| REGRESSION.HCC1395_tumor.L005 | -41 | Cycle | Base Insertion | 38440 | 1.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -41 | Cycle | Base Deletion | 38440 | 3.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -42 | Cycle | Base Substitution | 38383 | 58.88 | 27.00 | 26.82 | 0.18 | After |
| REGRESSION.HCC1395_tumor.L005 | -42 | Cycle | Base Insertion | 38377 | 0.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -42 | Cycle | Base Deletion | 38377 | 3.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -43 | Cycle | Base Substitution | 38406 | 50.47 | 28.00 | 26.95 | 1.05 | After |
| REGRESSION.HCC1395_tumor.L005 | -43 | Cycle | Base Insertion | 38397 | 1.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -43 | Cycle | Base Deletion | 38397 | 3.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -44 | Cycle | Base Substitution | 38280 | 62.95 | 27.00 | 26.81 | 0.19 | After |
| REGRESSION.HCC1395_tumor.L005 | -44 | Cycle | Base Insertion | 38274 | 1.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -44 | Cycle | Base Deletion | 38274 | 3.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -45 | Cycle | Base Substitution | 38252 | 61.12 | 27.00 | 26.87 | 0.13 | After |
| REGRESSION.HCC1395_tumor.L005 | -45 | Cycle | Base Insertion | 38244 | 1.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -45 | Cycle | Base Deletion | 38244 | 3.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -46 | Cycle | Base Substitution | 38369 | 59.50 | 27.00 | 26.91 | 0.09 | After |
| REGRESSION.HCC1395_tumor.L005 | -46 | Cycle | Base Insertion | 38358 | 1.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -46 | Cycle | Base Deletion | 38358 | 3.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -47 | Cycle | Base Substitution | 38383 | 62.54 | 28.00 | 27.17 | 0.83 | After |
| REGRESSION.HCC1395_tumor.L005 | -47 | Cycle | Base Insertion | 38370 | 0.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -47 | Cycle | Base Deletion | 38370 | 2.72 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -48 | Cycle | Base Substitution | 38318 | 58.50 | 27.00 | 26.87 | 0.13 | After |
| REGRESSION.HCC1395_tumor.L005 | -48 | Cycle | Base Insertion | 38302 | 1.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -48 | Cycle | Base Deletion | 38302 | 2.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -49 | Cycle | Base Substitution | 38371 | 54.04 | 28.00 | 26.98 | 1.02 | After |
| REGRESSION.HCC1395_tumor.L005 | -49 | Cycle | Base Insertion | 38351 | 2.02 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -49 | Cycle | Base Deletion | 38351 | 3.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -5 | Cycle | Base Substitution | 38916 | 53.87 | 28.00 | 26.85 | 1.15 | After |
| REGRESSION.HCC1395_tumor.L005 | -5 | Cycle | Base Insertion | 38916 | 0.79 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -5 | Cycle | Base Deletion | 38916 | 1.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -50 | Cycle | Base Substitution | 38351 | 69.98 | 27.00 | 26.80 | 0.20 | After |
| REGRESSION.HCC1395_tumor.L005 | -50 | Cycle | Base Insertion | 38331 | 1.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -50 | Cycle | Base Deletion | 38331 | 2.96 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -51 | Cycle | Base Substitution | 38239 | 62.36 | 27.00 | 26.88 | 0.12 | After |
| REGRESSION.HCC1395_tumor.L005 | -51 | Cycle | Base Insertion | 38218 | 1.82 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -51 | Cycle | Base Deletion | 38218 | 3.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -52 | Cycle | Base Substitution | 38253 | 59.00 | 27.00 | 26.77 | 0.23 | After |
| REGRESSION.HCC1395_tumor.L005 | -52 | Cycle | Base Insertion | 38220 | 1.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -52 | Cycle | Base Deletion | 38220 | 4.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -53 | Cycle | Base Substitution | 38303 | 56.39 | 28.00 | 26.87 | 1.13 | After |
| REGRESSION.HCC1395_tumor.L005 | -53 | Cycle | Base Insertion | 38269 | 1.47 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -53 | Cycle | Base Deletion | 38269 | 3.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -54 | Cycle | Base Substitution | 38413 | 57.69 | 28.00 | 27.05 | 0.95 | After |
| REGRESSION.HCC1395_tumor.L005 | -54 | Cycle | Base Insertion | 38368 | 1.64 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -54 | Cycle | Base Deletion | 38368 | 3.09 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -55 | Cycle | Base Substitution | 38262 | 80.16 | 27.00 | 26.83 | 0.17 | After |
| REGRESSION.HCC1395_tumor.L005 | -55 | Cycle | Base Insertion | 38216 | 4.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -55 | Cycle | Base Deletion | 38216 | 3.64 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -56 | Cycle | Base Substitution | 38209 | 78.95 | 27.00 | 26.97 | 0.03 | After |
| REGRESSION.HCC1395_tumor.L005 | -56 | Cycle | Base Insertion | 38161 | 1.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -56 | Cycle | Base Deletion | 38161 | 3.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -57 | Cycle | Base Substitution | 38301 | 59.94 | 27.00 | 26.85 | 0.15 | After |
| REGRESSION.HCC1395_tumor.L005 | -57 | Cycle | Base Insertion | 38257 | 1.10 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -57 | Cycle | Base Deletion | 38257 | 3.38 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -58 | Cycle | Base Substitution | 38176 | 72.65 | 27.00 | 26.88 | 0.12 | After |
| REGRESSION.HCC1395_tumor.L005 | -58 | Cycle | Base Insertion | 38126 | 0.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -58 | Cycle | Base Deletion | 38126 | 2.96 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -59 | Cycle | Base Substitution | 38098 | 62.59 | 28.00 | 27.11 | 0.89 | After |
| REGRESSION.HCC1395_tumor.L005 | -59 | Cycle | Base Insertion | 38044 | 0.85 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -59 | Cycle | Base Deletion | 38044 | 3.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -6 | Cycle | Base Substitution | 38824 | 64.39 | 28.00 | 27.17 | 0.83 | After |
| REGRESSION.HCC1395_tumor.L005 | -6 | Cycle | Base Insertion | 38824 | 0.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -6 | Cycle | Base Deletion | 38824 | 2.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -60 | Cycle | Base Substitution | 38155 | 69.58 | 27.00 | 26.80 | 0.20 | After |
| REGRESSION.HCC1395_tumor.L005 | -60 | Cycle | Base Insertion | 38104 | 1.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -60 | Cycle | Base Deletion | 38104 | 3.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -61 | Cycle | Base Substitution | 38248 | 68.43 | 27.00 | 26.80 | 0.20 | After |
| REGRESSION.HCC1395_tumor.L005 | -61 | Cycle | Base Insertion | 38186 | 2.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -61 | Cycle | Base Deletion | 38186 | 2.84 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -62 | Cycle | Base Substitution | 38201 | 65.00 | 28.00 | 27.09 | 0.91 | After |
| REGRESSION.HCC1395_tumor.L005 | -62 | Cycle | Base Insertion | 38130 | 1.30 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -62 | Cycle | Base Deletion | 38130 | 2.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -63 | Cycle | Base Substitution | 38085 | 64.30 | 27.00 | 26.87 | 0.13 | After |
| REGRESSION.HCC1395_tumor.L005 | -63 | Cycle | Base Insertion | 38012 | 3.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -63 | Cycle | Base Deletion | 38012 | 2.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -64 | Cycle | Base Substitution | 38036 | 69.01 | 27.00 | 26.86 | 0.14 | After |
| REGRESSION.HCC1395_tumor.L005 | -64 | Cycle | Base Insertion | 37971 | 2.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -64 | Cycle | Base Deletion | 37971 | 2.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -65 | Cycle | Base Substitution | 38047 | 63.33 | 28.00 | 27.05 | 0.95 | After |
| REGRESSION.HCC1395_tumor.L005 | -65 | Cycle | Base Insertion | 37981 | 1.10 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -65 | Cycle | Base Deletion | 37981 | 3.47 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -66 | Cycle | Base Substitution | 38047 | 76.20 | 27.00 | 26.69 | 0.31 | After |
| REGRESSION.HCC1395_tumor.L005 | -66 | Cycle | Base Insertion | 37959 | 1.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -66 | Cycle | Base Deletion | 37959 | 3.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -67 | Cycle | Base Substitution | 38123 | 66.22 | 27.00 | 26.77 | 0.23 | After |
| REGRESSION.HCC1395_tumor.L005 | -67 | Cycle | Base Insertion | 38037 | 0.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -67 | Cycle | Base Deletion | 38037 | 3.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -68 | Cycle | Base Substitution | 38122 | 59.92 | 27.00 | 26.95 | 0.05 | After |
| REGRESSION.HCC1395_tumor.L005 | -68 | Cycle | Base Insertion | 38014 | 0.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -68 | Cycle | Base Deletion | 38014 | 3.94 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -69 | Cycle | Base Substitution | 37944 | 58.91 | 28.00 | 27.08 | 0.92 | After |
| REGRESSION.HCC1395_tumor.L005 | -69 | Cycle | Base Insertion | 37844 | 2.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -69 | Cycle | Base Deletion | 37844 | 3.57 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -7 | Cycle | Base Substitution | 38899 | 60.96 | 27.00 | 26.93 | 0.07 | After |
| REGRESSION.HCC1395_tumor.L005 | -7 | Cycle | Base Insertion | 38899 | 0.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -7 | Cycle | Base Deletion | 38899 | 2.56 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -70 | Cycle | Base Substitution | 38028 | 71.32 | 27.00 | 26.71 | 0.29 | After |
| REGRESSION.HCC1395_tumor.L005 | -70 | Cycle | Base Insertion | 37909 | 2.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -70 | Cycle | Base Deletion | 37909 | 4.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -71 | Cycle | Base Substitution | 37883 | 68.44 | 27.00 | 26.78 | 0.22 | After |
| REGRESSION.HCC1395_tumor.L005 | -71 | Cycle | Base Insertion | 37757 | 1.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -71 | Cycle | Base Deletion | 37757 | 3.85 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -72 | Cycle | Base Substitution | 37851 | 58.08 | 27.00 | 26.86 | 0.14 | After |
| REGRESSION.HCC1395_tumor.L005 | -72 | Cycle | Base Insertion | 37715 | 1.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -72 | Cycle | Base Deletion | 37715 | 2.73 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -73 | Cycle | Base Substitution | 37753 | 47.37 | 28.00 | 27.01 | 0.99 | After |
| REGRESSION.HCC1395_tumor.L005 | -73 | Cycle | Base Insertion | 37619 | 2.21 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -73 | Cycle | Base Deletion | 37619 | 3.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -74 | Cycle | Base Substitution | 37784 | 66.38 | 27.00 | 26.87 | 0.13 | After |
| REGRESSION.HCC1395_tumor.L005 | -74 | Cycle | Base Insertion | 37642 | 1.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -74 | Cycle | Base Deletion | 37642 | 3.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -75 | Cycle | Base Substitution | 37683 | 64.34 | 27.00 | 26.99 | 0.01 | After |
| REGRESSION.HCC1395_tumor.L005 | -75 | Cycle | Base Insertion | 37542 | 2.46 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -75 | Cycle | Base Deletion | 37542 | 3.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -76 | Cycle | Base Substitution | 37626 | 77.41 | 27.00 | 26.56 | 0.44 | After |
| REGRESSION.HCC1395_tumor.L005 | -76 | Cycle | Base Insertion | 37473 | 4.42 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -76 | Cycle | Base Deletion | 37473 | 3.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -77 | Cycle | Base Substitution | 37621 | 65.74 | 27.00 | 26.78 | 0.22 | After |
| REGRESSION.HCC1395_tumor.L005 | -77 | Cycle | Base Insertion | 37465 | 1.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -77 | Cycle | Base Deletion | 37465 | 3.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -78 | Cycle | Base Substitution | 37687 | 71.18 | 27.00 | 26.66 | 0.34 | After |
| REGRESSION.HCC1395_tumor.L005 | -78 | Cycle | Base Insertion | 37519 | 1.42 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -78 | Cycle | Base Deletion | 37519 | 3.98 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -79 | Cycle | Base Substitution | 37770 | 69.54 | 27.00 | 26.93 | 0.07 | After |
| REGRESSION.HCC1395_tumor.L005 | -79 | Cycle | Base Insertion | 37586 | 1.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -79 | Cycle | Base Deletion | 37586 | 4.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -8 | Cycle | Base Substitution | 38799 | 63.80 | 28.00 | 27.17 | 0.83 | After |
| REGRESSION.HCC1395_tumor.L005 | -8 | Cycle | Base Insertion | 38799 | 1.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -8 | Cycle | Base Deletion | 38799 | 2.98 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -80 | Cycle | Base Substitution | 37528 | 72.45 | 27.00 | 27.15 | -0.15 | After |
| REGRESSION.HCC1395_tumor.L005 | -80 | Cycle | Base Insertion | 37345 | 1.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -80 | Cycle | Base Deletion | 37345 | 4.26 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -81 | Cycle | Base Substitution | 37434 | 54.99 | 28.00 | 26.80 | 1.20 | After |
| REGRESSION.HCC1395_tumor.L005 | -81 | Cycle | Base Insertion | 37246 | 0.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -81 | Cycle | Base Deletion | 37246 | 3.61 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -82 | Cycle | Base Substitution | 37423 | 76.92 | 27.00 | 26.75 | 0.25 | After |
| REGRESSION.HCC1395_tumor.L005 | -82 | Cycle | Base Insertion | 37217 | 0.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -82 | Cycle | Base Deletion | 37217 | 2.95 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -83 | Cycle | Base Substitution | 37349 | 75.45 | 27.00 | 26.65 | 0.35 | After |
| REGRESSION.HCC1395_tumor.L005 | -83 | Cycle | Base Insertion | 37135 | 2.07 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -83 | Cycle | Base Deletion | 37135 | 3.56 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -84 | Cycle | Base Substitution | 37216 | 68.67 | 27.00 | 26.55 | 0.45 | After |
| REGRESSION.HCC1395_tumor.L005 | -84 | Cycle | Base Insertion | 36993 | 1.47 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -84 | Cycle | Base Deletion | 36993 | 3.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -85 | Cycle | Base Substitution | 37233 | 81.77 | 27.00 | 26.70 | 0.30 | After |
| REGRESSION.HCC1395_tumor.L005 | -85 | Cycle | Base Insertion | 36994 | 1.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -85 | Cycle | Base Deletion | 36994 | 3.55 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -86 | Cycle | Base Substitution | 37374 | 62.68 | 27.00 | 26.63 | 0.37 | After |
| REGRESSION.HCC1395_tumor.L005 | -86 | Cycle | Base Insertion | 37130 | 2.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -86 | Cycle | Base Deletion | 37130 | 3.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -87 | Cycle | Base Substitution | 37271 | 80.93 | 27.00 | 26.57 | 0.43 | After |
| REGRESSION.HCC1395_tumor.L005 | -87 | Cycle | Base Insertion | 37039 | 1.96 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -87 | Cycle | Base Deletion | 37039 | 3.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -88 | Cycle | Base Substitution | 37072 | 70.36 | 27.00 | 26.52 | 0.48 | After |
| REGRESSION.HCC1395_tumor.L005 | -88 | Cycle | Base Insertion | 36824 | 2.47 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -88 | Cycle | Base Deletion | 36824 | 2.57 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -89 | Cycle | Base Substitution | 37051 | 78.81 | 27.00 | 26.49 | 0.51 | After |
| REGRESSION.HCC1395_tumor.L005 | -89 | Cycle | Base Insertion | 36803 | 1.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -89 | Cycle | Base Deletion | 36803 | 2.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -9 | Cycle | Base Substitution | 38757 | 58.30 | 28.00 | 27.17 | 0.83 | After |
| REGRESSION.HCC1395_tumor.L005 | -9 | Cycle | Base Insertion | 38757 | 1.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -9 | Cycle | Base Deletion | 38757 | 2.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -90 | Cycle | Base Substitution | 36977 | 61.67 | 27.00 | 26.79 | 0.21 | After |
| REGRESSION.HCC1395_tumor.L005 | -90 | Cycle | Base Insertion | 36717 | 1.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -90 | Cycle | Base Deletion | 36717 | 2.86 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -91 | Cycle | Base Substitution | 36870 | 83.00 | 26.00 | 26.33 | -0.33 | After |
| REGRESSION.HCC1395_tumor.L005 | -91 | Cycle | Base Insertion | 36592 | 1.82 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -91 | Cycle | Base Deletion | 36592 | 3.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -92 | Cycle | Base Substitution | 36864 | 73.72 | 27.00 | 26.43 | 0.57 | After |
| REGRESSION.HCC1395_tumor.L005 | -92 | Cycle | Base Insertion | 36595 | 3.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -92 | Cycle | Base Deletion | 36595 | 3.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -93 | Cycle | Base Substitution | 36806 | 73.53 | 27.00 | 26.61 | 0.39 | After |
| REGRESSION.HCC1395_tumor.L005 | -93 | Cycle | Base Insertion | 36532 | 0.96 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -93 | Cycle | Base Deletion | 36532 | 4.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -94 | Cycle | Base Substitution | 36749 | 83.99 | 26.00 | 25.83 | 0.17 | After |
| REGRESSION.HCC1395_tumor.L005 | -94 | Cycle | Base Insertion | 36437 | 0.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -94 | Cycle | Base Deletion | 36437 | 4.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -95 | Cycle | Base Substitution | 36490 | 72.13 | 27.00 | 26.67 | 0.33 | After |
| REGRESSION.HCC1395_tumor.L005 | -95 | Cycle | Base Insertion | 36187 | 0.82 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -95 | Cycle | Base Deletion | 36187 | 3.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -96 | Cycle | Base Substitution | 36460 | 72.27 | 27.00 | 26.56 | 0.44 | After |
| REGRESSION.HCC1395_tumor.L005 | -96 | Cycle | Base Insertion | 36140 | 0.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -96 | Cycle | Base Deletion | 36140 | 4.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -97 | Cycle | Base Substitution | 36439 | 86.23 | 26.00 | 26.58 | -0.58 | After |
| REGRESSION.HCC1395_tumor.L005 | -97 | Cycle | Base Insertion | 36109 | 1.02 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -97 | Cycle | Base Deletion | 36109 | 3.79 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -98 | Cycle | Base Substitution | 36185 | 70.48 | 27.00 | 26.69 | 0.31 | After |
| REGRESSION.HCC1395_tumor.L005 | -98 | Cycle | Base Insertion | 35862 | 2.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -98 | Cycle | Base Deletion | 35862 | 2.96 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -99 | Cycle | Base Substitution | 36306 | 72.05 | 27.00 | 26.61 | 0.39 | After |
| REGRESSION.HCC1395_tumor.L005 | -99 | Cycle | Base Insertion | 35975 | 1.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | -99 | Cycle | Base Deletion | 35975 | 4.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 1 | Cycle | Base Substitution | 38473 | 83.11 | 27.00 | 26.07 | 0.93 | After |
| REGRESSION.HCC1395_tumor.L005 | 10 | Cycle | Base Substitution | 38796 | 34.92 | 29.00 | 28.23 | 0.77 | After |
| REGRESSION.HCC1395_tumor.L005 | 10 | Cycle | Base Insertion | 38796 | 0.96 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 10 | Cycle | Base Deletion | 38796 | 3.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 100 | Cycle | Base Substitution | 36356 | 64.15 | 27.00 | 26.88 | 0.12 | After |
| REGRESSION.HCC1395_tumor.L005 | 100 | Cycle | Base Insertion | 36045 | 1.73 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 100 | Cycle | Base Deletion | 36045 | 3.37 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 101 | Cycle | Base Substitution | 36245 | 61.27 | 27.00 | 26.85 | 0.15 | After |
| REGRESSION.HCC1395_tumor.L005 | 101 | Cycle | Base Insertion | 35927 | 0.72 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 101 | Cycle | Base Deletion | 35927 | 3.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 102 | Cycle | Base Substitution | 36188 | 61.13 | 27.00 | 26.84 | 0.16 | After |
| REGRESSION.HCC1395_tumor.L005 | 102 | Cycle | Base Insertion | 35866 | 1.02 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 102 | Cycle | Base Deletion | 35866 | 4.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 103 | Cycle | Base Substitution | 35981 | 53.76 | 28.00 | 26.89 | 1.11 | After |
| REGRESSION.HCC1395_tumor.L005 | 103 | Cycle | Base Insertion | 35668 | 0.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 103 | Cycle | Base Deletion | 35668 | 3.84 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 104 | Cycle | Base Substitution | 35933 | 56.81 | 28.00 | 27.28 | 0.72 | After |
| REGRESSION.HCC1395_tumor.L005 | 104 | Cycle | Base Insertion | 35620 | 3.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 104 | Cycle | Base Deletion | 35620 | 3.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 105 | Cycle | Base Substitution | 35807 | 58.53 | 27.00 | 26.99 | 0.01 | After |
| REGRESSION.HCC1395_tumor.L005 | 105 | Cycle | Base Insertion | 35493 | 0.94 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 105 | Cycle | Base Deletion | 35493 | 3.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 106 | Cycle | Base Substitution | 35791 | 73.35 | 27.00 | 26.69 | 0.31 | After |
| REGRESSION.HCC1395_tumor.L005 | 106 | Cycle | Base Insertion | 35469 | 1.88 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 106 | Cycle | Base Deletion | 35469 | 2.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 107 | Cycle | Base Substitution | 35801 | 60.70 | 27.00 | 26.81 | 0.19 | After |
| REGRESSION.HCC1395_tumor.L005 | 107 | Cycle | Base Insertion | 35500 | 1.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 107 | Cycle | Base Deletion | 35500 | 2.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 108 | Cycle | Base Substitution | 35687 | 84.16 | 26.00 | 26.63 | -0.63 | After |
| REGRESSION.HCC1395_tumor.L005 | 108 | Cycle | Base Insertion | 35365 | 1.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 108 | Cycle | Base Deletion | 35365 | 2.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 109 | Cycle | Base Substitution | 35612 | 74.04 | 27.00 | 26.72 | 0.28 | After |
| REGRESSION.HCC1395_tumor.L005 | 109 | Cycle | Base Insertion | 35296 | 0.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 109 | Cycle | Base Deletion | 35296 | 2.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 11 | Cycle | Base Substitution | 38794 | 61.42 | 28.00 | 27.71 | 0.29 | After |
| REGRESSION.HCC1395_tumor.L005 | 11 | Cycle | Base Insertion | 38794 | 0.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 11 | Cycle | Base Deletion | 38794 | 3.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 110 | Cycle | Base Substitution | 35496 | 74.06 | 27.00 | 26.82 | 0.18 | After |
| REGRESSION.HCC1395_tumor.L005 | 110 | Cycle | Base Insertion | 35165 | 3.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 110 | Cycle | Base Deletion | 35165 | 2.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 111 | Cycle | Base Substitution | 35359 | 68.82 | 27.00 | 26.69 | 0.31 | After |
| REGRESSION.HCC1395_tumor.L005 | 111 | Cycle | Base Insertion | 35019 | 0.57 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 111 | Cycle | Base Deletion | 35019 | 2.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 112 | Cycle | Base Substitution | 35170 | 61.31 | 27.00 | 26.73 | 0.27 | After |
| REGRESSION.HCC1395_tumor.L005 | 112 | Cycle | Base Insertion | 34814 | 0.73 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 112 | Cycle | Base Deletion | 34814 | 2.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 113 | Cycle | Base Substitution | 35222 | 73.66 | 27.00 | 26.58 | 0.42 | After |
| REGRESSION.HCC1395_tumor.L005 | 113 | Cycle | Base Insertion | 34873 | 0.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 113 | Cycle | Base Deletion | 34873 | 2.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 114 | Cycle | Base Substitution | 35140 | 69.45 | 27.00 | 26.68 | 0.32 | After |
| REGRESSION.HCC1395_tumor.L005 | 114 | Cycle | Base Insertion | 34796 | 1.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 114 | Cycle | Base Deletion | 34796 | 3.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 115 | Cycle | Base Substitution | 35141 | 58.24 | 27.00 | 26.89 | 0.11 | After |
| REGRESSION.HCC1395_tumor.L005 | 115 | Cycle | Base Insertion | 34796 | 0.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 115 | Cycle | Base Deletion | 34796 | 2.30 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 116 | Cycle | Base Substitution | 34925 | 79.92 | 26.00 | 26.58 | -0.58 | After |
| REGRESSION.HCC1395_tumor.L005 | 116 | Cycle | Base Insertion | 34593 | 1.95 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 116 | Cycle | Base Deletion | 34593 | 3.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 117 | Cycle | Base Substitution | 34897 | 65.29 | 27.00 | 26.71 | 0.29 | After |
| REGRESSION.HCC1395_tumor.L005 | 117 | Cycle | Base Insertion | 34565 | 0.88 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 117 | Cycle | Base Deletion | 34565 | 2.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 118 | Cycle | Base Substitution | 34761 | 66.63 | 27.00 | 26.63 | 0.37 | After |
| REGRESSION.HCC1395_tumor.L005 | 118 | Cycle | Base Insertion | 34416 | 0.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 118 | Cycle | Base Deletion | 34416 | 2.98 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 119 | Cycle | Base Substitution | 34700 | 86.96 | 26.00 | 26.10 | -0.10 | After |
| REGRESSION.HCC1395_tumor.L005 | 119 | Cycle | Base Insertion | 34376 | 1.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 119 | Cycle | Base Deletion | 34376 | 4.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 12 | Cycle | Base Substitution | 38688 | 56.63 | 28.00 | 27.45 | 0.55 | After |
| REGRESSION.HCC1395_tumor.L005 | 12 | Cycle | Base Insertion | 38688 | 3.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 12 | Cycle | Base Deletion | 38688 | 4.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 120 | Cycle | Base Substitution | 34583 | 77.44 | 26.00 | 26.42 | -0.42 | After |
| REGRESSION.HCC1395_tumor.L005 | 120 | Cycle | Base Insertion | 34274 | 1.84 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 120 | Cycle | Base Deletion | 34274 | 4.37 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 121 | Cycle | Base Substitution | 34570 | 67.48 | 27.00 | 26.72 | 0.28 | After |
| REGRESSION.HCC1395_tumor.L005 | 121 | Cycle | Base Insertion | 34238 | 1.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 121 | Cycle | Base Deletion | 34238 | 2.84 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 122 | Cycle | Base Substitution | 34511 | 66.84 | 27.00 | 26.56 | 0.44 | After |
| REGRESSION.HCC1395_tumor.L005 | 122 | Cycle | Base Insertion | 34181 | 3.57 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 122 | Cycle | Base Deletion | 34181 | 2.99 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 123 | Cycle | Base Substitution | 34366 | 76.06 | 27.00 | 26.56 | 0.44 | After |
| REGRESSION.HCC1395_tumor.L005 | 123 | Cycle | Base Insertion | 33988 | 0.85 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 123 | Cycle | Base Deletion | 33988 | 2.61 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 124 | Cycle | Base Substitution | 34383 | 78.15 | 26.00 | 26.63 | -0.63 | After |
| REGRESSION.HCC1395_tumor.L005 | 124 | Cycle | Base Insertion | 33991 | 1.10 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 124 | Cycle | Base Deletion | 33991 | 2.72 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 125 | Cycle | Base Substitution | 34207 | 61.21 | 27.00 | 26.81 | 0.19 | After |
| REGRESSION.HCC1395_tumor.L005 | 125 | Cycle | Base Insertion | 33826 | 1.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 125 | Cycle | Base Deletion | 33826 | 3.36 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 126 | Cycle | Base Substitution | 34139 | 72.29 | 27.00 | 26.42 | 0.58 | After |
| REGRESSION.HCC1395_tumor.L005 | 126 | Cycle | Base Insertion | 33761 | 1.64 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 126 | Cycle | Base Deletion | 33761 | 3.56 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 127 | Cycle | Base Substitution | 34145 | 82.79 | 26.00 | 26.56 | -0.56 | After |
| REGRESSION.HCC1395_tumor.L005 | 127 | Cycle | Base Insertion | 33760 | 2.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 127 | Cycle | Base Deletion | 33760 | 3.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 128 | Cycle | Base Substitution | 33955 | 83.23 | 26.00 | 26.57 | -0.57 | After |
| REGRESSION.HCC1395_tumor.L005 | 128 | Cycle | Base Insertion | 33581 | 0.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 128 | Cycle | Base Deletion | 33581 | 4.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 129 | Cycle | Base Substitution | 33872 | 89.73 | 26.00 | 26.56 | -0.56 | After |
| REGRESSION.HCC1395_tumor.L005 | 129 | Cycle | Base Insertion | 33477 | 2.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 129 | Cycle | Base Deletion | 33477 | 3.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 13 | Cycle | Base Substitution | 38648 | 41.20 | 29.00 | 27.51 | 1.49 | After |
| REGRESSION.HCC1395_tumor.L005 | 13 | Cycle | Base Insertion | 38648 | 2.44 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 13 | Cycle | Base Deletion | 38648 | 3.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 130 | Cycle | Base Substitution | 33740 | 63.53 | 27.00 | 26.55 | 0.45 | After |
| REGRESSION.HCC1395_tumor.L005 | 130 | Cycle | Base Insertion | 33354 | 0.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 130 | Cycle | Base Deletion | 33354 | 1.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 131 | Cycle | Base Substitution | 33627 | 59.18 | 27.00 | 26.48 | 0.52 | After |
| REGRESSION.HCC1395_tumor.L005 | 131 | Cycle | Base Insertion | 33240 | 1.86 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 131 | Cycle | Base Deletion | 33240 | 1.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 132 | Cycle | Base Substitution | 33576 | 76.67 | 26.00 | 26.49 | -0.49 | After |
| REGRESSION.HCC1395_tumor.L005 | 132 | Cycle | Base Insertion | 33193 | 1.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 132 | Cycle | Base Deletion | 33193 | 2.51 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 133 | Cycle | Base Substitution | 33459 | 62.86 | 27.00 | 26.71 | 0.29 | After |
| REGRESSION.HCC1395_tumor.L005 | 133 | Cycle | Base Insertion | 33078 | 1.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 133 | Cycle | Base Deletion | 33078 | 2.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 134 | Cycle | Base Substitution | 33370 | 67.83 | 27.00 | 26.74 | 0.26 | After |
| REGRESSION.HCC1395_tumor.L005 | 134 | Cycle | Base Insertion | 32972 | 1.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 134 | Cycle | Base Deletion | 32972 | 2.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 135 | Cycle | Base Substitution | 33337 | 53.61 | 27.00 | 26.61 | 0.39 | After |
| REGRESSION.HCC1395_tumor.L005 | 135 | Cycle | Base Insertion | 32946 | 0.82 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 135 | Cycle | Base Deletion | 32946 | 2.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 136 | Cycle | Base Substitution | 33242 | 67.64 | 27.00 | 26.48 | 0.52 | After |
| REGRESSION.HCC1395_tumor.L005 | 136 | Cycle | Base Insertion | 32840 | 0.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 136 | Cycle | Base Deletion | 32840 | 2.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 137 | Cycle | Base Substitution | 33081 | 59.40 | 27.00 | 26.53 | 0.47 | After |
| REGRESSION.HCC1395_tumor.L005 | 137 | Cycle | Base Insertion | 32682 | 0.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 137 | Cycle | Base Deletion | 32682 | 1.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 138 | Cycle | Base Substitution | 33044 | 68.06 | 27.00 | 26.63 | 0.37 | After |
| REGRESSION.HCC1395_tumor.L005 | 138 | Cycle | Base Insertion | 32642 | 0.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 138 | Cycle | Base Deletion | 32642 | 1.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 139 | Cycle | Base Substitution | 32989 | 74.39 | 26.00 | 26.52 | -0.52 | After |
| REGRESSION.HCC1395_tumor.L005 | 139 | Cycle | Base Insertion | 32557 | 0.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 139 | Cycle | Base Deletion | 32557 | 0.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 14 | Cycle | Base Substitution | 38750 | 44.12 | 29.00 | 27.58 | 1.42 | After |
| REGRESSION.HCC1395_tumor.L005 | 14 | Cycle | Base Insertion | 38750 | 1.95 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 14 | Cycle | Base Deletion | 38750 | 3.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 140 | Cycle | Base Substitution | 32845 | 76.13 | 26.00 | 26.60 | -0.60 | After |
| REGRESSION.HCC1395_tumor.L005 | 140 | Cycle | Base Insertion | 32422 | 0.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 140 | Cycle | Base Deletion | 32422 | 1.64 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 141 | Cycle | Base Substitution | 32718 | 82.85 | 26.00 | 25.93 | 0.07 | After |
| REGRESSION.HCC1395_tumor.L005 | 141 | Cycle | Base Insertion | 32293 | 0.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 141 | Cycle | Base Deletion | 32293 | 1.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 142 | Cycle | Base Substitution | 32594 | 76.90 | 26.00 | 26.56 | -0.56 | After |
| REGRESSION.HCC1395_tumor.L005 | 142 | Cycle | Base Insertion | 32164 | 0.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 142 | Cycle | Base Deletion | 32164 | 1.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 143 | Cycle | Base Substitution | 32541 | 68.94 | 27.00 | 26.46 | 0.54 | After |
| REGRESSION.HCC1395_tumor.L005 | 143 | Cycle | Base Insertion | 32103 | 0.10 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 143 | Cycle | Base Deletion | 32103 | 1.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 144 | Cycle | Base Substitution | 32353 | 67.49 | 27.00 | 26.32 | 0.68 | After |
| REGRESSION.HCC1395_tumor.L005 | 144 | Cycle | Base Insertion | 31889 | 0.10 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 144 | Cycle | Base Deletion | 31889 | 0.81 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 145 | Cycle | Base Substitution | 32331 | 65.57 | 27.00 | 26.47 | 0.53 | After |
| REGRESSION.HCC1395_tumor.L005 | 145 | Cycle | Base Insertion | 31861 | 0.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 145 | Cycle | Base Deletion | 31861 | 0.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 146 | Cycle | Base Substitution | 32250 | 71.16 | 27.00 | 26.52 | 0.48 | After |
| REGRESSION.HCC1395_tumor.L005 | 146 | Cycle | Base Insertion | 31811 | 0.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 146 | Cycle | Base Deletion | 31811 | 0.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 147 | Cycle | Base Substitution | 32116 | 77.63 | 26.00 | 26.62 | -0.62 | After |
| REGRESSION.HCC1395_tumor.L005 | 148 | Cycle | Base Substitution | 31938 | 73.37 | 26.00 | 26.43 | -0.43 | After |
| REGRESSION.HCC1395_tumor.L005 | 149 | Cycle | Base Substitution | 31834 | 73.18 | 26.00 | 26.37 | -0.37 | After |
| REGRESSION.HCC1395_tumor.L005 | 15 | Cycle | Base Substitution | 38639 | 39.13 | 29.00 | 27.69 | 1.31 | After |
| REGRESSION.HCC1395_tumor.L005 | 15 | Cycle | Base Insertion | 38639 | 1.26 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 15 | Cycle | Base Deletion | 38639 | 3.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 150 | Cycle | Base Substitution | 31758 | 63.73 | 27.00 | 26.37 | 0.63 | After |
| REGRESSION.HCC1395_tumor.L005 | 16 | Cycle | Base Substitution | 38664 | 33.93 | 29.00 | 28.66 | 0.34 | After |
| REGRESSION.HCC1395_tumor.L005 | 16 | Cycle | Base Insertion | 38664 | 1.47 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 16 | Cycle | Base Deletion | 38664 | 3.79 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 17 | Cycle | Base Substitution | 38726 | 27.35 | 30.00 | 28.77 | 1.23 | After |
| REGRESSION.HCC1395_tumor.L005 | 17 | Cycle | Base Insertion | 38726 | 1.36 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 17 | Cycle | Base Deletion | 38726 | 4.81 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 18 | Cycle | Base Substitution | 38634 | 26.91 | 30.00 | 28.57 | 1.43 | After |
| REGRESSION.HCC1395_tumor.L005 | 18 | Cycle | Base Insertion | 38634 | 1.37 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 18 | Cycle | Base Deletion | 38634 | 4.31 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 19 | Cycle | Base Substitution | 38718 | 20.87 | 30.00 | 28.54 | 1.46 | After |
| REGRESSION.HCC1395_tumor.L005 | 19 | Cycle | Base Insertion | 38718 | 2.29 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 19 | Cycle | Base Deletion | 38718 | 4.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 2 | Cycle | Base Substitution | 38861 | 90.34 | 26.00 | 26.91 | -0.91 | After |
| REGRESSION.HCC1395_tumor.L005 | 20 | Cycle | Base Substitution | 38663 | 26.92 | 30.00 | 28.58 | 1.42 | After |
| REGRESSION.HCC1395_tumor.L005 | 20 | Cycle | Base Insertion | 38663 | 1.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 20 | Cycle | Base Deletion | 38663 | 3.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 21 | Cycle | Base Substitution | 38558 | 35.01 | 29.00 | 28.73 | 0.27 | After |
| REGRESSION.HCC1395_tumor.L005 | 21 | Cycle | Base Insertion | 38558 | 2.57 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 21 | Cycle | Base Deletion | 38558 | 3.77 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 22 | Cycle | Base Substitution | 38630 | 26.04 | 30.00 | 29.27 | 0.73 | After |
| REGRESSION.HCC1395_tumor.L005 | 22 | Cycle | Base Insertion | 38630 | 1.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 22 | Cycle | Base Deletion | 38630 | 3.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 23 | Cycle | Base Substitution | 38608 | 34.23 | 29.00 | 28.58 | 0.42 | After |
| REGRESSION.HCC1395_tumor.L005 | 23 | Cycle | Base Insertion | 38608 | 1.17 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 23 | Cycle | Base Deletion | 38608 | 4.02 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 24 | Cycle | Base Substitution | 38491 | 34.01 | 29.00 | 28.73 | 0.27 | After |
| REGRESSION.HCC1395_tumor.L005 | 24 | Cycle | Base Insertion | 38491 | 1.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 24 | Cycle | Base Deletion | 38491 | 5.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 25 | Cycle | Base Substitution | 38625 | 16.47 | 30.00 | 28.63 | 1.37 | After |
| REGRESSION.HCC1395_tumor.L005 | 25 | Cycle | Base Insertion | 38625 | 1.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 25 | Cycle | Base Deletion | 38625 | 5.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 26 | Cycle | Base Substitution | 38622 | 35.15 | 29.00 | 27.75 | 1.25 | After |
| REGRESSION.HCC1395_tumor.L005 | 26 | Cycle | Base Insertion | 38622 | 1.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 26 | Cycle | Base Deletion | 38622 | 4.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 27 | Cycle | Base Substitution | 38427 | 37.93 | 29.00 | 27.79 | 1.21 | After |
| REGRESSION.HCC1395_tumor.L005 | 27 | Cycle | Base Insertion | 38426 | 1.51 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 27 | Cycle | Base Deletion | 38426 | 5.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 28 | Cycle | Base Substitution | 38534 | 42.38 | 29.00 | 27.61 | 1.39 | After |
| REGRESSION.HCC1395_tumor.L005 | 28 | Cycle | Base Insertion | 38534 | 2.51 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 28 | Cycle | Base Deletion | 38534 | 3.86 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 29 | Cycle | Base Substitution | 38447 | 43.65 | 29.00 | 27.98 | 1.02 | After |
| REGRESSION.HCC1395_tumor.L005 | 29 | Cycle | Base Insertion | 38446 | 2.29 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 29 | Cycle | Base Deletion | 38446 | 3.98 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 3 | Cycle | Base Substitution | 38949 | 114.19 | 26.00 | 27.24 | -1.24 | After |
| REGRESSION.HCC1395_tumor.L005 | 30 | Cycle | Base Substitution | 38462 | 43.79 | 29.00 | 28.00 | 1.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 30 | Cycle | Base Insertion | 38461 | 2.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 30 | Cycle | Base Deletion | 38461 | 4.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 31 | Cycle | Base Substitution | 38558 | 44.10 | 29.00 | 27.81 | 1.19 | After |
| REGRESSION.HCC1395_tumor.L005 | 31 | Cycle | Base Insertion | 38558 | 2.07 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 31 | Cycle | Base Deletion | 38558 | 3.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 32 | Cycle | Base Substitution | 38377 | 66.32 | 28.00 | 27.84 | 0.16 | After |
| REGRESSION.HCC1395_tumor.L005 | 32 | Cycle | Base Insertion | 38377 | 2.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 32 | Cycle | Base Deletion | 38377 | 3.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 33 | Cycle | Base Substitution | 38396 | 34.62 | 29.00 | 27.98 | 1.02 | After |
| REGRESSION.HCC1395_tumor.L005 | 33 | Cycle | Base Insertion | 38395 | 4.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 33 | Cycle | Base Deletion | 38395 | 3.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 34 | Cycle | Base Substitution | 38478 | 45.32 | 28.00 | 27.60 | 0.40 | After |
| REGRESSION.HCC1395_tumor.L005 | 34 | Cycle | Base Insertion | 38475 | 2.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 34 | Cycle | Base Deletion | 38475 | 3.57 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 35 | Cycle | Base Substitution | 38531 | 34.34 | 29.00 | 27.68 | 1.32 | After |
| REGRESSION.HCC1395_tumor.L005 | 35 | Cycle | Base Insertion | 38527 | 1.85 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 35 | Cycle | Base Deletion | 38527 | 4.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 36 | Cycle | Base Substitution | 38547 | 57.24 | 28.00 | 27.68 | 0.32 | After |
| REGRESSION.HCC1395_tumor.L005 | 36 | Cycle | Base Insertion | 38542 | 3.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 36 | Cycle | Base Deletion | 38542 | 3.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 37 | Cycle | Base Substitution | 38462 | 39.22 | 29.00 | 28.08 | 0.92 | After |
| REGRESSION.HCC1395_tumor.L005 | 37 | Cycle | Base Insertion | 38458 | 2.42 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 37 | Cycle | Base Deletion | 38458 | 3.72 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 38 | Cycle | Base Substitution | 38349 | 52.37 | 28.00 | 27.90 | 0.10 | After |
| REGRESSION.HCC1395_tumor.L005 | 38 | Cycle | Base Insertion | 38348 | 2.46 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 38 | Cycle | Base Deletion | 38348 | 4.86 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 39 | Cycle | Base Substitution | 38343 | 34.68 | 29.00 | 27.99 | 1.01 | After |
| REGRESSION.HCC1395_tumor.L005 | 39 | Cycle | Base Insertion | 38343 | 2.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 39 | Cycle | Base Deletion | 38343 | 4.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 4 | Cycle | Base Substitution | 38809 | 53.66 | 28.00 | 27.08 | 0.92 | After |
| REGRESSION.HCC1395_tumor.L005 | 40 | Cycle | Base Substitution | 38317 | 37.35 | 29.00 | 27.93 | 1.07 | After |
| REGRESSION.HCC1395_tumor.L005 | 40 | Cycle | Base Insertion | 38315 | 1.77 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 40 | Cycle | Base Deletion | 38315 | 5.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 41 | Cycle | Base Substitution | 38327 | 46.60 | 28.00 | 27.72 | 0.28 | After |
| REGRESSION.HCC1395_tumor.L005 | 41 | Cycle | Base Insertion | 38323 | 1.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 41 | Cycle | Base Deletion | 38323 | 5.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 42 | Cycle | Base Substitution | 38331 | 40.48 | 29.00 | 27.99 | 1.01 | After |
| REGRESSION.HCC1395_tumor.L005 | 42 | Cycle | Base Insertion | 38324 | 1.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 42 | Cycle | Base Deletion | 38324 | 5.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 43 | Cycle | Base Substitution | 38468 | 37.64 | 29.00 | 27.83 | 1.17 | After |
| REGRESSION.HCC1395_tumor.L005 | 43 | Cycle | Base Insertion | 38460 | 1.42 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 43 | Cycle | Base Deletion | 38460 | 4.82 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 44 | Cycle | Base Substitution | 38359 | 51.36 | 28.00 | 27.77 | 0.23 | After |
| REGRESSION.HCC1395_tumor.L005 | 44 | Cycle | Base Insertion | 38349 | 2.02 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 44 | Cycle | Base Deletion | 38349 | 4.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 45 | Cycle | Base Substitution | 38271 | 49.15 | 28.00 | 27.94 | 0.06 | After |
| REGRESSION.HCC1395_tumor.L005 | 45 | Cycle | Base Insertion | 38260 | 2.73 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 45 | Cycle | Base Deletion | 38260 | 4.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 46 | Cycle | Base Substitution | 38379 | 33.57 | 29.00 | 28.29 | 0.71 | After |
| REGRESSION.HCC1395_tumor.L005 | 46 | Cycle | Base Insertion | 38369 | 1.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 46 | Cycle | Base Deletion | 38369 | 3.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 47 | Cycle | Base Substitution | 38324 | 42.34 | 29.00 | 27.82 | 1.18 | After |
| REGRESSION.HCC1395_tumor.L005 | 47 | Cycle | Base Insertion | 38311 | 2.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 47 | Cycle | Base Deletion | 38311 | 3.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 48 | Cycle | Base Substitution | 38326 | 38.06 | 29.00 | 27.79 | 1.21 | After |
| REGRESSION.HCC1395_tumor.L005 | 48 | Cycle | Base Insertion | 38312 | 2.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 48 | Cycle | Base Deletion | 38312 | 3.51 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 49 | Cycle | Base Substitution | 38232 | 42.79 | 29.00 | 27.68 | 1.32 | After |
| REGRESSION.HCC1395_tumor.L005 | 49 | Cycle | Base Insertion | 38217 | 1.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 49 | Cycle | Base Deletion | 38217 | 3.79 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 5 | Cycle | Base Substitution | 38815 | 50.21 | 28.00 | 27.72 | 0.28 | After |
| REGRESSION.HCC1395_tumor.L005 | 5 | Cycle | Base Insertion | 38815 | 1.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 5 | Cycle | Base Deletion | 38815 | 1.29 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 50 | Cycle | Base Substitution | 38329 | 40.94 | 29.00 | 27.57 | 1.43 | After |
| REGRESSION.HCC1395_tumor.L005 | 50 | Cycle | Base Insertion | 38307 | 1.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 50 | Cycle | Base Deletion | 38307 | 4.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 51 | Cycle | Base Substitution | 38341 | 45.18 | 28.00 | 27.89 | 0.11 | After |
| REGRESSION.HCC1395_tumor.L005 | 51 | Cycle | Base Insertion | 38317 | 1.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 51 | Cycle | Base Deletion | 38317 | 4.72 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 52 | Cycle | Base Substitution | 38352 | 44.68 | 28.00 | 27.77 | 0.23 | After |
| REGRESSION.HCC1395_tumor.L005 | 52 | Cycle | Base Insertion | 38329 | 1.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 52 | Cycle | Base Deletion | 38329 | 3.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 53 | Cycle | Base Substitution | 38288 | 44.87 | 28.00 | 27.83 | 0.17 | After |
| REGRESSION.HCC1395_tumor.L005 | 53 | Cycle | Base Insertion | 38258 | 1.17 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 53 | Cycle | Base Deletion | 38258 | 4.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 54 | Cycle | Base Substitution | 38192 | 37.26 | 29.00 | 27.73 | 1.27 | After |
| REGRESSION.HCC1395_tumor.L005 | 54 | Cycle | Base Insertion | 38155 | 1.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 54 | Cycle | Base Deletion | 38155 | 3.29 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 55 | Cycle | Base Substitution | 38303 | 43.73 | 29.00 | 27.84 | 1.16 | After |
| REGRESSION.HCC1395_tumor.L005 | 55 | Cycle | Base Insertion | 38262 | 1.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 55 | Cycle | Base Deletion | 38262 | 2.98 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 56 | Cycle | Base Substitution | 38135 | 43.46 | 29.00 | 27.95 | 1.05 | After |
| REGRESSION.HCC1395_tumor.L005 | 56 | Cycle | Base Insertion | 38094 | 1.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 56 | Cycle | Base Deletion | 38094 | 2.56 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 57 | Cycle | Base Substitution | 38171 | 67.03 | 28.00 | 27.89 | 0.11 | After |
| REGRESSION.HCC1395_tumor.L005 | 57 | Cycle | Base Insertion | 38134 | 2.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 57 | Cycle | Base Deletion | 38134 | 2.96 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 58 | Cycle | Base Substitution | 38189 | 51.69 | 28.00 | 27.67 | 0.33 | After |
| REGRESSION.HCC1395_tumor.L005 | 58 | Cycle | Base Insertion | 38152 | 1.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 58 | Cycle | Base Deletion | 38152 | 3.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 59 | Cycle | Base Substitution | 38174 | 42.69 | 29.00 | 27.53 | 1.47 | After |
| REGRESSION.HCC1395_tumor.L005 | 59 | Cycle | Base Insertion | 38128 | 2.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 59 | Cycle | Base Deletion | 38128 | 3.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 6 | Cycle | Base Substitution | 38773 | 37.29 | 29.00 | 27.60 | 1.40 | After |
| REGRESSION.HCC1395_tumor.L005 | 6 | Cycle | Base Insertion | 38773 | 1.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 6 | Cycle | Base Deletion | 38773 | 1.72 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 60 | Cycle | Base Substitution | 38236 | 45.61 | 28.00 | 27.47 | 0.53 | After |
| REGRESSION.HCC1395_tumor.L005 | 60 | Cycle | Base Insertion | 38184 | 2.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 60 | Cycle | Base Deletion | 38184 | 4.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 61 | Cycle | Base Substitution | 38161 | 40.07 | 29.00 | 27.77 | 1.23 | After |
| REGRESSION.HCC1395_tumor.L005 | 61 | Cycle | Base Insertion | 38095 | 2.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 61 | Cycle | Base Deletion | 38095 | 3.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 62 | Cycle | Base Substitution | 38081 | 53.10 | 28.00 | 27.60 | 0.40 | After |
| REGRESSION.HCC1395_tumor.L005 | 62 | Cycle | Base Insertion | 38013 | 2.31 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 62 | Cycle | Base Deletion | 38013 | 3.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 63 | Cycle | Base Substitution | 38180 | 60.75 | 28.00 | 27.45 | 0.55 | After |
| REGRESSION.HCC1395_tumor.L005 | 63 | Cycle | Base Insertion | 38104 | 1.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 63 | Cycle | Base Deletion | 38104 | 3.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 64 | Cycle | Base Substitution | 38095 | 56.62 | 28.00 | 27.50 | 0.50 | After |
| REGRESSION.HCC1395_tumor.L005 | 64 | Cycle | Base Insertion | 38025 | 2.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 64 | Cycle | Base Deletion | 38025 | 3.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 65 | Cycle | Base Substitution | 38026 | 52.25 | 28.00 | 27.54 | 0.46 | After |
| REGRESSION.HCC1395_tumor.L005 | 65 | Cycle | Base Insertion | 37951 | 1.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 65 | Cycle | Base Deletion | 37951 | 3.09 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 66 | Cycle | Base Substitution | 38101 | 37.61 | 29.00 | 27.55 | 1.45 | After |
| REGRESSION.HCC1395_tumor.L005 | 66 | Cycle | Base Insertion | 38021 | 2.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 66 | Cycle | Base Deletion | 38021 | 3.79 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 67 | Cycle | Base Substitution | 38047 | 50.53 | 28.00 | 27.62 | 0.38 | After |
| REGRESSION.HCC1395_tumor.L005 | 67 | Cycle | Base Insertion | 37964 | 1.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 67 | Cycle | Base Deletion | 37964 | 3.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 68 | Cycle | Base Substitution | 38025 | 47.91 | 28.00 | 27.46 | 0.54 | After |
| REGRESSION.HCC1395_tumor.L005 | 68 | Cycle | Base Insertion | 37932 | 1.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 68 | Cycle | Base Deletion | 37932 | 3.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 69 | Cycle | Base Substitution | 38020 | 50.48 | 28.00 | 27.80 | 0.20 | After |
| REGRESSION.HCC1395_tumor.L005 | 69 | Cycle | Base Insertion | 37923 | 1.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 69 | Cycle | Base Deletion | 37923 | 3.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 7 | Cycle | Base Substitution | 38793 | 40.98 | 29.00 | 27.48 | 1.52 | After |
| REGRESSION.HCC1395_tumor.L005 | 7 | Cycle | Base Insertion | 38793 | 1.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 7 | Cycle | Base Deletion | 38793 | 1.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 70 | Cycle | Base Substitution | 37934 | 46.13 | 28.00 | 27.34 | 0.66 | After |
| REGRESSION.HCC1395_tumor.L005 | 70 | Cycle | Base Insertion | 37818 | 1.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 70 | Cycle | Base Deletion | 37818 | 4.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 71 | Cycle | Base Substitution | 37889 | 57.32 | 28.00 | 27.55 | 0.45 | After |
| REGRESSION.HCC1395_tumor.L005 | 71 | Cycle | Base Insertion | 37769 | 1.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 71 | Cycle | Base Deletion | 37769 | 4.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 72 | Cycle | Base Substitution | 37853 | 58.20 | 28.00 | 27.47 | 0.53 | After |
| REGRESSION.HCC1395_tumor.L005 | 72 | Cycle | Base Insertion | 37730 | 1.57 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 72 | Cycle | Base Deletion | 37730 | 3.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 73 | Cycle | Base Substitution | 37800 | 73.27 | 27.00 | 27.20 | -0.20 | After |
| REGRESSION.HCC1395_tumor.L005 | 73 | Cycle | Base Insertion | 37662 | 1.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 73 | Cycle | Base Deletion | 37662 | 3.85 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 74 | Cycle | Base Substitution | 37881 | 54.47 | 28.00 | 27.33 | 0.67 | After |
| REGRESSION.HCC1395_tumor.L005 | 74 | Cycle | Base Insertion | 37743 | 1.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 74 | Cycle | Base Deletion | 37743 | 5.57 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 75 | Cycle | Base Substitution | 37833 | 55.67 | 28.00 | 27.89 | 0.11 | After |
| REGRESSION.HCC1395_tumor.L005 | 75 | Cycle | Base Insertion | 37687 | 1.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 75 | Cycle | Base Deletion | 37687 | 3.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 76 | Cycle | Base Substitution | 37775 | 52.72 | 28.00 | 27.49 | 0.51 | After |
| REGRESSION.HCC1395_tumor.L005 | 76 | Cycle | Base Insertion | 37614 | 1.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 76 | Cycle | Base Deletion | 37614 | 3.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 77 | Cycle | Base Substitution | 37621 | 65.42 | 28.00 | 27.40 | 0.60 | After |
| REGRESSION.HCC1395_tumor.L005 | 77 | Cycle | Base Insertion | 37458 | 1.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 77 | Cycle | Base Deletion | 37458 | 4.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 78 | Cycle | Base Substitution | 37639 | 57.21 | 28.00 | 27.40 | 0.60 | After |
| REGRESSION.HCC1395_tumor.L005 | 78 | Cycle | Base Insertion | 37469 | 1.95 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 78 | Cycle | Base Deletion | 37469 | 4.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 79 | Cycle | Base Substitution | 37587 | 67.04 | 27.00 | 27.34 | -0.34 | After |
| REGRESSION.HCC1395_tumor.L005 | 79 | Cycle | Base Insertion | 37397 | 1.61 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 79 | Cycle | Base Deletion | 37397 | 4.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 8 | Cycle | Base Substitution | 38895 | 53.07 | 28.00 | 27.65 | 0.35 | After |
| REGRESSION.HCC1395_tumor.L005 | 8 | Cycle | Base Insertion | 38895 | 1.30 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 8 | Cycle | Base Deletion | 38895 | 3.30 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 80 | Cycle | Base Substitution | 37544 | 52.05 | 28.00 | 27.37 | 0.63 | After |
| REGRESSION.HCC1395_tumor.L005 | 80 | Cycle | Base Insertion | 37362 | 1.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 80 | Cycle | Base Deletion | 37362 | 4.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 81 | Cycle | Base Substitution | 37499 | 46.75 | 28.00 | 27.71 | 0.29 | After |
| REGRESSION.HCC1395_tumor.L005 | 81 | Cycle | Base Insertion | 37307 | 2.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 81 | Cycle | Base Deletion | 37307 | 4.18 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 82 | Cycle | Base Substitution | 37425 | 60.69 | 28.00 | 27.20 | 0.80 | After |
| REGRESSION.HCC1395_tumor.L005 | 82 | Cycle | Base Insertion | 37229 | 1.36 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 82 | Cycle | Base Deletion | 37229 | 4.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 83 | Cycle | Base Substitution | 37280 | 58.11 | 28.00 | 27.26 | 0.74 | After |
| REGRESSION.HCC1395_tumor.L005 | 83 | Cycle | Base Insertion | 37070 | 1.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 83 | Cycle | Base Deletion | 37070 | 4.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 84 | Cycle | Base Substitution | 37459 | 80.70 | 27.00 | 26.99 | 0.01 | After |
| REGRESSION.HCC1395_tumor.L005 | 84 | Cycle | Base Insertion | 37231 | 1.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 84 | Cycle | Base Deletion | 37231 | 3.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 85 | Cycle | Base Substitution | 37283 | 62.18 | 27.00 | 27.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 85 | Cycle | Base Insertion | 37057 | 1.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 85 | Cycle | Base Deletion | 37057 | 3.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 86 | Cycle | Base Substitution | 37176 | 62.10 | 28.00 | 27.06 | 0.94 | After |
| REGRESSION.HCC1395_tumor.L005 | 86 | Cycle | Base Insertion | 36948 | 1.61 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 86 | Cycle | Base Deletion | 36948 | 2.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 87 | Cycle | Base Substitution | 37368 | 49.51 | 28.00 | 27.22 | 0.78 | After |
| REGRESSION.HCC1395_tumor.L005 | 87 | Cycle | Base Insertion | 37125 | 1.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 87 | Cycle | Base Deletion | 37125 | 2.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 88 | Cycle | Base Substitution | 37095 | 72.24 | 27.00 | 27.06 | -0.06 | After |
| REGRESSION.HCC1395_tumor.L005 | 88 | Cycle | Base Insertion | 36844 | 1.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 88 | Cycle | Base Deletion | 36844 | 3.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 89 | Cycle | Base Substitution | 37205 | 68.82 | 27.00 | 27.05 | -0.05 | After |
| REGRESSION.HCC1395_tumor.L005 | 89 | Cycle | Base Insertion | 36959 | 2.73 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 89 | Cycle | Base Deletion | 36959 | 3.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 9 | Cycle | Base Substitution | 38719 | 39.60 | 29.00 | 27.80 | 1.20 | After |
| REGRESSION.HCC1395_tumor.L005 | 9 | Cycle | Base Insertion | 38719 | 1.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 9 | Cycle | Base Deletion | 38719 | 2.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 90 | Cycle | Base Substitution | 37168 | 73.56 | 27.00 | 26.58 | 0.42 | After |
| REGRESSION.HCC1395_tumor.L005 | 90 | Cycle | Base Insertion | 36901 | 1.55 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 90 | Cycle | Base Deletion | 36901 | 2.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 91 | Cycle | Base Substitution | 36965 | 57.86 | 28.00 | 27.10 | 0.90 | After |
| REGRESSION.HCC1395_tumor.L005 | 91 | Cycle | Base Insertion | 36694 | 0.98 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 91 | Cycle | Base Deletion | 36694 | 2.99 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 92 | Cycle | Base Substitution | 36873 | 56.16 | 28.00 | 27.16 | 0.84 | After |
| REGRESSION.HCC1395_tumor.L005 | 92 | Cycle | Base Insertion | 36593 | 1.55 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 92 | Cycle | Base Deletion | 36593 | 3.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 93 | Cycle | Base Substitution | 36722 | 56.07 | 27.00 | 26.94 | 0.06 | After |
| REGRESSION.HCC1395_tumor.L005 | 93 | Cycle | Base Insertion | 36441 | 1.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 93 | Cycle | Base Deletion | 36441 | 4.55 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 94 | Cycle | Base Substitution | 36833 | 48.48 | 28.00 | 26.99 | 1.01 | After |
| REGRESSION.HCC1395_tumor.L005 | 94 | Cycle | Base Insertion | 36528 | 2.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 94 | Cycle | Base Deletion | 36528 | 3.95 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 95 | Cycle | Base Substitution | 36699 | 69.96 | 27.00 | 27.02 | -0.02 | After |
| REGRESSION.HCC1395_tumor.L005 | 95 | Cycle | Base Insertion | 36390 | 2.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 95 | Cycle | Base Deletion | 36390 | 3.81 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 96 | Cycle | Base Substitution | 36517 | 57.23 | 27.00 | 26.97 | 0.03 | After |
| REGRESSION.HCC1395_tumor.L005 | 96 | Cycle | Base Insertion | 36199 | 1.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 96 | Cycle | Base Deletion | 36199 | 4.17 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 97 | Cycle | Base Substitution | 36499 | 67.43 | 27.00 | 26.85 | 0.15 | After |
| REGRESSION.HCC1395_tumor.L005 | 97 | Cycle | Base Insertion | 36192 | 1.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 97 | Cycle | Base Deletion | 36192 | 3.61 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 98 | Cycle | Base Substitution | 36385 | 69.35 | 27.00 | 27.22 | -0.22 | After |
| REGRESSION.HCC1395_tumor.L005 | 98 | Cycle | Base Insertion | 36068 | 2.96 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 98 | Cycle | Base Deletion | 36068 | 3.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 99 | Cycle | Base Substitution | 36419 | 63.15 | 28.00 | 27.17 | 0.83 | After |
| REGRESSION.HCC1395_tumor.L005 | 99 | Cycle | Base Insertion | 36097 | 1.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 99 | Cycle | Base Deletion | 36097 | 3.29 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 10 | QualityScore | Base Substitution | 25005 | 2646.70 | 10.00 | 10.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 11 | QualityScore | Base Substitution | 14821 | 1072.82 | 11.00 | 11.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 12 | QualityScore | Base Substitution | 21365 | 1193.01 | 13.00 | 12.00 | 1.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 13 | QualityScore | Base Substitution | 11534 | 236.56 | 16.00 | 13.00 | 3.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 14 | QualityScore | Base Substitution | 12177 | 184.01 | 17.00 | 14.00 | 3.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 15 | QualityScore | Base Substitution | 16792 | 8.77 | 21.00 | 15.00 | 6.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 16 | QualityScore | Base Substitution | 8148 | 1.95 | 20.00 | 16.00 | 4.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 17 | QualityScore | Base Substitution | 14454 | 2.87 | 22.00 | 17.00 | 5.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 21 | QualityScore | Base Substitution | 114 | 0.00 | 21.00 | 21.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 22 | QualityScore | Base Substitution | 30880 | 222.35 | 22.00 | 22.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 23 | QualityScore | Base Substitution | 69207 | 442.02 | 22.00 | 23.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 24 | QualityScore | Base Substitution | 119091 | 435.64 | 24.00 | 24.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 25 | QualityScore | Base Substitution | 121617 | 209.09 | 27.00 | 25.00 | 2.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 28 | QualityScore | Base Substitution | 7605 | 4.55 | 28.00 | 28.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 29 | QualityScore | Base Substitution | 68303 | 89.32 | 29.00 | 29.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 30 | QualityScore | Base Substitution | 2574779 | 1581.06 | 32.00 | 30.00 | 2.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 31 | QualityScore | Base Substitution | 2869525 | 1273.29 | 33.00 | 31.00 | 2.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 32 | QualityScore | Base Substitution | 4719293 | 1085.37 | 36.00 | 32.00 | 4.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 33 | QualityScore | Base Substitution | 222395 | 39.85 | 35.00 | 33.00 | 2.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 45 | QualityScore | Base Insertion | 10982285 | 440.65 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 45 | QualityScore | Base Deletion | 10982285 | 941.02 | 41.00 | 45.00 | -4.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 8 | QualityScore | Base Substitution | 1911 | 357.18 | 7.00 | 8.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L005 | 9 | QualityScore | Base Substitution | 53269 | 7386.56 | 9.00 | 9.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | AA | Context | Base Substitution | 828292 | 1890.90 | 26.00 | 24.98 | 1.02 | After |
| REGRESSION.HCC1395_tumor.L006 | AAA | Context | Base Insertion | 294472 | 70.68 | 42.00 | 45.00 | -3.00 | After |
| REGRESSION.HCC1395_tumor.L006 | AAA | Context | Base Deletion | 294472 | 204.26 | 37.00 | 45.00 | -8.00 | After |
| REGRESSION.HCC1395_tumor.L006 | AAC | Context | Base Insertion | 130733 | 5.17 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | AAC | Context | Base Deletion | 130733 | 8.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | AAG | Context | Base Insertion | 195794 | 8.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | AAG | Context | Base Deletion | 195794 | 10.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | AAT | Context | Base Insertion | 172592 | 2.48 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | AAT | Context | Base Deletion | 172592 | 15.44 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L006 | AC | Context | Base Substitution | 525272 | 1772.15 | 25.00 | 24.79 | 0.21 | After |
| REGRESSION.HCC1395_tumor.L006 | ACA | Context | Base Insertion | 202998 | 19.75 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L006 | ACA | Context | Base Deletion | 202998 | 34.56 | 43.00 | 45.00 | -2.00 | After |
| REGRESSION.HCC1395_tumor.L006 | ACC | Context | Base Insertion | 144547 | 8.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | ACC | Context | Base Deletion | 144547 | 5.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | ACG | Context | Base Insertion | 30173 | 0.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | ACG | Context | Base Deletion | 30173 | 3.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | ACT | Context | Base Insertion | 156444 | 1.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | ACT | Context | Base Deletion | 156444 | 11.07 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | AG | Context | Base Substitution | 791784 | 609.85 | 31.00 | 28.77 | 2.23 | After |
| REGRESSION.HCC1395_tumor.L006 | AGA | Context | Base Insertion | 220346 | 6.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | AGA | Context | Base Deletion | 220346 | 10.73 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | AGC | Context | Base Insertion | 190000 | 1.29 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | AGC | Context | Base Deletion | 190000 | 8.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | AGG | Context | Base Insertion | 224703 | 11.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | AGG | Context | Base Deletion | 224703 | 9.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | AGT | Context | Base Insertion | 153268 | 3.55 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | AGT | Context | Base Deletion | 153268 | 4.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | AT | Context | Base Substitution | 597545 | 620.77 | 30.00 | 27.66 | 2.34 | After |
| REGRESSION.HCC1395_tumor.L006 | ATA | Context | Base Insertion | 134351 | 6.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | ATA | Context | Base Deletion | 134351 | 5.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | ATC | Context | Base Insertion | 119988 | 1.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | ATC | Context | Base Deletion | 119988 | 9.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | ATG | Context | Base Insertion | 173298 | 2.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | ATG | Context | Base Deletion | 173298 | 1.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | ATT | Context | Base Insertion | 180446 | 2.47 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | ATT | Context | Base Deletion | 180446 | 7.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | CA | Context | Base Substitution | 847786 | 1832.74 | 27.00 | 26.49 | 0.51 | After |
| REGRESSION.HCC1395_tumor.L006 | CAA | Context | Base Insertion | 170330 | 6.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | CAA | Context | Base Deletion | 170330 | 11.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | CAC | Context | Base Insertion | 181741 | 20.69 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L006 | CAC | Context | Base Deletion | 181741 | 32.39 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L006 | CAG | Context | Base Insertion | 289025 | 8.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | CAG | Context | Base Deletion | 289025 | 11.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | CAT | Context | Base Insertion | 168738 | 3.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | CAT | Context | Base Deletion | 168738 | 4.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | CC | Context | Base Substitution | 753152 | 2295.16 | 25.00 | 24.67 | 0.33 | After |
| REGRESSION.HCC1395_tumor.L006 | CCA | Context | Base Insertion | 242258 | 5.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | CCA | Context | Base Deletion | 242258 | 7.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | CCC | Context | Base Insertion | 208506 | 11.81 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | CCC | Context | Base Deletion | 208506 | 14.79 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | CCG | Context | Base Insertion | 53658 | 1.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | CCG | Context | Base Deletion | 53658 | 5.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | CCT | Context | Base Insertion | 239280 | 2.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | CCT | Context | Base Deletion | 239280 | 11.38 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | CG | Context | Base Substitution | 159307 | 515.99 | 25.00 | 24.78 | 0.22 | After |
| REGRESSION.HCC1395_tumor.L006 | CGA | Context | Base Insertion | 55467 | 0.21 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | CGA | Context | Base Deletion | 55467 | 0.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | CGC | Context | Base Insertion | 79362 | 1.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | CGC | Context | Base Deletion | 79362 | 7.02 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | CGG | Context | Base Insertion | 96682 | 2.38 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | CGG | Context | Base Deletion | 96682 | 7.94 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | CGT | Context | Base Insertion | 61794 | 1.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | CGT | Context | Base Deletion | 61794 | 3.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | CT | Context | Base Substitution | 827859 | 411.26 | 33.00 | 29.45 | 3.55 | After |
| REGRESSION.HCC1395_tumor.L006 | CTA | Context | Base Insertion | 95543 | 0.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | CTA | Context | Base Deletion | 95543 | 6.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | CTC | Context | Base Insertion | 199445 | 5.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | CTC | Context | Base Deletion | 199445 | 18.22 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L006 | CTG | Context | Base Insertion | 287900 | 2.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | CTG | Context | Base Deletion | 287900 | 14.46 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | CTT | Context | Base Insertion | 207243 | 8.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | CTT | Context | Base Deletion | 207243 | 9.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | GA | Context | Base Substitution | 695856 | 1050.59 | 28.00 | 26.55 | 1.45 | After |
| REGRESSION.HCC1395_tumor.L006 | GAA | Context | Base Insertion | 207682 | 5.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | GAA | Context | Base Deletion | 207682 | 8.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | GAC | Context | Base Insertion | 117299 | 4.44 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | GAC | Context | Base Deletion | 117299 | 5.21 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | GAG | Context | Base Insertion | 205150 | 2.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | GAG | Context | Base Deletion | 205150 | 10.36 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | GAT | Context | Base Insertion | 124210 | 2.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | GAT | Context | Base Deletion | 124210 | 2.86 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | GC | Context | Base Substitution | 654183 | 1430.05 | 27.00 | 25.94 | 1.06 | After |
| REGRESSION.HCC1395_tumor.L006 | GCA | Context | Base Insertion | 202515 | 5.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | GCA | Context | Base Deletion | 202515 | 3.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | GCC | Context | Base Insertion | 196392 | 3.48 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | GCC | Context | Base Deletion | 196392 | 10.55 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | GCG | Context | Base Insertion | 48494 | 1.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | GCG | Context | Base Deletion | 48494 | 5.51 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | GCT | Context | Base Insertion | 205887 | 3.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | GCT | Context | Base Deletion | 205887 | 4.77 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | GG | Context | Base Substitution | 780844 | 714.10 | 30.00 | 27.75 | 2.25 | After |
| REGRESSION.HCC1395_tumor.L006 | GGA | Context | Base Insertion | 212419 | 28.18 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L006 | GGA | Context | Base Deletion | 212419 | 12.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | GGC | Context | Base Insertion | 193536 | 2.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | GGC | Context | Base Deletion | 193536 | 6.82 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | GGG | Context | Base Insertion | 216113 | 14.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | GGG | Context | Base Deletion | 216113 | 28.13 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L006 | GGT | Context | Base Insertion | 156319 | 3.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | GGT | Context | Base Deletion | 156319 | 4.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | GT | Context | Base Substitution | 582596 | 1017.10 | 28.00 | 26.95 | 1.05 | After |
| REGRESSION.HCC1395_tumor.L006 | GTA | Context | Base Insertion | 100035 | 2.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | GTA | Context | Base Deletion | 100035 | 1.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | GTC | Context | Base Insertion | 125442 | 2.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | GTC | Context | Base Deletion | 125442 | 4.29 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | GTG | Context | Base Insertion | 196882 | 14.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | GTG | Context | Base Deletion | 196882 | 33.38 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L006 | GTT | Context | Base Insertion | 147483 | 4.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | GTT | Context | Base Deletion | 147483 | 11.98 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | TA | Context | Base Substitution | 479623 | 1149.46 | 26.00 | 25.10 | 0.90 | After |
| REGRESSION.HCC1395_tumor.L006 | TAA | Context | Base Insertion | 148750 | 6.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | TAA | Context | Base Deletion | 148750 | 13.98 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L006 | TAC | Context | Base Insertion | 92141 | 1.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | TAC | Context | Base Deletion | 92141 | 4.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | TAG | Context | Base Insertion | 95665 | 1.42 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | TAG | Context | Base Deletion | 95665 | 1.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | TAT | Context | Base Insertion | 127690 | 0.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | TAT | Context | Base Deletion | 127690 | 5.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | TC | Context | Base Substitution | 639666 | 1556.85 | 26.00 | 26.23 | -0.23 | After |
| REGRESSION.HCC1395_tumor.L006 | TCA | Context | Base Insertion | 193498 | 6.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | TCA | Context | Base Deletion | 193498 | 14.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | TCC | Context | Base Insertion | 198856 | 32.41 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L006 | TCC | Context | Base Deletion | 198856 | 11.37 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | TCG | Context | Base Insertion | 25831 | 1.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | TCG | Context | Base Deletion | 25831 | 1.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | TCT | Context | Base Insertion | 220679 | 5.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | TCT | Context | Base Deletion | 220679 | 13.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | TG | Context | Base Substitution | 832915 | 321.91 | 33.00 | 29.50 | 3.50 | After |
| REGRESSION.HCC1395_tumor.L006 | TGA | Context | Base Insertion | 202293 | 2.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | TGA | Context | Base Deletion | 202293 | 6.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | TGC | Context | Base Insertion | 187072 | 3.82 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | TGC | Context | Base Deletion | 187072 | 4.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | TGG | Context | Base Insertion | 237558 | 5.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | TGG | Context | Base Deletion | 237558 | 9.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | TGT | Context | Base Insertion | 207398 | 13.09 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | TGT | Context | Base Deletion | 207398 | 32.36 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L006 | TT | Context | Base Substitution | 831450 | 895.78 | 30.00 | 27.70 | 2.30 | After |
| REGRESSION.HCC1395_tumor.L006 | TTA | Context | Base Insertion | 146121 | 4.56 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | TTA | Context | Base Deletion | 146121 | 7.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | TTC | Context | Base Insertion | 190893 | 4.88 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | TTC | Context | Base Deletion | 190893 | 13.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | TTG | Context | Base Insertion | 168953 | 2.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | TTG | Context | Base Deletion | 168953 | 8.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | TTT | Context | Base Insertion | 290752 | 60.74 | 42.00 | 45.00 | -3.00 | After |
| REGRESSION.HCC1395_tumor.L006 | TTT | Context | Base Deletion | 290752 | 157.23 | 38.00 | 45.00 | -7.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -1 | Cycle | Base Substitution | 38061 | 145.63 | 24.00 | 23.61 | 0.39 | After |
| REGRESSION.HCC1395_tumor.L006 | -10 | Cycle | Base Substitution | 38446 | 53.53 | 28.00 | 27.44 | 0.56 | After |
| REGRESSION.HCC1395_tumor.L006 | -10 | Cycle | Base Insertion | 38446 | 0.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -10 | Cycle | Base Deletion | 38446 | 2.17 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -100 | Cycle | Base Substitution | 35875 | 78.70 | 27.00 | 26.29 | 0.71 | After |
| REGRESSION.HCC1395_tumor.L006 | -100 | Cycle | Base Insertion | 35564 | 2.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -100 | Cycle | Base Deletion | 35564 | 4.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -101 | Cycle | Base Substitution | 35890 | 68.98 | 27.00 | 26.70 | 0.30 | After |
| REGRESSION.HCC1395_tumor.L006 | -101 | Cycle | Base Insertion | 35589 | 0.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -101 | Cycle | Base Deletion | 35589 | 4.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -102 | Cycle | Base Substitution | 35804 | 87.32 | 26.00 | 26.39 | -0.39 | After |
| REGRESSION.HCC1395_tumor.L006 | -102 | Cycle | Base Insertion | 35493 | 2.07 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -102 | Cycle | Base Deletion | 35493 | 3.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -103 | Cycle | Base Substitution | 35679 | 65.61 | 27.00 | 26.40 | 0.60 | After |
| REGRESSION.HCC1395_tumor.L006 | -103 | Cycle | Base Insertion | 35383 | 2.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -103 | Cycle | Base Deletion | 35383 | 3.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -104 | Cycle | Base Substitution | 35663 | 73.82 | 27.00 | 26.27 | 0.73 | After |
| REGRESSION.HCC1395_tumor.L006 | -104 | Cycle | Base Insertion | 35362 | 1.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -104 | Cycle | Base Deletion | 35362 | 4.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -105 | Cycle | Base Substitution | 35631 | 75.83 | 27.00 | 26.38 | 0.62 | After |
| REGRESSION.HCC1395_tumor.L006 | -105 | Cycle | Base Insertion | 35339 | 2.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -105 | Cycle | Base Deletion | 35339 | 3.07 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -106 | Cycle | Base Substitution | 35493 | 70.76 | 27.00 | 26.40 | 0.60 | After |
| REGRESSION.HCC1395_tumor.L006 | -106 | Cycle | Base Insertion | 35208 | 2.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -106 | Cycle | Base Deletion | 35208 | 2.84 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -107 | Cycle | Base Substitution | 35436 | 68.17 | 27.00 | 26.33 | 0.67 | After |
| REGRESSION.HCC1395_tumor.L006 | -107 | Cycle | Base Insertion | 35133 | 1.77 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -107 | Cycle | Base Deletion | 35133 | 3.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -108 | Cycle | Base Substitution | 35408 | 92.94 | 26.00 | 26.31 | -0.31 | After |
| REGRESSION.HCC1395_tumor.L006 | -108 | Cycle | Base Insertion | 35102 | 1.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -108 | Cycle | Base Deletion | 35102 | 3.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -109 | Cycle | Base Substitution | 35212 | 68.84 | 27.00 | 26.44 | 0.56 | After |
| REGRESSION.HCC1395_tumor.L006 | -109 | Cycle | Base Insertion | 34907 | 1.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -109 | Cycle | Base Deletion | 34907 | 4.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -11 | Cycle | Base Substitution | 38514 | 49.87 | 28.00 | 27.52 | 0.48 | After |
| REGRESSION.HCC1395_tumor.L006 | -11 | Cycle | Base Insertion | 38514 | 2.10 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -11 | Cycle | Base Deletion | 38514 | 2.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -110 | Cycle | Base Substitution | 35146 | 71.41 | 27.00 | 26.24 | 0.76 | After |
| REGRESSION.HCC1395_tumor.L006 | -110 | Cycle | Base Insertion | 34835 | 0.77 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -110 | Cycle | Base Deletion | 34835 | 4.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -111 | Cycle | Base Substitution | 35130 | 65.81 | 27.00 | 26.26 | 0.74 | After |
| REGRESSION.HCC1395_tumor.L006 | -111 | Cycle | Base Insertion | 34816 | 1.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -111 | Cycle | Base Deletion | 34816 | 3.36 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -112 | Cycle | Base Substitution | 35105 | 91.66 | 26.00 | 26.31 | -0.31 | After |
| REGRESSION.HCC1395_tumor.L006 | -112 | Cycle | Base Insertion | 34765 | 1.29 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -112 | Cycle | Base Deletion | 34765 | 2.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -113 | Cycle | Base Substitution | 35068 | 77.98 | 26.00 | 26.33 | -0.33 | After |
| REGRESSION.HCC1395_tumor.L006 | -113 | Cycle | Base Insertion | 34713 | 0.95 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -113 | Cycle | Base Deletion | 34713 | 2.81 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -114 | Cycle | Base Substitution | 34916 | 70.42 | 27.00 | 26.40 | 0.60 | After |
| REGRESSION.HCC1395_tumor.L006 | -114 | Cycle | Base Insertion | 34551 | 0.95 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -114 | Cycle | Base Deletion | 34551 | 2.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -115 | Cycle | Base Substitution | 34739 | 81.63 | 26.00 | 26.37 | -0.37 | After |
| REGRESSION.HCC1395_tumor.L006 | -115 | Cycle | Base Insertion | 34366 | 1.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -115 | Cycle | Base Deletion | 34366 | 4.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -116 | Cycle | Base Substitution | 34631 | 92.00 | 26.00 | 26.18 | -0.18 | After |
| REGRESSION.HCC1395_tumor.L006 | -116 | Cycle | Base Insertion | 34268 | 2.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -116 | Cycle | Base Deletion | 34268 | 3.07 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -117 | Cycle | Base Substitution | 34648 | 90.62 | 26.00 | 26.06 | -0.06 | After |
| REGRESSION.HCC1395_tumor.L006 | -117 | Cycle | Base Insertion | 34274 | 1.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -117 | Cycle | Base Deletion | 34274 | 4.55 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -118 | Cycle | Base Substitution | 34527 | 90.76 | 26.00 | 26.11 | -0.11 | After |
| REGRESSION.HCC1395_tumor.L006 | -118 | Cycle | Base Insertion | 34151 | 1.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -118 | Cycle | Base Deletion | 34151 | 3.10 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -119 | Cycle | Base Substitution | 34564 | 110.14 | 25.00 | 25.44 | -0.44 | After |
| REGRESSION.HCC1395_tumor.L006 | -119 | Cycle | Base Insertion | 34189 | 1.64 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -119 | Cycle | Base Deletion | 34189 | 3.38 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -12 | Cycle | Base Substitution | 38463 | 47.02 | 29.00 | 28.04 | 0.96 | After |
| REGRESSION.HCC1395_tumor.L006 | -12 | Cycle | Base Insertion | 38463 | 1.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -12 | Cycle | Base Deletion | 38463 | 3.18 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -120 | Cycle | Base Substitution | 34442 | 77.38 | 26.00 | 26.19 | -0.19 | After |
| REGRESSION.HCC1395_tumor.L006 | -120 | Cycle | Base Insertion | 34081 | 1.95 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -120 | Cycle | Base Deletion | 34081 | 3.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -121 | Cycle | Base Substitution | 34222 | 101.71 | 25.00 | 25.45 | -0.45 | After |
| REGRESSION.HCC1395_tumor.L006 | -121 | Cycle | Base Insertion | 33840 | 1.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -121 | Cycle | Base Deletion | 33840 | 2.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -122 | Cycle | Base Substitution | 34103 | 73.99 | 27.00 | 26.21 | 0.79 | After |
| REGRESSION.HCC1395_tumor.L006 | -122 | Cycle | Base Insertion | 33725 | 0.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -122 | Cycle | Base Deletion | 33725 | 2.84 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -123 | Cycle | Base Substitution | 34157 | 84.09 | 26.00 | 25.94 | 0.06 | After |
| REGRESSION.HCC1395_tumor.L006 | -123 | Cycle | Base Insertion | 33790 | 1.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -123 | Cycle | Base Deletion | 33790 | 2.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -124 | Cycle | Base Substitution | 34034 | 87.17 | 26.00 | 26.03 | -0.03 | After |
| REGRESSION.HCC1395_tumor.L006 | -124 | Cycle | Base Insertion | 33670 | 2.21 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -124 | Cycle | Base Deletion | 33670 | 3.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -125 | Cycle | Base Substitution | 33902 | 77.46 | 26.00 | 26.11 | -0.11 | After |
| REGRESSION.HCC1395_tumor.L006 | -125 | Cycle | Base Insertion | 33526 | 1.37 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -125 | Cycle | Base Deletion | 33526 | 3.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -126 | Cycle | Base Substitution | 33804 | 76.00 | 26.00 | 26.24 | -0.24 | After |
| REGRESSION.HCC1395_tumor.L006 | -126 | Cycle | Base Insertion | 33425 | 0.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -126 | Cycle | Base Deletion | 33425 | 2.95 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -127 | Cycle | Base Substitution | 33792 | 77.73 | 26.00 | 26.19 | -0.19 | After |
| REGRESSION.HCC1395_tumor.L006 | -127 | Cycle | Base Insertion | 33408 | 0.81 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -127 | Cycle | Base Deletion | 33408 | 3.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -128 | Cycle | Base Substitution | 33701 | 81.17 | 26.00 | 26.06 | -0.06 | After |
| REGRESSION.HCC1395_tumor.L006 | -128 | Cycle | Base Insertion | 33304 | 1.46 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -128 | Cycle | Base Deletion | 33304 | 3.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -129 | Cycle | Base Substitution | 33653 | 78.73 | 26.00 | 26.28 | -0.28 | After |
| REGRESSION.HCC1395_tumor.L006 | -129 | Cycle | Base Insertion | 33233 | 3.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -129 | Cycle | Base Deletion | 33233 | 2.48 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -13 | Cycle | Base Substitution | 38465 | 68.13 | 27.00 | 27.58 | -0.58 | After |
| REGRESSION.HCC1395_tumor.L006 | -13 | Cycle | Base Insertion | 38465 | 0.85 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -13 | Cycle | Base Deletion | 38465 | 3.30 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -130 | Cycle | Base Substitution | 33488 | 77.61 | 26.00 | 26.19 | -0.19 | After |
| REGRESSION.HCC1395_tumor.L006 | -130 | Cycle | Base Insertion | 33087 | 2.29 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -130 | Cycle | Base Deletion | 33087 | 2.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -131 | Cycle | Base Substitution | 33429 | 70.59 | 27.00 | 26.11 | 0.89 | After |
| REGRESSION.HCC1395_tumor.L006 | -131 | Cycle | Base Insertion | 33028 | 0.85 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -131 | Cycle | Base Deletion | 33028 | 2.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -132 | Cycle | Base Substitution | 33268 | 74.36 | 26.00 | 26.18 | -0.18 | After |
| REGRESSION.HCC1395_tumor.L006 | -132 | Cycle | Base Insertion | 32873 | 0.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -132 | Cycle | Base Deletion | 32873 | 1.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -133 | Cycle | Base Substitution | 33091 | 87.20 | 26.00 | 25.89 | 0.11 | After |
| REGRESSION.HCC1395_tumor.L006 | -133 | Cycle | Base Insertion | 32713 | 3.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -133 | Cycle | Base Deletion | 32713 | 2.30 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -134 | Cycle | Base Substitution | 32966 | 62.61 | 27.00 | 26.23 | 0.77 | After |
| REGRESSION.HCC1395_tumor.L006 | -134 | Cycle | Base Insertion | 32577 | 0.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -134 | Cycle | Base Deletion | 32577 | 2.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -135 | Cycle | Base Substitution | 32901 | 71.58 | 27.00 | 26.02 | 0.98 | After |
| REGRESSION.HCC1395_tumor.L006 | -135 | Cycle | Base Insertion | 32497 | 0.79 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -135 | Cycle | Base Deletion | 32497 | 1.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -136 | Cycle | Base Substitution | 32903 | 76.34 | 26.00 | 26.17 | -0.17 | After |
| REGRESSION.HCC1395_tumor.L006 | -136 | Cycle | Base Insertion | 32480 | 1.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -136 | Cycle | Base Deletion | 32480 | 1.96 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -137 | Cycle | Base Substitution | 32819 | 81.34 | 26.00 | 26.08 | -0.08 | After |
| REGRESSION.HCC1395_tumor.L006 | -137 | Cycle | Base Insertion | 32367 | 0.72 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -137 | Cycle | Base Deletion | 32367 | 2.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -138 | Cycle | Base Substitution | 32707 | 83.24 | 26.00 | 25.37 | 0.63 | After |
| REGRESSION.HCC1395_tumor.L006 | -138 | Cycle | Base Insertion | 32219 | 1.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -138 | Cycle | Base Deletion | 32219 | 2.17 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -139 | Cycle | Base Substitution | 32618 | 72.28 | 27.00 | 26.09 | 0.91 | After |
| REGRESSION.HCC1395_tumor.L006 | -139 | Cycle | Base Insertion | 32098 | 0.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -139 | Cycle | Base Deletion | 32098 | 2.17 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -14 | Cycle | Base Substitution | 38536 | 55.84 | 28.00 | 27.61 | 0.39 | After |
| REGRESSION.HCC1395_tumor.L006 | -14 | Cycle | Base Insertion | 38536 | 0.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -14 | Cycle | Base Deletion | 38536 | 2.55 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -140 | Cycle | Base Substitution | 32542 | 65.21 | 27.00 | 26.03 | 0.97 | After |
| REGRESSION.HCC1395_tumor.L006 | -140 | Cycle | Base Insertion | 32029 | 1.18 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -140 | Cycle | Base Deletion | 32029 | 1.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -141 | Cycle | Base Substitution | 32342 | 61.06 | 27.00 | 26.11 | 0.89 | After |
| REGRESSION.HCC1395_tumor.L006 | -141 | Cycle | Base Insertion | 31808 | 0.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -141 | Cycle | Base Deletion | 31808 | 0.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -142 | Cycle | Base Substitution | 32144 | 69.05 | 26.00 | 25.95 | 0.05 | After |
| REGRESSION.HCC1395_tumor.L006 | -142 | Cycle | Base Insertion | 31540 | 0.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -142 | Cycle | Base Deletion | 31540 | 0.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -143 | Cycle | Base Substitution | 31994 | 72.08 | 26.00 | 26.11 | -0.11 | After |
| REGRESSION.HCC1395_tumor.L006 | -143 | Cycle | Base Insertion | 31308 | 0.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -143 | Cycle | Base Deletion | 31308 | 0.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -144 | Cycle | Base Substitution | 31848 | 32.91 | 28.00 | 26.90 | 1.10 | After |
| REGRESSION.HCC1395_tumor.L006 | -144 | Cycle | Base Insertion | 31123 | 0.37 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -144 | Cycle | Base Deletion | 31123 | 0.51 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -145 | Cycle | Base Substitution | 31636 | 48.50 | 27.00 | 26.77 | 0.23 | After |
| REGRESSION.HCC1395_tumor.L006 | -145 | Cycle | Base Insertion | 24461 | 1.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -145 | Cycle | Base Deletion | 24461 | 0.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -146 | Cycle | Base Substitution | 31419 | 20.43 | 28.00 | 26.05 | 1.95 | After |
| REGRESSION.HCC1395_tumor.L006 | -146 | Cycle | Base Insertion | 24374 | 1.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -146 | Cycle | Base Deletion | 24374 | 0.86 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -147 | Cycle | Base Substitution | 31329 | 30.83 | 26.00 | 22.21 | 3.79 | After |
| REGRESSION.HCC1395_tumor.L006 | -148 | Cycle | Base Substitution | 31189 | 19.38 | 24.00 | 16.05 | 7.95 | After |
| REGRESSION.HCC1395_tumor.L006 | -149 | Cycle | Base Substitution | 19387 | 17.14 | 22.00 | 14.11 | 7.89 | After |
| REGRESSION.HCC1395_tumor.L006 | -15 | Cycle | Base Substitution | 38431 | 38.41 | 29.00 | 27.55 | 1.45 | After |
| REGRESSION.HCC1395_tumor.L006 | -15 | Cycle | Base Insertion | 38431 | 1.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -15 | Cycle | Base Deletion | 38431 | 4.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -150 | Cycle | Base Substitution | 6838 | 17.22 | 26.00 | 26.73 | -0.73 | After |
| REGRESSION.HCC1395_tumor.L006 | -16 | Cycle | Base Substitution | 38473 | 48.16 | 28.00 | 27.54 | 0.46 | After |
| REGRESSION.HCC1395_tumor.L006 | -16 | Cycle | Base Insertion | 38473 | 1.21 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -16 | Cycle | Base Deletion | 38473 | 3.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -17 | Cycle | Base Substitution | 38470 | 45.21 | 28.00 | 27.49 | 0.51 | After |
| REGRESSION.HCC1395_tumor.L006 | -17 | Cycle | Base Insertion | 38469 | 1.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -17 | Cycle | Base Deletion | 38469 | 3.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -18 | Cycle | Base Substitution | 38456 | 56.14 | 28.00 | 27.57 | 0.43 | After |
| REGRESSION.HCC1395_tumor.L006 | -18 | Cycle | Base Insertion | 38455 | 2.42 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -18 | Cycle | Base Deletion | 38455 | 4.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -19 | Cycle | Base Substitution | 38455 | 37.02 | 29.00 | 27.80 | 1.20 | After |
| REGRESSION.HCC1395_tumor.L006 | -19 | Cycle | Base Insertion | 38454 | 0.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -19 | Cycle | Base Deletion | 38454 | 4.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -2 | Cycle | Base Substitution | 38500 | 126.14 | 25.00 | 25.58 | -0.58 | After |
| REGRESSION.HCC1395_tumor.L006 | -20 | Cycle | Base Substitution | 38474 | 59.24 | 28.00 | 27.55 | 0.45 | After |
| REGRESSION.HCC1395_tumor.L006 | -20 | Cycle | Base Insertion | 38473 | 1.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -20 | Cycle | Base Deletion | 38473 | 5.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -21 | Cycle | Base Substitution | 38366 | 50.98 | 28.00 | 27.53 | 0.47 | After |
| REGRESSION.HCC1395_tumor.L006 | -21 | Cycle | Base Insertion | 38366 | 1.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -21 | Cycle | Base Deletion | 38366 | 4.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -22 | Cycle | Base Substitution | 38354 | 50.81 | 28.00 | 27.71 | 0.29 | After |
| REGRESSION.HCC1395_tumor.L006 | -22 | Cycle | Base Insertion | 38353 | 1.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -22 | Cycle | Base Deletion | 38353 | 5.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -23 | Cycle | Base Substitution | 38437 | 39.94 | 29.00 | 27.94 | 1.06 | After |
| REGRESSION.HCC1395_tumor.L006 | -23 | Cycle | Base Insertion | 38436 | 2.38 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -23 | Cycle | Base Deletion | 38436 | 6.18 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -24 | Cycle | Base Substitution | 38411 | 59.11 | 28.00 | 27.59 | 0.41 | After |
| REGRESSION.HCC1395_tumor.L006 | -24 | Cycle | Base Insertion | 38410 | 2.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -24 | Cycle | Base Deletion | 38410 | 5.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -25 | Cycle | Base Substitution | 38369 | 44.92 | 29.00 | 28.25 | 0.75 | After |
| REGRESSION.HCC1395_tumor.L006 | -25 | Cycle | Base Insertion | 38369 | 2.31 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -25 | Cycle | Base Deletion | 38369 | 4.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -26 | Cycle | Base Substitution | 38351 | 62.11 | 27.00 | 26.57 | 0.43 | After |
| REGRESSION.HCC1395_tumor.L006 | -26 | Cycle | Base Insertion | 38351 | 2.17 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -26 | Cycle | Base Deletion | 38351 | 4.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -27 | Cycle | Base Substitution | 38365 | 35.31 | 29.00 | 27.32 | 1.68 | After |
| REGRESSION.HCC1395_tumor.L006 | -27 | Cycle | Base Insertion | 38364 | 2.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -27 | Cycle | Base Deletion | 38364 | 3.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -28 | Cycle | Base Substitution | 38372 | 59.77 | 27.00 | 26.58 | 0.42 | After |
| REGRESSION.HCC1395_tumor.L006 | -28 | Cycle | Base Insertion | 38372 | 1.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -28 | Cycle | Base Deletion | 38372 | 4.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -29 | Cycle | Base Substitution | 38168 | 48.45 | 28.00 | 26.81 | 1.19 | After |
| REGRESSION.HCC1395_tumor.L006 | -29 | Cycle | Base Insertion | 38164 | 2.82 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -29 | Cycle | Base Deletion | 38164 | 4.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -3 | Cycle | Base Substitution | 38706 | 136.89 | 25.00 | 25.74 | -0.74 | After |
| REGRESSION.HCC1395_tumor.L006 | -30 | Cycle | Base Substitution | 38260 | 52.81 | 28.00 | 27.03 | 0.97 | After |
| REGRESSION.HCC1395_tumor.L006 | -30 | Cycle | Base Insertion | 38256 | 1.37 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -30 | Cycle | Base Deletion | 38256 | 5.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -31 | Cycle | Base Substitution | 38185 | 69.21 | 27.00 | 26.61 | 0.39 | After |
| REGRESSION.HCC1395_tumor.L006 | -31 | Cycle | Base Insertion | 38182 | 1.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -31 | Cycle | Base Deletion | 38182 | 4.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -32 | Cycle | Base Substitution | 38277 | 41.84 | 28.00 | 26.70 | 1.30 | After |
| REGRESSION.HCC1395_tumor.L006 | -32 | Cycle | Base Insertion | 38273 | 1.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -32 | Cycle | Base Deletion | 38273 | 5.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -33 | Cycle | Base Substitution | 38188 | 65.78 | 27.00 | 26.62 | 0.38 | After |
| REGRESSION.HCC1395_tumor.L006 | -33 | Cycle | Base Insertion | 38185 | 2.02 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -33 | Cycle | Base Deletion | 38185 | 4.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -34 | Cycle | Base Substitution | 38263 | 61.84 | 27.00 | 26.54 | 0.46 | After |
| REGRESSION.HCC1395_tumor.L006 | -34 | Cycle | Base Insertion | 38260 | 1.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -34 | Cycle | Base Deletion | 38260 | 3.85 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -35 | Cycle | Base Substitution | 38307 | 52.90 | 28.00 | 26.84 | 1.16 | After |
| REGRESSION.HCC1395_tumor.L006 | -35 | Cycle | Base Insertion | 38301 | 1.55 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -35 | Cycle | Base Deletion | 38301 | 3.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -36 | Cycle | Base Substitution | 38278 | 74.53 | 27.00 | 26.73 | 0.27 | After |
| REGRESSION.HCC1395_tumor.L006 | -36 | Cycle | Base Insertion | 38272 | 2.09 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -36 | Cycle | Base Deletion | 38272 | 2.99 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -37 | Cycle | Base Substitution | 38286 | 41.44 | 29.00 | 27.40 | 1.60 | After |
| REGRESSION.HCC1395_tumor.L006 | -37 | Cycle | Base Insertion | 38280 | 3.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -37 | Cycle | Base Deletion | 38280 | 3.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -38 | Cycle | Base Substitution | 38218 | 53.54 | 28.00 | 26.56 | 1.44 | After |
| REGRESSION.HCC1395_tumor.L006 | -38 | Cycle | Base Insertion | 38211 | 3.42 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -38 | Cycle | Base Deletion | 38211 | 3.77 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -39 | Cycle | Base Substitution | 38219 | 50.36 | 28.00 | 27.02 | 0.98 | After |
| REGRESSION.HCC1395_tumor.L006 | -39 | Cycle | Base Insertion | 38213 | 1.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -39 | Cycle | Base Deletion | 38213 | 3.47 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -4 | Cycle | Base Substitution | 38482 | 80.77 | 27.00 | 26.20 | 0.80 | After |
| REGRESSION.HCC1395_tumor.L006 | -40 | Cycle | Base Substitution | 38130 | 43.72 | 28.00 | 26.92 | 1.08 | After |
| REGRESSION.HCC1395_tumor.L006 | -40 | Cycle | Base Insertion | 38123 | 1.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -40 | Cycle | Base Deletion | 38123 | 2.85 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -41 | Cycle | Base Substitution | 38232 | 65.97 | 27.00 | 26.88 | 0.12 | After |
| REGRESSION.HCC1395_tumor.L006 | -41 | Cycle | Base Insertion | 38225 | 1.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -41 | Cycle | Base Deletion | 38225 | 3.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -42 | Cycle | Base Substitution | 38122 | 56.84 | 28.00 | 26.71 | 1.29 | After |
| REGRESSION.HCC1395_tumor.L006 | -42 | Cycle | Base Insertion | 38113 | 2.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -42 | Cycle | Base Deletion | 38113 | 3.29 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -43 | Cycle | Base Substitution | 38131 | 55.89 | 28.00 | 26.74 | 1.26 | After |
| REGRESSION.HCC1395_tumor.L006 | -43 | Cycle | Base Insertion | 38125 | 1.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -43 | Cycle | Base Deletion | 38125 | 4.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -44 | Cycle | Base Substitution | 38022 | 63.34 | 27.00 | 26.89 | 0.11 | After |
| REGRESSION.HCC1395_tumor.L006 | -44 | Cycle | Base Insertion | 38017 | 2.21 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -44 | Cycle | Base Deletion | 38017 | 3.72 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -45 | Cycle | Base Substitution | 38145 | 55.19 | 28.00 | 26.87 | 1.13 | After |
| REGRESSION.HCC1395_tumor.L006 | -45 | Cycle | Base Insertion | 38134 | 1.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -45 | Cycle | Base Deletion | 38134 | 3.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -46 | Cycle | Base Substitution | 37988 | 59.48 | 27.00 | 26.74 | 0.26 | After |
| REGRESSION.HCC1395_tumor.L006 | -46 | Cycle | Base Insertion | 37980 | 1.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -46 | Cycle | Base Deletion | 37980 | 3.55 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -47 | Cycle | Base Substitution | 38145 | 60.10 | 27.00 | 26.71 | 0.29 | After |
| REGRESSION.HCC1395_tumor.L006 | -47 | Cycle | Base Insertion | 38134 | 1.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -47 | Cycle | Base Deletion | 38134 | 3.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -48 | Cycle | Base Substitution | 38122 | 63.18 | 27.00 | 26.88 | 0.12 | After |
| REGRESSION.HCC1395_tumor.L006 | -48 | Cycle | Base Insertion | 38113 | 1.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -48 | Cycle | Base Deletion | 38113 | 3.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -49 | Cycle | Base Substitution | 38081 | 56.83 | 28.00 | 26.75 | 1.25 | After |
| REGRESSION.HCC1395_tumor.L006 | -49 | Cycle | Base Insertion | 38074 | 1.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -49 | Cycle | Base Deletion | 38074 | 2.95 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -5 | Cycle | Base Substitution | 38505 | 63.91 | 27.00 | 26.80 | 0.20 | After |
| REGRESSION.HCC1395_tumor.L006 | -5 | Cycle | Base Insertion | 38505 | 0.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -5 | Cycle | Base Deletion | 38505 | 0.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -50 | Cycle | Base Substitution | 38047 | 69.33 | 27.00 | 26.80 | 0.20 | After |
| REGRESSION.HCC1395_tumor.L006 | -50 | Cycle | Base Insertion | 38030 | 1.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -50 | Cycle | Base Deletion | 38030 | 3.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -51 | Cycle | Base Substitution | 38114 | 64.01 | 27.00 | 26.81 | 0.19 | After |
| REGRESSION.HCC1395_tumor.L006 | -51 | Cycle | Base Insertion | 38098 | 1.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -51 | Cycle | Base Deletion | 38098 | 3.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -52 | Cycle | Base Substitution | 38126 | 70.49 | 27.00 | 26.66 | 0.34 | After |
| REGRESSION.HCC1395_tumor.L006 | -52 | Cycle | Base Insertion | 38106 | 1.48 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -52 | Cycle | Base Deletion | 38106 | 3.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -53 | Cycle | Base Substitution | 38043 | 56.22 | 28.00 | 26.80 | 1.20 | After |
| REGRESSION.HCC1395_tumor.L006 | -53 | Cycle | Base Insertion | 38014 | 2.42 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -53 | Cycle | Base Deletion | 38014 | 2.94 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -54 | Cycle | Base Substitution | 38038 | 63.64 | 27.00 | 26.95 | 0.05 | After |
| REGRESSION.HCC1395_tumor.L006 | -54 | Cycle | Base Insertion | 38007 | 1.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -54 | Cycle | Base Deletion | 38007 | 3.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -55 | Cycle | Base Substitution | 37795 | 59.48 | 28.00 | 27.13 | 0.87 | After |
| REGRESSION.HCC1395_tumor.L006 | -55 | Cycle | Base Insertion | 37761 | 1.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -55 | Cycle | Base Deletion | 37761 | 2.94 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -56 | Cycle | Base Substitution | 38044 | 52.95 | 28.00 | 27.03 | 0.97 | After |
| REGRESSION.HCC1395_tumor.L006 | -56 | Cycle | Base Insertion | 38001 | 1.94 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -56 | Cycle | Base Deletion | 38001 | 3.36 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -57 | Cycle | Base Substitution | 37902 | 65.36 | 27.00 | 26.85 | 0.15 | After |
| REGRESSION.HCC1395_tumor.L006 | -57 | Cycle | Base Insertion | 37861 | 1.57 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -57 | Cycle | Base Deletion | 37861 | 2.88 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -58 | Cycle | Base Substitution | 38061 | 71.34 | 27.00 | 27.15 | -0.15 | After |
| REGRESSION.HCC1395_tumor.L006 | -58 | Cycle | Base Insertion | 38015 | 1.46 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -58 | Cycle | Base Deletion | 38015 | 2.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -59 | Cycle | Base Substitution | 37800 | 48.80 | 28.00 | 26.98 | 1.02 | After |
| REGRESSION.HCC1395_tumor.L006 | -59 | Cycle | Base Insertion | 37742 | 1.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -59 | Cycle | Base Deletion | 37742 | 3.10 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -6 | Cycle | Base Substitution | 38463 | 68.14 | 27.00 | 26.97 | 0.03 | After |
| REGRESSION.HCC1395_tumor.L006 | -6 | Cycle | Base Insertion | 38463 | 1.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -6 | Cycle | Base Deletion | 38463 | 1.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -60 | Cycle | Base Substitution | 37800 | 66.24 | 28.00 | 27.17 | 0.83 | After |
| REGRESSION.HCC1395_tumor.L006 | -60 | Cycle | Base Insertion | 37740 | 1.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -60 | Cycle | Base Deletion | 37740 | 4.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -61 | Cycle | Base Substitution | 37774 | 65.09 | 27.00 | 26.74 | 0.26 | After |
| REGRESSION.HCC1395_tumor.L006 | -61 | Cycle | Base Insertion | 37704 | 1.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -61 | Cycle | Base Deletion | 37704 | 3.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -62 | Cycle | Base Substitution | 37805 | 59.27 | 27.00 | 26.68 | 0.32 | After |
| REGRESSION.HCC1395_tumor.L006 | -62 | Cycle | Base Insertion | 37734 | 1.10 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -62 | Cycle | Base Deletion | 37734 | 3.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -63 | Cycle | Base Substitution | 37909 | 48.62 | 28.00 | 26.88 | 1.12 | After |
| REGRESSION.HCC1395_tumor.L006 | -63 | Cycle | Base Insertion | 37834 | 2.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -63 | Cycle | Base Deletion | 37834 | 3.85 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -64 | Cycle | Base Substitution | 37806 | 45.53 | 28.00 | 26.74 | 1.26 | After |
| REGRESSION.HCC1395_tumor.L006 | -64 | Cycle | Base Insertion | 37725 | 2.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -64 | Cycle | Base Deletion | 37725 | 3.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -65 | Cycle | Base Substitution | 37746 | 70.59 | 27.00 | 26.74 | 0.26 | After |
| REGRESSION.HCC1395_tumor.L006 | -65 | Cycle | Base Insertion | 37666 | 2.42 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -65 | Cycle | Base Deletion | 37666 | 3.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -66 | Cycle | Base Substitution | 37674 | 56.55 | 28.00 | 26.67 | 1.33 | After |
| REGRESSION.HCC1395_tumor.L006 | -66 | Cycle | Base Insertion | 37580 | 1.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -66 | Cycle | Base Deletion | 37580 | 2.77 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -67 | Cycle | Base Substitution | 37701 | 71.75 | 27.00 | 26.60 | 0.40 | After |
| REGRESSION.HCC1395_tumor.L006 | -67 | Cycle | Base Insertion | 37606 | 1.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -67 | Cycle | Base Deletion | 37606 | 2.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -68 | Cycle | Base Substitution | 37685 | 73.22 | 27.00 | 26.55 | 0.45 | After |
| REGRESSION.HCC1395_tumor.L006 | -68 | Cycle | Base Insertion | 37592 | 1.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -68 | Cycle | Base Deletion | 37592 | 2.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -69 | Cycle | Base Substitution | 37710 | 43.24 | 29.00 | 27.12 | 1.88 | After |
| REGRESSION.HCC1395_tumor.L006 | -69 | Cycle | Base Insertion | 37601 | 1.51 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -69 | Cycle | Base Deletion | 37601 | 3.85 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -7 | Cycle | Base Substitution | 38408 | 80.50 | 27.00 | 26.89 | 0.11 | After |
| REGRESSION.HCC1395_tumor.L006 | -7 | Cycle | Base Insertion | 38408 | 1.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -7 | Cycle | Base Deletion | 38408 | 1.96 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -70 | Cycle | Base Substitution | 37737 | 72.67 | 27.00 | 26.71 | 0.29 | After |
| REGRESSION.HCC1395_tumor.L006 | -70 | Cycle | Base Insertion | 37621 | 1.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -70 | Cycle | Base Deletion | 37621 | 4.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -71 | Cycle | Base Substitution | 37686 | 72.51 | 27.00 | 26.64 | 0.36 | After |
| REGRESSION.HCC1395_tumor.L006 | -71 | Cycle | Base Insertion | 37549 | 2.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -71 | Cycle | Base Deletion | 37549 | 4.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -72 | Cycle | Base Substitution | 37482 | 71.67 | 27.00 | 26.69 | 0.31 | After |
| REGRESSION.HCC1395_tumor.L006 | -72 | Cycle | Base Insertion | 37345 | 1.57 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -72 | Cycle | Base Deletion | 37345 | 3.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -73 | Cycle | Base Substitution | 37461 | 77.94 | 27.00 | 26.45 | 0.55 | After |
| REGRESSION.HCC1395_tumor.L006 | -73 | Cycle | Base Insertion | 37304 | 2.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -73 | Cycle | Base Deletion | 37304 | 4.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -74 | Cycle | Base Substitution | 37525 | 78.90 | 27.00 | 26.70 | 0.30 | After |
| REGRESSION.HCC1395_tumor.L006 | -74 | Cycle | Base Insertion | 37376 | 2.72 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -74 | Cycle | Base Deletion | 37376 | 4.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -75 | Cycle | Base Substitution | 37476 | 66.59 | 27.00 | 26.84 | 0.16 | After |
| REGRESSION.HCC1395_tumor.L006 | -75 | Cycle | Base Insertion | 37326 | 2.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -75 | Cycle | Base Deletion | 37326 | 5.07 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -76 | Cycle | Base Substitution | 37434 | 59.52 | 27.00 | 26.67 | 0.33 | After |
| REGRESSION.HCC1395_tumor.L006 | -76 | Cycle | Base Insertion | 37271 | 1.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -76 | Cycle | Base Deletion | 37271 | 3.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -77 | Cycle | Base Substitution | 37429 | 69.30 | 27.00 | 26.57 | 0.43 | After |
| REGRESSION.HCC1395_tumor.L006 | -77 | Cycle | Base Insertion | 37254 | 1.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -77 | Cycle | Base Deletion | 37254 | 4.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -78 | Cycle | Base Substitution | 37249 | 86.14 | 26.00 | 26.72 | -0.72 | After |
| REGRESSION.HCC1395_tumor.L006 | -78 | Cycle | Base Insertion | 37067 | 1.38 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -78 | Cycle | Base Deletion | 37067 | 4.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -79 | Cycle | Base Substitution | 37263 | 57.66 | 27.00 | 26.88 | 0.12 | After |
| REGRESSION.HCC1395_tumor.L006 | -79 | Cycle | Base Insertion | 37074 | 1.88 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -79 | Cycle | Base Deletion | 37074 | 4.38 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -8 | Cycle | Base Substitution | 38586 | 66.46 | 28.00 | 27.01 | 0.99 | After |
| REGRESSION.HCC1395_tumor.L006 | -8 | Cycle | Base Insertion | 38586 | 0.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -8 | Cycle | Base Deletion | 38586 | 2.18 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -80 | Cycle | Base Substitution | 37417 | 52.94 | 28.00 | 26.82 | 1.18 | After |
| REGRESSION.HCC1395_tumor.L006 | -80 | Cycle | Base Insertion | 37216 | 2.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -80 | Cycle | Base Deletion | 37216 | 4.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -81 | Cycle | Base Substitution | 37211 | 81.10 | 27.00 | 26.73 | 0.27 | After |
| REGRESSION.HCC1395_tumor.L006 | -81 | Cycle | Base Insertion | 36993 | 1.72 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -81 | Cycle | Base Deletion | 36993 | 4.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -82 | Cycle | Base Substitution | 37208 | 79.59 | 27.00 | 26.70 | 0.30 | After |
| REGRESSION.HCC1395_tumor.L006 | -82 | Cycle | Base Insertion | 36982 | 1.10 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -82 | Cycle | Base Deletion | 36982 | 4.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -83 | Cycle | Base Substitution | 37022 | 70.99 | 27.00 | 26.70 | 0.30 | After |
| REGRESSION.HCC1395_tumor.L006 | -83 | Cycle | Base Insertion | 36780 | 1.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -83 | Cycle | Base Deletion | 36780 | 5.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -84 | Cycle | Base Substitution | 37059 | 59.00 | 27.00 | 26.67 | 0.33 | After |
| REGRESSION.HCC1395_tumor.L006 | -84 | Cycle | Base Insertion | 36821 | 0.96 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -84 | Cycle | Base Deletion | 36821 | 5.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -85 | Cycle | Base Substitution | 36994 | 63.53 | 27.00 | 26.57 | 0.43 | After |
| REGRESSION.HCC1395_tumor.L006 | -85 | Cycle | Base Insertion | 36762 | 2.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -85 | Cycle | Base Deletion | 36762 | 3.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -86 | Cycle | Base Substitution | 36896 | 73.28 | 27.00 | 26.71 | 0.29 | After |
| REGRESSION.HCC1395_tumor.L006 | -86 | Cycle | Base Insertion | 36664 | 1.42 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -86 | Cycle | Base Deletion | 36664 | 3.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -87 | Cycle | Base Substitution | 36816 | 70.11 | 27.00 | 26.72 | 0.28 | After |
| REGRESSION.HCC1395_tumor.L006 | -87 | Cycle | Base Insertion | 36582 | 1.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -87 | Cycle | Base Deletion | 36582 | 3.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -88 | Cycle | Base Substitution | 36840 | 66.93 | 27.00 | 26.82 | 0.18 | After |
| REGRESSION.HCC1395_tumor.L006 | -88 | Cycle | Base Insertion | 36601 | 1.38 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -88 | Cycle | Base Deletion | 36601 | 3.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -89 | Cycle | Base Substitution | 36787 | 76.81 | 27.00 | 26.59 | 0.41 | After |
| REGRESSION.HCC1395_tumor.L006 | -89 | Cycle | Base Insertion | 36537 | 2.21 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -89 | Cycle | Base Deletion | 36537 | 3.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -9 | Cycle | Base Substitution | 38559 | 75.81 | 27.00 | 27.22 | -0.22 | After |
| REGRESSION.HCC1395_tumor.L006 | -9 | Cycle | Base Insertion | 38559 | 0.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -9 | Cycle | Base Deletion | 38559 | 2.37 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -90 | Cycle | Base Substitution | 36645 | 79.65 | 27.00 | 26.37 | 0.63 | After |
| REGRESSION.HCC1395_tumor.L006 | -90 | Cycle | Base Insertion | 36389 | 3.07 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -90 | Cycle | Base Deletion | 36389 | 3.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -91 | Cycle | Base Substitution | 36724 | 74.32 | 27.00 | 26.67 | 0.33 | After |
| REGRESSION.HCC1395_tumor.L006 | -91 | Cycle | Base Insertion | 36465 | 1.77 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -91 | Cycle | Base Deletion | 36465 | 3.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -92 | Cycle | Base Substitution | 36509 | 71.89 | 27.00 | 26.55 | 0.45 | After |
| REGRESSION.HCC1395_tumor.L006 | -92 | Cycle | Base Insertion | 36236 | 1.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -92 | Cycle | Base Deletion | 36236 | 4.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -93 | Cycle | Base Substitution | 36346 | 79.35 | 27.00 | 26.36 | 0.64 | After |
| REGRESSION.HCC1395_tumor.L006 | -93 | Cycle | Base Insertion | 36067 | 1.98 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -93 | Cycle | Base Deletion | 36067 | 3.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -94 | Cycle | Base Substitution | 36367 | 74.11 | 27.00 | 26.43 | 0.57 | After |
| REGRESSION.HCC1395_tumor.L006 | -94 | Cycle | Base Insertion | 36076 | 2.64 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -94 | Cycle | Base Deletion | 36076 | 3.38 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -95 | Cycle | Base Substitution | 36370 | 92.87 | 26.00 | 26.50 | -0.50 | After |
| REGRESSION.HCC1395_tumor.L006 | -95 | Cycle | Base Insertion | 36079 | 1.36 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -95 | Cycle | Base Deletion | 36079 | 3.94 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -96 | Cycle | Base Substitution | 36242 | 76.87 | 27.00 | 26.48 | 0.52 | After |
| REGRESSION.HCC1395_tumor.L006 | -96 | Cycle | Base Insertion | 35948 | 1.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -96 | Cycle | Base Deletion | 35948 | 5.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -97 | Cycle | Base Substitution | 36248 | 66.26 | 27.00 | 26.64 | 0.36 | After |
| REGRESSION.HCC1395_tumor.L006 | -97 | Cycle | Base Insertion | 35943 | 0.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -97 | Cycle | Base Deletion | 35943 | 3.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -98 | Cycle | Base Substitution | 36242 | 67.21 | 27.00 | 26.53 | 0.47 | After |
| REGRESSION.HCC1395_tumor.L006 | -98 | Cycle | Base Insertion | 35936 | 1.21 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -98 | Cycle | Base Deletion | 35936 | 4.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -99 | Cycle | Base Substitution | 36068 | 77.30 | 27.00 | 26.46 | 0.54 | After |
| REGRESSION.HCC1395_tumor.L006 | -99 | Cycle | Base Insertion | 35770 | 1.37 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | -99 | Cycle | Base Deletion | 35770 | 3.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 1 | Cycle | Base Substitution | 38147 | 78.90 | 27.00 | 26.11 | 0.89 | After |
| REGRESSION.HCC1395_tumor.L006 | 10 | Cycle | Base Substitution | 38562 | 44.92 | 28.00 | 27.48 | 0.52 | After |
| REGRESSION.HCC1395_tumor.L006 | 10 | Cycle | Base Insertion | 38562 | 2.31 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 10 | Cycle | Base Deletion | 38562 | 3.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 100 | Cycle | Base Substitution | 35909 | 59.88 | 27.00 | 26.95 | 0.05 | After |
| REGRESSION.HCC1395_tumor.L006 | 100 | Cycle | Base Insertion | 35609 | 1.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 100 | Cycle | Base Deletion | 35609 | 3.77 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 101 | Cycle | Base Substitution | 35887 | 56.81 | 27.00 | 26.98 | 0.02 | After |
| REGRESSION.HCC1395_tumor.L006 | 101 | Cycle | Base Insertion | 35596 | 1.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 101 | Cycle | Base Deletion | 35596 | 3.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 102 | Cycle | Base Substitution | 35846 | 44.88 | 28.00 | 27.18 | 0.82 | After |
| REGRESSION.HCC1395_tumor.L006 | 102 | Cycle | Base Insertion | 35524 | 3.26 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 102 | Cycle | Base Deletion | 35524 | 3.73 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 103 | Cycle | Base Substitution | 35849 | 61.09 | 28.00 | 27.22 | 0.78 | After |
| REGRESSION.HCC1395_tumor.L006 | 103 | Cycle | Base Insertion | 35544 | 0.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 103 | Cycle | Base Deletion | 35544 | 3.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 104 | Cycle | Base Substitution | 35663 | 73.23 | 27.00 | 26.62 | 0.38 | After |
| REGRESSION.HCC1395_tumor.L006 | 104 | Cycle | Base Insertion | 35375 | 0.77 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 104 | Cycle | Base Deletion | 35375 | 4.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 105 | Cycle | Base Substitution | 35652 | 56.81 | 27.00 | 26.72 | 0.28 | After |
| REGRESSION.HCC1395_tumor.L006 | 105 | Cycle | Base Insertion | 35358 | 1.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 105 | Cycle | Base Deletion | 35358 | 5.21 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 106 | Cycle | Base Substitution | 35584 | 57.16 | 27.00 | 26.93 | 0.07 | After |
| REGRESSION.HCC1395_tumor.L006 | 106 | Cycle | Base Insertion | 35314 | 0.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 106 | Cycle | Base Deletion | 35314 | 4.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 107 | Cycle | Base Substitution | 35483 | 78.10 | 27.00 | 26.71 | 0.29 | After |
| REGRESSION.HCC1395_tumor.L006 | 107 | Cycle | Base Insertion | 35161 | 1.44 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 107 | Cycle | Base Deletion | 35161 | 4.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 108 | Cycle | Base Substitution | 35331 | 91.66 | 26.00 | 26.03 | -0.03 | After |
| REGRESSION.HCC1395_tumor.L006 | 108 | Cycle | Base Insertion | 35020 | 1.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 108 | Cycle | Base Deletion | 35020 | 4.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 109 | Cycle | Base Substitution | 35319 | 68.90 | 27.00 | 26.56 | 0.44 | After |
| REGRESSION.HCC1395_tumor.L006 | 109 | Cycle | Base Insertion | 35012 | 1.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 109 | Cycle | Base Deletion | 35012 | 3.81 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 11 | Cycle | Base Substitution | 38516 | 37.90 | 29.00 | 27.59 | 1.41 | After |
| REGRESSION.HCC1395_tumor.L006 | 11 | Cycle | Base Insertion | 38516 | 1.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 11 | Cycle | Base Deletion | 38516 | 2.94 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 110 | Cycle | Base Substitution | 35172 | 93.08 | 26.00 | 26.22 | -0.22 | After |
| REGRESSION.HCC1395_tumor.L006 | 110 | Cycle | Base Insertion | 34857 | 1.17 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 110 | Cycle | Base Deletion | 34857 | 4.44 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 111 | Cycle | Base Substitution | 35046 | 64.75 | 27.00 | 26.67 | 0.33 | After |
| REGRESSION.HCC1395_tumor.L006 | 111 | Cycle | Base Insertion | 34745 | 1.07 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 111 | Cycle | Base Deletion | 34745 | 4.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 112 | Cycle | Base Substitution | 35005 | 55.67 | 27.00 | 26.64 | 0.36 | After |
| REGRESSION.HCC1395_tumor.L006 | 112 | Cycle | Base Insertion | 34683 | 1.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 112 | Cycle | Base Deletion | 34683 | 3.88 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 113 | Cycle | Base Substitution | 34927 | 75.60 | 27.00 | 26.56 | 0.44 | After |
| REGRESSION.HCC1395_tumor.L006 | 113 | Cycle | Base Insertion | 34582 | 0.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 113 | Cycle | Base Deletion | 34582 | 3.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 114 | Cycle | Base Substitution | 35001 | 66.29 | 27.00 | 26.70 | 0.30 | After |
| REGRESSION.HCC1395_tumor.L006 | 114 | Cycle | Base Insertion | 34612 | 0.95 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 114 | Cycle | Base Deletion | 34612 | 4.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 115 | Cycle | Base Substitution | 34859 | 62.99 | 27.00 | 26.81 | 0.19 | After |
| REGRESSION.HCC1395_tumor.L006 | 115 | Cycle | Base Insertion | 34499 | 1.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 115 | Cycle | Base Deletion | 34499 | 4.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 116 | Cycle | Base Substitution | 34799 | 65.67 | 27.00 | 26.70 | 0.30 | After |
| REGRESSION.HCC1395_tumor.L006 | 116 | Cycle | Base Insertion | 34434 | 1.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 116 | Cycle | Base Deletion | 34434 | 3.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 117 | Cycle | Base Substitution | 34828 | 77.61 | 26.00 | 26.61 | -0.61 | After |
| REGRESSION.HCC1395_tumor.L006 | 117 | Cycle | Base Insertion | 34467 | 2.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 117 | Cycle | Base Deletion | 34467 | 3.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 118 | Cycle | Base Substitution | 34596 | 70.61 | 27.00 | 26.65 | 0.35 | After |
| REGRESSION.HCC1395_tumor.L006 | 118 | Cycle | Base Insertion | 34231 | 1.55 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 118 | Cycle | Base Deletion | 34231 | 3.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 119 | Cycle | Base Substitution | 34466 | 75.62 | 27.00 | 26.61 | 0.39 | After |
| REGRESSION.HCC1395_tumor.L006 | 119 | Cycle | Base Insertion | 34090 | 1.57 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 119 | Cycle | Base Deletion | 34090 | 3.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 12 | Cycle | Base Substitution | 38440 | 42.12 | 29.00 | 27.53 | 1.47 | After |
| REGRESSION.HCC1395_tumor.L006 | 12 | Cycle | Base Insertion | 38440 | 2.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 12 | Cycle | Base Deletion | 38440 | 3.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 120 | Cycle | Base Substitution | 34385 | 64.63 | 27.00 | 26.53 | 0.47 | After |
| REGRESSION.HCC1395_tumor.L006 | 120 | Cycle | Base Insertion | 34013 | 2.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 120 | Cycle | Base Deletion | 34013 | 3.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 121 | Cycle | Base Substitution | 34387 | 66.52 | 27.00 | 26.30 | 0.70 | After |
| REGRESSION.HCC1395_tumor.L006 | 121 | Cycle | Base Insertion | 34025 | 2.21 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 121 | Cycle | Base Deletion | 34025 | 4.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 122 | Cycle | Base Substitution | 34300 | 70.43 | 27.00 | 26.50 | 0.50 | After |
| REGRESSION.HCC1395_tumor.L006 | 122 | Cycle | Base Insertion | 33926 | 3.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 122 | Cycle | Base Deletion | 33926 | 3.46 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 123 | Cycle | Base Substitution | 34098 | 74.69 | 27.00 | 26.30 | 0.70 | After |
| REGRESSION.HCC1395_tumor.L006 | 123 | Cycle | Base Insertion | 33747 | 1.99 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 123 | Cycle | Base Deletion | 33747 | 3.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 124 | Cycle | Base Substitution | 34089 | 75.12 | 27.00 | 26.53 | 0.47 | After |
| REGRESSION.HCC1395_tumor.L006 | 124 | Cycle | Base Insertion | 33736 | 4.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 124 | Cycle | Base Deletion | 33736 | 3.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 125 | Cycle | Base Substitution | 33856 | 56.87 | 27.00 | 26.76 | 0.24 | After |
| REGRESSION.HCC1395_tumor.L006 | 125 | Cycle | Base Insertion | 33490 | 5.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 125 | Cycle | Base Deletion | 33490 | 3.77 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 126 | Cycle | Base Substitution | 33815 | 85.66 | 26.00 | 26.35 | -0.35 | After |
| REGRESSION.HCC1395_tumor.L006 | 126 | Cycle | Base Insertion | 33444 | 3.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 126 | Cycle | Base Deletion | 33444 | 2.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 127 | Cycle | Base Substitution | 33767 | 62.32 | 27.00 | 26.40 | 0.60 | After |
| REGRESSION.HCC1395_tumor.L006 | 127 | Cycle | Base Insertion | 33404 | 0.96 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 127 | Cycle | Base Deletion | 33404 | 2.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 128 | Cycle | Base Substitution | 33636 | 66.01 | 27.00 | 26.58 | 0.42 | After |
| REGRESSION.HCC1395_tumor.L006 | 128 | Cycle | Base Insertion | 33268 | 1.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 128 | Cycle | Base Deletion | 33268 | 2.81 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 129 | Cycle | Base Substitution | 33583 | 73.92 | 27.00 | 26.31 | 0.69 | After |
| REGRESSION.HCC1395_tumor.L006 | 129 | Cycle | Base Insertion | 33182 | 0.99 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 129 | Cycle | Base Deletion | 33182 | 2.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 13 | Cycle | Base Substitution | 38445 | 48.32 | 28.00 | 27.50 | 0.50 | After |
| REGRESSION.HCC1395_tumor.L006 | 13 | Cycle | Base Insertion | 38445 | 1.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 13 | Cycle | Base Deletion | 38445 | 3.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 130 | Cycle | Base Substitution | 33439 | 66.93 | 27.00 | 26.32 | 0.68 | After |
| REGRESSION.HCC1395_tumor.L006 | 130 | Cycle | Base Insertion | 33062 | 2.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 130 | Cycle | Base Deletion | 33062 | 2.46 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 131 | Cycle | Base Substitution | 33461 | 68.53 | 27.00 | 26.44 | 0.56 | After |
| REGRESSION.HCC1395_tumor.L006 | 131 | Cycle | Base Insertion | 33061 | 0.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 131 | Cycle | Base Deletion | 33061 | 2.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 132 | Cycle | Base Substitution | 33432 | 58.73 | 27.00 | 26.33 | 0.67 | After |
| REGRESSION.HCC1395_tumor.L006 | 132 | Cycle | Base Insertion | 33034 | 0.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 132 | Cycle | Base Deletion | 33034 | 3.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 133 | Cycle | Base Substitution | 33229 | 71.55 | 27.00 | 26.43 | 0.57 | After |
| REGRESSION.HCC1395_tumor.L006 | 133 | Cycle | Base Insertion | 32869 | 0.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 133 | Cycle | Base Deletion | 32869 | 2.81 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 134 | Cycle | Base Substitution | 33165 | 66.09 | 27.00 | 26.60 | 0.40 | After |
| REGRESSION.HCC1395_tumor.L006 | 134 | Cycle | Base Insertion | 32770 | 0.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 134 | Cycle | Base Deletion | 32770 | 3.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 135 | Cycle | Base Substitution | 33099 | 78.70 | 26.00 | 26.46 | -0.46 | After |
| REGRESSION.HCC1395_tumor.L006 | 135 | Cycle | Base Insertion | 32716 | 0.29 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 135 | Cycle | Base Deletion | 32716 | 2.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 136 | Cycle | Base Substitution | 32890 | 55.81 | 27.00 | 26.63 | 0.37 | After |
| REGRESSION.HCC1395_tumor.L006 | 136 | Cycle | Base Insertion | 32486 | 0.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 136 | Cycle | Base Deletion | 32486 | 2.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 137 | Cycle | Base Substitution | 32898 | 57.95 | 27.00 | 26.43 | 0.57 | After |
| REGRESSION.HCC1395_tumor.L006 | 137 | Cycle | Base Insertion | 32499 | 0.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 137 | Cycle | Base Deletion | 32499 | 1.86 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 138 | Cycle | Base Substitution | 32789 | 66.43 | 27.00 | 26.56 | 0.44 | After |
| REGRESSION.HCC1395_tumor.L006 | 138 | Cycle | Base Insertion | 32389 | 1.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 138 | Cycle | Base Deletion | 32389 | 2.42 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 139 | Cycle | Base Substitution | 32753 | 65.56 | 27.00 | 26.43 | 0.57 | After |
| REGRESSION.HCC1395_tumor.L006 | 139 | Cycle | Base Insertion | 32323 | 1.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 139 | Cycle | Base Deletion | 32323 | 3.21 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 14 | Cycle | Base Substitution | 38477 | 48.47 | 28.00 | 27.53 | 0.47 | After |
| REGRESSION.HCC1395_tumor.L006 | 14 | Cycle | Base Insertion | 38477 | 1.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 14 | Cycle | Base Deletion | 38477 | 3.82 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 140 | Cycle | Base Substitution | 32554 | 63.03 | 27.00 | 26.71 | 0.29 | After |
| REGRESSION.HCC1395_tumor.L006 | 140 | Cycle | Base Insertion | 32135 | 0.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 140 | Cycle | Base Deletion | 32135 | 2.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 141 | Cycle | Base Substitution | 32447 | 74.52 | 26.00 | 26.34 | -0.34 | After |
| REGRESSION.HCC1395_tumor.L006 | 141 | Cycle | Base Insertion | 32035 | 1.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 141 | Cycle | Base Deletion | 32035 | 1.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 142 | Cycle | Base Substitution | 32368 | 69.13 | 27.00 | 26.37 | 0.63 | After |
| REGRESSION.HCC1395_tumor.L006 | 142 | Cycle | Base Insertion | 31887 | 0.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 142 | Cycle | Base Deletion | 31887 | 1.51 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 143 | Cycle | Base Substitution | 32201 | 60.49 | 27.00 | 26.35 | 0.65 | After |
| REGRESSION.HCC1395_tumor.L006 | 143 | Cycle | Base Insertion | 31714 | 0.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 143 | Cycle | Base Deletion | 31714 | 2.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 144 | Cycle | Base Substitution | 32180 | 60.72 | 27.00 | 26.40 | 0.60 | After |
| REGRESSION.HCC1395_tumor.L006 | 144 | Cycle | Base Insertion | 31722 | 0.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 144 | Cycle | Base Deletion | 31722 | 1.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 145 | Cycle | Base Substitution | 32033 | 62.59 | 27.00 | 26.54 | 0.46 | After |
| REGRESSION.HCC1395_tumor.L006 | 145 | Cycle | Base Insertion | 31519 | 0.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 145 | Cycle | Base Deletion | 31519 | 1.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 146 | Cycle | Base Substitution | 31836 | 73.14 | 26.00 | 26.13 | -0.13 | After |
| REGRESSION.HCC1395_tumor.L006 | 146 | Cycle | Base Insertion | 31407 | 0.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 146 | Cycle | Base Deletion | 31407 | 0.84 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 147 | Cycle | Base Substitution | 31810 | 76.71 | 26.00 | 26.46 | -0.46 | After |
| REGRESSION.HCC1395_tumor.L006 | 148 | Cycle | Base Substitution | 31646 | 77.22 | 26.00 | 26.29 | -0.29 | After |
| REGRESSION.HCC1395_tumor.L006 | 149 | Cycle | Base Substitution | 31589 | 76.16 | 26.00 | 26.21 | -0.21 | After |
| REGRESSION.HCC1395_tumor.L006 | 15 | Cycle | Base Substitution | 38384 | 47.39 | 28.00 | 27.94 | 0.06 | After |
| REGRESSION.HCC1395_tumor.L006 | 15 | Cycle | Base Insertion | 38384 | 1.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 15 | Cycle | Base Deletion | 38384 | 4.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 150 | Cycle | Base Substitution | 31494 | 74.93 | 26.00 | 26.43 | -0.43 | After |
| REGRESSION.HCC1395_tumor.L006 | 16 | Cycle | Base Substitution | 38503 | 35.71 | 29.00 | 28.45 | 0.55 | After |
| REGRESSION.HCC1395_tumor.L006 | 16 | Cycle | Base Insertion | 38503 | 2.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 16 | Cycle | Base Deletion | 38503 | 3.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 17 | Cycle | Base Substitution | 38410 | 33.91 | 29.00 | 28.66 | 0.34 | After |
| REGRESSION.HCC1395_tumor.L006 | 17 | Cycle | Base Insertion | 38410 | 1.42 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 17 | Cycle | Base Deletion | 38410 | 4.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 18 | Cycle | Base Substitution | 38257 | 24.37 | 30.00 | 28.38 | 1.62 | After |
| REGRESSION.HCC1395_tumor.L006 | 18 | Cycle | Base Insertion | 38257 | 3.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 18 | Cycle | Base Deletion | 38257 | 4.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 19 | Cycle | Base Substitution | 38244 | 31.94 | 30.00 | 28.31 | 1.69 | After |
| REGRESSION.HCC1395_tumor.L006 | 19 | Cycle | Base Insertion | 38244 | 1.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 19 | Cycle | Base Deletion | 38244 | 4.72 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 2 | Cycle | Base Substitution | 38500 | 88.97 | 27.00 | 27.47 | -0.47 | After |
| REGRESSION.HCC1395_tumor.L006 | 20 | Cycle | Base Substitution | 38394 | 40.16 | 29.00 | 28.51 | 0.49 | After |
| REGRESSION.HCC1395_tumor.L006 | 20 | Cycle | Base Insertion | 38394 | 2.81 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 20 | Cycle | Base Deletion | 38394 | 4.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 21 | Cycle | Base Substitution | 38361 | 34.83 | 29.00 | 28.79 | 0.21 | After |
| REGRESSION.HCC1395_tumor.L006 | 21 | Cycle | Base Insertion | 38361 | 1.37 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 21 | Cycle | Base Deletion | 38361 | 3.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 22 | Cycle | Base Substitution | 38297 | 25.82 | 30.00 | 28.68 | 1.32 | After |
| REGRESSION.HCC1395_tumor.L006 | 22 | Cycle | Base Insertion | 38297 | 1.44 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 22 | Cycle | Base Deletion | 38297 | 4.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 23 | Cycle | Base Substitution | 38287 | 15.55 | 30.00 | 28.63 | 1.37 | After |
| REGRESSION.HCC1395_tumor.L006 | 23 | Cycle | Base Insertion | 38287 | 1.48 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 23 | Cycle | Base Deletion | 38287 | 3.31 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 24 | Cycle | Base Substitution | 38292 | 21.68 | 31.00 | 29.26 | 1.74 | After |
| REGRESSION.HCC1395_tumor.L006 | 24 | Cycle | Base Insertion | 38292 | 1.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 24 | Cycle | Base Deletion | 38292 | 2.98 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 25 | Cycle | Base Substitution | 38301 | 31.77 | 30.00 | 28.63 | 1.37 | After |
| REGRESSION.HCC1395_tumor.L006 | 25 | Cycle | Base Insertion | 38301 | 2.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 25 | Cycle | Base Deletion | 38301 | 2.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 26 | Cycle | Base Substitution | 38351 | 32.74 | 30.00 | 28.07 | 1.93 | After |
| REGRESSION.HCC1395_tumor.L006 | 26 | Cycle | Base Insertion | 38351 | 2.61 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 26 | Cycle | Base Deletion | 38351 | 3.18 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 27 | Cycle | Base Substitution | 38251 | 35.74 | 29.00 | 27.68 | 1.32 | After |
| REGRESSION.HCC1395_tumor.L006 | 27 | Cycle | Base Insertion | 38249 | 2.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 27 | Cycle | Base Deletion | 38249 | 3.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 28 | Cycle | Base Substitution | 38357 | 50.88 | 29.00 | 28.35 | 0.65 | After |
| REGRESSION.HCC1395_tumor.L006 | 28 | Cycle | Base Insertion | 38357 | 2.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 28 | Cycle | Base Deletion | 38357 | 3.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 29 | Cycle | Base Substitution | 38214 | 45.88 | 28.00 | 27.78 | 0.22 | After |
| REGRESSION.HCC1395_tumor.L006 | 29 | Cycle | Base Insertion | 38211 | 1.72 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 29 | Cycle | Base Deletion | 38211 | 5.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 3 | Cycle | Base Substitution | 38614 | 102.72 | 26.00 | 27.54 | -1.54 | After |
| REGRESSION.HCC1395_tumor.L006 | 30 | Cycle | Base Substitution | 38328 | 39.72 | 29.00 | 28.28 | 0.72 | After |
| REGRESSION.HCC1395_tumor.L006 | 30 | Cycle | Base Insertion | 38323 | 1.55 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 30 | Cycle | Base Deletion | 38323 | 3.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 31 | Cycle | Base Substitution | 38380 | 39.92 | 29.00 | 28.57 | 0.43 | After |
| REGRESSION.HCC1395_tumor.L006 | 31 | Cycle | Base Insertion | 38377 | 1.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 31 | Cycle | Base Deletion | 38377 | 3.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 32 | Cycle | Base Substitution | 38078 | 55.80 | 28.00 | 27.46 | 0.54 | After |
| REGRESSION.HCC1395_tumor.L006 | 32 | Cycle | Base Insertion | 38075 | 3.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 32 | Cycle | Base Deletion | 38075 | 3.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 33 | Cycle | Base Substitution | 38183 | 33.70 | 29.00 | 27.78 | 1.22 | After |
| REGRESSION.HCC1395_tumor.L006 | 33 | Cycle | Base Insertion | 38181 | 3.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 33 | Cycle | Base Deletion | 38181 | 3.73 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 34 | Cycle | Base Substitution | 38198 | 37.93 | 29.00 | 27.63 | 1.37 | After |
| REGRESSION.HCC1395_tumor.L006 | 34 | Cycle | Base Insertion | 38194 | 4.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 34 | Cycle | Base Deletion | 38194 | 4.36 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 35 | Cycle | Base Substitution | 38177 | 43.89 | 29.00 | 27.67 | 1.33 | After |
| REGRESSION.HCC1395_tumor.L006 | 35 | Cycle | Base Insertion | 38173 | 2.47 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 35 | Cycle | Base Deletion | 38173 | 3.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 36 | Cycle | Base Substitution | 38250 | 37.92 | 29.00 | 27.93 | 1.07 | After |
| REGRESSION.HCC1395_tumor.L006 | 36 | Cycle | Base Insertion | 38246 | 2.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 36 | Cycle | Base Deletion | 38246 | 4.56 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 37 | Cycle | Base Substitution | 38212 | 31.18 | 30.00 | 28.01 | 1.99 | After |
| REGRESSION.HCC1395_tumor.L006 | 37 | Cycle | Base Insertion | 38208 | 2.17 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 37 | Cycle | Base Deletion | 38208 | 4.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 38 | Cycle | Base Substitution | 38220 | 42.78 | 29.00 | 28.21 | 0.79 | After |
| REGRESSION.HCC1395_tumor.L006 | 38 | Cycle | Base Insertion | 38217 | 2.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 38 | Cycle | Base Deletion | 38217 | 4.07 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 39 | Cycle | Base Substitution | 38169 | 38.80 | 29.00 | 28.03 | 0.97 | After |
| REGRESSION.HCC1395_tumor.L006 | 39 | Cycle | Base Insertion | 38168 | 2.30 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 39 | Cycle | Base Deletion | 38168 | 3.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 4 | Cycle | Base Substitution | 38636 | 83.22 | 27.00 | 27.05 | -0.05 | After |
| REGRESSION.HCC1395_tumor.L006 | 40 | Cycle | Base Substitution | 38084 | 32.82 | 30.00 | 28.14 | 1.86 | After |
| REGRESSION.HCC1395_tumor.L006 | 40 | Cycle | Base Insertion | 38081 | 2.48 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 40 | Cycle | Base Deletion | 38081 | 3.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 41 | Cycle | Base Substitution | 38238 | 36.24 | 29.00 | 27.70 | 1.30 | After |
| REGRESSION.HCC1395_tumor.L006 | 41 | Cycle | Base Insertion | 38234 | 1.96 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 41 | Cycle | Base Deletion | 38234 | 4.55 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 42 | Cycle | Base Substitution | 38018 | 40.36 | 29.00 | 27.72 | 1.28 | After |
| REGRESSION.HCC1395_tumor.L006 | 42 | Cycle | Base Insertion | 38015 | 3.07 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 42 | Cycle | Base Deletion | 38015 | 5.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 43 | Cycle | Base Substitution | 38117 | 53.25 | 28.00 | 27.50 | 0.50 | After |
| REGRESSION.HCC1395_tumor.L006 | 43 | Cycle | Base Insertion | 38115 | 2.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 43 | Cycle | Base Deletion | 38115 | 4.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 44 | Cycle | Base Substitution | 38136 | 44.18 | 29.00 | 27.71 | 1.29 | After |
| REGRESSION.HCC1395_tumor.L006 | 44 | Cycle | Base Insertion | 38136 | 1.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 44 | Cycle | Base Deletion | 38136 | 3.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 45 | Cycle | Base Substitution | 38073 | 45.54 | 28.00 | 27.83 | 0.17 | After |
| REGRESSION.HCC1395_tumor.L006 | 45 | Cycle | Base Insertion | 38069 | 4.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 45 | Cycle | Base Deletion | 38069 | 4.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 46 | Cycle | Base Substitution | 38099 | 45.62 | 28.00 | 27.57 | 0.43 | After |
| REGRESSION.HCC1395_tumor.L006 | 46 | Cycle | Base Insertion | 38092 | 1.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 46 | Cycle | Base Deletion | 38092 | 3.57 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 47 | Cycle | Base Substitution | 38143 | 42.42 | 29.00 | 27.82 | 1.18 | After |
| REGRESSION.HCC1395_tumor.L006 | 47 | Cycle | Base Insertion | 38134 | 2.77 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 47 | Cycle | Base Deletion | 38134 | 3.37 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 48 | Cycle | Base Substitution | 38070 | 40.99 | 29.00 | 27.75 | 1.25 | After |
| REGRESSION.HCC1395_tumor.L006 | 48 | Cycle | Base Insertion | 38060 | 1.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 48 | Cycle | Base Deletion | 38060 | 3.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 49 | Cycle | Base Substitution | 38135 | 39.76 | 29.00 | 27.64 | 1.36 | After |
| REGRESSION.HCC1395_tumor.L006 | 49 | Cycle | Base Insertion | 38128 | 1.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 49 | Cycle | Base Deletion | 38128 | 4.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 5 | Cycle | Base Substitution | 38521 | 40.52 | 29.00 | 27.70 | 1.30 | After |
| REGRESSION.HCC1395_tumor.L006 | 5 | Cycle | Base Insertion | 38521 | 1.73 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 5 | Cycle | Base Deletion | 38521 | 1.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 50 | Cycle | Base Substitution | 38005 | 31.61 | 30.00 | 28.13 | 1.87 | After |
| REGRESSION.HCC1395_tumor.L006 | 50 | Cycle | Base Insertion | 37994 | 1.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 50 | Cycle | Base Deletion | 37994 | 3.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 51 | Cycle | Base Substitution | 38007 | 65.34 | 28.00 | 27.70 | 0.30 | After |
| REGRESSION.HCC1395_tumor.L006 | 51 | Cycle | Base Insertion | 37993 | 2.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 51 | Cycle | Base Deletion | 37993 | 3.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 52 | Cycle | Base Substitution | 38037 | 43.59 | 29.00 | 27.64 | 1.36 | After |
| REGRESSION.HCC1395_tumor.L006 | 52 | Cycle | Base Insertion | 38017 | 2.21 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 52 | Cycle | Base Deletion | 38017 | 3.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 53 | Cycle | Base Substitution | 38136 | 44.64 | 28.00 | 27.44 | 0.56 | After |
| REGRESSION.HCC1395_tumor.L006 | 53 | Cycle | Base Insertion | 38109 | 1.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 53 | Cycle | Base Deletion | 38109 | 3.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 54 | Cycle | Base Substitution | 37968 | 41.46 | 29.00 | 27.85 | 1.15 | After |
| REGRESSION.HCC1395_tumor.L006 | 54 | Cycle | Base Insertion | 37937 | 3.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 54 | Cycle | Base Deletion | 37937 | 3.61 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 55 | Cycle | Base Substitution | 38007 | 37.43 | 29.00 | 27.70 | 1.30 | After |
| REGRESSION.HCC1395_tumor.L006 | 55 | Cycle | Base Insertion | 37975 | 1.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 55 | Cycle | Base Deletion | 37975 | 3.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 56 | Cycle | Base Substitution | 38135 | 63.51 | 28.00 | 27.54 | 0.46 | After |
| REGRESSION.HCC1395_tumor.L006 | 56 | Cycle | Base Insertion | 38094 | 2.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 56 | Cycle | Base Deletion | 38094 | 3.37 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 57 | Cycle | Base Substitution | 37894 | 54.63 | 28.00 | 27.83 | 0.17 | After |
| REGRESSION.HCC1395_tumor.L006 | 57 | Cycle | Base Insertion | 37858 | 2.10 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 57 | Cycle | Base Deletion | 37858 | 3.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 58 | Cycle | Base Substitution | 37918 | 37.64 | 29.00 | 27.81 | 1.19 | After |
| REGRESSION.HCC1395_tumor.L006 | 58 | Cycle | Base Insertion | 37879 | 2.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 58 | Cycle | Base Deletion | 37879 | 3.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 59 | Cycle | Base Substitution | 38019 | 49.38 | 28.00 | 27.71 | 0.29 | After |
| REGRESSION.HCC1395_tumor.L006 | 59 | Cycle | Base Insertion | 37964 | 1.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 59 | Cycle | Base Deletion | 37964 | 3.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 6 | Cycle | Base Substitution | 38631 | 41.63 | 29.00 | 28.09 | 0.91 | After |
| REGRESSION.HCC1395_tumor.L006 | 6 | Cycle | Base Insertion | 38631 | 1.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 6 | Cycle | Base Deletion | 38631 | 1.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 60 | Cycle | Base Substitution | 37845 | 49.16 | 28.00 | 27.47 | 0.53 | After |
| REGRESSION.HCC1395_tumor.L006 | 60 | Cycle | Base Insertion | 37782 | 1.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 60 | Cycle | Base Deletion | 37782 | 3.61 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 61 | Cycle | Base Substitution | 37925 | 58.09 | 28.00 | 27.85 | 0.15 | After |
| REGRESSION.HCC1395_tumor.L006 | 61 | Cycle | Base Insertion | 37851 | 1.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 61 | Cycle | Base Deletion | 37851 | 4.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 62 | Cycle | Base Substitution | 37922 | 47.14 | 29.00 | 28.17 | 0.83 | After |
| REGRESSION.HCC1395_tumor.L006 | 62 | Cycle | Base Insertion | 37846 | 2.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 62 | Cycle | Base Deletion | 37846 | 3.38 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 63 | Cycle | Base Substitution | 37848 | 57.01 | 28.00 | 27.30 | 0.70 | After |
| REGRESSION.HCC1395_tumor.L006 | 63 | Cycle | Base Insertion | 37770 | 1.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 63 | Cycle | Base Deletion | 37770 | 2.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 64 | Cycle | Base Substitution | 37871 | 40.44 | 29.00 | 27.66 | 1.34 | After |
| REGRESSION.HCC1395_tumor.L006 | 64 | Cycle | Base Insertion | 37788 | 1.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 64 | Cycle | Base Deletion | 37788 | 2.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 65 | Cycle | Base Substitution | 37784 | 53.31 | 28.00 | 27.53 | 0.47 | After |
| REGRESSION.HCC1395_tumor.L006 | 65 | Cycle | Base Insertion | 37710 | 1.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 65 | Cycle | Base Deletion | 37710 | 2.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 66 | Cycle | Base Substitution | 37758 | 37.30 | 29.00 | 28.19 | 0.81 | After |
| REGRESSION.HCC1395_tumor.L006 | 66 | Cycle | Base Insertion | 37666 | 2.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 66 | Cycle | Base Deletion | 37666 | 3.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 67 | Cycle | Base Substitution | 37724 | 62.13 | 28.00 | 27.57 | 0.43 | After |
| REGRESSION.HCC1395_tumor.L006 | 67 | Cycle | Base Insertion | 37631 | 2.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 67 | Cycle | Base Deletion | 37631 | 3.72 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 68 | Cycle | Base Substitution | 37723 | 44.49 | 28.00 | 27.37 | 0.63 | After |
| REGRESSION.HCC1395_tumor.L006 | 68 | Cycle | Base Insertion | 37625 | 1.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 68 | Cycle | Base Deletion | 37625 | 3.31 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 69 | Cycle | Base Substitution | 37852 | 39.53 | 29.00 | 27.44 | 1.56 | After |
| REGRESSION.HCC1395_tumor.L006 | 69 | Cycle | Base Insertion | 37750 | 2.48 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 69 | Cycle | Base Deletion | 37750 | 4.09 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 7 | Cycle | Base Substitution | 38397 | 39.20 | 29.00 | 27.57 | 1.43 | After |
| REGRESSION.HCC1395_tumor.L006 | 7 | Cycle | Base Insertion | 38397 | 0.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 7 | Cycle | Base Deletion | 38397 | 1.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 70 | Cycle | Base Substitution | 37543 | 45.38 | 28.00 | 27.38 | 0.62 | After |
| REGRESSION.HCC1395_tumor.L006 | 70 | Cycle | Base Insertion | 37438 | 1.07 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 70 | Cycle | Base Deletion | 37438 | 3.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 71 | Cycle | Base Substitution | 37576 | 49.36 | 28.00 | 27.70 | 0.30 | After |
| REGRESSION.HCC1395_tumor.L006 | 71 | Cycle | Base Insertion | 37453 | 1.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 71 | Cycle | Base Deletion | 37453 | 3.55 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 72 | Cycle | Base Substitution | 37535 | 40.59 | 29.00 | 28.00 | 1.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 72 | Cycle | Base Insertion | 37410 | 1.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 72 | Cycle | Base Deletion | 37410 | 3.44 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 73 | Cycle | Base Substitution | 37549 | 54.30 | 28.00 | 27.26 | 0.74 | After |
| REGRESSION.HCC1395_tumor.L006 | 73 | Cycle | Base Insertion | 37410 | 2.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 73 | Cycle | Base Deletion | 37410 | 4.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 74 | Cycle | Base Substitution | 37437 | 46.32 | 28.00 | 27.45 | 0.55 | After |
| REGRESSION.HCC1395_tumor.L006 | 74 | Cycle | Base Insertion | 37292 | 2.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 74 | Cycle | Base Deletion | 37292 | 4.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 75 | Cycle | Base Substitution | 37459 | 52.60 | 28.00 | 27.24 | 0.76 | After |
| REGRESSION.HCC1395_tumor.L006 | 75 | Cycle | Base Insertion | 37314 | 2.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 75 | Cycle | Base Deletion | 37314 | 3.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 76 | Cycle | Base Substitution | 37435 | 55.16 | 28.00 | 27.48 | 0.52 | After |
| REGRESSION.HCC1395_tumor.L006 | 76 | Cycle | Base Insertion | 37280 | 2.37 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 76 | Cycle | Base Deletion | 37280 | 3.95 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 77 | Cycle | Base Substitution | 37341 | 55.97 | 28.00 | 27.28 | 0.72 | After |
| REGRESSION.HCC1395_tumor.L006 | 77 | Cycle | Base Insertion | 37188 | 2.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 77 | Cycle | Base Deletion | 37188 | 4.29 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 78 | Cycle | Base Substitution | 37328 | 58.81 | 28.00 | 27.23 | 0.77 | After |
| REGRESSION.HCC1395_tumor.L006 | 78 | Cycle | Base Insertion | 37155 | 1.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 78 | Cycle | Base Deletion | 37155 | 3.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 79 | Cycle | Base Substitution | 37337 | 68.07 | 27.00 | 27.27 | -0.27 | After |
| REGRESSION.HCC1395_tumor.L006 | 79 | Cycle | Base Insertion | 37162 | 1.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 79 | Cycle | Base Deletion | 37162 | 3.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 8 | Cycle | Base Substitution | 38428 | 55.80 | 28.00 | 27.50 | 0.50 | After |
| REGRESSION.HCC1395_tumor.L006 | 8 | Cycle | Base Insertion | 38428 | 2.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 8 | Cycle | Base Deletion | 38428 | 1.84 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 80 | Cycle | Base Substitution | 37345 | 49.09 | 28.00 | 27.07 | 0.93 | After |
| REGRESSION.HCC1395_tumor.L006 | 80 | Cycle | Base Insertion | 37153 | 1.51 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 80 | Cycle | Base Deletion | 37153 | 3.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 81 | Cycle | Base Substitution | 37124 | 54.09 | 28.00 | 27.29 | 0.71 | After |
| REGRESSION.HCC1395_tumor.L006 | 81 | Cycle | Base Insertion | 36919 | 1.47 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 81 | Cycle | Base Deletion | 36919 | 2.21 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 82 | Cycle | Base Substitution | 37157 | 53.60 | 28.00 | 27.34 | 0.66 | After |
| REGRESSION.HCC1395_tumor.L006 | 82 | Cycle | Base Insertion | 36947 | 1.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 82 | Cycle | Base Deletion | 36947 | 2.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 83 | Cycle | Base Substitution | 37079 | 51.88 | 28.00 | 27.15 | 0.85 | After |
| REGRESSION.HCC1395_tumor.L006 | 83 | Cycle | Base Insertion | 36844 | 1.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 83 | Cycle | Base Deletion | 36844 | 3.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 84 | Cycle | Base Substitution | 37154 | 60.77 | 28.00 | 27.26 | 0.74 | After |
| REGRESSION.HCC1395_tumor.L006 | 84 | Cycle | Base Insertion | 36920 | 1.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 84 | Cycle | Base Deletion | 36920 | 3.09 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 85 | Cycle | Base Substitution | 36973 | 66.83 | 27.00 | 27.15 | -0.15 | After |
| REGRESSION.HCC1395_tumor.L006 | 85 | Cycle | Base Insertion | 36749 | 1.57 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 85 | Cycle | Base Deletion | 36749 | 2.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 86 | Cycle | Base Substitution | 36981 | 69.01 | 27.00 | 27.26 | -0.26 | After |
| REGRESSION.HCC1395_tumor.L006 | 86 | Cycle | Base Insertion | 36767 | 2.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 86 | Cycle | Base Deletion | 36767 | 3.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 87 | Cycle | Base Substitution | 36897 | 48.20 | 28.00 | 27.02 | 0.98 | After |
| REGRESSION.HCC1395_tumor.L006 | 87 | Cycle | Base Insertion | 36669 | 2.17 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 87 | Cycle | Base Deletion | 36669 | 2.79 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 88 | Cycle | Base Substitution | 36758 | 63.27 | 28.00 | 27.02 | 0.98 | After |
| REGRESSION.HCC1395_tumor.L006 | 88 | Cycle | Base Insertion | 36519 | 1.07 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 88 | Cycle | Base Deletion | 36519 | 3.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 89 | Cycle | Base Substitution | 36811 | 66.36 | 27.00 | 27.03 | -0.03 | After |
| REGRESSION.HCC1395_tumor.L006 | 89 | Cycle | Base Insertion | 36565 | 2.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 89 | Cycle | Base Deletion | 36565 | 3.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 9 | Cycle | Base Substitution | 38496 | 52.47 | 28.00 | 27.47 | 0.53 | After |
| REGRESSION.HCC1395_tumor.L006 | 9 | Cycle | Base Insertion | 38496 | 1.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 9 | Cycle | Base Deletion | 38496 | 2.55 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 90 | Cycle | Base Substitution | 36803 | 61.49 | 28.00 | 27.02 | 0.98 | After |
| REGRESSION.HCC1395_tumor.L006 | 90 | Cycle | Base Insertion | 36553 | 1.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 90 | Cycle | Base Deletion | 36553 | 3.56 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 91 | Cycle | Base Substitution | 36795 | 65.74 | 27.00 | 27.07 | -0.07 | After |
| REGRESSION.HCC1395_tumor.L006 | 91 | Cycle | Base Insertion | 36542 | 2.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 91 | Cycle | Base Deletion | 36542 | 3.30 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 92 | Cycle | Base Substitution | 36536 | 63.96 | 27.00 | 26.84 | 0.16 | After |
| REGRESSION.HCC1395_tumor.L006 | 92 | Cycle | Base Insertion | 36254 | 1.36 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 92 | Cycle | Base Deletion | 36254 | 2.81 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 93 | Cycle | Base Substitution | 36352 | 64.56 | 27.00 | 26.99 | 0.01 | After |
| REGRESSION.HCC1395_tumor.L006 | 93 | Cycle | Base Insertion | 36073 | 1.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 93 | Cycle | Base Deletion | 36073 | 2.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 94 | Cycle | Base Substitution | 36469 | 71.13 | 27.00 | 26.84 | 0.16 | After |
| REGRESSION.HCC1395_tumor.L006 | 94 | Cycle | Base Insertion | 36181 | 1.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 94 | Cycle | Base Deletion | 36181 | 3.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 95 | Cycle | Base Substitution | 36273 | 50.77 | 28.00 | 27.20 | 0.80 | After |
| REGRESSION.HCC1395_tumor.L006 | 95 | Cycle | Base Insertion | 35961 | 1.73 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 95 | Cycle | Base Deletion | 35961 | 3.38 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 96 | Cycle | Base Substitution | 36231 | 58.18 | 28.00 | 27.07 | 0.93 | After |
| REGRESSION.HCC1395_tumor.L006 | 96 | Cycle | Base Insertion | 35927 | 1.96 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 96 | Cycle | Base Deletion | 35927 | 3.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 97 | Cycle | Base Substitution | 36235 | 56.12 | 27.00 | 26.88 | 0.12 | After |
| REGRESSION.HCC1395_tumor.L006 | 97 | Cycle | Base Insertion | 35936 | 1.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 97 | Cycle | Base Deletion | 35936 | 4.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 98 | Cycle | Base Substitution | 36128 | 66.13 | 27.00 | 26.78 | 0.22 | After |
| REGRESSION.HCC1395_tumor.L006 | 98 | Cycle | Base Insertion | 35835 | 1.96 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 98 | Cycle | Base Deletion | 35835 | 3.48 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 99 | Cycle | Base Substitution | 36054 | 62.34 | 28.00 | 27.08 | 0.92 | After |
| REGRESSION.HCC1395_tumor.L006 | 99 | Cycle | Base Insertion | 35765 | 1.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 99 | Cycle | Base Deletion | 35765 | 3.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 10 | QualityScore | Base Substitution | 14608 | 1588.82 | 10.00 | 10.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 11 | QualityScore | Base Substitution | 14300 | 1017.54 | 11.00 | 11.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 12 | QualityScore | Base Substitution | 21797 | 1264.48 | 12.00 | 12.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 13 | QualityScore | Base Substitution | 13125 | 248.15 | 16.00 | 13.00 | 3.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 14 | QualityScore | Base Substitution | 10582 | 159.70 | 17.00 | 14.00 | 3.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 15 | QualityScore | Base Substitution | 19019 | 8.48 | 22.00 | 15.00 | 7.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 16 | QualityScore | Base Substitution | 5871 | 0.29 | 20.00 | 16.00 | 4.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 17 | QualityScore | Base Substitution | 14223 | 2.64 | 22.00 | 17.00 | 5.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 22 | QualityScore | Base Substitution | 10163 | 5.83 | 24.00 | 22.00 | 2.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 23 | QualityScore | Base Substitution | 36513 | 225.36 | 22.00 | 23.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 24 | QualityScore | Base Substitution | 129402 | 638.95 | 23.00 | 24.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 25 | QualityScore | Base Substitution | 63242 | 209.57 | 25.00 | 25.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 26 | QualityScore | Base Substitution | 101856 | 150.81 | 28.00 | 26.00 | 2.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 28 | QualityScore | Base Substitution | 10048 | 0.89 | 29.00 | 28.00 | 1.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 29 | QualityScore | Base Substitution | 70172 | 134.88 | 28.00 | 29.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 30 | QualityScore | Base Substitution | 3161494 | 1873.68 | 32.00 | 30.00 | 2.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 31 | QualityScore | Base Substitution | 2181337 | 824.22 | 34.00 | 31.00 | 3.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 32 | QualityScore | Base Substitution | 4530810 | 1056.51 | 36.00 | 32.00 | 4.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 33 | QualityScore | Base Substitution | 430111 | 62.65 | 36.00 | 33.00 | 3.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 45 | QualityScore | Base Insertion | 10904356 | 489.19 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 45 | QualityScore | Base Deletion | 10904356 | 977.80 | 41.00 | 45.00 | -4.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 8 | QualityScore | Base Substitution | 1614 | 282.57 | 8.00 | 8.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L006 | 9 | QualityScore | Base Substitution | 64069 | 8553.21 | 9.00 | 9.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | AA | Context | Base Substitution | 825444 | 1789.05 | 27.00 | 25.59 | 1.41 | After |
| REGRESSION.HCC1395_tumor.L007 | AAA | Context | Base Insertion | 292857 | 57.64 | 43.00 | 45.00 | -2.00 | After |
| REGRESSION.HCC1395_tumor.L007 | AAA | Context | Base Deletion | 292857 | 188.46 | 37.00 | 45.00 | -8.00 | After |
| REGRESSION.HCC1395_tumor.L007 | AAC | Context | Base Insertion | 131145 | 3.81 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | AAC | Context | Base Deletion | 131145 | 8.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | AAG | Context | Base Insertion | 195507 | 4.88 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | AAG | Context | Base Deletion | 195507 | 9.09 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | AAT | Context | Base Insertion | 172172 | 0.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | AAT | Context | Base Deletion | 172172 | 15.66 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L007 | AC | Context | Base Substitution | 528153 | 1863.82 | 25.00 | 24.70 | 0.30 | After |
| REGRESSION.HCC1395_tumor.L007 | ACA | Context | Base Insertion | 203172 | 17.81 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L007 | ACA | Context | Base Deletion | 203172 | 36.16 | 43.00 | 45.00 | -2.00 | After |
| REGRESSION.HCC1395_tumor.L007 | ACC | Context | Base Insertion | 145992 | 7.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | ACC | Context | Base Deletion | 145992 | 4.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | ACG | Context | Base Insertion | 30606 | 0.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | ACG | Context | Base Deletion | 30606 | 1.95 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | ACT | Context | Base Insertion | 157301 | 0.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | ACT | Context | Base Deletion | 157301 | 12.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | AG | Context | Base Substitution | 792395 | 640.00 | 31.00 | 28.76 | 2.24 | After |
| REGRESSION.HCC1395_tumor.L007 | AGA | Context | Base Insertion | 219838 | 4.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | AGA | Context | Base Deletion | 219838 | 10.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | AGC | Context | Base Insertion | 190468 | 1.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | AGC | Context | Base Deletion | 190468 | 9.57 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | AGG | Context | Base Insertion | 225722 | 9.42 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | AGG | Context | Base Deletion | 225722 | 7.57 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | AGT | Context | Base Insertion | 152816 | 3.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | AGT | Context | Base Deletion | 152816 | 4.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | AT | Context | Base Substitution | 597436 | 599.75 | 30.00 | 27.61 | 2.39 | After |
| REGRESSION.HCC1395_tumor.L007 | ATA | Context | Base Insertion | 133244 | 6.61 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | ATA | Context | Base Deletion | 133244 | 6.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | ATC | Context | Base Insertion | 119996 | 2.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | ATC | Context | Base Deletion | 119996 | 9.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | ATG | Context | Base Insertion | 173260 | 1.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | ATG | Context | Base Deletion | 173260 | 1.46 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | ATT | Context | Base Insertion | 181883 | 4.81 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | ATT | Context | Base Deletion | 181883 | 8.61 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | CA | Context | Base Substitution | 850025 | 1802.06 | 27.00 | 25.76 | 1.24 | After |
| REGRESSION.HCC1395_tumor.L007 | CAA | Context | Base Insertion | 169671 | 5.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | CAA | Context | Base Deletion | 169671 | 11.79 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | CAC | Context | Base Insertion | 182277 | 20.92 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L007 | CAC | Context | Base Deletion | 182277 | 33.92 | 43.00 | 45.00 | -2.00 | After |
| REGRESSION.HCC1395_tumor.L007 | CAG | Context | Base Insertion | 289988 | 5.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | CAG | Context | Base Deletion | 289988 | 11.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | CAT | Context | Base Insertion | 169466 | 7.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | CAT | Context | Base Deletion | 169466 | 4.38 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | CC | Context | Base Substitution | 759900 | 2360.85 | 25.00 | 24.67 | 0.33 | After |
| REGRESSION.HCC1395_tumor.L007 | CCA | Context | Base Insertion | 243063 | 5.02 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | CCA | Context | Base Deletion | 243063 | 7.42 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | CCC | Context | Base Insertion | 210183 | 10.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | CCC | Context | Base Deletion | 210183 | 18.51 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L007 | CCG | Context | Base Insertion | 53913 | 3.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | CCG | Context | Base Deletion | 53913 | 6.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | CCT | Context | Base Insertion | 242020 | 2.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | CCT | Context | Base Deletion | 242020 | 9.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | CG | Context | Base Substitution | 160702 | 521.27 | 25.00 | 24.96 | 0.04 | After |
| REGRESSION.HCC1395_tumor.L007 | CGA | Context | Base Insertion | 56137 | 0.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | CGA | Context | Base Deletion | 56137 | 0.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | CGC | Context | Base Insertion | 80706 | 1.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | CGC | Context | Base Deletion | 80706 | 9.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | CGG | Context | Base Insertion | 98187 | 4.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | CGG | Context | Base Deletion | 98187 | 8.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | CGT | Context | Base Insertion | 62497 | 1.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | CGT | Context | Base Deletion | 62497 | 1.37 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | CT | Context | Base Substitution | 834813 | 363.24 | 33.00 | 29.69 | 3.31 | After |
| REGRESSION.HCC1395_tumor.L007 | CTA | Context | Base Insertion | 95740 | 0.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | CTA | Context | Base Deletion | 95740 | 6.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | CTC | Context | Base Insertion | 201695 | 6.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | CTC | Context | Base Deletion | 201695 | 21.22 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L007 | CTG | Context | Base Insertion | 290977 | 2.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | CTG | Context | Base Deletion | 290977 | 14.18 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | CTT | Context | Base Insertion | 208291 | 8.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | CTT | Context | Base Deletion | 208291 | 10.09 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | GA | Context | Base Substitution | 697788 | 1027.28 | 28.00 | 26.56 | 1.44 | After |
| REGRESSION.HCC1395_tumor.L007 | GAA | Context | Base Insertion | 207369 | 4.88 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | GAA | Context | Base Deletion | 207369 | 8.72 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | GAC | Context | Base Insertion | 117953 | 3.29 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | GAC | Context | Base Deletion | 117953 | 5.99 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | GAG | Context | Base Insertion | 205092 | 1.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | GAG | Context | Base Deletion | 205092 | 10.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | GAT | Context | Base Insertion | 124787 | 0.98 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | GAT | Context | Base Deletion | 124787 | 2.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | GC | Context | Base Substitution | 658492 | 1468.72 | 26.00 | 25.99 | 0.01 | After |
| REGRESSION.HCC1395_tumor.L007 | GCA | Context | Base Insertion | 202749 | 5.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | GCA | Context | Base Deletion | 202749 | 4.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | GCC | Context | Base Insertion | 197893 | 2.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | GCC | Context | Base Deletion | 197893 | 12.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | GCG | Context | Base Insertion | 49184 | 2.72 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | GCG | Context | Base Deletion | 49184 | 7.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | GCT | Context | Base Insertion | 208536 | 2.47 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | GCT | Context | Base Deletion | 208536 | 5.86 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | GG | Context | Base Substitution | 785979 | 756.42 | 30.00 | 27.73 | 2.27 | After |
| REGRESSION.HCC1395_tumor.L007 | GGA | Context | Base Insertion | 213211 | 18.35 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L007 | GGA | Context | Base Deletion | 213211 | 16.15 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L007 | GGC | Context | Base Insertion | 194842 | 2.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | GGC | Context | Base Deletion | 194842 | 6.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | GGG | Context | Base Insertion | 217429 | 14.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | GGG | Context | Base Deletion | 217429 | 29.96 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L007 | GGT | Context | Base Insertion | 157790 | 3.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | GGT | Context | Base Deletion | 157790 | 3.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | GT | Context | Base Substitution | 585646 | 965.45 | 28.00 | 26.94 | 1.06 | After |
| REGRESSION.HCC1395_tumor.L007 | GTA | Context | Base Insertion | 100750 | 1.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | GTA | Context | Base Deletion | 100750 | 1.57 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | GTC | Context | Base Insertion | 125799 | 2.26 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | GTC | Context | Base Deletion | 125799 | 4.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | GTG | Context | Base Insertion | 198837 | 16.76 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L007 | GTG | Context | Base Deletion | 198837 | 31.08 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L007 | GTT | Context | Base Insertion | 147811 | 2.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | GTT | Context | Base Deletion | 147811 | 11.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | TA | Context | Base Substitution | 479827 | 1195.75 | 26.00 | 25.01 | 0.99 | After |
| REGRESSION.HCC1395_tumor.L007 | TAA | Context | Base Insertion | 148628 | 11.64 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | TAA | Context | Base Deletion | 148628 | 13.76 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L007 | TAC | Context | Base Insertion | 93356 | 0.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | TAC | Context | Base Deletion | 93356 | 5.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | TAG | Context | Base Insertion | 95873 | 3.64 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | TAG | Context | Base Deletion | 95873 | 1.51 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | TAT | Context | Base Insertion | 126635 | 2.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | TAT | Context | Base Deletion | 126635 | 4.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | TC | Context | Base Substitution | 644321 | 1631.86 | 26.00 | 26.15 | -0.15 | After |
| REGRESSION.HCC1395_tumor.L007 | TCA | Context | Base Insertion | 194467 | 6.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | TCA | Context | Base Deletion | 194467 | 14.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | TCC | Context | Base Insertion | 200791 | 25.86 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L007 | TCC | Context | Base Deletion | 200791 | 8.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | TCG | Context | Base Insertion | 25833 | 1.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | TCG | Context | Base Deletion | 25833 | 0.64 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | TCT | Context | Base Insertion | 221313 | 5.21 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | TCT | Context | Base Deletion | 221313 | 18.90 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L007 | TG | Context | Base Substitution | 838105 | 356.69 | 33.00 | 29.45 | 3.55 | After |
| REGRESSION.HCC1395_tumor.L007 | TGA | Context | Base Insertion | 203238 | 0.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | TGA | Context | Base Deletion | 203238 | 4.95 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | TGC | Context | Base Insertion | 188339 | 3.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | TGC | Context | Base Deletion | 188339 | 2.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | TGG | Context | Base Insertion | 238758 | 2.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | TGG | Context | Base Deletion | 238758 | 6.99 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | TGT | Context | Base Insertion | 208636 | 16.63 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L007 | TGT | Context | Base Deletion | 208636 | 33.28 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L007 | TT | Context | Base Substitution | 836539 | 904.76 | 30.00 | 28.31 | 1.69 | After |
| REGRESSION.HCC1395_tumor.L007 | TTA | Context | Base Insertion | 146516 | 8.81 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | TTA | Context | Base Deletion | 146516 | 7.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | TTC | Context | Base Insertion | 193011 | 3.64 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | TTC | Context | Base Deletion | 193011 | 10.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | TTG | Context | Base Insertion | 169082 | 1.95 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | TTG | Context | Base Deletion | 169082 | 8.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | TTT | Context | Base Insertion | 292954 | 40.61 | 43.00 | 45.00 | -2.00 | After |
| REGRESSION.HCC1395_tumor.L007 | TTT | Context | Base Deletion | 292954 | 175.84 | 38.00 | 45.00 | -7.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -1 | Cycle | Base Substitution | 38294 | 165.34 | 24.00 | 23.53 | 0.47 | After |
| REGRESSION.HCC1395_tumor.L007 | -10 | Cycle | Base Substitution | 38670 | 54.49 | 28.00 | 27.27 | 0.73 | After |
| REGRESSION.HCC1395_tumor.L007 | -10 | Cycle | Base Insertion | 38669 | 1.73 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -10 | Cycle | Base Deletion | 38669 | 3.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -100 | Cycle | Base Substitution | 36175 | 74.05 | 27.00 | 26.60 | 0.40 | After |
| REGRESSION.HCC1395_tumor.L007 | -100 | Cycle | Base Insertion | 35874 | 1.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -100 | Cycle | Base Deletion | 35874 | 4.77 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -101 | Cycle | Base Substitution | 36010 | 79.61 | 26.00 | 26.38 | -0.38 | After |
| REGRESSION.HCC1395_tumor.L007 | -101 | Cycle | Base Insertion | 35705 | 1.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -101 | Cycle | Base Deletion | 35705 | 4.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -102 | Cycle | Base Substitution | 36062 | 64.52 | 27.00 | 26.50 | 0.50 | After |
| REGRESSION.HCC1395_tumor.L007 | -102 | Cycle | Base Insertion | 35744 | 1.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -102 | Cycle | Base Deletion | 35744 | 4.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -103 | Cycle | Base Substitution | 35923 | 69.60 | 27.00 | 26.63 | 0.37 | After |
| REGRESSION.HCC1395_tumor.L007 | -103 | Cycle | Base Insertion | 35628 | 2.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -103 | Cycle | Base Deletion | 35628 | 3.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -104 | Cycle | Base Substitution | 35980 | 71.89 | 27.00 | 26.57 | 0.43 | After |
| REGRESSION.HCC1395_tumor.L007 | -104 | Cycle | Base Insertion | 35643 | 1.82 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -104 | Cycle | Base Deletion | 35643 | 4.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -105 | Cycle | Base Substitution | 35745 | 80.29 | 26.00 | 26.40 | -0.40 | After |
| REGRESSION.HCC1395_tumor.L007 | -105 | Cycle | Base Insertion | 35398 | 3.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -105 | Cycle | Base Deletion | 35398 | 3.88 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -106 | Cycle | Base Substitution | 35697 | 71.47 | 27.00 | 26.79 | 0.21 | After |
| REGRESSION.HCC1395_tumor.L007 | -106 | Cycle | Base Insertion | 35331 | 3.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -106 | Cycle | Base Deletion | 35331 | 3.31 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -107 | Cycle | Base Substitution | 35636 | 66.85 | 27.00 | 26.34 | 0.66 | After |
| REGRESSION.HCC1395_tumor.L007 | -107 | Cycle | Base Insertion | 35267 | 1.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -107 | Cycle | Base Deletion | 35267 | 3.46 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -108 | Cycle | Base Substitution | 35578 | 68.42 | 27.00 | 26.47 | 0.53 | After |
| REGRESSION.HCC1395_tumor.L007 | -108 | Cycle | Base Insertion | 35232 | 1.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -108 | Cycle | Base Deletion | 35232 | 3.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -109 | Cycle | Base Substitution | 35430 | 91.09 | 26.00 | 26.36 | -0.36 | After |
| REGRESSION.HCC1395_tumor.L007 | -109 | Cycle | Base Insertion | 35080 | 1.47 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -109 | Cycle | Base Deletion | 35080 | 2.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -11 | Cycle | Base Substitution | 38509 | 53.59 | 28.00 | 27.57 | 0.43 | After |
| REGRESSION.HCC1395_tumor.L007 | -11 | Cycle | Base Insertion | 38508 | 1.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -11 | Cycle | Base Deletion | 38508 | 2.51 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -110 | Cycle | Base Substitution | 35339 | 63.71 | 27.00 | 26.62 | 0.38 | After |
| REGRESSION.HCC1395_tumor.L007 | -110 | Cycle | Base Insertion | 35008 | 2.72 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -110 | Cycle | Base Deletion | 35008 | 3.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -111 | Cycle | Base Substitution | 35175 | 61.91 | 27.00 | 26.36 | 0.64 | After |
| REGRESSION.HCC1395_tumor.L007 | -111 | Cycle | Base Insertion | 34852 | 2.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -111 | Cycle | Base Deletion | 34852 | 3.94 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -112 | Cycle | Base Substitution | 35232 | 90.42 | 26.00 | 26.15 | -0.15 | After |
| REGRESSION.HCC1395_tumor.L007 | -112 | Cycle | Base Insertion | 34895 | 1.29 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -112 | Cycle | Base Deletion | 34895 | 3.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -113 | Cycle | Base Substitution | 35093 | 92.55 | 26.00 | 26.33 | -0.33 | After |
| REGRESSION.HCC1395_tumor.L007 | -113 | Cycle | Base Insertion | 34751 | 1.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -113 | Cycle | Base Deletion | 34751 | 2.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -114 | Cycle | Base Substitution | 35012 | 93.02 | 26.00 | 26.46 | -0.46 | After |
| REGRESSION.HCC1395_tumor.L007 | -114 | Cycle | Base Insertion | 34657 | 1.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -114 | Cycle | Base Deletion | 34657 | 3.30 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -115 | Cycle | Base Substitution | 34889 | 87.03 | 26.00 | 25.61 | 0.39 | After |
| REGRESSION.HCC1395_tumor.L007 | -115 | Cycle | Base Insertion | 34511 | 3.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -115 | Cycle | Base Deletion | 34511 | 2.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -116 | Cycle | Base Substitution | 34752 | 80.73 | 26.00 | 26.46 | -0.46 | After |
| REGRESSION.HCC1395_tumor.L007 | -116 | Cycle | Base Insertion | 34367 | 3.18 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -116 | Cycle | Base Deletion | 34367 | 2.84 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -117 | Cycle | Base Substitution | 34601 | 79.28 | 26.00 | 26.39 | -0.39 | After |
| REGRESSION.HCC1395_tumor.L007 | -117 | Cycle | Base Insertion | 34234 | 0.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -117 | Cycle | Base Deletion | 34234 | 2.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -118 | Cycle | Base Substitution | 34601 | 83.73 | 26.00 | 26.23 | -0.23 | After |
| REGRESSION.HCC1395_tumor.L007 | -118 | Cycle | Base Insertion | 34222 | 0.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -118 | Cycle | Base Deletion | 34222 | 3.26 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -119 | Cycle | Base Substitution | 34460 | 103.46 | 26.00 | 26.27 | -0.27 | After |
| REGRESSION.HCC1395_tumor.L007 | -119 | Cycle | Base Insertion | 34107 | 0.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -119 | Cycle | Base Deletion | 34107 | 3.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -12 | Cycle | Base Substitution | 38672 | 56.41 | 28.00 | 27.91 | 0.09 | After |
| REGRESSION.HCC1395_tumor.L007 | -12 | Cycle | Base Insertion | 38671 | 0.94 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -12 | Cycle | Base Deletion | 38671 | 2.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -120 | Cycle | Base Substitution | 34337 | 94.72 | 26.00 | 25.66 | 0.34 | After |
| REGRESSION.HCC1395_tumor.L007 | -120 | Cycle | Base Insertion | 33973 | 0.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -120 | Cycle | Base Deletion | 33973 | 3.30 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -121 | Cycle | Base Substitution | 34114 | 88.15 | 26.00 | 26.22 | -0.22 | After |
| REGRESSION.HCC1395_tumor.L007 | -121 | Cycle | Base Insertion | 33745 | 0.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -121 | Cycle | Base Deletion | 33745 | 3.57 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -122 | Cycle | Base Substitution | 34254 | 66.78 | 27.00 | 26.29 | 0.71 | After |
| REGRESSION.HCC1395_tumor.L007 | -122 | Cycle | Base Insertion | 33884 | 2.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -122 | Cycle | Base Deletion | 33884 | 4.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -123 | Cycle | Base Substitution | 34230 | 69.77 | 27.00 | 26.32 | 0.68 | After |
| REGRESSION.HCC1395_tumor.L007 | -123 | Cycle | Base Insertion | 33839 | 1.98 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -123 | Cycle | Base Deletion | 33839 | 3.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -124 | Cycle | Base Substitution | 34084 | 72.83 | 27.00 | 26.14 | 0.86 | After |
| REGRESSION.HCC1395_tumor.L007 | -124 | Cycle | Base Insertion | 33694 | 1.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -124 | Cycle | Base Deletion | 33694 | 3.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -125 | Cycle | Base Substitution | 33943 | 69.53 | 27.00 | 26.55 | 0.45 | After |
| REGRESSION.HCC1395_tumor.L007 | -125 | Cycle | Base Insertion | 33565 | 1.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -125 | Cycle | Base Deletion | 33565 | 2.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -126 | Cycle | Base Substitution | 33866 | 74.07 | 27.00 | 26.97 | 0.03 | After |
| REGRESSION.HCC1395_tumor.L007 | -126 | Cycle | Base Insertion | 33494 | 1.09 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -126 | Cycle | Base Deletion | 33494 | 2.38 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -127 | Cycle | Base Substitution | 33729 | 71.75 | 27.00 | 26.27 | 0.73 | After |
| REGRESSION.HCC1395_tumor.L007 | -127 | Cycle | Base Insertion | 33343 | 1.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -127 | Cycle | Base Deletion | 33343 | 2.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -128 | Cycle | Base Substitution | 33740 | 81.84 | 26.00 | 26.16 | -0.16 | After |
| REGRESSION.HCC1395_tumor.L007 | -128 | Cycle | Base Insertion | 33353 | 3.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -128 | Cycle | Base Deletion | 33353 | 3.26 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -129 | Cycle | Base Substitution | 33572 | 66.28 | 27.00 | 26.24 | 0.76 | After |
| REGRESSION.HCC1395_tumor.L007 | -129 | Cycle | Base Insertion | 33172 | 1.51 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -129 | Cycle | Base Deletion | 33172 | 1.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -13 | Cycle | Base Substitution | 38472 | 52.59 | 28.00 | 27.55 | 0.45 | After |
| REGRESSION.HCC1395_tumor.L007 | -13 | Cycle | Base Insertion | 38471 | 1.36 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -13 | Cycle | Base Deletion | 38471 | 2.88 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -130 | Cycle | Base Substitution | 33513 | 99.33 | 26.00 | 26.04 | -0.04 | After |
| REGRESSION.HCC1395_tumor.L007 | -130 | Cycle | Base Insertion | 33102 | 1.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -130 | Cycle | Base Deletion | 33102 | 1.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -131 | Cycle | Base Substitution | 33534 | 86.91 | 26.00 | 26.34 | -0.34 | After |
| REGRESSION.HCC1395_tumor.L007 | -131 | Cycle | Base Insertion | 33110 | 0.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -131 | Cycle | Base Deletion | 33110 | 1.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -132 | Cycle | Base Substitution | 33285 | 73.50 | 26.00 | 26.11 | -0.11 | After |
| REGRESSION.HCC1395_tumor.L007 | -132 | Cycle | Base Insertion | 32853 | 0.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -132 | Cycle | Base Deletion | 32853 | 1.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -133 | Cycle | Base Substitution | 33275 | 72.74 | 26.00 | 25.98 | 0.02 | After |
| REGRESSION.HCC1395_tumor.L007 | -133 | Cycle | Base Insertion | 32858 | 0.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -133 | Cycle | Base Deletion | 32858 | 2.18 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -134 | Cycle | Base Substitution | 33173 | 76.42 | 26.00 | 26.12 | -0.12 | After |
| REGRESSION.HCC1395_tumor.L007 | -134 | Cycle | Base Insertion | 32730 | 2.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -134 | Cycle | Base Deletion | 32730 | 1.95 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -135 | Cycle | Base Substitution | 33031 | 79.13 | 26.00 | 26.17 | -0.17 | After |
| REGRESSION.HCC1395_tumor.L007 | -135 | Cycle | Base Insertion | 32606 | 0.29 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -135 | Cycle | Base Deletion | 32606 | 1.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -136 | Cycle | Base Substitution | 32906 | 72.79 | 26.00 | 26.17 | -0.17 | After |
| REGRESSION.HCC1395_tumor.L007 | -136 | Cycle | Base Insertion | 32466 | 1.18 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -136 | Cycle | Base Deletion | 32466 | 2.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -137 | Cycle | Base Substitution | 32825 | 74.90 | 26.00 | 26.27 | -0.27 | After |
| REGRESSION.HCC1395_tumor.L007 | -137 | Cycle | Base Insertion | 32373 | 2.61 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -137 | Cycle | Base Deletion | 32373 | 1.86 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -138 | Cycle | Base Substitution | 32738 | 72.74 | 26.00 | 26.27 | -0.27 | After |
| REGRESSION.HCC1395_tumor.L007 | -138 | Cycle | Base Insertion | 32296 | 0.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -138 | Cycle | Base Deletion | 32296 | 1.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -139 | Cycle | Base Substitution | 32523 | 62.40 | 27.00 | 26.26 | 0.74 | After |
| REGRESSION.HCC1395_tumor.L007 | -139 | Cycle | Base Insertion | 32053 | 0.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -139 | Cycle | Base Deletion | 32053 | 1.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -14 | Cycle | Base Substitution | 38560 | 74.36 | 27.00 | 27.05 | -0.05 | After |
| REGRESSION.HCC1395_tumor.L007 | -14 | Cycle | Base Insertion | 38560 | 1.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -14 | Cycle | Base Deletion | 38560 | 3.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -140 | Cycle | Base Substitution | 32507 | 70.40 | 27.00 | 26.25 | 0.75 | After |
| REGRESSION.HCC1395_tumor.L007 | -140 | Cycle | Base Insertion | 32025 | 0.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -140 | Cycle | Base Deletion | 32025 | 0.99 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -141 | Cycle | Base Substitution | 32452 | 54.36 | 27.00 | 26.25 | 0.75 | After |
| REGRESSION.HCC1395_tumor.L007 | -141 | Cycle | Base Insertion | 31956 | 0.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -141 | Cycle | Base Deletion | 31956 | 1.82 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -142 | Cycle | Base Substitution | 32215 | 67.43 | 27.00 | 26.25 | 0.75 | After |
| REGRESSION.HCC1395_tumor.L007 | -142 | Cycle | Base Insertion | 31657 | 0.73 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -142 | Cycle | Base Deletion | 31657 | 2.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -143 | Cycle | Base Substitution | 32134 | 43.75 | 28.00 | 26.22 | 1.78 | After |
| REGRESSION.HCC1395_tumor.L007 | -143 | Cycle | Base Insertion | 31531 | 0.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -143 | Cycle | Base Deletion | 31531 | 0.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -144 | Cycle | Base Substitution | 32070 | 37.39 | 28.00 | 26.78 | 1.22 | After |
| REGRESSION.HCC1395_tumor.L007 | -144 | Cycle | Base Insertion | 31396 | 0.44 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -144 | Cycle | Base Deletion | 31396 | 0.57 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -145 | Cycle | Base Substitution | 31939 | 48.10 | 27.00 | 26.31 | 0.69 | After |
| REGRESSION.HCC1395_tumor.L007 | -145 | Cycle | Base Insertion | 24753 | 1.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -145 | Cycle | Base Deletion | 24753 | 0.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -146 | Cycle | Base Substitution | 31633 | 21.95 | 28.00 | 26.31 | 1.69 | After |
| REGRESSION.HCC1395_tumor.L007 | -146 | Cycle | Base Insertion | 24572 | 0.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -146 | Cycle | Base Deletion | 24572 | 1.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -147 | Cycle | Base Substitution | 31611 | 18.80 | 27.00 | 23.03 | 3.97 | After |
| REGRESSION.HCC1395_tumor.L007 | -148 | Cycle | Base Substitution | 31365 | 25.15 | 24.00 | 16.11 | 7.89 | After |
| REGRESSION.HCC1395_tumor.L007 | -149 | Cycle | Base Substitution | 19496 | 29.11 | 21.00 | 14.19 | 6.81 | After |
| REGRESSION.HCC1395_tumor.L007 | -15 | Cycle | Base Substitution | 38593 | 56.71 | 28.00 | 27.65 | 0.35 | After |
| REGRESSION.HCC1395_tumor.L007 | -15 | Cycle | Base Insertion | 38593 | 1.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -15 | Cycle | Base Deletion | 38593 | 2.82 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -150 | Cycle | Base Substitution | 6861 | 8.85 | 27.00 | 26.48 | 0.52 | After |
| REGRESSION.HCC1395_tumor.L007 | -16 | Cycle | Base Substitution | 38670 | 56.96 | 28.00 | 27.65 | 0.35 | After |
| REGRESSION.HCC1395_tumor.L007 | -16 | Cycle | Base Insertion | 38670 | 1.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -16 | Cycle | Base Deletion | 38670 | 3.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -17 | Cycle | Base Substitution | 38570 | 65.54 | 28.00 | 27.72 | 0.28 | After |
| REGRESSION.HCC1395_tumor.L007 | -17 | Cycle | Base Insertion | 38570 | 1.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -17 | Cycle | Base Deletion | 38570 | 3.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -18 | Cycle | Base Substitution | 38591 | 57.99 | 28.00 | 27.68 | 0.32 | After |
| REGRESSION.HCC1395_tumor.L007 | -18 | Cycle | Base Insertion | 38591 | 1.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -18 | Cycle | Base Deletion | 38591 | 3.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -19 | Cycle | Base Substitution | 38652 | 53.49 | 28.00 | 27.16 | 0.84 | After |
| REGRESSION.HCC1395_tumor.L007 | -19 | Cycle | Base Insertion | 38652 | 1.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -19 | Cycle | Base Deletion | 38652 | 2.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -2 | Cycle | Base Substitution | 38576 | 115.92 | 25.00 | 25.78 | -0.78 | After |
| REGRESSION.HCC1395_tumor.L007 | -20 | Cycle | Base Substitution | 38600 | 54.12 | 28.00 | 27.66 | 0.34 | After |
| REGRESSION.HCC1395_tumor.L007 | -20 | Cycle | Base Insertion | 38600 | 1.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -20 | Cycle | Base Deletion | 38600 | 3.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -21 | Cycle | Base Substitution | 38490 | 47.13 | 28.00 | 27.79 | 0.21 | After |
| REGRESSION.HCC1395_tumor.L007 | -21 | Cycle | Base Insertion | 38489 | 1.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -21 | Cycle | Base Deletion | 38489 | 3.44 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -22 | Cycle | Base Substitution | 38516 | 45.71 | 28.00 | 27.72 | 0.28 | After |
| REGRESSION.HCC1395_tumor.L007 | -22 | Cycle | Base Insertion | 38515 | 1.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -22 | Cycle | Base Deletion | 38515 | 3.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -23 | Cycle | Base Substitution | 38610 | 52.87 | 28.00 | 27.73 | 0.27 | After |
| REGRESSION.HCC1395_tumor.L007 | -23 | Cycle | Base Insertion | 38609 | 1.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -23 | Cycle | Base Deletion | 38609 | 3.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -24 | Cycle | Base Substitution | 38458 | 54.82 | 28.00 | 27.69 | 0.31 | After |
| REGRESSION.HCC1395_tumor.L007 | -24 | Cycle | Base Insertion | 38458 | 0.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -24 | Cycle | Base Deletion | 38458 | 3.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -25 | Cycle | Base Substitution | 38488 | 62.07 | 28.00 | 27.48 | 0.52 | After |
| REGRESSION.HCC1395_tumor.L007 | -25 | Cycle | Base Insertion | 38488 | 0.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -25 | Cycle | Base Deletion | 38488 | 2.88 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -26 | Cycle | Base Substitution | 38411 | 56.14 | 28.00 | 26.57 | 1.43 | After |
| REGRESSION.HCC1395_tumor.L007 | -26 | Cycle | Base Insertion | 38411 | 1.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -26 | Cycle | Base Deletion | 38411 | 2.48 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -27 | Cycle | Base Substitution | 38441 | 49.25 | 28.00 | 26.58 | 1.42 | After |
| REGRESSION.HCC1395_tumor.L007 | -27 | Cycle | Base Insertion | 38439 | 2.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -27 | Cycle | Base Deletion | 38439 | 3.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -28 | Cycle | Base Substitution | 38353 | 69.44 | 27.00 | 26.63 | 0.37 | After |
| REGRESSION.HCC1395_tumor.L007 | -28 | Cycle | Base Insertion | 38349 | 0.85 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -28 | Cycle | Base Deletion | 38349 | 3.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -29 | Cycle | Base Substitution | 38583 | 50.49 | 28.00 | 26.56 | 1.44 | After |
| REGRESSION.HCC1395_tumor.L007 | -29 | Cycle | Base Insertion | 38579 | 1.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -29 | Cycle | Base Deletion | 38579 | 3.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -3 | Cycle | Base Substitution | 38759 | 127.32 | 25.00 | 26.38 | -1.38 | After |
| REGRESSION.HCC1395_tumor.L007 | -30 | Cycle | Base Substitution | 38437 | 54.49 | 28.00 | 26.63 | 1.37 | After |
| REGRESSION.HCC1395_tumor.L007 | -30 | Cycle | Base Insertion | 38430 | 2.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -30 | Cycle | Base Deletion | 38430 | 3.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -31 | Cycle | Base Substitution | 38346 | 76.33 | 27.00 | 26.47 | 0.53 | After |
| REGRESSION.HCC1395_tumor.L007 | -31 | Cycle | Base Insertion | 38339 | 2.37 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -31 | Cycle | Base Deletion | 38339 | 3.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -32 | Cycle | Base Substitution | 38431 | 40.20 | 28.00 | 26.77 | 1.23 | After |
| REGRESSION.HCC1395_tumor.L007 | -32 | Cycle | Base Insertion | 38426 | 1.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -32 | Cycle | Base Deletion | 38426 | 4.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -33 | Cycle | Base Substitution | 38437 | 69.06 | 27.00 | 26.85 | 0.15 | After |
| REGRESSION.HCC1395_tumor.L007 | -33 | Cycle | Base Insertion | 38432 | 1.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -33 | Cycle | Base Deletion | 38432 | 4.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -34 | Cycle | Base Substitution | 38359 | 42.35 | 28.00 | 26.69 | 1.31 | After |
| REGRESSION.HCC1395_tumor.L007 | -34 | Cycle | Base Insertion | 38356 | 1.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -34 | Cycle | Base Deletion | 38356 | 4.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -35 | Cycle | Base Substitution | 38438 | 61.53 | 27.00 | 26.55 | 0.45 | After |
| REGRESSION.HCC1395_tumor.L007 | -35 | Cycle | Base Insertion | 38436 | 2.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -35 | Cycle | Base Deletion | 38436 | 4.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -36 | Cycle | Base Substitution | 38498 | 51.68 | 28.00 | 26.54 | 1.46 | After |
| REGRESSION.HCC1395_tumor.L007 | -36 | Cycle | Base Insertion | 38494 | 1.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -36 | Cycle | Base Deletion | 38494 | 4.96 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -37 | Cycle | Base Substitution | 38368 | 55.34 | 28.00 | 27.05 | 0.95 | After |
| REGRESSION.HCC1395_tumor.L007 | -37 | Cycle | Base Insertion | 38364 | 3.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -37 | Cycle | Base Deletion | 38364 | 5.26 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -38 | Cycle | Base Substitution | 38271 | 64.15 | 27.00 | 26.72 | 0.28 | After |
| REGRESSION.HCC1395_tumor.L007 | -38 | Cycle | Base Insertion | 38265 | 1.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -38 | Cycle | Base Deletion | 38265 | 5.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -39 | Cycle | Base Substitution | 38349 | 55.90 | 28.00 | 26.76 | 1.24 | After |
| REGRESSION.HCC1395_tumor.L007 | -39 | Cycle | Base Insertion | 38344 | 1.46 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -39 | Cycle | Base Deletion | 38344 | 4.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -4 | Cycle | Base Substitution | 38657 | 99.06 | 26.00 | 26.12 | -0.12 | After |
| REGRESSION.HCC1395_tumor.L007 | -40 | Cycle | Base Substitution | 38284 | 44.03 | 29.00 | 27.12 | 1.88 | After |
| REGRESSION.HCC1395_tumor.L007 | -40 | Cycle | Base Insertion | 38280 | 1.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -40 | Cycle | Base Deletion | 38280 | 4.56 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -41 | Cycle | Base Substitution | 38388 | 42.65 | 29.00 | 27.17 | 1.83 | After |
| REGRESSION.HCC1395_tumor.L007 | -41 | Cycle | Base Insertion | 38382 | 2.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -41 | Cycle | Base Deletion | 38382 | 5.95 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -42 | Cycle | Base Substitution | 38439 | 47.27 | 28.00 | 26.71 | 1.29 | After |
| REGRESSION.HCC1395_tumor.L007 | -42 | Cycle | Base Insertion | 38431 | 3.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -42 | Cycle | Base Deletion | 38431 | 3.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -43 | Cycle | Base Substitution | 38294 | 67.83 | 27.00 | 26.48 | 0.52 | After |
| REGRESSION.HCC1395_tumor.L007 | -43 | Cycle | Base Insertion | 38283 | 1.37 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -43 | Cycle | Base Deletion | 38283 | 4.56 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -44 | Cycle | Base Substitution | 38427 | 46.12 | 28.00 | 26.82 | 1.18 | After |
| REGRESSION.HCC1395_tumor.L007 | -44 | Cycle | Base Insertion | 38421 | 3.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -44 | Cycle | Base Deletion | 38421 | 4.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -45 | Cycle | Base Substitution | 38343 | 56.97 | 28.00 | 26.62 | 1.38 | After |
| REGRESSION.HCC1395_tumor.L007 | -45 | Cycle | Base Insertion | 38333 | 2.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -45 | Cycle | Base Deletion | 38333 | 4.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -46 | Cycle | Base Substitution | 38328 | 51.10 | 28.00 | 26.55 | 1.45 | After |
| REGRESSION.HCC1395_tumor.L007 | -46 | Cycle | Base Insertion | 38320 | 1.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -46 | Cycle | Base Deletion | 38320 | 3.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -47 | Cycle | Base Substitution | 38312 | 59.03 | 27.00 | 26.87 | 0.13 | After |
| REGRESSION.HCC1395_tumor.L007 | -47 | Cycle | Base Insertion | 38300 | 0.82 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -47 | Cycle | Base Deletion | 38300 | 4.29 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -48 | Cycle | Base Substitution | 38319 | 64.70 | 27.00 | 26.57 | 0.43 | After |
| REGRESSION.HCC1395_tumor.L007 | -48 | Cycle | Base Insertion | 38305 | 1.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -48 | Cycle | Base Deletion | 38305 | 4.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -49 | Cycle | Base Substitution | 38177 | 49.59 | 28.00 | 26.94 | 1.06 | After |
| REGRESSION.HCC1395_tumor.L007 | -49 | Cycle | Base Insertion | 38164 | 1.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -49 | Cycle | Base Deletion | 38164 | 3.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -5 | Cycle | Base Substitution | 38765 | 56.38 | 28.00 | 26.91 | 1.09 | After |
| REGRESSION.HCC1395_tumor.L007 | -5 | Cycle | Base Insertion | 38764 | 0.31 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -5 | Cycle | Base Deletion | 38764 | 1.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -50 | Cycle | Base Substitution | 38254 | 59.25 | 27.00 | 26.82 | 0.18 | After |
| REGRESSION.HCC1395_tumor.L007 | -50 | Cycle | Base Insertion | 38232 | 1.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -50 | Cycle | Base Deletion | 38232 | 3.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -51 | Cycle | Base Substitution | 38230 | 56.55 | 28.00 | 26.73 | 1.27 | After |
| REGRESSION.HCC1395_tumor.L007 | -51 | Cycle | Base Insertion | 38202 | 2.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -51 | Cycle | Base Deletion | 38202 | 4.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -52 | Cycle | Base Substitution | 38077 | 56.45 | 28.00 | 26.70 | 1.30 | After |
| REGRESSION.HCC1395_tumor.L007 | -52 | Cycle | Base Insertion | 38046 | 2.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -52 | Cycle | Base Deletion | 38046 | 4.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -53 | Cycle | Base Substitution | 38132 | 65.39 | 27.00 | 26.85 | 0.15 | After |
| REGRESSION.HCC1395_tumor.L007 | -53 | Cycle | Base Insertion | 38101 | 1.99 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -53 | Cycle | Base Deletion | 38101 | 3.99 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -54 | Cycle | Base Substitution | 38210 | 69.27 | 27.00 | 26.89 | 0.11 | After |
| REGRESSION.HCC1395_tumor.L007 | -54 | Cycle | Base Insertion | 38174 | 1.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -54 | Cycle | Base Deletion | 38174 | 4.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -55 | Cycle | Base Substitution | 38270 | 56.74 | 28.00 | 26.80 | 1.20 | After |
| REGRESSION.HCC1395_tumor.L007 | -55 | Cycle | Base Insertion | 38225 | 2.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -55 | Cycle | Base Deletion | 38225 | 4.38 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -56 | Cycle | Base Substitution | 38255 | 63.23 | 27.00 | 26.64 | 0.36 | After |
| REGRESSION.HCC1395_tumor.L007 | -56 | Cycle | Base Insertion | 38215 | 1.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -56 | Cycle | Base Deletion | 38215 | 4.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -57 | Cycle | Base Substitution | 38080 | 59.43 | 28.00 | 27.08 | 0.92 | After |
| REGRESSION.HCC1395_tumor.L007 | -57 | Cycle | Base Insertion | 38018 | 1.42 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -57 | Cycle | Base Deletion | 38018 | 4.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -58 | Cycle | Base Substitution | 38064 | 67.07 | 27.00 | 26.93 | 0.07 | After |
| REGRESSION.HCC1395_tumor.L007 | -58 | Cycle | Base Insertion | 38009 | 1.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -58 | Cycle | Base Deletion | 38009 | 5.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -59 | Cycle | Base Substitution | 38144 | 67.28 | 27.00 | 26.78 | 0.22 | After |
| REGRESSION.HCC1395_tumor.L007 | -59 | Cycle | Base Insertion | 38091 | 4.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -59 | Cycle | Base Deletion | 38091 | 4.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -6 | Cycle | Base Substitution | 38659 | 62.56 | 27.00 | 27.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -6 | Cycle | Base Insertion | 38658 | 0.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -6 | Cycle | Base Deletion | 38658 | 1.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -60 | Cycle | Base Substitution | 38062 | 79.85 | 27.00 | 26.73 | 0.27 | After |
| REGRESSION.HCC1395_tumor.L007 | -60 | Cycle | Base Insertion | 37993 | 3.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -60 | Cycle | Base Deletion | 37993 | 4.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -61 | Cycle | Base Substitution | 37957 | 52.52 | 28.00 | 26.95 | 1.05 | After |
| REGRESSION.HCC1395_tumor.L007 | -61 | Cycle | Base Insertion | 37902 | 2.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -61 | Cycle | Base Deletion | 37902 | 3.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -62 | Cycle | Base Substitution | 37983 | 58.78 | 27.00 | 26.98 | 0.02 | After |
| REGRESSION.HCC1395_tumor.L007 | -62 | Cycle | Base Insertion | 37923 | 2.96 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -62 | Cycle | Base Deletion | 37923 | 3.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -63 | Cycle | Base Substitution | 37902 | 49.85 | 28.00 | 26.82 | 1.18 | After |
| REGRESSION.HCC1395_tumor.L007 | -63 | Cycle | Base Insertion | 37842 | 3.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -63 | Cycle | Base Deletion | 37842 | 3.48 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -64 | Cycle | Base Substitution | 37880 | 60.80 | 27.00 | 26.88 | 0.12 | After |
| REGRESSION.HCC1395_tumor.L007 | -64 | Cycle | Base Insertion | 37814 | 1.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -64 | Cycle | Base Deletion | 37814 | 4.17 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -65 | Cycle | Base Substitution | 37855 | 65.85 | 27.00 | 26.92 | 0.08 | After |
| REGRESSION.HCC1395_tumor.L007 | -65 | Cycle | Base Insertion | 37765 | 2.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -65 | Cycle | Base Deletion | 37765 | 3.61 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -66 | Cycle | Base Substitution | 37980 | 60.87 | 27.00 | 26.95 | 0.05 | After |
| REGRESSION.HCC1395_tumor.L007 | -66 | Cycle | Base Insertion | 37887 | 1.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -66 | Cycle | Base Deletion | 37887 | 3.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -67 | Cycle | Base Substitution | 38002 | 69.22 | 27.00 | 26.67 | 0.33 | After |
| REGRESSION.HCC1395_tumor.L007 | -67 | Cycle | Base Insertion | 37903 | 1.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -67 | Cycle | Base Deletion | 37903 | 3.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -68 | Cycle | Base Substitution | 37930 | 61.75 | 27.00 | 26.92 | 0.08 | After |
| REGRESSION.HCC1395_tumor.L007 | -68 | Cycle | Base Insertion | 37824 | 1.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -68 | Cycle | Base Deletion | 37824 | 3.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -69 | Cycle | Base Substitution | 37871 | 70.07 | 27.00 | 27.14 | -0.14 | After |
| REGRESSION.HCC1395_tumor.L007 | -69 | Cycle | Base Insertion | 37768 | 1.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -69 | Cycle | Base Deletion | 37768 | 3.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -7 | Cycle | Base Substitution | 38563 | 71.63 | 27.00 | 26.89 | 0.11 | After |
| REGRESSION.HCC1395_tumor.L007 | -7 | Cycle | Base Insertion | 38563 | 0.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -7 | Cycle | Base Deletion | 38563 | 2.37 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -70 | Cycle | Base Substitution | 37761 | 52.91 | 28.00 | 26.66 | 1.34 | After |
| REGRESSION.HCC1395_tumor.L007 | -70 | Cycle | Base Insertion | 37648 | 1.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -70 | Cycle | Base Deletion | 37648 | 3.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -71 | Cycle | Base Substitution | 37707 | 66.61 | 27.00 | 26.75 | 0.25 | After |
| REGRESSION.HCC1395_tumor.L007 | -71 | Cycle | Base Insertion | 37605 | 2.02 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -71 | Cycle | Base Deletion | 37605 | 3.30 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -72 | Cycle | Base Substitution | 37668 | 78.35 | 27.00 | 26.78 | 0.22 | After |
| REGRESSION.HCC1395_tumor.L007 | -72 | Cycle | Base Insertion | 37542 | 1.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -72 | Cycle | Base Deletion | 37542 | 3.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -73 | Cycle | Base Substitution | 37794 | 79.85 | 27.00 | 26.64 | 0.36 | After |
| REGRESSION.HCC1395_tumor.L007 | -73 | Cycle | Base Insertion | 37651 | 1.48 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -73 | Cycle | Base Deletion | 37651 | 3.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -74 | Cycle | Base Substitution | 37577 | 67.19 | 27.00 | 26.54 | 0.46 | After |
| REGRESSION.HCC1395_tumor.L007 | -74 | Cycle | Base Insertion | 37428 | 1.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -74 | Cycle | Base Deletion | 37428 | 3.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -75 | Cycle | Base Substitution | 37689 | 73.06 | 27.00 | 26.74 | 0.26 | After |
| REGRESSION.HCC1395_tumor.L007 | -75 | Cycle | Base Insertion | 37539 | 1.30 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -75 | Cycle | Base Deletion | 37539 | 2.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -76 | Cycle | Base Substitution | 37595 | 74.94 | 27.00 | 26.67 | 0.33 | After |
| REGRESSION.HCC1395_tumor.L007 | -76 | Cycle | Base Insertion | 37451 | 1.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -76 | Cycle | Base Deletion | 37451 | 3.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -77 | Cycle | Base Substitution | 37559 | 71.47 | 27.00 | 26.71 | 0.29 | After |
| REGRESSION.HCC1395_tumor.L007 | -77 | Cycle | Base Insertion | 37418 | 0.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -77 | Cycle | Base Deletion | 37418 | 3.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -78 | Cycle | Base Substitution | 37431 | 71.23 | 27.00 | 26.79 | 0.21 | After |
| REGRESSION.HCC1395_tumor.L007 | -78 | Cycle | Base Insertion | 37274 | 1.42 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -78 | Cycle | Base Deletion | 37274 | 4.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -79 | Cycle | Base Substitution | 37454 | 81.78 | 27.00 | 26.62 | 0.38 | After |
| REGRESSION.HCC1395_tumor.L007 | -79 | Cycle | Base Insertion | 37284 | 1.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -79 | Cycle | Base Deletion | 37284 | 6.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -8 | Cycle | Base Substitution | 38722 | 49.89 | 28.00 | 27.03 | 0.97 | After |
| REGRESSION.HCC1395_tumor.L007 | -8 | Cycle | Base Insertion | 38722 | 0.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -8 | Cycle | Base Deletion | 38722 | 4.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -80 | Cycle | Base Substitution | 37399 | 63.93 | 27.00 | 26.55 | 0.45 | After |
| REGRESSION.HCC1395_tumor.L007 | -80 | Cycle | Base Insertion | 37215 | 1.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -80 | Cycle | Base Deletion | 37215 | 5.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -81 | Cycle | Base Substitution | 37347 | 67.43 | 27.00 | 26.74 | 0.26 | After |
| REGRESSION.HCC1395_tumor.L007 | -81 | Cycle | Base Insertion | 37157 | 1.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -81 | Cycle | Base Deletion | 37157 | 4.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -82 | Cycle | Base Substitution | 37291 | 59.52 | 27.00 | 26.66 | 0.34 | After |
| REGRESSION.HCC1395_tumor.L007 | -82 | Cycle | Base Insertion | 37069 | 1.47 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -82 | Cycle | Base Deletion | 37069 | 5.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -83 | Cycle | Base Substitution | 37314 | 68.60 | 27.00 | 26.49 | 0.51 | After |
| REGRESSION.HCC1395_tumor.L007 | -83 | Cycle | Base Insertion | 37104 | 0.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -83 | Cycle | Base Deletion | 37104 | 5.57 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -84 | Cycle | Base Substitution | 37166 | 87.43 | 26.00 | 26.67 | -0.67 | After |
| REGRESSION.HCC1395_tumor.L007 | -84 | Cycle | Base Insertion | 36952 | 1.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -84 | Cycle | Base Deletion | 36952 | 4.98 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -85 | Cycle | Base Substitution | 37253 | 78.34 | 27.00 | 26.58 | 0.42 | After |
| REGRESSION.HCC1395_tumor.L007 | -85 | Cycle | Base Insertion | 37039 | 1.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -85 | Cycle | Base Deletion | 37039 | 3.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -86 | Cycle | Base Substitution | 37234 | 64.02 | 27.00 | 26.74 | 0.26 | After |
| REGRESSION.HCC1395_tumor.L007 | -86 | Cycle | Base Insertion | 37032 | 1.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -86 | Cycle | Base Deletion | 37032 | 4.94 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -87 | Cycle | Base Substitution | 36979 | 80.95 | 27.00 | 26.41 | 0.59 | After |
| REGRESSION.HCC1395_tumor.L007 | -87 | Cycle | Base Insertion | 36766 | 1.36 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -87 | Cycle | Base Deletion | 36766 | 4.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -88 | Cycle | Base Substitution | 37062 | 74.39 | 27.00 | 26.79 | 0.21 | After |
| REGRESSION.HCC1395_tumor.L007 | -88 | Cycle | Base Insertion | 36828 | 1.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -88 | Cycle | Base Deletion | 36828 | 4.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -89 | Cycle | Base Substitution | 37111 | 82.12 | 27.00 | 26.10 | 0.90 | After |
| REGRESSION.HCC1395_tumor.L007 | -89 | Cycle | Base Insertion | 36860 | 1.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -89 | Cycle | Base Deletion | 36860 | 4.55 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -9 | Cycle | Base Substitution | 38581 | 61.23 | 28.00 | 27.49 | 0.51 | After |
| REGRESSION.HCC1395_tumor.L007 | -9 | Cycle | Base Insertion | 38581 | 1.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -9 | Cycle | Base Deletion | 38581 | 3.44 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -90 | Cycle | Base Substitution | 37007 | 81.53 | 27.00 | 26.55 | 0.45 | After |
| REGRESSION.HCC1395_tumor.L007 | -90 | Cycle | Base Insertion | 36737 | 0.96 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -90 | Cycle | Base Deletion | 36737 | 4.57 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -91 | Cycle | Base Substitution | 36813 | 71.36 | 27.00 | 26.53 | 0.47 | After |
| REGRESSION.HCC1395_tumor.L007 | -91 | Cycle | Base Insertion | 36519 | 1.21 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -91 | Cycle | Base Deletion | 36519 | 4.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -92 | Cycle | Base Substitution | 36748 | 70.11 | 27.00 | 26.41 | 0.59 | After |
| REGRESSION.HCC1395_tumor.L007 | -92 | Cycle | Base Insertion | 36464 | 1.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -92 | Cycle | Base Deletion | 36464 | 4.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -93 | Cycle | Base Substitution | 36688 | 69.48 | 27.00 | 26.66 | 0.34 | After |
| REGRESSION.HCC1395_tumor.L007 | -93 | Cycle | Base Insertion | 36398 | 1.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -93 | Cycle | Base Deletion | 36398 | 3.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -94 | Cycle | Base Substitution | 36683 | 65.04 | 27.00 | 26.51 | 0.49 | After |
| REGRESSION.HCC1395_tumor.L007 | -94 | Cycle | Base Insertion | 36421 | 1.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -94 | Cycle | Base Deletion | 36421 | 4.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -95 | Cycle | Base Substitution | 36559 | 69.15 | 27.00 | 26.37 | 0.63 | After |
| REGRESSION.HCC1395_tumor.L007 | -95 | Cycle | Base Insertion | 36299 | 1.73 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -95 | Cycle | Base Deletion | 36299 | 4.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -96 | Cycle | Base Substitution | 36623 | 82.29 | 26.00 | 26.52 | -0.52 | After |
| REGRESSION.HCC1395_tumor.L007 | -96 | Cycle | Base Insertion | 36357 | 1.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -96 | Cycle | Base Deletion | 36357 | 3.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -97 | Cycle | Base Substitution | 36445 | 82.19 | 26.00 | 26.45 | -0.45 | After |
| REGRESSION.HCC1395_tumor.L007 | -97 | Cycle | Base Insertion | 36188 | 2.47 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -97 | Cycle | Base Deletion | 36188 | 3.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -98 | Cycle | Base Substitution | 36254 | 61.94 | 27.00 | 26.74 | 0.26 | After |
| REGRESSION.HCC1395_tumor.L007 | -98 | Cycle | Base Insertion | 35977 | 2.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -98 | Cycle | Base Deletion | 35977 | 3.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -99 | Cycle | Base Substitution | 36283 | 75.72 | 27.00 | 26.46 | 0.54 | After |
| REGRESSION.HCC1395_tumor.L007 | -99 | Cycle | Base Insertion | 35988 | 1.37 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | -99 | Cycle | Base Deletion | 35988 | 4.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 1 | Cycle | Base Substitution | 38245 | 90.20 | 26.00 | 26.05 | -0.05 | After |
| REGRESSION.HCC1395_tumor.L007 | 10 | Cycle | Base Substitution | 38735 | 46.93 | 28.00 | 27.65 | 0.35 | After |
| REGRESSION.HCC1395_tumor.L007 | 10 | Cycle | Base Insertion | 38735 | 1.98 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 10 | Cycle | Base Deletion | 38735 | 2.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 100 | Cycle | Base Substitution | 36243 | 58.95 | 28.00 | 27.29 | 0.71 | After |
| REGRESSION.HCC1395_tumor.L007 | 100 | Cycle | Base Insertion | 35945 | 1.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 100 | Cycle | Base Deletion | 35945 | 2.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 101 | Cycle | Base Substitution | 36187 | 60.76 | 27.00 | 26.54 | 0.46 | After |
| REGRESSION.HCC1395_tumor.L007 | 101 | Cycle | Base Insertion | 35881 | 1.64 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 101 | Cycle | Base Deletion | 35881 | 3.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 102 | Cycle | Base Substitution | 36140 | 59.75 | 28.00 | 27.02 | 0.98 | After |
| REGRESSION.HCC1395_tumor.L007 | 102 | Cycle | Base Insertion | 35831 | 3.44 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 102 | Cycle | Base Deletion | 35831 | 2.99 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 103 | Cycle | Base Substitution | 36029 | 62.76 | 27.00 | 26.87 | 0.13 | After |
| REGRESSION.HCC1395_tumor.L007 | 103 | Cycle | Base Insertion | 35718 | 2.29 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 103 | Cycle | Base Deletion | 35718 | 2.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 104 | Cycle | Base Substitution | 36020 | 64.64 | 27.00 | 26.92 | 0.08 | After |
| REGRESSION.HCC1395_tumor.L007 | 104 | Cycle | Base Insertion | 35692 | 2.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 104 | Cycle | Base Deletion | 35692 | 2.64 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 105 | Cycle | Base Substitution | 35886 | 51.08 | 28.00 | 26.81 | 1.19 | After |
| REGRESSION.HCC1395_tumor.L007 | 105 | Cycle | Base Insertion | 35558 | 2.21 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 105 | Cycle | Base Deletion | 35558 | 3.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 106 | Cycle | Base Substitution | 35784 | 71.60 | 27.00 | 26.66 | 0.34 | After |
| REGRESSION.HCC1395_tumor.L007 | 106 | Cycle | Base Insertion | 35443 | 1.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 106 | Cycle | Base Deletion | 35443 | 3.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 107 | Cycle | Base Substitution | 35667 | 77.50 | 27.00 | 26.77 | 0.23 | After |
| REGRESSION.HCC1395_tumor.L007 | 107 | Cycle | Base Insertion | 35308 | 1.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 107 | Cycle | Base Deletion | 35308 | 3.61 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 108 | Cycle | Base Substitution | 35630 | 77.96 | 27.00 | 26.75 | 0.25 | After |
| REGRESSION.HCC1395_tumor.L007 | 108 | Cycle | Base Insertion | 35289 | 1.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 108 | Cycle | Base Deletion | 35289 | 3.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 109 | Cycle | Base Substitution | 35495 | 66.11 | 27.00 | 26.78 | 0.22 | After |
| REGRESSION.HCC1395_tumor.L007 | 109 | Cycle | Base Insertion | 35155 | 2.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 109 | Cycle | Base Deletion | 35155 | 3.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 11 | Cycle | Base Substitution | 38731 | 44.80 | 29.00 | 27.67 | 1.33 | After |
| REGRESSION.HCC1395_tumor.L007 | 11 | Cycle | Base Insertion | 38731 | 0.81 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 11 | Cycle | Base Deletion | 38731 | 3.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 110 | Cycle | Base Substitution | 35265 | 60.66 | 27.00 | 26.75 | 0.25 | After |
| REGRESSION.HCC1395_tumor.L007 | 110 | Cycle | Base Insertion | 34948 | 1.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 110 | Cycle | Base Deletion | 34948 | 4.31 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 111 | Cycle | Base Substitution | 35329 | 55.60 | 27.00 | 26.71 | 0.29 | After |
| REGRESSION.HCC1395_tumor.L007 | 111 | Cycle | Base Insertion | 35017 | 0.84 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 111 | Cycle | Base Deletion | 35017 | 4.56 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 112 | Cycle | Base Substitution | 35202 | 73.22 | 27.00 | 26.71 | 0.29 | After |
| REGRESSION.HCC1395_tumor.L007 | 112 | Cycle | Base Insertion | 34872 | 1.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 112 | Cycle | Base Deletion | 34872 | 4.86 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 113 | Cycle | Base Substitution | 35259 | 57.46 | 27.00 | 26.70 | 0.30 | After |
| REGRESSION.HCC1395_tumor.L007 | 113 | Cycle | Base Insertion | 34916 | 1.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 113 | Cycle | Base Deletion | 34916 | 3.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 114 | Cycle | Base Substitution | 35040 | 71.35 | 27.00 | 26.62 | 0.38 | After |
| REGRESSION.HCC1395_tumor.L007 | 114 | Cycle | Base Insertion | 34706 | 1.18 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 114 | Cycle | Base Deletion | 34706 | 3.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 115 | Cycle | Base Substitution | 35057 | 67.14 | 27.00 | 26.89 | 0.11 | After |
| REGRESSION.HCC1395_tumor.L007 | 115 | Cycle | Base Insertion | 34687 | 0.99 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 115 | Cycle | Base Deletion | 34687 | 3.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 116 | Cycle | Base Substitution | 34949 | 65.63 | 27.00 | 26.74 | 0.26 | After |
| REGRESSION.HCC1395_tumor.L007 | 116 | Cycle | Base Insertion | 34575 | 1.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 116 | Cycle | Base Deletion | 34575 | 3.17 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 117 | Cycle | Base Substitution | 34754 | 60.90 | 27.00 | 26.82 | 0.18 | After |
| REGRESSION.HCC1395_tumor.L007 | 117 | Cycle | Base Insertion | 34381 | 1.48 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 117 | Cycle | Base Deletion | 34381 | 3.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 118 | Cycle | Base Substitution | 34767 | 76.20 | 27.00 | 26.48 | 0.52 | After |
| REGRESSION.HCC1395_tumor.L007 | 118 | Cycle | Base Insertion | 34398 | 1.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 118 | Cycle | Base Deletion | 34398 | 2.56 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 119 | Cycle | Base Substitution | 34816 | 72.42 | 27.00 | 26.72 | 0.28 | After |
| REGRESSION.HCC1395_tumor.L007 | 119 | Cycle | Base Insertion | 34458 | 0.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 119 | Cycle | Base Deletion | 34458 | 2.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 12 | Cycle | Base Substitution | 38612 | 47.91 | 29.00 | 28.07 | 0.93 | After |
| REGRESSION.HCC1395_tumor.L007 | 12 | Cycle | Base Insertion | 38612 | 0.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 12 | Cycle | Base Deletion | 38612 | 3.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 120 | Cycle | Base Substitution | 34637 | 70.63 | 27.00 | 26.72 | 0.28 | After |
| REGRESSION.HCC1395_tumor.L007 | 120 | Cycle | Base Insertion | 34275 | 1.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 120 | Cycle | Base Deletion | 34275 | 3.02 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 121 | Cycle | Base Substitution | 34450 | 61.23 | 27.00 | 26.37 | 0.63 | After |
| REGRESSION.HCC1395_tumor.L007 | 121 | Cycle | Base Insertion | 34075 | 0.72 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 121 | Cycle | Base Deletion | 34075 | 3.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 122 | Cycle | Base Substitution | 34499 | 83.27 | 26.00 | 26.56 | -0.56 | After |
| REGRESSION.HCC1395_tumor.L007 | 122 | Cycle | Base Insertion | 34137 | 0.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 122 | Cycle | Base Deletion | 34137 | 3.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 123 | Cycle | Base Substitution | 34364 | 61.55 | 27.00 | 26.54 | 0.46 | After |
| REGRESSION.HCC1395_tumor.L007 | 123 | Cycle | Base Insertion | 33995 | 1.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 123 | Cycle | Base Deletion | 33995 | 3.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 124 | Cycle | Base Substitution | 34181 | 63.54 | 27.00 | 26.43 | 0.57 | After |
| REGRESSION.HCC1395_tumor.L007 | 124 | Cycle | Base Insertion | 33819 | 0.72 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 124 | Cycle | Base Deletion | 33819 | 3.88 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 125 | Cycle | Base Substitution | 34174 | 73.95 | 27.00 | 26.61 | 0.39 | After |
| REGRESSION.HCC1395_tumor.L007 | 125 | Cycle | Base Insertion | 33796 | 2.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 125 | Cycle | Base Deletion | 33796 | 3.07 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 126 | Cycle | Base Substitution | 34060 | 54.67 | 27.00 | 26.58 | 0.42 | After |
| REGRESSION.HCC1395_tumor.L007 | 126 | Cycle | Base Insertion | 33704 | 2.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 126 | Cycle | Base Deletion | 33704 | 2.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 127 | Cycle | Base Substitution | 33928 | 76.52 | 26.00 | 26.51 | -0.51 | After |
| REGRESSION.HCC1395_tumor.L007 | 127 | Cycle | Base Insertion | 33555 | 1.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 127 | Cycle | Base Deletion | 33555 | 3.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 128 | Cycle | Base Substitution | 33718 | 82.00 | 26.00 | 26.32 | -0.32 | After |
| REGRESSION.HCC1395_tumor.L007 | 128 | Cycle | Base Insertion | 33357 | 2.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 128 | Cycle | Base Deletion | 33357 | 3.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 129 | Cycle | Base Substitution | 33689 | 81.17 | 26.00 | 26.56 | -0.56 | After |
| REGRESSION.HCC1395_tumor.L007 | 129 | Cycle | Base Insertion | 33318 | 2.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 129 | Cycle | Base Deletion | 33318 | 2.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 13 | Cycle | Base Substitution | 38615 | 46.90 | 28.00 | 27.57 | 0.43 | After |
| REGRESSION.HCC1395_tumor.L007 | 13 | Cycle | Base Insertion | 38615 | 0.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 13 | Cycle | Base Deletion | 38615 | 3.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 130 | Cycle | Base Substitution | 33640 | 70.03 | 27.00 | 26.66 | 0.34 | After |
| REGRESSION.HCC1395_tumor.L007 | 130 | Cycle | Base Insertion | 33248 | 1.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 130 | Cycle | Base Deletion | 33248 | 2.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 131 | Cycle | Base Substitution | 33634 | 75.27 | 26.00 | 26.53 | -0.53 | After |
| REGRESSION.HCC1395_tumor.L007 | 131 | Cycle | Base Insertion | 33212 | 1.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 131 | Cycle | Base Deletion | 33212 | 3.61 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 132 | Cycle | Base Substitution | 33586 | 71.67 | 27.00 | 26.57 | 0.43 | After |
| REGRESSION.HCC1395_tumor.L007 | 132 | Cycle | Base Insertion | 33174 | 1.30 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 132 | Cycle | Base Deletion | 33174 | 3.46 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 133 | Cycle | Base Substitution | 33322 | 70.33 | 27.00 | 26.46 | 0.54 | After |
| REGRESSION.HCC1395_tumor.L007 | 133 | Cycle | Base Insertion | 32912 | 1.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 133 | Cycle | Base Deletion | 32912 | 3.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 134 | Cycle | Base Substitution | 33269 | 67.05 | 27.00 | 26.47 | 0.53 | After |
| REGRESSION.HCC1395_tumor.L007 | 134 | Cycle | Base Insertion | 32874 | 1.30 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 134 | Cycle | Base Deletion | 32874 | 2.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 135 | Cycle | Base Substitution | 33174 | 76.64 | 26.00 | 26.33 | -0.33 | After |
| REGRESSION.HCC1395_tumor.L007 | 135 | Cycle | Base Insertion | 32793 | 1.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 135 | Cycle | Base Deletion | 32793 | 2.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 136 | Cycle | Base Substitution | 33011 | 74.29 | 26.00 | 26.54 | -0.54 | After |
| REGRESSION.HCC1395_tumor.L007 | 136 | Cycle | Base Insertion | 32620 | 0.72 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 136 | Cycle | Base Deletion | 32620 | 2.61 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 137 | Cycle | Base Substitution | 33013 | 84.16 | 26.00 | 26.45 | -0.45 | After |
| REGRESSION.HCC1395_tumor.L007 | 137 | Cycle | Base Insertion | 32604 | 1.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 137 | Cycle | Base Deletion | 32604 | 3.29 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 138 | Cycle | Base Substitution | 32902 | 57.36 | 27.00 | 26.59 | 0.41 | After |
| REGRESSION.HCC1395_tumor.L007 | 138 | Cycle | Base Insertion | 32516 | 1.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 138 | Cycle | Base Deletion | 32516 | 2.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 139 | Cycle | Base Substitution | 32920 | 75.00 | 26.00 | 25.76 | 0.24 | After |
| REGRESSION.HCC1395_tumor.L007 | 139 | Cycle | Base Insertion | 32498 | 1.07 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 139 | Cycle | Base Deletion | 32498 | 2.96 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 14 | Cycle | Base Substitution | 38606 | 40.03 | 29.00 | 27.67 | 1.33 | After |
| REGRESSION.HCC1395_tumor.L007 | 14 | Cycle | Base Insertion | 38606 | 1.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 14 | Cycle | Base Deletion | 38606 | 3.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 140 | Cycle | Base Substitution | 32802 | 69.68 | 27.00 | 26.54 | 0.46 | After |
| REGRESSION.HCC1395_tumor.L007 | 140 | Cycle | Base Insertion | 32399 | 0.98 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 140 | Cycle | Base Deletion | 32399 | 2.44 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 141 | Cycle | Base Substitution | 32693 | 70.06 | 27.00 | 26.48 | 0.52 | After |
| REGRESSION.HCC1395_tumor.L007 | 141 | Cycle | Base Insertion | 32291 | 0.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 141 | Cycle | Base Deletion | 32291 | 2.31 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 142 | Cycle | Base Substitution | 32397 | 61.09 | 27.00 | 26.49 | 0.51 | After |
| REGRESSION.HCC1395_tumor.L007 | 142 | Cycle | Base Insertion | 31942 | 2.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 142 | Cycle | Base Deletion | 31942 | 1.64 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 143 | Cycle | Base Substitution | 32482 | 65.82 | 27.00 | 26.58 | 0.42 | After |
| REGRESSION.HCC1395_tumor.L007 | 143 | Cycle | Base Insertion | 32073 | 0.77 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 143 | Cycle | Base Deletion | 32073 | 0.81 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 144 | Cycle | Base Substitution | 32383 | 76.52 | 26.00 | 26.32 | -0.32 | After |
| REGRESSION.HCC1395_tumor.L007 | 144 | Cycle | Base Insertion | 31933 | 1.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 144 | Cycle | Base Deletion | 31933 | 1.02 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 145 | Cycle | Base Substitution | 32143 | 65.86 | 27.00 | 26.60 | 0.40 | After |
| REGRESSION.HCC1395_tumor.L007 | 145 | Cycle | Base Insertion | 31660 | 0.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 145 | Cycle | Base Deletion | 31660 | 0.85 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 146 | Cycle | Base Substitution | 32100 | 72.41 | 26.00 | 26.39 | -0.39 | After |
| REGRESSION.HCC1395_tumor.L007 | 146 | Cycle | Base Insertion | 31664 | 0.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 146 | Cycle | Base Deletion | 31664 | 0.57 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 147 | Cycle | Base Substitution | 31978 | 79.65 | 26.00 | 26.36 | -0.36 | After |
| REGRESSION.HCC1395_tumor.L007 | 148 | Cycle | Base Substitution | 31858 | 98.28 | 25.00 | 26.62 | -1.62 | After |
| REGRESSION.HCC1395_tumor.L007 | 149 | Cycle | Base Substitution | 31672 | 82.79 | 26.00 | 26.22 | -0.22 | After |
| REGRESSION.HCC1395_tumor.L007 | 15 | Cycle | Base Substitution | 38501 | 38.10 | 29.00 | 27.77 | 1.23 | After |
| REGRESSION.HCC1395_tumor.L007 | 15 | Cycle | Base Insertion | 38501 | 2.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 15 | Cycle | Base Deletion | 38501 | 2.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 150 | Cycle | Base Substitution | 31577 | 74.63 | 26.00 | 26.48 | -0.48 | After |
| REGRESSION.HCC1395_tumor.L007 | 16 | Cycle | Base Substitution | 38470 | 25.91 | 30.00 | 28.59 | 1.41 | After |
| REGRESSION.HCC1395_tumor.L007 | 16 | Cycle | Base Insertion | 38470 | 1.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 16 | Cycle | Base Deletion | 38470 | 2.47 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 17 | Cycle | Base Substitution | 38505 | 40.08 | 29.00 | 28.35 | 0.65 | After |
| REGRESSION.HCC1395_tumor.L007 | 17 | Cycle | Base Insertion | 38505 | 1.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 17 | Cycle | Base Deletion | 38505 | 2.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 18 | Cycle | Base Substitution | 38486 | 27.12 | 30.00 | 28.50 | 1.50 | After |
| REGRESSION.HCC1395_tumor.L007 | 18 | Cycle | Base Insertion | 38486 | 1.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 18 | Cycle | Base Deletion | 38486 | 2.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 19 | Cycle | Base Substitution | 38671 | 21.10 | 30.00 | 28.64 | 1.36 | After |
| REGRESSION.HCC1395_tumor.L007 | 19 | Cycle | Base Insertion | 38671 | 1.31 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 19 | Cycle | Base Deletion | 38671 | 2.85 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 2 | Cycle | Base Substitution | 38744 | 81.97 | 27.00 | 27.69 | -0.69 | After |
| REGRESSION.HCC1395_tumor.L007 | 20 | Cycle | Base Substitution | 38648 | 27.02 | 30.00 | 28.50 | 1.50 | After |
| REGRESSION.HCC1395_tumor.L007 | 20 | Cycle | Base Insertion | 38648 | 1.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 20 | Cycle | Base Deletion | 38648 | 3.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 21 | Cycle | Base Substitution | 38545 | 34.66 | 29.00 | 28.52 | 0.48 | After |
| REGRESSION.HCC1395_tumor.L007 | 21 | Cycle | Base Insertion | 38545 | 0.86 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 21 | Cycle | Base Deletion | 38545 | 3.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 22 | Cycle | Base Substitution | 38495 | 29.86 | 30.00 | 28.64 | 1.36 | After |
| REGRESSION.HCC1395_tumor.L007 | 22 | Cycle | Base Insertion | 38495 | 1.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 22 | Cycle | Base Deletion | 38495 | 3.48 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 23 | Cycle | Base Substitution | 38471 | 31.11 | 30.00 | 28.74 | 1.26 | After |
| REGRESSION.HCC1395_tumor.L007 | 23 | Cycle | Base Insertion | 38471 | 0.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 23 | Cycle | Base Deletion | 38471 | 4.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 24 | Cycle | Base Substitution | 38353 | 24.01 | 30.00 | 28.48 | 1.52 | After |
| REGRESSION.HCC1395_tumor.L007 | 24 | Cycle | Base Insertion | 38353 | 1.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 24 | Cycle | Base Deletion | 38353 | 3.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 25 | Cycle | Base Substitution | 38348 | 31.14 | 30.00 | 28.68 | 1.32 | After |
| REGRESSION.HCC1395_tumor.L007 | 25 | Cycle | Base Insertion | 38348 | 0.85 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 25 | Cycle | Base Deletion | 38348 | 3.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 26 | Cycle | Base Substitution | 38477 | 33.45 | 29.00 | 27.95 | 1.05 | After |
| REGRESSION.HCC1395_tumor.L007 | 26 | Cycle | Base Insertion | 38477 | 0.84 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 26 | Cycle | Base Deletion | 38477 | 4.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 27 | Cycle | Base Substitution | 38384 | 43.70 | 29.00 | 27.78 | 1.22 | After |
| REGRESSION.HCC1395_tumor.L007 | 27 | Cycle | Base Insertion | 38382 | 0.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 27 | Cycle | Base Deletion | 38382 | 4.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 28 | Cycle | Base Substitution | 38403 | 37.05 | 29.00 | 28.33 | 0.67 | After |
| REGRESSION.HCC1395_tumor.L007 | 28 | Cycle | Base Insertion | 38403 | 1.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 28 | Cycle | Base Deletion | 38403 | 3.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 29 | Cycle | Base Substitution | 38449 | 36.23 | 29.00 | 28.16 | 0.84 | After |
| REGRESSION.HCC1395_tumor.L007 | 29 | Cycle | Base Insertion | 38447 | 1.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 29 | Cycle | Base Deletion | 38447 | 3.56 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 3 | Cycle | Base Substitution | 38668 | 105.48 | 26.00 | 27.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 30 | Cycle | Base Substitution | 38422 | 35.42 | 29.00 | 27.83 | 1.17 | After |
| REGRESSION.HCC1395_tumor.L007 | 30 | Cycle | Base Insertion | 38420 | 1.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 30 | Cycle | Base Deletion | 38420 | 2.99 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 31 | Cycle | Base Substitution | 38448 | 38.63 | 29.00 | 28.02 | 0.98 | After |
| REGRESSION.HCC1395_tumor.L007 | 31 | Cycle | Base Insertion | 38446 | 2.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 31 | Cycle | Base Deletion | 38446 | 3.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 32 | Cycle | Base Substitution | 38405 | 58.28 | 28.00 | 27.92 | 0.08 | After |
| REGRESSION.HCC1395_tumor.L007 | 32 | Cycle | Base Insertion | 38402 | 2.29 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 32 | Cycle | Base Deletion | 38402 | 4.84 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 33 | Cycle | Base Substitution | 38466 | 48.56 | 28.00 | 27.76 | 0.24 | After |
| REGRESSION.HCC1395_tumor.L007 | 33 | Cycle | Base Insertion | 38463 | 2.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 33 | Cycle | Base Deletion | 38463 | 4.82 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 34 | Cycle | Base Substitution | 38477 | 45.67 | 28.00 | 27.79 | 0.21 | After |
| REGRESSION.HCC1395_tumor.L007 | 34 | Cycle | Base Insertion | 38473 | 1.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 34 | Cycle | Base Deletion | 38473 | 3.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 35 | Cycle | Base Substitution | 38321 | 51.24 | 28.00 | 27.84 | 0.16 | After |
| REGRESSION.HCC1395_tumor.L007 | 35 | Cycle | Base Insertion | 38319 | 1.18 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 35 | Cycle | Base Deletion | 38319 | 4.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 36 | Cycle | Base Substitution | 38384 | 49.12 | 28.00 | 27.90 | 0.10 | After |
| REGRESSION.HCC1395_tumor.L007 | 36 | Cycle | Base Insertion | 38381 | 0.96 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 36 | Cycle | Base Deletion | 38381 | 3.88 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 37 | Cycle | Base Substitution | 38465 | 40.40 | 29.00 | 28.30 | 0.70 | After |
| REGRESSION.HCC1395_tumor.L007 | 37 | Cycle | Base Insertion | 38462 | 1.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 37 | Cycle | Base Deletion | 38462 | 3.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 38 | Cycle | Base Substitution | 38368 | 39.67 | 29.00 | 27.82 | 1.18 | After |
| REGRESSION.HCC1395_tumor.L007 | 38 | Cycle | Base Insertion | 38364 | 1.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 38 | Cycle | Base Deletion | 38364 | 4.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 39 | Cycle | Base Substitution | 38263 | 39.90 | 29.00 | 28.18 | 0.82 | After |
| REGRESSION.HCC1395_tumor.L007 | 39 | Cycle | Base Insertion | 38259 | 1.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 39 | Cycle | Base Deletion | 38259 | 3.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 4 | Cycle | Base Substitution | 38726 | 73.68 | 27.00 | 27.01 | -0.01 | After |
| REGRESSION.HCC1395_tumor.L007 | 40 | Cycle | Base Substitution | 38294 | 48.91 | 28.00 | 27.65 | 0.35 | After |
| REGRESSION.HCC1395_tumor.L007 | 40 | Cycle | Base Insertion | 38289 | 2.18 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 40 | Cycle | Base Deletion | 38289 | 3.38 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 41 | Cycle | Base Substitution | 38325 | 48.48 | 28.00 | 27.66 | 0.34 | After |
| REGRESSION.HCC1395_tumor.L007 | 41 | Cycle | Base Insertion | 38321 | 1.47 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 41 | Cycle | Base Deletion | 38321 | 4.47 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 42 | Cycle | Base Substitution | 38255 | 49.60 | 28.00 | 27.84 | 0.16 | After |
| REGRESSION.HCC1395_tumor.L007 | 42 | Cycle | Base Insertion | 38249 | 1.36 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 42 | Cycle | Base Deletion | 38249 | 4.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 43 | Cycle | Base Substitution | 38272 | 46.24 | 28.00 | 27.84 | 0.16 | After |
| REGRESSION.HCC1395_tumor.L007 | 43 | Cycle | Base Insertion | 38265 | 1.77 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 43 | Cycle | Base Deletion | 38265 | 3.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 44 | Cycle | Base Substitution | 38200 | 45.95 | 28.00 | 27.51 | 0.49 | After |
| REGRESSION.HCC1395_tumor.L007 | 44 | Cycle | Base Insertion | 38195 | 1.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 44 | Cycle | Base Deletion | 38195 | 2.95 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 45 | Cycle | Base Substitution | 38212 | 50.01 | 28.00 | 27.63 | 0.37 | After |
| REGRESSION.HCC1395_tumor.L007 | 45 | Cycle | Base Insertion | 38204 | 0.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 45 | Cycle | Base Deletion | 38204 | 3.99 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 46 | Cycle | Base Substitution | 38347 | 44.15 | 29.00 | 27.83 | 1.17 | After |
| REGRESSION.HCC1395_tumor.L007 | 46 | Cycle | Base Insertion | 38338 | 0.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 46 | Cycle | Base Deletion | 38338 | 3.81 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 47 | Cycle | Base Substitution | 38189 | 53.67 | 28.00 | 27.56 | 0.44 | After |
| REGRESSION.HCC1395_tumor.L007 | 47 | Cycle | Base Insertion | 38178 | 0.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 47 | Cycle | Base Deletion | 38178 | 3.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 48 | Cycle | Base Substitution | 38179 | 46.49 | 28.00 | 27.62 | 0.38 | After |
| REGRESSION.HCC1395_tumor.L007 | 48 | Cycle | Base Insertion | 38168 | 2.86 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 48 | Cycle | Base Deletion | 38168 | 3.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 49 | Cycle | Base Substitution | 38204 | 49.98 | 29.00 | 28.30 | 0.70 | After |
| REGRESSION.HCC1395_tumor.L007 | 49 | Cycle | Base Insertion | 38192 | 1.21 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 49 | Cycle | Base Deletion | 38192 | 4.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 5 | Cycle | Base Substitution | 38646 | 51.57 | 28.00 | 27.81 | 0.19 | After |
| REGRESSION.HCC1395_tumor.L007 | 5 | Cycle | Base Insertion | 38646 | 1.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 5 | Cycle | Base Deletion | 38646 | 0.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 50 | Cycle | Base Substitution | 38231 | 43.54 | 29.00 | 27.78 | 1.22 | After |
| REGRESSION.HCC1395_tumor.L007 | 50 | Cycle | Base Insertion | 38214 | 1.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 50 | Cycle | Base Deletion | 38214 | 3.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 51 | Cycle | Base Substitution | 38189 | 51.53 | 28.00 | 27.96 | 0.04 | After |
| REGRESSION.HCC1395_tumor.L007 | 51 | Cycle | Base Insertion | 38167 | 1.57 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 51 | Cycle | Base Deletion | 38167 | 3.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 52 | Cycle | Base Substitution | 38182 | 43.10 | 29.00 | 27.50 | 1.50 | After |
| REGRESSION.HCC1395_tumor.L007 | 52 | Cycle | Base Insertion | 38151 | 1.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 52 | Cycle | Base Deletion | 38151 | 3.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 53 | Cycle | Base Substitution | 38106 | 37.37 | 29.00 | 27.70 | 1.30 | After |
| REGRESSION.HCC1395_tumor.L007 | 53 | Cycle | Base Insertion | 38074 | 1.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 53 | Cycle | Base Deletion | 38074 | 3.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 54 | Cycle | Base Substitution | 38118 | 46.48 | 28.00 | 27.68 | 0.32 | After |
| REGRESSION.HCC1395_tumor.L007 | 54 | Cycle | Base Insertion | 38080 | 4.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 54 | Cycle | Base Deletion | 38080 | 3.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 55 | Cycle | Base Substitution | 38214 | 44.01 | 29.00 | 27.60 | 1.40 | After |
| REGRESSION.HCC1395_tumor.L007 | 55 | Cycle | Base Insertion | 38174 | 2.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 55 | Cycle | Base Deletion | 38174 | 4.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 56 | Cycle | Base Substitution | 38160 | 41.65 | 29.00 | 27.77 | 1.23 | After |
| REGRESSION.HCC1395_tumor.L007 | 56 | Cycle | Base Insertion | 38127 | 1.77 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 56 | Cycle | Base Deletion | 38127 | 3.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 57 | Cycle | Base Substitution | 38172 | 58.68 | 28.00 | 27.76 | 0.24 | After |
| REGRESSION.HCC1395_tumor.L007 | 57 | Cycle | Base Insertion | 38121 | 1.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 57 | Cycle | Base Deletion | 38121 | 4.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 58 | Cycle | Base Substitution | 38113 | 36.45 | 29.00 | 27.96 | 1.04 | After |
| REGRESSION.HCC1395_tumor.L007 | 58 | Cycle | Base Insertion | 38062 | 2.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 58 | Cycle | Base Deletion | 38062 | 4.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 59 | Cycle | Base Substitution | 38134 | 41.02 | 29.00 | 27.86 | 1.14 | After |
| REGRESSION.HCC1395_tumor.L007 | 59 | Cycle | Base Insertion | 38084 | 1.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 59 | Cycle | Base Deletion | 38084 | 3.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 6 | Cycle | Base Substitution | 38644 | 43.12 | 29.00 | 27.62 | 1.38 | After |
| REGRESSION.HCC1395_tumor.L007 | 6 | Cycle | Base Insertion | 38644 | 0.29 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 6 | Cycle | Base Deletion | 38644 | 0.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 60 | Cycle | Base Substitution | 38065 | 55.21 | 28.00 | 27.66 | 0.34 | After |
| REGRESSION.HCC1395_tumor.L007 | 60 | Cycle | Base Insertion | 38004 | 1.38 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 60 | Cycle | Base Deletion | 38004 | 3.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 61 | Cycle | Base Substitution | 38057 | 50.25 | 28.00 | 27.66 | 0.34 | After |
| REGRESSION.HCC1395_tumor.L007 | 61 | Cycle | Base Insertion | 38001 | 1.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 61 | Cycle | Base Deletion | 38001 | 4.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 62 | Cycle | Base Substitution | 38070 | 40.79 | 29.00 | 28.17 | 0.83 | After |
| REGRESSION.HCC1395_tumor.L007 | 62 | Cycle | Base Insertion | 38001 | 3.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 62 | Cycle | Base Deletion | 38001 | 3.88 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 63 | Cycle | Base Substitution | 38012 | 55.60 | 28.00 | 27.53 | 0.47 | After |
| REGRESSION.HCC1395_tumor.L007 | 63 | Cycle | Base Insertion | 37942 | 1.99 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 63 | Cycle | Base Deletion | 37942 | 3.94 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 64 | Cycle | Base Substitution | 38049 | 47.67 | 28.00 | 27.47 | 0.53 | After |
| REGRESSION.HCC1395_tumor.L007 | 64 | Cycle | Base Insertion | 37976 | 1.86 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 64 | Cycle | Base Deletion | 37976 | 4.07 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 65 | Cycle | Base Substitution | 38145 | 53.54 | 28.00 | 27.46 | 0.54 | After |
| REGRESSION.HCC1395_tumor.L007 | 65 | Cycle | Base Insertion | 38058 | 1.72 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 65 | Cycle | Base Deletion | 38058 | 4.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 66 | Cycle | Base Substitution | 37872 | 63.42 | 28.00 | 27.39 | 0.61 | After |
| REGRESSION.HCC1395_tumor.L007 | 66 | Cycle | Base Insertion | 37781 | 2.18 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 66 | Cycle | Base Deletion | 37781 | 3.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 67 | Cycle | Base Substitution | 37917 | 52.51 | 28.00 | 27.14 | 0.86 | After |
| REGRESSION.HCC1395_tumor.L007 | 67 | Cycle | Base Insertion | 37816 | 1.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 67 | Cycle | Base Deletion | 37816 | 3.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 68 | Cycle | Base Substitution | 37998 | 54.79 | 28.00 | 27.38 | 0.62 | After |
| REGRESSION.HCC1395_tumor.L007 | 68 | Cycle | Base Insertion | 37882 | 1.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 68 | Cycle | Base Deletion | 37882 | 4.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 69 | Cycle | Base Substitution | 37780 | 46.91 | 28.00 | 27.45 | 0.55 | After |
| REGRESSION.HCC1395_tumor.L007 | 69 | Cycle | Base Insertion | 37673 | 1.64 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 69 | Cycle | Base Deletion | 37673 | 3.48 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 7 | Cycle | Base Substitution | 38497 | 56.78 | 28.00 | 27.39 | 0.61 | After |
| REGRESSION.HCC1395_tumor.L007 | 7 | Cycle | Base Insertion | 38497 | 0.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 7 | Cycle | Base Deletion | 38497 | 0.98 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 70 | Cycle | Base Substitution | 37879 | 56.31 | 28.00 | 27.51 | 0.49 | After |
| REGRESSION.HCC1395_tumor.L007 | 70 | Cycle | Base Insertion | 37768 | 0.95 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 70 | Cycle | Base Deletion | 37768 | 3.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 71 | Cycle | Base Substitution | 37766 | 59.88 | 28.00 | 27.47 | 0.53 | After |
| REGRESSION.HCC1395_tumor.L007 | 71 | Cycle | Base Insertion | 37647 | 1.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 71 | Cycle | Base Deletion | 37647 | 4.64 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 72 | Cycle | Base Substitution | 37763 | 44.75 | 28.00 | 27.57 | 0.43 | After |
| REGRESSION.HCC1395_tumor.L007 | 72 | Cycle | Base Insertion | 37634 | 0.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 72 | Cycle | Base Deletion | 37634 | 4.81 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 73 | Cycle | Base Substitution | 37698 | 54.09 | 28.00 | 27.25 | 0.75 | After |
| REGRESSION.HCC1395_tumor.L007 | 73 | Cycle | Base Insertion | 37563 | 1.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 73 | Cycle | Base Deletion | 37563 | 5.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 74 | Cycle | Base Substitution | 37665 | 52.84 | 28.00 | 27.80 | 0.20 | After |
| REGRESSION.HCC1395_tumor.L007 | 74 | Cycle | Base Insertion | 37520 | 1.57 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 74 | Cycle | Base Deletion | 37520 | 5.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 75 | Cycle | Base Substitution | 37694 | 61.39 | 28.00 | 27.27 | 0.73 | After |
| REGRESSION.HCC1395_tumor.L007 | 75 | Cycle | Base Insertion | 37533 | 1.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 75 | Cycle | Base Deletion | 37533 | 4.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 76 | Cycle | Base Substitution | 37640 | 53.98 | 28.00 | 27.46 | 0.54 | After |
| REGRESSION.HCC1395_tumor.L007 | 76 | Cycle | Base Insertion | 37500 | 2.17 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 76 | Cycle | Base Deletion | 37500 | 5.77 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 77 | Cycle | Base Substitution | 37575 | 54.01 | 28.00 | 27.24 | 0.76 | After |
| REGRESSION.HCC1395_tumor.L007 | 77 | Cycle | Base Insertion | 37426 | 1.10 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 77 | Cycle | Base Deletion | 37426 | 4.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 78 | Cycle | Base Substitution | 37487 | 43.99 | 29.00 | 28.16 | 0.84 | After |
| REGRESSION.HCC1395_tumor.L007 | 78 | Cycle | Base Insertion | 37335 | 4.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 78 | Cycle | Base Deletion | 37335 | 4.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 79 | Cycle | Base Substitution | 37373 | 56.96 | 28.00 | 27.17 | 0.83 | After |
| REGRESSION.HCC1395_tumor.L007 | 79 | Cycle | Base Insertion | 37209 | 1.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 79 | Cycle | Base Deletion | 37209 | 4.96 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 8 | Cycle | Base Substitution | 38684 | 58.44 | 28.00 | 27.35 | 0.65 | After |
| REGRESSION.HCC1395_tumor.L007 | 8 | Cycle | Base Insertion | 38684 | 0.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 8 | Cycle | Base Deletion | 38684 | 1.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 80 | Cycle | Base Substitution | 37376 | 69.68 | 27.00 | 26.90 | 0.10 | After |
| REGRESSION.HCC1395_tumor.L007 | 80 | Cycle | Base Insertion | 37189 | 1.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 80 | Cycle | Base Deletion | 37189 | 4.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 81 | Cycle | Base Substitution | 37327 | 52.28 | 28.00 | 27.29 | 0.71 | After |
| REGRESSION.HCC1395_tumor.L007 | 81 | Cycle | Base Insertion | 37144 | 0.85 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 81 | Cycle | Base Deletion | 37144 | 5.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 82 | Cycle | Base Substitution | 37281 | 54.17 | 28.00 | 27.27 | 0.73 | After |
| REGRESSION.HCC1395_tumor.L007 | 82 | Cycle | Base Insertion | 37072 | 0.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 82 | Cycle | Base Deletion | 37072 | 4.31 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 83 | Cycle | Base Substitution | 37193 | 60.23 | 28.00 | 27.15 | 0.85 | After |
| REGRESSION.HCC1395_tumor.L007 | 83 | Cycle | Base Insertion | 36987 | 1.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 83 | Cycle | Base Deletion | 36987 | 4.51 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 84 | Cycle | Base Substitution | 37194 | 66.83 | 27.00 | 27.30 | -0.30 | After |
| REGRESSION.HCC1395_tumor.L007 | 84 | Cycle | Base Insertion | 36991 | 1.44 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 84 | Cycle | Base Deletion | 36991 | 4.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 85 | Cycle | Base Substitution | 37157 | 62.53 | 28.00 | 27.14 | 0.86 | After |
| REGRESSION.HCC1395_tumor.L007 | 85 | Cycle | Base Insertion | 36944 | 1.99 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 85 | Cycle | Base Deletion | 36944 | 4.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 86 | Cycle | Base Substitution | 37188 | 60.89 | 27.00 | 26.96 | 0.04 | After |
| REGRESSION.HCC1395_tumor.L007 | 86 | Cycle | Base Insertion | 36979 | 2.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 86 | Cycle | Base Deletion | 36979 | 3.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 87 | Cycle | Base Substitution | 37078 | 64.42 | 27.00 | 26.99 | 0.01 | After |
| REGRESSION.HCC1395_tumor.L007 | 87 | Cycle | Base Insertion | 36863 | 1.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 87 | Cycle | Base Deletion | 36863 | 3.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 88 | Cycle | Base Substitution | 37153 | 47.47 | 28.00 | 27.15 | 0.85 | After |
| REGRESSION.HCC1395_tumor.L007 | 88 | Cycle | Base Insertion | 36926 | 2.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 88 | Cycle | Base Deletion | 36926 | 3.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 89 | Cycle | Base Substitution | 36877 | 68.89 | 27.00 | 26.80 | 0.20 | After |
| REGRESSION.HCC1395_tumor.L007 | 89 | Cycle | Base Insertion | 36629 | 2.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 89 | Cycle | Base Deletion | 36629 | 3.64 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 9 | Cycle | Base Substitution | 38651 | 45.18 | 29.00 | 27.57 | 1.43 | After |
| REGRESSION.HCC1395_tumor.L007 | 9 | Cycle | Base Insertion | 38651 | 0.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 9 | Cycle | Base Deletion | 38651 | 2.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 90 | Cycle | Base Substitution | 36913 | 58.57 | 28.00 | 27.02 | 0.98 | After |
| REGRESSION.HCC1395_tumor.L007 | 90 | Cycle | Base Insertion | 36628 | 1.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 90 | Cycle | Base Deletion | 36628 | 4.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 91 | Cycle | Base Substitution | 36791 | 58.63 | 28.00 | 27.18 | 0.82 | After |
| REGRESSION.HCC1395_tumor.L007 | 91 | Cycle | Base Insertion | 36496 | 1.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 91 | Cycle | Base Deletion | 36496 | 3.47 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 92 | Cycle | Base Substitution | 36859 | 57.54 | 27.00 | 26.79 | 0.21 | After |
| REGRESSION.HCC1395_tumor.L007 | 92 | Cycle | Base Insertion | 36572 | 0.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 92 | Cycle | Base Deletion | 36572 | 2.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 93 | Cycle | Base Substitution | 36761 | 59.91 | 27.00 | 26.88 | 0.12 | After |
| REGRESSION.HCC1395_tumor.L007 | 93 | Cycle | Base Insertion | 36485 | 1.81 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 93 | Cycle | Base Deletion | 36485 | 2.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 94 | Cycle | Base Substitution | 36660 | 56.59 | 27.00 | 26.93 | 0.07 | After |
| REGRESSION.HCC1395_tumor.L007 | 94 | Cycle | Base Insertion | 36400 | 0.96 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 94 | Cycle | Base Deletion | 36400 | 3.36 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 95 | Cycle | Base Substitution | 36571 | 59.89 | 27.00 | 27.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 95 | Cycle | Base Insertion | 36310 | 1.36 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 95 | Cycle | Base Deletion | 36310 | 3.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 96 | Cycle | Base Substitution | 36515 | 60.36 | 28.00 | 27.39 | 0.61 | After |
| REGRESSION.HCC1395_tumor.L007 | 96 | Cycle | Base Insertion | 36243 | 1.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 96 | Cycle | Base Deletion | 36243 | 3.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 97 | Cycle | Base Substitution | 36465 | 64.51 | 27.00 | 27.06 | -0.06 | After |
| REGRESSION.HCC1395_tumor.L007 | 97 | Cycle | Base Insertion | 36194 | 2.36 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 97 | Cycle | Base Deletion | 36194 | 3.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 98 | Cycle | Base Substitution | 36403 | 78.42 | 27.00 | 26.80 | 0.20 | After |
| REGRESSION.HCC1395_tumor.L007 | 98 | Cycle | Base Insertion | 36125 | 1.30 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 98 | Cycle | Base Deletion | 36125 | 3.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 99 | Cycle | Base Substitution | 36249 | 52.43 | 28.00 | 27.17 | 0.83 | After |
| REGRESSION.HCC1395_tumor.L007 | 99 | Cycle | Base Insertion | 35963 | 0.95 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 99 | Cycle | Base Deletion | 35963 | 2.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 10 | QualityScore | Base Substitution | 14632 | 1473.69 | 10.00 | 10.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 11 | QualityScore | Base Substitution | 14447 | 1089.69 | 11.00 | 11.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 12 | QualityScore | Base Substitution | 21601 | 1223.31 | 12.00 | 12.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 13 | QualityScore | Base Substitution | 5961 | 41.67 | 17.00 | 13.00 | 4.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 14 | QualityScore | Base Substitution | 17628 | 363.85 | 16.00 | 14.00 | 2.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 15 | QualityScore | Base Substitution | 17100 | 13.17 | 21.00 | 15.00 | 6.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 16 | QualityScore | Base Substitution | 8309 | 2.84 | 20.00 | 16.00 | 4.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 17 | QualityScore | Base Substitution | 14178 | 2.57 | 22.00 | 17.00 | 5.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 22 | QualityScore | Base Substitution | 297 | 0.12 | 22.00 | 22.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 23 | QualityScore | Base Substitution | 99680 | 628.72 | 22.00 | 23.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 24 | QualityScore | Base Substitution | 101552 | 391.84 | 24.00 | 24.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 25 | QualityScore | Base Substitution | 140050 | 208.27 | 27.00 | 25.00 | 2.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 28 | QualityScore | Base Substitution | 7659 | 3.73 | 28.00 | 28.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 29 | QualityScore | Base Substitution | 57779 | 99.22 | 28.00 | 29.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 30 | QualityScore | Base Substitution | 2492682 | 1578.99 | 32.00 | 30.00 | 2.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 31 | QualityScore | Base Substitution | 2844746 | 1244.04 | 33.00 | 31.00 | 2.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 32 | QualityScore | Base Substitution | 4652811 | 1073.69 | 36.00 | 32.00 | 4.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 33 | QualityScore | Base Substitution | 375156 | 75.45 | 35.00 | 33.00 | 2.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 45 | QualityScore | Base Insertion | 10952123 | 435.78 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 45 | QualityScore | Base Deletion | 10952123 | 992.30 | 41.00 | 45.00 | -4.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 8 | QualityScore | Base Substitution | 1459 | 258.41 | 8.00 | 8.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L007 | 9 | QualityScore | Base Substitution | 64396 | 8729.24 | 9.00 | 9.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | AA | Context | Base Substitution | 831398 | 1822.00 | 27.00 | 25.48 | 1.52 | After |
| REGRESSION.HCC1395_tumor.L008 | AAA | Context | Base Insertion | 295364 | 58.93 | 43.00 | 45.00 | -2.00 | After |
| REGRESSION.HCC1395_tumor.L008 | AAA | Context | Base Deletion | 295364 | 195.95 | 37.00 | 45.00 | -8.00 | After |
| REGRESSION.HCC1395_tumor.L008 | AAC | Context | Base Insertion | 131279 | 6.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | AAC | Context | Base Deletion | 131279 | 10.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | AAG | Context | Base Insertion | 196934 | 6.46 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | AAG | Context | Base Deletion | 196934 | 9.26 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | AAT | Context | Base Insertion | 174256 | 1.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | AAT | Context | Base Deletion | 174256 | 14.34 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L008 | AC | Context | Base Substitution | 528754 | 1907.49 | 24.00 | 24.70 | -0.70 | After |
| REGRESSION.HCC1395_tumor.L008 | ACA | Context | Base Insertion | 203645 | 19.15 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L008 | ACA | Context | Base Deletion | 203645 | 34.51 | 43.00 | 45.00 | -2.00 | After |
| REGRESSION.HCC1395_tumor.L008 | ACC | Context | Base Insertion | 146082 | 6.77 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | ACC | Context | Base Deletion | 146082 | 6.44 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | ACG | Context | Base Insertion | 30673 | 0.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | ACG | Context | Base Deletion | 30673 | 2.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | ACT | Context | Base Insertion | 156989 | 2.56 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | ACT | Context | Base Deletion | 156989 | 13.74 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L008 | AG | Context | Base Substitution | 794831 | 619.31 | 31.00 | 28.68 | 2.32 | After |
| REGRESSION.HCC1395_tumor.L008 | AGA | Context | Base Insertion | 220466 | 5.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | AGA | Context | Base Deletion | 220466 | 13.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | AGC | Context | Base Insertion | 191152 | 0.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | AGC | Context | Base Deletion | 191152 | 6.72 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | AGG | Context | Base Insertion | 225693 | 14.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | AGG | Context | Base Deletion | 225693 | 7.82 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | AGT | Context | Base Insertion | 154005 | 1.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | AGT | Context | Base Deletion | 154005 | 6.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | AT | Context | Base Substitution | 601661 | 639.33 | 30.00 | 27.61 | 2.39 | After |
| REGRESSION.HCC1395_tumor.L008 | ATA | Context | Base Insertion | 135161 | 10.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | ATA | Context | Base Deletion | 135161 | 7.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | ATC | Context | Base Insertion | 120639 | 0.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | ATC | Context | Base Deletion | 120639 | 6.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | ATG | Context | Base Insertion | 174057 | 4.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | ATG | Context | Base Deletion | 174057 | 2.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | ATT | Context | Base Insertion | 182598 | 4.21 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | ATT | Context | Base Deletion | 182598 | 7.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | CA | Context | Base Substitution | 852318 | 1806.54 | 27.00 | 26.39 | 0.61 | After |
| REGRESSION.HCC1395_tumor.L008 | CAA | Context | Base Insertion | 171301 | 5.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | CAA | Context | Base Deletion | 171301 | 14.65 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L008 | CAC | Context | Base Insertion | 183202 | 22.00 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L008 | CAC | Context | Base Deletion | 183202 | 33.31 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L008 | CAG | Context | Base Insertion | 289765 | 7.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | CAG | Context | Base Deletion | 289765 | 12.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | CAT | Context | Base Insertion | 169787 | 6.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | CAT | Context | Base Deletion | 169787 | 6.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | CC | Context | Base Substitution | 762944 | 2431.74 | 25.00 | 24.58 | 0.42 | After |
| REGRESSION.HCC1395_tumor.L008 | CCA | Context | Base Insertion | 244622 | 6.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | CCA | Context | Base Deletion | 244622 | 7.84 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | CCC | Context | Base Insertion | 211880 | 12.30 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | CCC | Context | Base Deletion | 211880 | 16.43 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L008 | CCG | Context | Base Insertion | 53524 | 3.94 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | CCG | Context | Base Deletion | 53524 | 5.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | CCT | Context | Base Insertion | 242426 | 2.31 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | CCT | Context | Base Deletion | 242426 | 9.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | CG | Context | Base Substitution | 160744 | 526.69 | 25.00 | 24.84 | 0.16 | After |
| REGRESSION.HCC1395_tumor.L008 | CGA | Context | Base Insertion | 55797 | 4.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | CGA | Context | Base Deletion | 55797 | 0.07 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | CGC | Context | Base Insertion | 80153 | 1.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | CGC | Context | Base Deletion | 80153 | 5.95 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | CGG | Context | Base Insertion | 96991 | 2.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | CGG | Context | Base Deletion | 96991 | 6.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | CGT | Context | Base Insertion | 62762 | 0.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | CGT | Context | Base Deletion | 62762 | 1.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | CT | Context | Base Substitution | 836482 | 413.10 | 33.00 | 29.34 | 3.66 | After |
| REGRESSION.HCC1395_tumor.L008 | CTA | Context | Base Insertion | 96160 | 0.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | CTA | Context | Base Deletion | 96160 | 6.31 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | CTC | Context | Base Insertion | 201346 | 6.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | CTC | Context | Base Deletion | 201346 | 17.30 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L008 | CTG | Context | Base Insertion | 291107 | 3.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | CTG | Context | Base Deletion | 291107 | 13.79 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | CTT | Context | Base Insertion | 209522 | 8.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | CTT | Context | Base Deletion | 209522 | 9.51 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | GA | Context | Base Substitution | 697695 | 1028.91 | 28.00 | 27.03 | 0.97 | After |
| REGRESSION.HCC1395_tumor.L008 | GAA | Context | Base Insertion | 207542 | 6.30 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | GAA | Context | Base Deletion | 207542 | 9.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | GAC | Context | Base Insertion | 117742 | 2.44 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | GAC | Context | Base Deletion | 117742 | 7.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | GAG | Context | Base Insertion | 205758 | 1.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | GAG | Context | Base Deletion | 205758 | 12.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | GAT | Context | Base Insertion | 124420 | 2.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | GAT | Context | Base Deletion | 124420 | 2.42 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | GC | Context | Base Substitution | 659940 | 1479.73 | 26.00 | 25.96 | 0.04 | After |
| REGRESSION.HCC1395_tumor.L008 | GCA | Context | Base Insertion | 202633 | 5.37 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | GCA | Context | Base Deletion | 202633 | 7.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | GCC | Context | Base Insertion | 199098 | 3.82 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | GCC | Context | Base Deletion | 199098 | 9.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | GCG | Context | Base Insertion | 49327 | 2.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | GCG | Context | Base Deletion | 49327 | 4.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | GCT | Context | Base Insertion | 208821 | 4.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | GCT | Context | Base Deletion | 208821 | 4.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | GG | Context | Base Substitution | 786927 | 700.66 | 30.00 | 28.08 | 1.92 | After |
| REGRESSION.HCC1395_tumor.L008 | GGA | Context | Base Insertion | 213597 | 18.74 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L008 | GGA | Context | Base Deletion | 213597 | 12.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | GGC | Context | Base Insertion | 195862 | 5.10 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | GGC | Context | Base Deletion | 195862 | 6.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | GGG | Context | Base Insertion | 217765 | 10.31 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | GGG | Context | Base Deletion | 217765 | 23.37 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L008 | GGT | Context | Base Insertion | 157765 | 3.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | GGT | Context | Base Deletion | 157765 | 3.79 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | GT | Context | Base Substitution | 588444 | 1013.96 | 28.00 | 26.88 | 1.12 | After |
| REGRESSION.HCC1395_tumor.L008 | GTA | Context | Base Insertion | 100817 | 1.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | GTA | Context | Base Deletion | 100817 | 1.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | GTC | Context | Base Insertion | 126542 | 1.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | GTC | Context | Base Deletion | 126542 | 3.47 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | GTG | Context | Base Insertion | 199603 | 12.82 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | GTG | Context | Base Deletion | 199603 | 35.02 | 43.00 | 45.00 | -2.00 | After |
| REGRESSION.HCC1395_tumor.L008 | GTT | Context | Base Insertion | 148533 | 3.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | GTT | Context | Base Deletion | 148533 | 16.14 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L008 | TA | Context | Base Substitution | 483567 | 1184.27 | 26.00 | 24.97 | 1.03 | After |
| REGRESSION.HCC1395_tumor.L008 | TAA | Context | Base Insertion | 150119 | 10.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | TAA | Context | Base Deletion | 150119 | 15.22 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L008 | TAC | Context | Base Insertion | 93201 | 1.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | TAC | Context | Base Deletion | 93201 | 4.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | TAG | Context | Base Insertion | 96053 | 2.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | TAG | Context | Base Deletion | 96053 | 0.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | TAT | Context | Base Insertion | 128848 | 1.85 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | TAT | Context | Base Deletion | 128848 | 5.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | TC | Context | Base Substitution | 645400 | 1660.56 | 26.00 | 26.11 | -0.11 | After |
| REGRESSION.HCC1395_tumor.L008 | TCA | Context | Base Insertion | 194774 | 5.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | TCA | Context | Base Deletion | 194774 | 15.58 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L008 | TCC | Context | Base Insertion | 200924 | 24.96 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L008 | TCC | Context | Base Deletion | 200924 | 9.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | TCG | Context | Base Insertion | 26018 | 0.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | TCG | Context | Base Deletion | 26018 | 0.21 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | TCT | Context | Base Insertion | 222477 | 3.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | TCT | Context | Base Deletion | 222477 | 13.17 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | TG | Context | Base Substitution | 840561 | 344.98 | 33.00 | 29.36 | 3.64 | After |
| REGRESSION.HCC1395_tumor.L008 | TGA | Context | Base Insertion | 202573 | 1.79 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | TGA | Context | Base Deletion | 202573 | 6.51 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | TGC | Context | Base Insertion | 188546 | 4.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | TGC | Context | Base Deletion | 188546 | 2.94 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | TGG | Context | Base Insertion | 240727 | 4.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | TGG | Context | Base Deletion | 240727 | 7.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | TGT | Context | Base Insertion | 209958 | 13.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | TGT | Context | Base Deletion | 209958 | 41.40 | 43.00 | 45.00 | -2.00 | After |
| REGRESSION.HCC1395_tumor.L008 | TT | Context | Base Substitution | 841692 | 964.33 | 29.00 | 27.59 | 1.41 | After |
| REGRESSION.HCC1395_tumor.L008 | TTA | Context | Base Insertion | 147846 | 6.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | TTA | Context | Base Deletion | 147846 | 8.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | TTC | Context | Base Insertion | 192921 | 1.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | TTC | Context | Base Deletion | 192921 | 13.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | TTG | Context | Base Insertion | 169959 | 5.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | TTG | Context | Base Deletion | 169959 | 9.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | TTT | Context | Base Insertion | 295511 | 42.62 | 43.00 | 45.00 | -2.00 | After |
| REGRESSION.HCC1395_tumor.L008 | TTT | Context | Base Deletion | 295511 | 186.78 | 37.00 | 45.00 | -8.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -1 | Cycle | Base Substitution | 38344 | 161.79 | 24.00 | 23.34 | 0.66 | After |
| REGRESSION.HCC1395_tumor.L008 | -10 | Cycle | Base Substitution | 38700 | 60.95 | 28.00 | 27.69 | 0.31 | After |
| REGRESSION.HCC1395_tumor.L008 | -10 | Cycle | Base Insertion | 38700 | 0.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -10 | Cycle | Base Deletion | 38700 | 3.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -100 | Cycle | Base Substitution | 36325 | 75.03 | 27.00 | 26.52 | 0.48 | After |
| REGRESSION.HCC1395_tumor.L008 | -100 | Cycle | Base Insertion | 36054 | 3.42 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -100 | Cycle | Base Deletion | 36054 | 4.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -101 | Cycle | Base Substitution | 36291 | 91.70 | 26.00 | 25.66 | 0.34 | After |
| REGRESSION.HCC1395_tumor.L008 | -101 | Cycle | Base Insertion | 36034 | 1.36 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -101 | Cycle | Base Deletion | 36034 | 3.48 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -102 | Cycle | Base Substitution | 36303 | 62.71 | 27.00 | 26.59 | 0.41 | After |
| REGRESSION.HCC1395_tumor.L008 | -102 | Cycle | Base Insertion | 36032 | 1.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -102 | Cycle | Base Deletion | 36032 | 3.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -103 | Cycle | Base Substitution | 36083 | 85.20 | 26.00 | 25.82 | 0.18 | After |
| REGRESSION.HCC1395_tumor.L008 | -103 | Cycle | Base Insertion | 35803 | 0.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -103 | Cycle | Base Deletion | 35803 | 3.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -104 | Cycle | Base Substitution | 35961 | 79.02 | 27.00 | 26.48 | 0.52 | After |
| REGRESSION.HCC1395_tumor.L008 | -104 | Cycle | Base Insertion | 35653 | 2.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -104 | Cycle | Base Deletion | 35653 | 3.21 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -105 | Cycle | Base Substitution | 36059 | 87.35 | 26.00 | 26.70 | -0.70 | After |
| REGRESSION.HCC1395_tumor.L008 | -105 | Cycle | Base Insertion | 35746 | 0.38 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -105 | Cycle | Base Deletion | 35746 | 3.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -106 | Cycle | Base Substitution | 35784 | 62.56 | 27.00 | 26.42 | 0.58 | After |
| REGRESSION.HCC1395_tumor.L008 | -106 | Cycle | Base Insertion | 35490 | 0.94 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -106 | Cycle | Base Deletion | 35490 | 2.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -107 | Cycle | Base Substitution | 35783 | 80.12 | 26.00 | 26.35 | -0.35 | After |
| REGRESSION.HCC1395_tumor.L008 | -107 | Cycle | Base Insertion | 35483 | 0.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -107 | Cycle | Base Deletion | 35483 | 1.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -108 | Cycle | Base Substitution | 35778 | 81.01 | 26.00 | 25.78 | 0.22 | After |
| REGRESSION.HCC1395_tumor.L008 | -108 | Cycle | Base Insertion | 35476 | 3.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -108 | Cycle | Base Deletion | 35476 | 2.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -109 | Cycle | Base Substitution | 35773 | 90.95 | 26.00 | 26.37 | -0.37 | After |
| REGRESSION.HCC1395_tumor.L008 | -109 | Cycle | Base Insertion | 35451 | 0.79 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -109 | Cycle | Base Deletion | 35451 | 1.95 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -11 | Cycle | Base Substitution | 38746 | 61.47 | 28.00 | 27.49 | 0.51 | After |
| REGRESSION.HCC1395_tumor.L008 | -11 | Cycle | Base Insertion | 38746 | 1.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -11 | Cycle | Base Deletion | 38746 | 4.81 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -110 | Cycle | Base Substitution | 35637 | 73.05 | 27.00 | 26.51 | 0.49 | After |
| REGRESSION.HCC1395_tumor.L008 | -110 | Cycle | Base Insertion | 35279 | 1.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -110 | Cycle | Base Deletion | 35279 | 2.94 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -111 | Cycle | Base Substitution | 35546 | 75.01 | 27.00 | 26.45 | 0.55 | After |
| REGRESSION.HCC1395_tumor.L008 | -111 | Cycle | Base Insertion | 35177 | 1.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -111 | Cycle | Base Deletion | 35177 | 3.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -112 | Cycle | Base Substitution | 35549 | 88.76 | 26.00 | 25.77 | 0.23 | After |
| REGRESSION.HCC1395_tumor.L008 | -112 | Cycle | Base Insertion | 35191 | 1.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -112 | Cycle | Base Deletion | 35191 | 2.31 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -113 | Cycle | Base Substitution | 35387 | 99.01 | 26.00 | 26.10 | -0.10 | After |
| REGRESSION.HCC1395_tumor.L008 | -113 | Cycle | Base Insertion | 35024 | 2.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -113 | Cycle | Base Deletion | 35024 | 2.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -114 | Cycle | Base Substitution | 35134 | 69.84 | 27.00 | 26.45 | 0.55 | After |
| REGRESSION.HCC1395_tumor.L008 | -114 | Cycle | Base Insertion | 34762 | 1.37 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -114 | Cycle | Base Deletion | 34762 | 2.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -115 | Cycle | Base Substitution | 35180 | 73.61 | 27.00 | 26.65 | 0.35 | After |
| REGRESSION.HCC1395_tumor.L008 | -115 | Cycle | Base Insertion | 34796 | 1.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -115 | Cycle | Base Deletion | 34796 | 3.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -116 | Cycle | Base Substitution | 35070 | 84.50 | 26.00 | 26.20 | -0.20 | After |
| REGRESSION.HCC1395_tumor.L008 | -116 | Cycle | Base Insertion | 34663 | 0.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -116 | Cycle | Base Deletion | 34663 | 3.31 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -117 | Cycle | Base Substitution | 34927 | 84.58 | 26.00 | 26.27 | -0.27 | After |
| REGRESSION.HCC1395_tumor.L008 | -117 | Cycle | Base Insertion | 34533 | 1.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -117 | Cycle | Base Deletion | 34533 | 2.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -118 | Cycle | Base Substitution | 34869 | 79.01 | 26.00 | 26.32 | -0.32 | After |
| REGRESSION.HCC1395_tumor.L008 | -118 | Cycle | Base Insertion | 34483 | 0.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -118 | Cycle | Base Deletion | 34483 | 2.88 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -119 | Cycle | Base Substitution | 34803 | 111.22 | 25.00 | 26.30 | -1.30 | After |
| REGRESSION.HCC1395_tumor.L008 | -119 | Cycle | Base Insertion | 34408 | 1.55 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -119 | Cycle | Base Deletion | 34408 | 3.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -12 | Cycle | Base Substitution | 38656 | 49.91 | 28.00 | 27.52 | 0.48 | After |
| REGRESSION.HCC1395_tumor.L008 | -12 | Cycle | Base Insertion | 38656 | 0.46 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -12 | Cycle | Base Deletion | 38656 | 3.84 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -120 | Cycle | Base Substitution | 34784 | 89.72 | 26.00 | 25.72 | 0.28 | After |
| REGRESSION.HCC1395_tumor.L008 | -120 | Cycle | Base Insertion | 34407 | 1.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -120 | Cycle | Base Deletion | 34407 | 3.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -121 | Cycle | Base Substitution | 34495 | 81.29 | 26.00 | 26.24 | -0.24 | After |
| REGRESSION.HCC1395_tumor.L008 | -121 | Cycle | Base Insertion | 34112 | 1.07 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -121 | Cycle | Base Deletion | 34112 | 2.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -122 | Cycle | Base Substitution | 34541 | 82.18 | 26.00 | 26.37 | -0.37 | After |
| REGRESSION.HCC1395_tumor.L008 | -122 | Cycle | Base Insertion | 34153 | 2.07 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -122 | Cycle | Base Deletion | 34153 | 2.81 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -123 | Cycle | Base Substitution | 34451 | 78.68 | 26.00 | 26.34 | -0.34 | After |
| REGRESSION.HCC1395_tumor.L008 | -123 | Cycle | Base Insertion | 34055 | 1.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -123 | Cycle | Base Deletion | 34055 | 2.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -124 | Cycle | Base Substitution | 34286 | 77.74 | 26.00 | 26.16 | -0.16 | After |
| REGRESSION.HCC1395_tumor.L008 | -124 | Cycle | Base Insertion | 33898 | 0.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -124 | Cycle | Base Deletion | 33898 | 2.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -125 | Cycle | Base Substitution | 34327 | 103.60 | 26.00 | 26.17 | -0.17 | After |
| REGRESSION.HCC1395_tumor.L008 | -125 | Cycle | Base Insertion | 33929 | 1.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -125 | Cycle | Base Deletion | 33929 | 2.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -126 | Cycle | Base Substitution | 34114 | 87.25 | 26.00 | 26.11 | -0.11 | After |
| REGRESSION.HCC1395_tumor.L008 | -126 | Cycle | Base Insertion | 33710 | 0.72 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -126 | Cycle | Base Deletion | 33710 | 2.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -127 | Cycle | Base Substitution | 34093 | 87.90 | 26.00 | 26.08 | -0.08 | After |
| REGRESSION.HCC1395_tumor.L008 | -127 | Cycle | Base Insertion | 33715 | 1.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -127 | Cycle | Base Deletion | 33715 | 2.86 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -128 | Cycle | Base Substitution | 33850 | 84.85 | 26.00 | 26.20 | -0.20 | After |
| REGRESSION.HCC1395_tumor.L008 | -128 | Cycle | Base Insertion | 33475 | 1.21 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -128 | Cycle | Base Deletion | 33475 | 3.02 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -129 | Cycle | Base Substitution | 33730 | 85.02 | 26.00 | 26.17 | -0.17 | After |
| REGRESSION.HCC1395_tumor.L008 | -129 | Cycle | Base Insertion | 33342 | 1.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -129 | Cycle | Base Deletion | 33342 | 2.09 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -13 | Cycle | Base Substitution | 38664 | 66.34 | 28.00 | 27.69 | 0.31 | After |
| REGRESSION.HCC1395_tumor.L008 | -13 | Cycle | Base Insertion | 38664 | 2.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -13 | Cycle | Base Deletion | 38664 | 4.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -130 | Cycle | Base Substitution | 33776 | 80.10 | 26.00 | 26.27 | -0.27 | After |
| REGRESSION.HCC1395_tumor.L008 | -130 | Cycle | Base Insertion | 33389 | 1.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -130 | Cycle | Base Deletion | 33389 | 2.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -131 | Cycle | Base Substitution | 33631 | 65.11 | 27.00 | 26.24 | 0.76 | After |
| REGRESSION.HCC1395_tumor.L008 | -131 | Cycle | Base Insertion | 33233 | 1.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -131 | Cycle | Base Deletion | 33233 | 2.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -132 | Cycle | Base Substitution | 33556 | 81.60 | 26.00 | 26.17 | -0.17 | After |
| REGRESSION.HCC1395_tumor.L008 | -132 | Cycle | Base Insertion | 33152 | 1.21 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -132 | Cycle | Base Deletion | 33152 | 1.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -133 | Cycle | Base Substitution | 33472 | 73.17 | 27.00 | 26.43 | 0.57 | After |
| REGRESSION.HCC1395_tumor.L008 | -133 | Cycle | Base Insertion | 33068 | 0.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -133 | Cycle | Base Deletion | 33068 | 1.82 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -134 | Cycle | Base Substitution | 33371 | 86.24 | 26.00 | 26.18 | -0.18 | After |
| REGRESSION.HCC1395_tumor.L008 | -134 | Cycle | Base Insertion | 32933 | 0.30 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -134 | Cycle | Base Deletion | 32933 | 2.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -135 | Cycle | Base Substitution | 33286 | 71.50 | 27.00 | 26.37 | 0.63 | After |
| REGRESSION.HCC1395_tumor.L008 | -135 | Cycle | Base Insertion | 32850 | 0.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -135 | Cycle | Base Deletion | 32850 | 2.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -136 | Cycle | Base Substitution | 33068 | 74.07 | 26.00 | 26.05 | -0.05 | After |
| REGRESSION.HCC1395_tumor.L008 | -136 | Cycle | Base Insertion | 32628 | 0.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -136 | Cycle | Base Deletion | 32628 | 1.82 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -137 | Cycle | Base Substitution | 33077 | 82.62 | 26.00 | 26.37 | -0.37 | After |
| REGRESSION.HCC1395_tumor.L008 | -137 | Cycle | Base Insertion | 32610 | 1.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -137 | Cycle | Base Deletion | 32610 | 2.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -138 | Cycle | Base Substitution | 32935 | 73.32 | 26.00 | 26.27 | -0.27 | After |
| REGRESSION.HCC1395_tumor.L008 | -138 | Cycle | Base Insertion | 32481 | 0.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -138 | Cycle | Base Deletion | 32481 | 1.98 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -139 | Cycle | Base Substitution | 32836 | 74.71 | 26.00 | 26.36 | -0.36 | After |
| REGRESSION.HCC1395_tumor.L008 | -139 | Cycle | Base Insertion | 32390 | 0.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -139 | Cycle | Base Deletion | 32390 | 1.18 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -14 | Cycle | Base Substitution | 38544 | 56.46 | 28.00 | 27.69 | 0.31 | After |
| REGRESSION.HCC1395_tumor.L008 | -14 | Cycle | Base Insertion | 38544 | 1.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -14 | Cycle | Base Deletion | 38544 | 4.46 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -140 | Cycle | Base Substitution | 32674 | 68.64 | 27.00 | 26.13 | 0.87 | After |
| REGRESSION.HCC1395_tumor.L008 | -140 | Cycle | Base Insertion | 32168 | 0.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -140 | Cycle | Base Deletion | 32168 | 0.81 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -141 | Cycle | Base Substitution | 32613 | 62.36 | 27.00 | 26.28 | 0.72 | After |
| REGRESSION.HCC1395_tumor.L008 | -141 | Cycle | Base Insertion | 32089 | 0.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -141 | Cycle | Base Deletion | 32089 | 1.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -142 | Cycle | Base Substitution | 32409 | 64.54 | 27.00 | 26.06 | 0.94 | After |
| REGRESSION.HCC1395_tumor.L008 | -142 | Cycle | Base Insertion | 31783 | 0.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -142 | Cycle | Base Deletion | 31783 | 1.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -143 | Cycle | Base Substitution | 32346 | 63.46 | 27.00 | 26.37 | 0.63 | After |
| REGRESSION.HCC1395_tumor.L008 | -143 | Cycle | Base Insertion | 31669 | 0.00 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -143 | Cycle | Base Deletion | 31669 | 1.07 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -144 | Cycle | Base Substitution | 32232 | 52.14 | 27.00 | 26.15 | 0.85 | After |
| REGRESSION.HCC1395_tumor.L008 | -144 | Cycle | Base Insertion | 31499 | 1.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -144 | Cycle | Base Deletion | 31499 | 0.55 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -145 | Cycle | Base Substitution | 32085 | 53.03 | 27.00 | 26.21 | 0.79 | After |
| REGRESSION.HCC1395_tumor.L008 | -145 | Cycle | Base Insertion | 24717 | 0.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -145 | Cycle | Base Deletion | 24717 | 0.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -146 | Cycle | Base Substitution | 31870 | 25.34 | 28.00 | 26.39 | 1.61 | After |
| REGRESSION.HCC1395_tumor.L008 | -146 | Cycle | Base Insertion | 24646 | 3.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -146 | Cycle | Base Deletion | 24646 | 0.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -147 | Cycle | Base Substitution | 31689 | 20.08 | 26.00 | 22.33 | 3.67 | After |
| REGRESSION.HCC1395_tumor.L008 | -148 | Cycle | Base Substitution | 31442 | 19.97 | 24.00 | 16.05 | 7.95 | After |
| REGRESSION.HCC1395_tumor.L008 | -149 | Cycle | Base Substitution | 19627 | 18.08 | 22.00 | 14.19 | 7.81 | After |
| REGRESSION.HCC1395_tumor.L008 | -15 | Cycle | Base Substitution | 38805 | 41.89 | 29.00 | 28.05 | 0.95 | After |
| REGRESSION.HCC1395_tumor.L008 | -15 | Cycle | Base Insertion | 38805 | 1.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -15 | Cycle | Base Deletion | 38805 | 3.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -150 | Cycle | Base Substitution | 6945 | 12.09 | 27.00 | 26.65 | 0.35 | After |
| REGRESSION.HCC1395_tumor.L008 | -16 | Cycle | Base Substitution | 38739 | 57.12 | 28.00 | 27.63 | 0.37 | After |
| REGRESSION.HCC1395_tumor.L008 | -16 | Cycle | Base Insertion | 38739 | 2.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -16 | Cycle | Base Deletion | 38739 | 3.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -17 | Cycle | Base Substitution | 38601 | 56.48 | 28.00 | 27.38 | 0.62 | After |
| REGRESSION.HCC1395_tumor.L008 | -17 | Cycle | Base Insertion | 38601 | 2.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -17 | Cycle | Base Deletion | 38601 | 4.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -18 | Cycle | Base Substitution | 38626 | 47.25 | 28.00 | 27.82 | 0.18 | After |
| REGRESSION.HCC1395_tumor.L008 | -18 | Cycle | Base Insertion | 38626 | 1.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -18 | Cycle | Base Deletion | 38626 | 4.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -19 | Cycle | Base Substitution | 38591 | 63.86 | 28.00 | 27.51 | 0.49 | After |
| REGRESSION.HCC1395_tumor.L008 | -19 | Cycle | Base Insertion | 38591 | 3.26 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -19 | Cycle | Base Deletion | 38591 | 3.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -2 | Cycle | Base Substitution | 38916 | 107.88 | 26.00 | 25.51 | 0.49 | After |
| REGRESSION.HCC1395_tumor.L008 | -20 | Cycle | Base Substitution | 38616 | 57.95 | 28.00 | 27.69 | 0.31 | After |
| REGRESSION.HCC1395_tumor.L008 | -20 | Cycle | Base Insertion | 38616 | 2.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -20 | Cycle | Base Deletion | 38616 | 4.42 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -21 | Cycle | Base Substitution | 38454 | 39.64 | 29.00 | 27.74 | 1.26 | After |
| REGRESSION.HCC1395_tumor.L008 | -21 | Cycle | Base Insertion | 38454 | 3.02 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -21 | Cycle | Base Deletion | 38454 | 3.44 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -22 | Cycle | Base Substitution | 38634 | 60.16 | 28.00 | 27.43 | 0.57 | After |
| REGRESSION.HCC1395_tumor.L008 | -22 | Cycle | Base Insertion | 38634 | 3.46 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -22 | Cycle | Base Deletion | 38634 | 4.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -23 | Cycle | Base Substitution | 38588 | 58.78 | 28.00 | 27.54 | 0.46 | After |
| REGRESSION.HCC1395_tumor.L008 | -23 | Cycle | Base Insertion | 38588 | 2.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -23 | Cycle | Base Deletion | 38588 | 3.88 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -24 | Cycle | Base Substitution | 38553 | 50.75 | 28.00 | 27.69 | 0.31 | After |
| REGRESSION.HCC1395_tumor.L008 | -24 | Cycle | Base Insertion | 38553 | 2.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -24 | Cycle | Base Deletion | 38553 | 4.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -25 | Cycle | Base Substitution | 38529 | 54.02 | 28.00 | 27.86 | 0.14 | After |
| REGRESSION.HCC1395_tumor.L008 | -25 | Cycle | Base Insertion | 38529 | 3.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -25 | Cycle | Base Deletion | 38529 | 2.96 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -26 | Cycle | Base Substitution | 38538 | 63.12 | 27.00 | 26.58 | 0.42 | After |
| REGRESSION.HCC1395_tumor.L008 | -26 | Cycle | Base Insertion | 38538 | 4.96 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -26 | Cycle | Base Deletion | 38538 | 3.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -27 | Cycle | Base Substitution | 38572 | 52.32 | 28.00 | 26.54 | 1.46 | After |
| REGRESSION.HCC1395_tumor.L008 | -27 | Cycle | Base Insertion | 38572 | 3.09 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -27 | Cycle | Base Deletion | 38572 | 3.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -28 | Cycle | Base Substitution | 38410 | 61.57 | 28.00 | 27.04 | 0.96 | After |
| REGRESSION.HCC1395_tumor.L008 | -28 | Cycle | Base Insertion | 38409 | 3.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -28 | Cycle | Base Deletion | 38409 | 4.42 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -29 | Cycle | Base Substitution | 38581 | 58.06 | 28.00 | 26.44 | 1.56 | After |
| REGRESSION.HCC1395_tumor.L008 | -29 | Cycle | Base Insertion | 38578 | 3.17 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -29 | Cycle | Base Deletion | 38578 | 4.44 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -3 | Cycle | Base Substitution | 38898 | 129.51 | 25.00 | 26.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -30 | Cycle | Base Substitution | 38515 | 57.48 | 28.00 | 26.70 | 1.30 | After |
| REGRESSION.HCC1395_tumor.L008 | -30 | Cycle | Base Insertion | 38511 | 2.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -30 | Cycle | Base Deletion | 38511 | 5.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -31 | Cycle | Base Substitution | 38451 | 74.48 | 27.00 | 26.41 | 0.59 | After |
| REGRESSION.HCC1395_tumor.L008 | -31 | Cycle | Base Insertion | 38444 | 3.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -31 | Cycle | Base Deletion | 38444 | 5.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -32 | Cycle | Base Substitution | 38419 | 42.26 | 29.00 | 27.17 | 1.83 | After |
| REGRESSION.HCC1395_tumor.L008 | -32 | Cycle | Base Insertion | 38412 | 1.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -32 | Cycle | Base Deletion | 38412 | 4.73 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -33 | Cycle | Base Substitution | 38487 | 62.90 | 27.00 | 26.77 | 0.23 | After |
| REGRESSION.HCC1395_tumor.L008 | -33 | Cycle | Base Insertion | 38482 | 2.72 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -33 | Cycle | Base Deletion | 38482 | 3.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -34 | Cycle | Base Substitution | 38472 | 50.83 | 28.00 | 26.82 | 1.18 | After |
| REGRESSION.HCC1395_tumor.L008 | -34 | Cycle | Base Insertion | 38465 | 1.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -34 | Cycle | Base Deletion | 38465 | 3.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -35 | Cycle | Base Substitution | 38423 | 52.58 | 28.00 | 27.02 | 0.98 | After |
| REGRESSION.HCC1395_tumor.L008 | -35 | Cycle | Base Insertion | 38420 | 2.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -35 | Cycle | Base Deletion | 38420 | 4.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -36 | Cycle | Base Substitution | 38591 | 68.42 | 27.00 | 26.82 | 0.18 | After |
| REGRESSION.HCC1395_tumor.L008 | -36 | Cycle | Base Insertion | 38586 | 1.55 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -36 | Cycle | Base Deletion | 38586 | 4.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -37 | Cycle | Base Substitution | 38378 | 53.57 | 28.00 | 27.12 | 0.88 | After |
| REGRESSION.HCC1395_tumor.L008 | -37 | Cycle | Base Insertion | 38374 | 1.29 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -37 | Cycle | Base Deletion | 38374 | 3.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -38 | Cycle | Base Substitution | 38364 | 64.78 | 27.00 | 26.94 | 0.06 | After |
| REGRESSION.HCC1395_tumor.L008 | -38 | Cycle | Base Insertion | 38361 | 2.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -38 | Cycle | Base Deletion | 38361 | 5.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -39 | Cycle | Base Substitution | 38337 | 63.75 | 27.00 | 26.94 | 0.06 | After |
| REGRESSION.HCC1395_tumor.L008 | -39 | Cycle | Base Insertion | 38335 | 2.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -39 | Cycle | Base Deletion | 38335 | 4.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -4 | Cycle | Base Substitution | 38752 | 81.88 | 27.00 | 26.16 | 0.84 | After |
| REGRESSION.HCC1395_tumor.L008 | -40 | Cycle | Base Substitution | 38330 | 55.34 | 28.00 | 26.95 | 1.05 | After |
| REGRESSION.HCC1395_tumor.L008 | -40 | Cycle | Base Insertion | 38329 | 2.37 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -40 | Cycle | Base Deletion | 38329 | 5.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -41 | Cycle | Base Substitution | 38393 | 52.73 | 28.00 | 26.80 | 1.20 | After |
| REGRESSION.HCC1395_tumor.L008 | -41 | Cycle | Base Insertion | 38391 | 3.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -41 | Cycle | Base Deletion | 38391 | 4.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -42 | Cycle | Base Substitution | 38315 | 47.76 | 28.00 | 26.87 | 1.13 | After |
| REGRESSION.HCC1395_tumor.L008 | -42 | Cycle | Base Insertion | 38312 | 1.46 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -42 | Cycle | Base Deletion | 38312 | 4.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -43 | Cycle | Base Substitution | 38393 | 57.61 | 28.00 | 26.68 | 1.32 | After |
| REGRESSION.HCC1395_tumor.L008 | -43 | Cycle | Base Insertion | 38390 | 1.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -43 | Cycle | Base Deletion | 38390 | 4.26 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -44 | Cycle | Base Substitution | 38432 | 69.03 | 27.00 | 26.54 | 0.46 | After |
| REGRESSION.HCC1395_tumor.L008 | -44 | Cycle | Base Insertion | 38423 | 1.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -44 | Cycle | Base Deletion | 38423 | 3.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -45 | Cycle | Base Substitution | 38281 | 44.59 | 28.00 | 26.74 | 1.26 | After |
| REGRESSION.HCC1395_tumor.L008 | -45 | Cycle | Base Insertion | 38266 | 1.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -45 | Cycle | Base Deletion | 38266 | 3.72 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -46 | Cycle | Base Substitution | 38319 | 63.26 | 27.00 | 26.86 | 0.14 | After |
| REGRESSION.HCC1395_tumor.L008 | -46 | Cycle | Base Insertion | 38306 | 2.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -46 | Cycle | Base Deletion | 38306 | 3.98 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -47 | Cycle | Base Substitution | 38265 | 68.26 | 27.00 | 27.08 | -0.08 | After |
| REGRESSION.HCC1395_tumor.L008 | -47 | Cycle | Base Insertion | 38252 | 2.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -47 | Cycle | Base Deletion | 38252 | 4.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -48 | Cycle | Base Substitution | 38342 | 66.28 | 27.00 | 26.84 | 0.16 | After |
| REGRESSION.HCC1395_tumor.L008 | -48 | Cycle | Base Insertion | 38334 | 1.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -48 | Cycle | Base Deletion | 38334 | 4.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -49 | Cycle | Base Substitution | 38267 | 69.90 | 27.00 | 26.72 | 0.28 | After |
| REGRESSION.HCC1395_tumor.L008 | -49 | Cycle | Base Insertion | 38258 | 1.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -49 | Cycle | Base Deletion | 38258 | 3.96 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -5 | Cycle | Base Substitution | 38792 | 67.37 | 27.00 | 26.72 | 0.28 | After |
| REGRESSION.HCC1395_tumor.L008 | -5 | Cycle | Base Insertion | 38792 | 1.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -5 | Cycle | Base Deletion | 38792 | 1.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -50 | Cycle | Base Substitution | 38342 | 57.88 | 28.00 | 26.97 | 1.03 | After |
| REGRESSION.HCC1395_tumor.L008 | -50 | Cycle | Base Insertion | 38329 | 3.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -50 | Cycle | Base Deletion | 38329 | 4.47 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -51 | Cycle | Base Substitution | 38217 | 50.75 | 28.00 | 27.11 | 0.89 | After |
| REGRESSION.HCC1395_tumor.L008 | -51 | Cycle | Base Insertion | 38199 | 0.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -51 | Cycle | Base Deletion | 38199 | 4.07 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -52 | Cycle | Base Substitution | 38312 | 60.62 | 28.00 | 27.18 | 0.82 | After |
| REGRESSION.HCC1395_tumor.L008 | -52 | Cycle | Base Insertion | 38282 | 1.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -52 | Cycle | Base Deletion | 38282 | 4.51 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -53 | Cycle | Base Substitution | 38277 | 73.96 | 27.00 | 26.90 | 0.10 | After |
| REGRESSION.HCC1395_tumor.L008 | -53 | Cycle | Base Insertion | 38247 | 1.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -53 | Cycle | Base Deletion | 38247 | 4.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -54 | Cycle | Base Substitution | 38268 | 60.80 | 27.00 | 26.86 | 0.14 | After |
| REGRESSION.HCC1395_tumor.L008 | -54 | Cycle | Base Insertion | 38227 | 1.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -54 | Cycle | Base Deletion | 38227 | 3.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -55 | Cycle | Base Substitution | 38160 | 85.92 | 26.00 | 26.71 | -0.71 | After |
| REGRESSION.HCC1395_tumor.L008 | -55 | Cycle | Base Insertion | 38117 | 1.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -55 | Cycle | Base Deletion | 38117 | 4.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -56 | Cycle | Base Substitution | 38268 | 66.14 | 27.00 | 26.90 | 0.10 | After |
| REGRESSION.HCC1395_tumor.L008 | -56 | Cycle | Base Insertion | 38228 | 1.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -56 | Cycle | Base Deletion | 38228 | 4.18 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -57 | Cycle | Base Substitution | 38113 | 51.50 | 28.00 | 26.84 | 1.16 | After |
| REGRESSION.HCC1395_tumor.L008 | -57 | Cycle | Base Insertion | 38069 | 2.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -57 | Cycle | Base Deletion | 38069 | 4.17 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -58 | Cycle | Base Substitution | 38161 | 65.55 | 28.00 | 27.01 | 0.99 | After |
| REGRESSION.HCC1395_tumor.L008 | -58 | Cycle | Base Insertion | 38112 | 2.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -58 | Cycle | Base Deletion | 38112 | 4.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -59 | Cycle | Base Substitution | 38234 | 80.47 | 27.00 | 26.91 | 0.09 | After |
| REGRESSION.HCC1395_tumor.L008 | -59 | Cycle | Base Insertion | 38190 | 2.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -59 | Cycle | Base Deletion | 38190 | 5.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -6 | Cycle | Base Substitution | 38781 | 86.58 | 26.00 | 26.51 | -0.51 | After |
| REGRESSION.HCC1395_tumor.L008 | -6 | Cycle | Base Insertion | 38781 | 0.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -6 | Cycle | Base Deletion | 38781 | 3.01 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -60 | Cycle | Base Substitution | 38269 | 78.14 | 27.00 | 27.02 | -0.02 | After |
| REGRESSION.HCC1395_tumor.L008 | -60 | Cycle | Base Insertion | 38214 | 3.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -60 | Cycle | Base Deletion | 38214 | 5.10 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -61 | Cycle | Base Substitution | 38164 | 61.23 | 27.00 | 26.90 | 0.10 | After |
| REGRESSION.HCC1395_tumor.L008 | -61 | Cycle | Base Insertion | 38099 | 2.30 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -61 | Cycle | Base Deletion | 38099 | 5.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -62 | Cycle | Base Substitution | 38232 | 60.02 | 27.00 | 26.82 | 0.18 | After |
| REGRESSION.HCC1395_tumor.L008 | -62 | Cycle | Base Insertion | 38164 | 3.09 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -62 | Cycle | Base Deletion | 38164 | 5.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -63 | Cycle | Base Substitution | 38123 | 80.23 | 27.00 | 26.20 | 0.80 | After |
| REGRESSION.HCC1395_tumor.L008 | -63 | Cycle | Base Insertion | 38038 | 2.47 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -63 | Cycle | Base Deletion | 38038 | 5.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -64 | Cycle | Base Substitution | 38030 | 65.42 | 27.00 | 26.89 | 0.11 | After |
| REGRESSION.HCC1395_tumor.L008 | -64 | Cycle | Base Insertion | 37944 | 2.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -64 | Cycle | Base Deletion | 37944 | 3.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -65 | Cycle | Base Substitution | 37955 | 78.75 | 27.00 | 26.92 | 0.08 | After |
| REGRESSION.HCC1395_tumor.L008 | -65 | Cycle | Base Insertion | 37860 | 1.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -65 | Cycle | Base Deletion | 37860 | 3.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -66 | Cycle | Base Substitution | 37971 | 53.68 | 28.00 | 27.12 | 0.88 | After |
| REGRESSION.HCC1395_tumor.L008 | -66 | Cycle | Base Insertion | 37867 | 1.55 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -66 | Cycle | Base Deletion | 37867 | 3.37 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -67 | Cycle | Base Substitution | 37985 | 52.05 | 28.00 | 27.01 | 0.99 | After |
| REGRESSION.HCC1395_tumor.L008 | -67 | Cycle | Base Insertion | 37880 | 1.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -67 | Cycle | Base Deletion | 37880 | 3.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -68 | Cycle | Base Substitution | 38093 | 76.07 | 27.00 | 26.78 | 0.22 | After |
| REGRESSION.HCC1395_tumor.L008 | -68 | Cycle | Base Insertion | 37987 | 1.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -68 | Cycle | Base Deletion | 37987 | 3.86 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -69 | Cycle | Base Substitution | 38033 | 64.75 | 27.00 | 26.69 | 0.31 | After |
| REGRESSION.HCC1395_tumor.L008 | -69 | Cycle | Base Insertion | 37934 | 2.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -69 | Cycle | Base Deletion | 37934 | 4.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -7 | Cycle | Base Substitution | 38659 | 57.73 | 28.00 | 26.95 | 1.05 | After |
| REGRESSION.HCC1395_tumor.L008 | -7 | Cycle | Base Insertion | 38659 | 0.29 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -7 | Cycle | Base Deletion | 38659 | 2.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -70 | Cycle | Base Substitution | 38018 | 68.11 | 27.00 | 27.20 | -0.20 | After |
| REGRESSION.HCC1395_tumor.L008 | -70 | Cycle | Base Insertion | 37917 | 1.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -70 | Cycle | Base Deletion | 37917 | 4.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -71 | Cycle | Base Substitution | 37775 | 55.87 | 28.00 | 26.73 | 1.27 | After |
| REGRESSION.HCC1395_tumor.L008 | -71 | Cycle | Base Insertion | 37666 | 0.82 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -71 | Cycle | Base Deletion | 37666 | 3.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -72 | Cycle | Base Substitution | 37745 | 69.29 | 27.00 | 26.80 | 0.20 | After |
| REGRESSION.HCC1395_tumor.L008 | -72 | Cycle | Base Insertion | 37623 | 1.71 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -72 | Cycle | Base Deletion | 37623 | 5.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -73 | Cycle | Base Substitution | 37889 | 80.06 | 27.00 | 26.80 | 0.20 | After |
| REGRESSION.HCC1395_tumor.L008 | -73 | Cycle | Base Insertion | 37748 | 0.98 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -73 | Cycle | Base Deletion | 37748 | 4.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -74 | Cycle | Base Substitution | 37803 | 61.99 | 28.00 | 27.17 | 0.83 | After |
| REGRESSION.HCC1395_tumor.L008 | -74 | Cycle | Base Insertion | 37664 | 1.05 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -74 | Cycle | Base Deletion | 37664 | 4.09 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -75 | Cycle | Base Substitution | 37670 | 63.50 | 28.00 | 27.22 | 0.78 | After |
| REGRESSION.HCC1395_tumor.L008 | -75 | Cycle | Base Insertion | 37520 | 1.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -75 | Cycle | Base Deletion | 37520 | 4.86 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -76 | Cycle | Base Substitution | 37623 | 60.16 | 28.00 | 27.12 | 0.88 | After |
| REGRESSION.HCC1395_tumor.L008 | -76 | Cycle | Base Insertion | 37455 | 0.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -76 | Cycle | Base Deletion | 37455 | 4.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -77 | Cycle | Base Substitution | 37508 | 56.86 | 28.00 | 26.64 | 1.36 | After |
| REGRESSION.HCC1395_tumor.L008 | -77 | Cycle | Base Insertion | 37346 | 1.09 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -77 | Cycle | Base Deletion | 37346 | 4.07 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -78 | Cycle | Base Substitution | 37638 | 71.81 | 27.00 | 26.71 | 0.29 | After |
| REGRESSION.HCC1395_tumor.L008 | -78 | Cycle | Base Insertion | 37471 | 0.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -78 | Cycle | Base Deletion | 37471 | 4.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -79 | Cycle | Base Substitution | 37496 | 79.18 | 27.00 | 26.60 | 0.40 | After |
| REGRESSION.HCC1395_tumor.L008 | -79 | Cycle | Base Insertion | 37312 | 0.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -79 | Cycle | Base Deletion | 37312 | 4.18 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -8 | Cycle | Base Substitution | 38732 | 61.64 | 28.00 | 27.19 | 0.81 | After |
| REGRESSION.HCC1395_tumor.L008 | -8 | Cycle | Base Insertion | 38732 | 0.37 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -8 | Cycle | Base Deletion | 38732 | 3.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -80 | Cycle | Base Substitution | 37441 | 64.37 | 28.00 | 27.13 | 0.87 | After |
| REGRESSION.HCC1395_tumor.L008 | -80 | Cycle | Base Insertion | 37254 | 0.88 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -80 | Cycle | Base Deletion | 37254 | 4.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -81 | Cycle | Base Substitution | 37474 | 68.26 | 27.00 | 26.76 | 0.24 | After |
| REGRESSION.HCC1395_tumor.L008 | -81 | Cycle | Base Insertion | 37275 | 0.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -81 | Cycle | Base Deletion | 37275 | 3.38 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -82 | Cycle | Base Substitution | 37405 | 79.46 | 27.00 | 26.64 | 0.36 | After |
| REGRESSION.HCC1395_tumor.L008 | -82 | Cycle | Base Insertion | 37209 | 0.31 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -82 | Cycle | Base Deletion | 37209 | 3.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -83 | Cycle | Base Substitution | 37357 | 76.11 | 27.00 | 26.18 | 0.82 | After |
| REGRESSION.HCC1395_tumor.L008 | -83 | Cycle | Base Insertion | 37150 | 0.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -83 | Cycle | Base Deletion | 37150 | 3.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -84 | Cycle | Base Substitution | 37209 | 69.00 | 27.00 | 26.76 | 0.24 | After |
| REGRESSION.HCC1395_tumor.L008 | -84 | Cycle | Base Insertion | 37001 | 1.56 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -84 | Cycle | Base Deletion | 37001 | 3.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -85 | Cycle | Base Substitution | 37204 | 80.92 | 27.00 | 26.39 | 0.61 | After |
| REGRESSION.HCC1395_tumor.L008 | -85 | Cycle | Base Insertion | 37015 | 0.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -85 | Cycle | Base Deletion | 37015 | 3.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -86 | Cycle | Base Substitution | 37249 | 68.95 | 27.00 | 26.55 | 0.45 | After |
| REGRESSION.HCC1395_tumor.L008 | -86 | Cycle | Base Insertion | 37038 | 0.64 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -86 | Cycle | Base Deletion | 37038 | 2.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -87 | Cycle | Base Substitution | 37160 | 80.50 | 27.00 | 26.47 | 0.53 | After |
| REGRESSION.HCC1395_tumor.L008 | -87 | Cycle | Base Insertion | 36960 | 0.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -87 | Cycle | Base Deletion | 36960 | 2.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -88 | Cycle | Base Substitution | 37138 | 73.78 | 27.00 | 26.57 | 0.43 | After |
| REGRESSION.HCC1395_tumor.L008 | -88 | Cycle | Base Insertion | 36926 | 1.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -88 | Cycle | Base Deletion | 36926 | 3.29 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -89 | Cycle | Base Substitution | 37080 | 67.35 | 27.00 | 26.57 | 0.43 | After |
| REGRESSION.HCC1395_tumor.L008 | -89 | Cycle | Base Insertion | 36861 | 0.81 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -89 | Cycle | Base Deletion | 36861 | 3.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -9 | Cycle | Base Substitution | 38787 | 73.75 | 27.00 | 27.26 | -0.26 | After |
| REGRESSION.HCC1395_tumor.L008 | -9 | Cycle | Base Insertion | 38787 | 0.56 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -9 | Cycle | Base Deletion | 38787 | 3.48 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -90 | Cycle | Base Substitution | 37027 | 79.42 | 27.00 | 26.56 | 0.44 | After |
| REGRESSION.HCC1395_tumor.L008 | -90 | Cycle | Base Insertion | 36800 | 0.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -90 | Cycle | Base Deletion | 36800 | 3.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -91 | Cycle | Base Substitution | 37026 | 77.34 | 27.00 | 26.53 | 0.47 | After |
| REGRESSION.HCC1395_tumor.L008 | -91 | Cycle | Base Insertion | 36793 | 1.61 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -91 | Cycle | Base Deletion | 36793 | 3.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -92 | Cycle | Base Substitution | 36870 | 91.69 | 26.00 | 26.51 | -0.51 | After |
| REGRESSION.HCC1395_tumor.L008 | -92 | Cycle | Base Insertion | 36630 | 0.86 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -92 | Cycle | Base Deletion | 36630 | 2.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -93 | Cycle | Base Substitution | 36823 | 83.78 | 26.00 | 25.88 | 0.12 | After |
| REGRESSION.HCC1395_tumor.L008 | -93 | Cycle | Base Insertion | 36557 | 1.02 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -93 | Cycle | Base Deletion | 36557 | 3.57 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -94 | Cycle | Base Substitution | 36658 | 71.46 | 27.00 | 26.68 | 0.32 | After |
| REGRESSION.HCC1395_tumor.L008 | -94 | Cycle | Base Insertion | 36388 | 0.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -94 | Cycle | Base Deletion | 36388 | 4.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -95 | Cycle | Base Substitution | 36781 | 71.74 | 27.00 | 26.53 | 0.47 | After |
| REGRESSION.HCC1395_tumor.L008 | -95 | Cycle | Base Insertion | 36490 | 2.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -95 | Cycle | Base Deletion | 36490 | 3.85 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -96 | Cycle | Base Substitution | 36636 | 86.06 | 26.00 | 25.99 | 0.01 | After |
| REGRESSION.HCC1395_tumor.L008 | -96 | Cycle | Base Insertion | 36351 | 0.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -96 | Cycle | Base Deletion | 36351 | 2.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -97 | Cycle | Base Substitution | 36583 | 81.86 | 26.00 | 26.62 | -0.62 | After |
| REGRESSION.HCC1395_tumor.L008 | -97 | Cycle | Base Insertion | 36293 | 1.65 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -97 | Cycle | Base Deletion | 36293 | 3.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -98 | Cycle | Base Substitution | 36414 | 78.79 | 27.00 | 26.42 | 0.58 | After |
| REGRESSION.HCC1395_tumor.L008 | -98 | Cycle | Base Insertion | 36145 | 1.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -98 | Cycle | Base Deletion | 36145 | 3.98 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -99 | Cycle | Base Substitution | 36465 | 73.62 | 27.00 | 26.61 | 0.39 | After |
| REGRESSION.HCC1395_tumor.L008 | -99 | Cycle | Base Insertion | 36199 | 2.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | -99 | Cycle | Base Deletion | 36199 | 3.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 1 | Cycle | Base Substitution | 38372 | 84.09 | 26.00 | 25.77 | 0.23 | After |
| REGRESSION.HCC1395_tumor.L008 | 10 | Cycle | Base Substitution | 38748 | 43.24 | 29.00 | 27.58 | 1.42 | After |
| REGRESSION.HCC1395_tumor.L008 | 10 | Cycle | Base Insertion | 38748 | 1.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 10 | Cycle | Base Deletion | 38748 | 3.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 100 | Cycle | Base Substitution | 36276 | 73.71 | 27.00 | 26.81 | 0.19 | After |
| REGRESSION.HCC1395_tumor.L008 | 100 | Cycle | Base Insertion | 36011 | 1.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 100 | Cycle | Base Deletion | 36011 | 3.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 101 | Cycle | Base Substitution | 36321 | 48.31 | 28.00 | 27.43 | 0.57 | After |
| REGRESSION.HCC1395_tumor.L008 | 101 | Cycle | Base Insertion | 36072 | 3.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 101 | Cycle | Base Deletion | 36072 | 3.77 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 102 | Cycle | Base Substitution | 36222 | 51.40 | 28.00 | 27.02 | 0.98 | After |
| REGRESSION.HCC1395_tumor.L008 | 102 | Cycle | Base Insertion | 35955 | 2.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 102 | Cycle | Base Deletion | 35955 | 3.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 103 | Cycle | Base Substitution | 36161 | 66.94 | 27.00 | 26.80 | 0.20 | After |
| REGRESSION.HCC1395_tumor.L008 | 103 | Cycle | Base Insertion | 35871 | 2.17 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 103 | Cycle | Base Deletion | 35871 | 4.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 104 | Cycle | Base Substitution | 36098 | 54.47 | 28.00 | 26.74 | 1.26 | After |
| REGRESSION.HCC1395_tumor.L008 | 104 | Cycle | Base Insertion | 35811 | 1.61 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 104 | Cycle | Base Deletion | 35811 | 3.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 105 | Cycle | Base Substitution | 36032 | 61.84 | 27.00 | 26.89 | 0.11 | After |
| REGRESSION.HCC1395_tumor.L008 | 105 | Cycle | Base Insertion | 35732 | 1.57 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 105 | Cycle | Base Deletion | 35732 | 3.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 106 | Cycle | Base Substitution | 36036 | 63.45 | 28.00 | 27.07 | 0.93 | After |
| REGRESSION.HCC1395_tumor.L008 | 106 | Cycle | Base Insertion | 35751 | 1.84 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 106 | Cycle | Base Deletion | 35751 | 3.94 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 107 | Cycle | Base Substitution | 35799 | 65.29 | 27.00 | 27.17 | -0.17 | After |
| REGRESSION.HCC1395_tumor.L008 | 107 | Cycle | Base Insertion | 35511 | 1.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 107 | Cycle | Base Deletion | 35511 | 2.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 108 | Cycle | Base Substitution | 35741 | 77.13 | 27.00 | 26.74 | 0.26 | After |
| REGRESSION.HCC1395_tumor.L008 | 108 | Cycle | Base Insertion | 35451 | 2.02 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 108 | Cycle | Base Deletion | 35451 | 2.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 109 | Cycle | Base Substitution | 35776 | 48.20 | 28.00 | 27.19 | 0.81 | After |
| REGRESSION.HCC1395_tumor.L008 | 109 | Cycle | Base Insertion | 35462 | 2.09 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 109 | Cycle | Base Deletion | 35462 | 4.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 11 | Cycle | Base Substitution | 38747 | 39.82 | 29.00 | 27.36 | 1.64 | After |
| REGRESSION.HCC1395_tumor.L008 | 11 | Cycle | Base Insertion | 38747 | 1.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 11 | Cycle | Base Deletion | 38747 | 3.38 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 110 | Cycle | Base Substitution | 35734 | 71.69 | 27.00 | 26.79 | 0.21 | After |
| REGRESSION.HCC1395_tumor.L008 | 110 | Cycle | Base Insertion | 35380 | 1.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 110 | Cycle | Base Deletion | 35380 | 3.82 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 111 | Cycle | Base Substitution | 35746 | 72.37 | 27.00 | 26.68 | 0.32 | After |
| REGRESSION.HCC1395_tumor.L008 | 111 | Cycle | Base Insertion | 35374 | 1.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 111 | Cycle | Base Deletion | 35374 | 4.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 112 | Cycle | Base Substitution | 35582 | 68.59 | 27.00 | 26.90 | 0.10 | After |
| REGRESSION.HCC1395_tumor.L008 | 112 | Cycle | Base Insertion | 35207 | 1.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 112 | Cycle | Base Deletion | 35207 | 4.38 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 113 | Cycle | Base Substitution | 35640 | 66.96 | 27.00 | 26.79 | 0.21 | After |
| REGRESSION.HCC1395_tumor.L008 | 113 | Cycle | Base Insertion | 35265 | 0.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 113 | Cycle | Base Deletion | 35265 | 3.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 114 | Cycle | Base Substitution | 35407 | 59.29 | 27.00 | 26.86 | 0.14 | After |
| REGRESSION.HCC1395_tumor.L008 | 114 | Cycle | Base Insertion | 35044 | 1.55 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 114 | Cycle | Base Deletion | 35044 | 4.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 115 | Cycle | Base Substitution | 35247 | 67.08 | 27.00 | 26.63 | 0.37 | After |
| REGRESSION.HCC1395_tumor.L008 | 115 | Cycle | Base Insertion | 34864 | 2.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 115 | Cycle | Base Deletion | 34864 | 4.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 116 | Cycle | Base Substitution | 35169 | 77.73 | 26.00 | 26.69 | -0.69 | After |
| REGRESSION.HCC1395_tumor.L008 | 116 | Cycle | Base Insertion | 34770 | 1.47 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 116 | Cycle | Base Deletion | 34770 | 3.38 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 117 | Cycle | Base Substitution | 34990 | 73.31 | 27.00 | 26.55 | 0.45 | After |
| REGRESSION.HCC1395_tumor.L008 | 117 | Cycle | Base Insertion | 34594 | 1.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 117 | Cycle | Base Deletion | 34594 | 3.56 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 118 | Cycle | Base Substitution | 34843 | 55.93 | 27.00 | 26.68 | 0.32 | After |
| REGRESSION.HCC1395_tumor.L008 | 118 | Cycle | Base Insertion | 34482 | 2.15 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 118 | Cycle | Base Deletion | 34482 | 3.64 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 119 | Cycle | Base Substitution | 34977 | 75.76 | 27.00 | 26.70 | 0.30 | After |
| REGRESSION.HCC1395_tumor.L008 | 119 | Cycle | Base Insertion | 34609 | 0.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 119 | Cycle | Base Deletion | 34609 | 2.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 12 | Cycle | Base Substitution | 38741 | 42.49 | 29.00 | 27.77 | 1.23 | After |
| REGRESSION.HCC1395_tumor.L008 | 12 | Cycle | Base Insertion | 38741 | 1.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 12 | Cycle | Base Deletion | 38741 | 3.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 120 | Cycle | Base Substitution | 34757 | 60.65 | 27.00 | 26.85 | 0.15 | After |
| REGRESSION.HCC1395_tumor.L008 | 120 | Cycle | Base Insertion | 34403 | 0.47 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 120 | Cycle | Base Deletion | 34403 | 4.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 121 | Cycle | Base Substitution | 34831 | 83.90 | 26.00 | 26.74 | -0.74 | After |
| REGRESSION.HCC1395_tumor.L008 | 121 | Cycle | Base Insertion | 34446 | 0.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 121 | Cycle | Base Deletion | 34446 | 4.84 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 122 | Cycle | Base Substitution | 34440 | 60.28 | 27.00 | 26.56 | 0.44 | After |
| REGRESSION.HCC1395_tumor.L008 | 122 | Cycle | Base Insertion | 34044 | 0.44 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 122 | Cycle | Base Deletion | 34044 | 3.79 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 123 | Cycle | Base Substitution | 34467 | 69.40 | 27.00 | 26.54 | 0.46 | After |
| REGRESSION.HCC1395_tumor.L008 | 123 | Cycle | Base Insertion | 34079 | 1.56 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 123 | Cycle | Base Deletion | 34079 | 3.36 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 124 | Cycle | Base Substitution | 34420 | 77.91 | 26.00 | 26.55 | -0.55 | After |
| REGRESSION.HCC1395_tumor.L008 | 124 | Cycle | Base Insertion | 34029 | 0.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 124 | Cycle | Base Deletion | 34029 | 2.99 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 125 | Cycle | Base Substitution | 34387 | 72.34 | 27.00 | 26.58 | 0.42 | After |
| REGRESSION.HCC1395_tumor.L008 | 125 | Cycle | Base Insertion | 34002 | 0.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 125 | Cycle | Base Deletion | 34002 | 2.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 126 | Cycle | Base Substitution | 34250 | 82.92 | 26.00 | 26.60 | -0.60 | After |
| REGRESSION.HCC1395_tumor.L008 | 126 | Cycle | Base Insertion | 33879 | 0.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 126 | Cycle | Base Deletion | 33879 | 2.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 127 | Cycle | Base Substitution | 34132 | 62.21 | 27.00 | 26.72 | 0.28 | After |
| REGRESSION.HCC1395_tumor.L008 | 127 | Cycle | Base Insertion | 33774 | 0.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 127 | Cycle | Base Deletion | 33774 | 3.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 128 | Cycle | Base Substitution | 33985 | 74.48 | 27.00 | 26.53 | 0.47 | After |
| REGRESSION.HCC1395_tumor.L008 | 128 | Cycle | Base Insertion | 33624 | 0.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 128 | Cycle | Base Deletion | 33624 | 3.95 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 129 | Cycle | Base Substitution | 33951 | 58.79 | 27.00 | 26.61 | 0.39 | After |
| REGRESSION.HCC1395_tumor.L008 | 129 | Cycle | Base Insertion | 33586 | 0.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 129 | Cycle | Base Deletion | 33586 | 3.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 13 | Cycle | Base Substitution | 38687 | 52.32 | 28.00 | 27.25 | 0.75 | After |
| REGRESSION.HCC1395_tumor.L008 | 13 | Cycle | Base Insertion | 38687 | 1.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 13 | Cycle | Base Deletion | 38687 | 3.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 130 | Cycle | Base Substitution | 33806 | 69.25 | 27.00 | 26.54 | 0.46 | After |
| REGRESSION.HCC1395_tumor.L008 | 130 | Cycle | Base Insertion | 33427 | 0.79 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 130 | Cycle | Base Deletion | 33427 | 3.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 131 | Cycle | Base Substitution | 33886 | 76.68 | 26.00 | 26.60 | -0.60 | After |
| REGRESSION.HCC1395_tumor.L008 | 131 | Cycle | Base Insertion | 33506 | 0.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 131 | Cycle | Base Deletion | 33506 | 2.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 132 | Cycle | Base Substitution | 33744 | 78.26 | 26.00 | 26.39 | -0.39 | After |
| REGRESSION.HCC1395_tumor.L008 | 132 | Cycle | Base Insertion | 33341 | 0.84 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 132 | Cycle | Base Deletion | 33341 | 2.88 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 133 | Cycle | Base Substitution | 33540 | 80.20 | 26.00 | 26.64 | -0.64 | After |
| REGRESSION.HCC1395_tumor.L008 | 133 | Cycle | Base Insertion | 33165 | 0.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 133 | Cycle | Base Deletion | 33165 | 3.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 134 | Cycle | Base Substitution | 33417 | 65.25 | 27.00 | 26.57 | 0.43 | After |
| REGRESSION.HCC1395_tumor.L008 | 134 | Cycle | Base Insertion | 33021 | 1.44 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 134 | Cycle | Base Deletion | 33021 | 3.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 135 | Cycle | Base Substitution | 33356 | 61.25 | 27.00 | 26.33 | 0.67 | After |
| REGRESSION.HCC1395_tumor.L008 | 135 | Cycle | Base Insertion | 32928 | 1.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 135 | Cycle | Base Deletion | 32928 | 2.31 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 136 | Cycle | Base Substitution | 33197 | 70.75 | 27.00 | 26.72 | 0.28 | After |
| REGRESSION.HCC1395_tumor.L008 | 136 | Cycle | Base Insertion | 32791 | 1.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 136 | Cycle | Base Deletion | 32791 | 2.85 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 137 | Cycle | Base Substitution | 33194 | 56.47 | 27.00 | 26.49 | 0.51 | After |
| REGRESSION.HCC1395_tumor.L008 | 137 | Cycle | Base Insertion | 32779 | 0.51 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 137 | Cycle | Base Deletion | 32779 | 2.72 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 138 | Cycle | Base Substitution | 33047 | 64.36 | 27.00 | 26.57 | 0.43 | After |
| REGRESSION.HCC1395_tumor.L008 | 138 | Cycle | Base Insertion | 32645 | 0.96 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 138 | Cycle | Base Deletion | 32645 | 1.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 139 | Cycle | Base Substitution | 33025 | 67.73 | 27.00 | 26.55 | 0.45 | After |
| REGRESSION.HCC1395_tumor.L008 | 139 | Cycle | Base Insertion | 32613 | 1.57 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 139 | Cycle | Base Deletion | 32613 | 2.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 14 | Cycle | Base Substitution | 38592 | 34.10 | 29.00 | 28.16 | 0.84 | After |
| REGRESSION.HCC1395_tumor.L008 | 14 | Cycle | Base Insertion | 38592 | 3.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 14 | Cycle | Base Deletion | 38592 | 2.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 140 | Cycle | Base Substitution | 32865 | 65.61 | 27.00 | 26.31 | 0.69 | After |
| REGRESSION.HCC1395_tumor.L008 | 140 | Cycle | Base Insertion | 32450 | 0.57 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 140 | Cycle | Base Deletion | 32450 | 1.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 141 | Cycle | Base Substitution | 32891 | 59.83 | 27.00 | 26.67 | 0.33 | After |
| REGRESSION.HCC1395_tumor.L008 | 141 | Cycle | Base Insertion | 32461 | 0.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 141 | Cycle | Base Deletion | 32461 | 2.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 142 | Cycle | Base Substitution | 32736 | 76.37 | 26.00 | 26.64 | -0.64 | After |
| REGRESSION.HCC1395_tumor.L008 | 142 | Cycle | Base Insertion | 32287 | 0.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 142 | Cycle | Base Deletion | 32287 | 1.88 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 143 | Cycle | Base Substitution | 32625 | 76.80 | 26.00 | 26.32 | -0.32 | After |
| REGRESSION.HCC1395_tumor.L008 | 143 | Cycle | Base Insertion | 32165 | 0.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 143 | Cycle | Base Deletion | 32165 | 1.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 144 | Cycle | Base Substitution | 32441 | 74.95 | 26.00 | 26.56 | -0.56 | After |
| REGRESSION.HCC1395_tumor.L008 | 144 | Cycle | Base Insertion | 31956 | 0.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 144 | Cycle | Base Deletion | 31956 | 1.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 145 | Cycle | Base Substitution | 32432 | 71.89 | 26.00 | 26.44 | -0.44 | After |
| REGRESSION.HCC1395_tumor.L008 | 145 | Cycle | Base Insertion | 31931 | 0.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 145 | Cycle | Base Deletion | 31931 | 0.84 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 146 | Cycle | Base Substitution | 32326 | 66.70 | 27.00 | 26.66 | 0.34 | After |
| REGRESSION.HCC1395_tumor.L008 | 146 | Cycle | Base Insertion | 31857 | 0.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 146 | Cycle | Base Deletion | 31857 | 0.46 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 147 | Cycle | Base Substitution | 32048 | 72.19 | 26.00 | 26.51 | -0.51 | After |
| REGRESSION.HCC1395_tumor.L008 | 148 | Cycle | Base Substitution | 31936 | 90.88 | 26.00 | 26.58 | -0.58 | After |
| REGRESSION.HCC1395_tumor.L008 | 149 | Cycle | Base Substitution | 31814 | 81.24 | 26.00 | 26.42 | -0.42 | After |
| REGRESSION.HCC1395_tumor.L008 | 15 | Cycle | Base Substitution | 38693 | 45.97 | 28.00 | 27.67 | 0.33 | After |
| REGRESSION.HCC1395_tumor.L008 | 15 | Cycle | Base Insertion | 38693 | 3.97 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 15 | Cycle | Base Deletion | 38693 | 2.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 150 | Cycle | Base Substitution | 31769 | 83.20 | 26.00 | 26.55 | -0.55 | After |
| REGRESSION.HCC1395_tumor.L008 | 16 | Cycle | Base Substitution | 38523 | 25.81 | 30.00 | 28.68 | 1.32 | After |
| REGRESSION.HCC1395_tumor.L008 | 16 | Cycle | Base Insertion | 38523 | 2.07 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 16 | Cycle | Base Deletion | 38523 | 3.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 17 | Cycle | Base Substitution | 38582 | 40.06 | 29.00 | 28.50 | 0.50 | After |
| REGRESSION.HCC1395_tumor.L008 | 17 | Cycle | Base Insertion | 38582 | 1.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 17 | Cycle | Base Deletion | 38582 | 3.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 18 | Cycle | Base Substitution | 38599 | 23.64 | 30.00 | 28.92 | 1.08 | After |
| REGRESSION.HCC1395_tumor.L008 | 18 | Cycle | Base Insertion | 38598 | 2.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 18 | Cycle | Base Deletion | 38598 | 4.28 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 19 | Cycle | Base Substitution | 38617 | 31.04 | 30.00 | 28.71 | 1.29 | After |
| REGRESSION.HCC1395_tumor.L008 | 19 | Cycle | Base Insertion | 38616 | 2.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 19 | Cycle | Base Deletion | 38616 | 3.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 2 | Cycle | Base Substitution | 38826 | 75.82 | 27.00 | 27.59 | -0.59 | After |
| REGRESSION.HCC1395_tumor.L008 | 20 | Cycle | Base Substitution | 38575 | 38.51 | 29.00 | 28.60 | 0.40 | After |
| REGRESSION.HCC1395_tumor.L008 | 20 | Cycle | Base Insertion | 38574 | 2.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 20 | Cycle | Base Deletion | 38574 | 3.24 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 21 | Cycle | Base Substitution | 38518 | 27.72 | 30.00 | 28.53 | 1.47 | After |
| REGRESSION.HCC1395_tumor.L008 | 21 | Cycle | Base Insertion | 38517 | 2.66 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 21 | Cycle | Base Deletion | 38517 | 4.37 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 22 | Cycle | Base Substitution | 38695 | 21.78 | 30.00 | 28.75 | 1.25 | After |
| REGRESSION.HCC1395_tumor.L008 | 22 | Cycle | Base Insertion | 38695 | 3.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 22 | Cycle | Base Deletion | 38695 | 3.23 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 23 | Cycle | Base Substitution | 38458 | 29.91 | 30.00 | 28.59 | 1.41 | After |
| REGRESSION.HCC1395_tumor.L008 | 23 | Cycle | Base Insertion | 38458 | 1.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 23 | Cycle | Base Deletion | 38458 | 3.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 24 | Cycle | Base Substitution | 38563 | 30.56 | 30.00 | 28.76 | 1.24 | After |
| REGRESSION.HCC1395_tumor.L008 | 24 | Cycle | Base Insertion | 38562 | 1.99 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 24 | Cycle | Base Deletion | 38562 | 4.17 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 25 | Cycle | Base Substitution | 38469 | 34.25 | 29.00 | 28.43 | 0.57 | After |
| REGRESSION.HCC1395_tumor.L008 | 25 | Cycle | Base Insertion | 38468 | 2.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 25 | Cycle | Base Deletion | 38468 | 3.81 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 26 | Cycle | Base Substitution | 38490 | 50.02 | 28.00 | 27.78 | 0.22 | After |
| REGRESSION.HCC1395_tumor.L008 | 26 | Cycle | Base Insertion | 38489 | 3.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 26 | Cycle | Base Deletion | 38489 | 3.95 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 27 | Cycle | Base Substitution | 38587 | 35.98 | 29.00 | 27.56 | 1.44 | After |
| REGRESSION.HCC1395_tumor.L008 | 27 | Cycle | Base Insertion | 38583 | 1.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 27 | Cycle | Base Deletion | 38583 | 4.96 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 28 | Cycle | Base Substitution | 38551 | 42.05 | 29.00 | 28.20 | 0.80 | After |
| REGRESSION.HCC1395_tumor.L008 | 28 | Cycle | Base Insertion | 38548 | 1.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 28 | Cycle | Base Deletion | 38548 | 4.46 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 29 | Cycle | Base Substitution | 38533 | 34.91 | 29.00 | 27.79 | 1.21 | After |
| REGRESSION.HCC1395_tumor.L008 | 29 | Cycle | Base Insertion | 38528 | 3.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 29 | Cycle | Base Deletion | 38528 | 4.94 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 3 | Cycle | Base Substitution | 38862 | 105.45 | 26.00 | 27.21 | -1.21 | After |
| REGRESSION.HCC1395_tumor.L008 | 30 | Cycle | Base Substitution | 38581 | 44.55 | 28.00 | 27.87 | 0.13 | After |
| REGRESSION.HCC1395_tumor.L008 | 30 | Cycle | Base Insertion | 38576 | 1.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 30 | Cycle | Base Deletion | 38576 | 5.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 31 | Cycle | Base Substitution | 38380 | 32.42 | 29.00 | 27.87 | 1.13 | After |
| REGRESSION.HCC1395_tumor.L008 | 31 | Cycle | Base Insertion | 38377 | 1.95 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 31 | Cycle | Base Deletion | 38377 | 5.34 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 32 | Cycle | Base Substitution | 38514 | 58.53 | 28.00 | 27.80 | 0.20 | After |
| REGRESSION.HCC1395_tumor.L008 | 32 | Cycle | Base Insertion | 38509 | 3.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 32 | Cycle | Base Deletion | 38509 | 5.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 33 | Cycle | Base Substitution | 38485 | 33.48 | 29.00 | 27.71 | 1.29 | After |
| REGRESSION.HCC1395_tumor.L008 | 33 | Cycle | Base Insertion | 38483 | 1.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 33 | Cycle | Base Deletion | 38483 | 4.61 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 34 | Cycle | Base Substitution | 38421 | 41.50 | 29.00 | 27.59 | 1.41 | After |
| REGRESSION.HCC1395_tumor.L008 | 34 | Cycle | Base Insertion | 38416 | 1.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 34 | Cycle | Base Deletion | 38416 | 3.88 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 35 | Cycle | Base Substitution | 38473 | 45.09 | 28.00 | 27.81 | 0.19 | After |
| REGRESSION.HCC1395_tumor.L008 | 35 | Cycle | Base Insertion | 38469 | 1.85 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 35 | Cycle | Base Deletion | 38469 | 4.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 36 | Cycle | Base Substitution | 38481 | 49.89 | 28.00 | 27.78 | 0.22 | After |
| REGRESSION.HCC1395_tumor.L008 | 36 | Cycle | Base Insertion | 38479 | 1.62 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 36 | Cycle | Base Deletion | 38479 | 3.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 37 | Cycle | Base Substitution | 38363 | 37.72 | 29.00 | 27.92 | 1.08 | After |
| REGRESSION.HCC1395_tumor.L008 | 37 | Cycle | Base Insertion | 38361 | 1.50 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 37 | Cycle | Base Deletion | 38361 | 3.18 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 38 | Cycle | Base Substitution | 38427 | 42.56 | 29.00 | 27.95 | 1.05 | After |
| REGRESSION.HCC1395_tumor.L008 | 38 | Cycle | Base Insertion | 38422 | 1.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 38 | Cycle | Base Deletion | 38422 | 4.19 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 39 | Cycle | Base Substitution | 38443 | 47.18 | 28.00 | 27.65 | 0.35 | After |
| REGRESSION.HCC1395_tumor.L008 | 39 | Cycle | Base Insertion | 38440 | 1.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 39 | Cycle | Base Deletion | 38440 | 4.51 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 4 | Cycle | Base Substitution | 38936 | 75.36 | 27.00 | 27.24 | -0.24 | After |
| REGRESSION.HCC1395_tumor.L008 | 40 | Cycle | Base Substitution | 38444 | 48.14 | 28.00 | 27.84 | 0.16 | After |
| REGRESSION.HCC1395_tumor.L008 | 40 | Cycle | Base Insertion | 38441 | 1.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 40 | Cycle | Base Deletion | 38441 | 4.37 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 41 | Cycle | Base Substitution | 38461 | 46.89 | 28.00 | 27.78 | 0.22 | After |
| REGRESSION.HCC1395_tumor.L008 | 41 | Cycle | Base Insertion | 38456 | 3.10 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 41 | Cycle | Base Deletion | 38456 | 4.70 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 42 | Cycle | Base Substitution | 38373 | 48.06 | 28.00 | 27.55 | 0.45 | After |
| REGRESSION.HCC1395_tumor.L008 | 42 | Cycle | Base Insertion | 38372 | 2.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 42 | Cycle | Base Deletion | 38372 | 4.42 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 43 | Cycle | Base Substitution | 38454 | 35.60 | 29.00 | 28.25 | 0.75 | After |
| REGRESSION.HCC1395_tumor.L008 | 43 | Cycle | Base Insertion | 38453 | 2.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 43 | Cycle | Base Deletion | 38453 | 4.74 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 44 | Cycle | Base Substitution | 38464 | 48.59 | 29.00 | 28.05 | 0.95 | After |
| REGRESSION.HCC1395_tumor.L008 | 44 | Cycle | Base Insertion | 38460 | 1.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 44 | Cycle | Base Deletion | 38460 | 4.73 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 45 | Cycle | Base Substitution | 38370 | 43.05 | 29.00 | 28.25 | 0.75 | After |
| REGRESSION.HCC1395_tumor.L008 | 45 | Cycle | Base Insertion | 38364 | 2.54 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 45 | Cycle | Base Deletion | 38364 | 4.76 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 46 | Cycle | Base Substitution | 38365 | 37.27 | 29.00 | 28.20 | 0.80 | After |
| REGRESSION.HCC1395_tumor.L008 | 46 | Cycle | Base Insertion | 38355 | 2.99 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 46 | Cycle | Base Deletion | 38355 | 4.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 47 | Cycle | Base Substitution | 38290 | 45.87 | 28.00 | 27.70 | 0.30 | After |
| REGRESSION.HCC1395_tumor.L008 | 47 | Cycle | Base Insertion | 38279 | 2.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 47 | Cycle | Base Deletion | 38279 | 4.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 48 | Cycle | Base Substitution | 38318 | 55.26 | 28.00 | 27.76 | 0.24 | After |
| REGRESSION.HCC1395_tumor.L008 | 48 | Cycle | Base Insertion | 38311 | 2.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 48 | Cycle | Base Deletion | 38311 | 4.80 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 49 | Cycle | Base Substitution | 38367 | 49.08 | 28.00 | 27.45 | 0.55 | After |
| REGRESSION.HCC1395_tumor.L008 | 49 | Cycle | Base Insertion | 38356 | 2.84 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 49 | Cycle | Base Deletion | 38356 | 4.78 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 5 | Cycle | Base Substitution | 38855 | 47.25 | 28.00 | 27.92 | 0.08 | After |
| REGRESSION.HCC1395_tumor.L008 | 5 | Cycle | Base Insertion | 38855 | 0.85 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 5 | Cycle | Base Deletion | 38855 | 0.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 50 | Cycle | Base Substitution | 38364 | 46.49 | 28.00 | 27.79 | 0.21 | After |
| REGRESSION.HCC1395_tumor.L008 | 50 | Cycle | Base Insertion | 38348 | 1.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 50 | Cycle | Base Deletion | 38348 | 4.30 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 51 | Cycle | Base Substitution | 38178 | 47.61 | 29.00 | 28.27 | 0.73 | After |
| REGRESSION.HCC1395_tumor.L008 | 51 | Cycle | Base Insertion | 38155 | 1.69 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 51 | Cycle | Base Deletion | 38155 | 4.77 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 52 | Cycle | Base Substitution | 38258 | 42.36 | 29.00 | 27.78 | 1.22 | After |
| REGRESSION.HCC1395_tumor.L008 | 52 | Cycle | Base Insertion | 38229 | 2.03 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 52 | Cycle | Base Deletion | 38229 | 4.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 53 | Cycle | Base Substitution | 38229 | 38.30 | 29.00 | 27.70 | 1.30 | After |
| REGRESSION.HCC1395_tumor.L008 | 53 | Cycle | Base Insertion | 38202 | 2.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 53 | Cycle | Base Deletion | 38202 | 4.47 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 54 | Cycle | Base Substitution | 38244 | 52.53 | 28.00 | 27.27 | 0.73 | After |
| REGRESSION.HCC1395_tumor.L008 | 54 | Cycle | Base Insertion | 38215 | 2.09 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 54 | Cycle | Base Deletion | 38215 | 4.30 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 55 | Cycle | Base Substitution | 38150 | 29.36 | 29.00 | 27.74 | 1.26 | After |
| REGRESSION.HCC1395_tumor.L008 | 55 | Cycle | Base Insertion | 38113 | 2.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 55 | Cycle | Base Deletion | 38113 | 4.46 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 56 | Cycle | Base Substitution | 38346 | 40.98 | 29.00 | 27.61 | 1.39 | After |
| REGRESSION.HCC1395_tumor.L008 | 56 | Cycle | Base Insertion | 38303 | 0.98 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 56 | Cycle | Base Deletion | 38303 | 4.95 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 57 | Cycle | Base Substitution | 38155 | 47.34 | 28.00 | 27.50 | 0.50 | After |
| REGRESSION.HCC1395_tumor.L008 | 57 | Cycle | Base Insertion | 38114 | 0.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 57 | Cycle | Base Deletion | 38114 | 5.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 58 | Cycle | Base Substitution | 38261 | 43.46 | 29.00 | 27.62 | 1.38 | After |
| REGRESSION.HCC1395_tumor.L008 | 58 | Cycle | Base Insertion | 38208 | 1.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 58 | Cycle | Base Deletion | 38208 | 4.09 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 59 | Cycle | Base Substitution | 38208 | 39.79 | 29.00 | 27.73 | 1.27 | After |
| REGRESSION.HCC1395_tumor.L008 | 59 | Cycle | Base Insertion | 38163 | 0.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 59 | Cycle | Base Deletion | 38163 | 4.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 6 | Cycle | Base Substitution | 38798 | 47.72 | 28.00 | 27.78 | 0.22 | After |
| REGRESSION.HCC1395_tumor.L008 | 6 | Cycle | Base Insertion | 38798 | 0.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 6 | Cycle | Base Deletion | 38798 | 1.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 60 | Cycle | Base Substitution | 38094 | 54.82 | 28.00 | 27.54 | 0.46 | After |
| REGRESSION.HCC1395_tumor.L008 | 60 | Cycle | Base Insertion | 38043 | 1.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 60 | Cycle | Base Deletion | 38043 | 3.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 61 | Cycle | Base Substitution | 38170 | 47.01 | 28.00 | 27.55 | 0.45 | After |
| REGRESSION.HCC1395_tumor.L008 | 61 | Cycle | Base Insertion | 38104 | 1.06 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 61 | Cycle | Base Deletion | 38104 | 3.43 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 62 | Cycle | Base Substitution | 38057 | 63.61 | 28.00 | 27.43 | 0.57 | After |
| REGRESSION.HCC1395_tumor.L008 | 62 | Cycle | Base Insertion | 37991 | 1.44 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 62 | Cycle | Base Deletion | 37991 | 3.46 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 63 | Cycle | Base Substitution | 38067 | 59.93 | 28.00 | 27.42 | 0.58 | After |
| REGRESSION.HCC1395_tumor.L008 | 63 | Cycle | Base Insertion | 37985 | 1.37 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 63 | Cycle | Base Deletion | 37985 | 3.45 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 64 | Cycle | Base Substitution | 38022 | 52.63 | 28.00 | 27.67 | 0.33 | After |
| REGRESSION.HCC1395_tumor.L008 | 64 | Cycle | Base Insertion | 37932 | 2.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 64 | Cycle | Base Deletion | 37932 | 3.61 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 65 | Cycle | Base Substitution | 38078 | 40.28 | 29.00 | 27.58 | 1.42 | After |
| REGRESSION.HCC1395_tumor.L008 | 65 | Cycle | Base Insertion | 37990 | 1.77 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 65 | Cycle | Base Deletion | 37990 | 3.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 66 | Cycle | Base Substitution | 37902 | 43.59 | 28.00 | 27.93 | 0.07 | After |
| REGRESSION.HCC1395_tumor.L008 | 66 | Cycle | Base Insertion | 37804 | 1.67 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 66 | Cycle | Base Deletion | 37804 | 4.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 67 | Cycle | Base Substitution | 37947 | 55.07 | 28.00 | 27.45 | 0.55 | After |
| REGRESSION.HCC1395_tumor.L008 | 67 | Cycle | Base Insertion | 37857 | 1.61 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 67 | Cycle | Base Deletion | 37857 | 3.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 68 | Cycle | Base Substitution | 37950 | 72.80 | 27.00 | 27.46 | -0.46 | After |
| REGRESSION.HCC1395_tumor.L008 | 68 | Cycle | Base Insertion | 37856 | 1.61 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 68 | Cycle | Base Deletion | 37856 | 3.60 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 69 | Cycle | Base Substitution | 37972 | 52.25 | 28.00 | 27.51 | 0.49 | After |
| REGRESSION.HCC1395_tumor.L008 | 69 | Cycle | Base Insertion | 37880 | 1.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 69 | Cycle | Base Deletion | 37880 | 4.13 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 7 | Cycle | Base Substitution | 38698 | 41.57 | 29.00 | 27.72 | 1.28 | After |
| REGRESSION.HCC1395_tumor.L008 | 7 | Cycle | Base Insertion | 38698 | 0.90 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 7 | Cycle | Base Deletion | 38698 | 1.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 70 | Cycle | Base Substitution | 37880 | 38.27 | 29.00 | 28.06 | 0.94 | After |
| REGRESSION.HCC1395_tumor.L008 | 70 | Cycle | Base Insertion | 37779 | 1.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 70 | Cycle | Base Deletion | 37779 | 4.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 71 | Cycle | Base Substitution | 37947 | 39.92 | 29.00 | 27.65 | 1.35 | After |
| REGRESSION.HCC1395_tumor.L008 | 71 | Cycle | Base Insertion | 37828 | 1.94 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 71 | Cycle | Base Deletion | 37828 | 3.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 72 | Cycle | Base Substitution | 37827 | 54.91 | 28.00 | 27.49 | 0.51 | After |
| REGRESSION.HCC1395_tumor.L008 | 72 | Cycle | Base Insertion | 37704 | 1.56 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 72 | Cycle | Base Deletion | 37704 | 4.40 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 73 | Cycle | Base Substitution | 37914 | 63.44 | 28.00 | 27.26 | 0.74 | After |
| REGRESSION.HCC1395_tumor.L008 | 73 | Cycle | Base Insertion | 37780 | 2.26 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 73 | Cycle | Base Deletion | 37780 | 5.17 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 74 | Cycle | Base Substitution | 37725 | 62.87 | 28.00 | 27.17 | 0.83 | After |
| REGRESSION.HCC1395_tumor.L008 | 74 | Cycle | Base Insertion | 37584 | 1.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 74 | Cycle | Base Deletion | 37584 | 3.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 75 | Cycle | Base Substitution | 37757 | 55.67 | 28.00 | 27.62 | 0.38 | After |
| REGRESSION.HCC1395_tumor.L008 | 75 | Cycle | Base Insertion | 37610 | 1.86 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 75 | Cycle | Base Deletion | 37610 | 3.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 76 | Cycle | Base Substitution | 37721 | 56.40 | 28.00 | 27.22 | 0.78 | After |
| REGRESSION.HCC1395_tumor.L008 | 76 | Cycle | Base Insertion | 37560 | 1.91 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 76 | Cycle | Base Deletion | 37560 | 2.77 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 77 | Cycle | Base Substitution | 37635 | 64.93 | 28.00 | 27.32 | 0.68 | After |
| REGRESSION.HCC1395_tumor.L008 | 77 | Cycle | Base Insertion | 37481 | 2.64 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 77 | Cycle | Base Deletion | 37481 | 3.33 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 78 | Cycle | Base Substitution | 37593 | 54.22 | 28.00 | 27.33 | 0.67 | After |
| REGRESSION.HCC1395_tumor.L008 | 78 | Cycle | Base Insertion | 37434 | 1.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 78 | Cycle | Base Deletion | 37434 | 3.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 79 | Cycle | Base Substitution | 37540 | 66.98 | 27.00 | 27.36 | -0.36 | After |
| REGRESSION.HCC1395_tumor.L008 | 79 | Cycle | Base Insertion | 37362 | 1.58 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 79 | Cycle | Base Deletion | 37362 | 2.92 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 8 | Cycle | Base Substitution | 38696 | 47.31 | 28.00 | 27.48 | 0.52 | After |
| REGRESSION.HCC1395_tumor.L008 | 8 | Cycle | Base Insertion | 38696 | 0.93 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 8 | Cycle | Base Deletion | 38696 | 2.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 80 | Cycle | Base Substitution | 37487 | 60.89 | 28.00 | 27.01 | 0.99 | After |
| REGRESSION.HCC1395_tumor.L008 | 80 | Cycle | Base Insertion | 37309 | 1.75 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 80 | Cycle | Base Deletion | 37309 | 2.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 81 | Cycle | Base Substitution | 37473 | 56.85 | 28.00 | 27.12 | 0.88 | After |
| REGRESSION.HCC1395_tumor.L008 | 81 | Cycle | Base Insertion | 37259 | 3.59 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 81 | Cycle | Base Deletion | 37259 | 3.18 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 82 | Cycle | Base Substitution | 37375 | 56.58 | 28.00 | 27.30 | 0.70 | After |
| REGRESSION.HCC1395_tumor.L008 | 82 | Cycle | Base Insertion | 37176 | 2.11 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 82 | Cycle | Base Deletion | 37176 | 4.02 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 83 | Cycle | Base Substitution | 37305 | 53.91 | 28.00 | 27.40 | 0.60 | After |
| REGRESSION.HCC1395_tumor.L008 | 83 | Cycle | Base Insertion | 37112 | 1.04 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 83 | Cycle | Base Deletion | 37112 | 3.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 84 | Cycle | Base Substitution | 37242 | 68.87 | 27.00 | 27.08 | -0.08 | After |
| REGRESSION.HCC1395_tumor.L008 | 84 | Cycle | Base Insertion | 37038 | 1.83 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 84 | Cycle | Base Deletion | 37038 | 4.35 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 85 | Cycle | Base Substitution | 37306 | 59.88 | 28.00 | 27.13 | 0.87 | After |
| REGRESSION.HCC1395_tumor.L008 | 85 | Cycle | Base Insertion | 37109 | 1.14 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 85 | Cycle | Base Deletion | 37109 | 4.07 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 86 | Cycle | Base Substitution | 37206 | 55.05 | 28.00 | 26.77 | 1.23 | After |
| REGRESSION.HCC1395_tumor.L008 | 86 | Cycle | Base Insertion | 36984 | 1.16 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 86 | Cycle | Base Deletion | 36984 | 4.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 87 | Cycle | Base Substitution | 37214 | 50.05 | 28.00 | 27.25 | 0.75 | After |
| REGRESSION.HCC1395_tumor.L008 | 87 | Cycle | Base Insertion | 37007 | 1.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 87 | Cycle | Base Deletion | 37007 | 4.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 88 | Cycle | Base Substitution | 37021 | 75.05 | 27.00 | 26.94 | 0.06 | After |
| REGRESSION.HCC1395_tumor.L008 | 88 | Cycle | Base Insertion | 36809 | 1.89 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 88 | Cycle | Base Deletion | 36809 | 4.02 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 89 | Cycle | Base Substitution | 36984 | 54.17 | 28.00 | 27.01 | 0.99 | After |
| REGRESSION.HCC1395_tumor.L008 | 89 | Cycle | Base Insertion | 36777 | 2.12 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 89 | Cycle | Base Deletion | 36777 | 4.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 9 | Cycle | Base Substitution | 38736 | 44.84 | 29.00 | 27.73 | 1.27 | After |
| REGRESSION.HCC1395_tumor.L008 | 9 | Cycle | Base Insertion | 38736 | 0.81 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 9 | Cycle | Base Deletion | 38736 | 3.49 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 90 | Cycle | Base Substitution | 37020 | 54.60 | 28.00 | 27.20 | 0.80 | After |
| REGRESSION.HCC1395_tumor.L008 | 90 | Cycle | Base Insertion | 36796 | 1.64 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 90 | Cycle | Base Deletion | 36796 | 4.20 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 91 | Cycle | Base Substitution | 37131 | 62.14 | 28.00 | 27.49 | 0.51 | After |
| REGRESSION.HCC1395_tumor.L008 | 91 | Cycle | Base Insertion | 36906 | 1.02 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 91 | Cycle | Base Deletion | 36906 | 3.88 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 92 | Cycle | Base Substitution | 36917 | 74.22 | 27.00 | 27.06 | -0.06 | After |
| REGRESSION.HCC1395_tumor.L008 | 92 | Cycle | Base Insertion | 36694 | 0.86 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 92 | Cycle | Base Deletion | 36694 | 4.27 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 93 | Cycle | Base Substitution | 36865 | 52.25 | 28.00 | 27.09 | 0.91 | After |
| REGRESSION.HCC1395_tumor.L008 | 93 | Cycle | Base Insertion | 36611 | 0.63 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 93 | Cycle | Base Deletion | 36611 | 3.88 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 94 | Cycle | Base Substitution | 36791 | 56.25 | 27.00 | 26.93 | 0.07 | After |
| REGRESSION.HCC1395_tumor.L008 | 94 | Cycle | Base Insertion | 36525 | 1.32 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 94 | Cycle | Base Deletion | 36525 | 4.68 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 95 | Cycle | Base Substitution | 36810 | 56.98 | 28.00 | 27.22 | 0.78 | After |
| REGRESSION.HCC1395_tumor.L008 | 95 | Cycle | Base Insertion | 36523 | 1.52 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 95 | Cycle | Base Deletion | 36523 | 4.08 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 96 | Cycle | Base Substitution | 36720 | 65.21 | 27.00 | 27.10 | -0.10 | After |
| REGRESSION.HCC1395_tumor.L008 | 96 | Cycle | Base Insertion | 36436 | 1.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 96 | Cycle | Base Deletion | 36436 | 4.22 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 97 | Cycle | Base Substitution | 36634 | 64.22 | 28.00 | 27.02 | 0.98 | After |
| REGRESSION.HCC1395_tumor.L008 | 97 | Cycle | Base Insertion | 36341 | 1.39 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 97 | Cycle | Base Deletion | 36341 | 3.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 98 | Cycle | Base Substitution | 36560 | 64.65 | 27.00 | 26.87 | 0.13 | After |
| REGRESSION.HCC1395_tumor.L008 | 98 | Cycle | Base Insertion | 36288 | 1.25 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 98 | Cycle | Base Deletion | 36288 | 3.53 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 99 | Cycle | Base Substitution | 36297 | 61.29 | 28.00 | 27.09 | 0.91 | After |
| REGRESSION.HCC1395_tumor.L008 | 99 | Cycle | Base Insertion | 36033 | 1.41 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 99 | Cycle | Base Deletion | 36033 | 3.87 | 45.00 | 45.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 10 | QualityScore | Base Substitution | 25817 | 2703.69 | 10.00 | 10.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 11 | QualityScore | Base Substitution | 9320 | 666.82 | 11.00 | 11.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 12 | QualityScore | Base Substitution | 28017 | 1699.55 | 12.00 | 12.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 13 | QualityScore | Base Substitution | 12484 | 251.74 | 16.00 | 13.00 | 3.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 14 | QualityScore | Base Substitution | 12216 | 180.75 | 17.00 | 14.00 | 3.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 15 | QualityScore | Base Substitution | 17499 | 13.32 | 21.00 | 15.00 | 6.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 16 | QualityScore | Base Substitution | 7760 | 0.33 | 20.00 | 16.00 | 4.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 17 | QualityScore | Base Substitution | 14222 | 0.87 | 22.00 | 17.00 | 5.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 21 | QualityScore | Base Substitution | 98 | 0.00 | 21.00 | 21.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 22 | QualityScore | Base Substitution | 39105 | 228.29 | 22.00 | 22.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 23 | QualityScore | Base Substitution | 74322 | 431.18 | 22.00 | 23.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 24 | QualityScore | Base Substitution | 120544 | 417.96 | 25.00 | 24.00 | 1.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 25 | QualityScore | Base Substitution | 110480 | 193.93 | 27.00 | 25.00 | 2.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 28 | QualityScore | Base Substitution | 8195 | 0.72 | 29.00 | 28.00 | 1.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 29 | QualityScore | Base Substitution | 60065 | 101.67 | 28.00 | 29.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 30 | QualityScore | Base Substitution | 2574900 | 1624.58 | 32.00 | 30.00 | 2.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 31 | QualityScore | Base Substitution | 2728435 | 1107.52 | 34.00 | 31.00 | 3.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 32 | QualityScore | Base Substitution | 4595913 | 1105.58 | 36.00 | 32.00 | 4.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 33 | QualityScore | Base Substitution | 495366 | 81.78 | 36.00 | 33.00 | 3.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 45 | QualityScore | Base Insertion | 10990089 | 458.83 | 44.00 | 45.00 | -1.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 45 | QualityScore | Base Deletion | 10990089 | 1015.37 | 41.00 | 45.00 | -4.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 8 | QualityScore | Base Substitution | 2387 | 424.35 | 8.00 | 8.00 | 0.00 | After |
| REGRESSION.HCC1395_tumor.L008 | 9 | QualityScore | Base Substitution | 52944 | 7554.85 | 8.00 | 9.00 | -1.00 | After |
16414 rows